mm9_v1_chr1_+_45401303_45401332	18.3431	NKX3-2.p2	AK159868|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr1_+_45401659_45401671	17.6123	NKX3-2.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr6_+_4484651_4484672	16.8355	NKX3-2.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr15_+_54402988_54403054	10.4934	NKX3-2.p2	AK035986|Mal2|105853|mal, T-cell differentiation protein 2	BC113154|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr1_-_45559866_45559893	9.96916	NKX3-2.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr1_-_45559904_45559916	9.6773	NKX3-2.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_-_45743950_45744018	9.6474	NKX3-2.p2	BC003795|Tagln|21345|transgelin	AK002880|Tagln|21345|transgelin	L41154|Tagln|21345|transgelin	U36588|Tagln|21345|transgelin	AK077235|Tagln|21345|transgelin
mm9_v1_chrX_+_10062237_10062294	9.16232	NKX3-2.p2	NM_019634|Tspan7|21912|tetraspanin 7	AK195558|Tspan7|21912|tetraspanin 7	AK147306|Tspan7|21912|tetraspanin 7	AK147404|Tspan7|21912|tetraspanin 7	AK004776|Tspan7|21912|tetraspanin 7	BC058603|Tspan7|21912|tetraspanin 7	AF052492|Tspan7|21912|tetraspanin 7	BC050153|Tspan7|21912|tetraspanin 7	D26483|Tspan7|21912|tetraspanin 7
mm9_v1_chr1_-_170362298_170362315	8.95945	NKX3-2.p2	AK045252|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144346|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144446|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr9_-_45744036_45744140	8.82821	NKX3-2.p2	NM_011526|Tagln|21345|transgelin
mm9_v1_chr19_-_34329804_34329828	8.35425	NKX3-2.p2	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr19_+_27291897_27291921	8.3401	NKX3-2.p2	U06670|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr8_+_11443165_11443220	7.96888	NKX3-2.p2	BC013560|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr3_+_121426422_121426632	7.86917	NKX3-2.p2	BC024886|F3|14066|coagulation factor III	NM_010171|F3|14066|coagulation factor III	BC016397|F3|14066|coagulation factor III	M26071|F3|14066|coagulation factor III	AK137642|F3|14066|coagulation factor III	AK144872|F3|14066|coagulation factor III	M57896|F3|14066|coagulation factor III	CT010367|F3|14066|coagulation factor III
mm9_v1_chr9_-_66880619_66880631	7.81381	NKX3-2.p2	AK190148|Tpm1|22003|tropomyosin 1, alpha	AK083087|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr8_-_64381465_64381486	7.80476	NKX3-2.p2	AK052489|Palld|72333|palladin, cytoskeletal associated protein	NM_001081390|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr19_+_27292039_27292085	7.79593	NKX3-2.p2	BC013622|Vldlr|22359|very low density lipoprotein receptor	L33417|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr15_-_78236262_78236306	7.42851	NKX3-2.p2	CT010210|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	U35741|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	BC005644|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	NM_009437|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	AK003953|Tst|22117|thiosulfate sulfurtransferase, mitochondrial
mm9_v1_chr18_-_46887869_46888063	7.28452	NKX3-2.p2	BC013638|Cdo1|12583|cysteine dioxygenase 1, cytosolic	BC020375|Cdo1|12583|cysteine dioxygenase 1, cytosolic	NM_033037|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK004249|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK011032|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK149582|Cdo1|12583|cysteine dioxygenase 1, cytosolic
mm9_v1_chr15_+_75427044_75427088	7.27577	NKX3-2.p2	AK003305|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AB095543|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AK050431|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	BC061225|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	NM_026730|Gpihbp1|68453|GPI-anchored HDL-binding protein 1
mm9_v1_chr16_-_85080242_85080258	7.17487	NKX3-2.p2	BC005490|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr18_+_37979199_37979219	7.09954	NKX3-2.p2	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr11_+_54716354_54716435	6.98038	NKX3-2.p2	NM_001083929|Gpx3|14778|glutathione peroxidase 3	AK002219|Gpx3|14778|glutathione peroxidase 3	AK002262|Gpx3|14778|glutathione peroxidase 3	AK004942|Gpx3|14778|glutathione peroxidase 3	NM_008161|Gpx3|14778|glutathione peroxidase 3	AK146760|Gpx3|14778|glutathione peroxidase 3	BC037027|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr6_-_124586102_124586102	6.959	NKX3-2.p2	AF459020|Gm5077|317677|predicted gene 5077	NM_173864|Gm5077|317677|predicted gene 5077
mm9_v1_chr18_+_37979242_37979328	6.92029	NKX3-2.p2	BC138677|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464160|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AY013813|Pcdhgc5|93708|protocadherin gamma subfamily C, 5
mm9_v1_chr17_-_57367499_57367520	6.83844	NKX3-2.p2	BC043338|C3|12266|complement component 3	K02782|C3|12266|complement component 3
mm9_v1_chr15_+_54402914_54402981	6.8195	NKX3-2.p2	NM_178920|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr11_+_54716439_54716452	6.75735	NKX3-2.p2	BC037134|Gpx3|14778|glutathione peroxidase 3	BC049235|Gpx3|14778|glutathione peroxidase 3	BC003339|Gpx3|14778|glutathione peroxidase 3	BC061950|Gpx3|14778|glutathione peroxidase 3	U13705|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr6_+_4455686_4455760	6.63624	NKX3-2.p2	AK159212|Col1a2|12843|collagen, type I, alpha 2	AK161017|Col1a2|12843|collagen, type I, alpha 2	NM_007743|Col1a2|12843|collagen, type I, alpha 2	AK160098|Col1a2|12843|collagen, type I, alpha 2	AK160946|Col1a2|12843|collagen, type I, alpha 2	AK159578|Col1a2|12843|collagen, type I, alpha 2	AK031577|Col1a2|12843|collagen, type I, alpha 2	AK132496|Col1a2|12843|collagen, type I, alpha 2	AK157724|Col1a2|12843|collagen, type I, alpha 2	AK159408|Col1a2|12843|collagen, type I, alpha 2	AK160787|Col1a2|12843|collagen, type I, alpha 2	AK160788|Col1a2|12843|collagen, type I, alpha 2	AK160790|Col1a2|12843|collagen, type I, alpha 2	AK161605|Col1a2|12843|collagen, type I, alpha 2	AK164808|Col1a2|12843|collagen, type I, alpha 2	BC007158|Col1a2|12843|collagen, type I, alpha 2	BC042503|Col1a2|12843|collagen, type I, alpha 2	X58251|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr17_-_57367542_57367566	6.62804	NKX3-2.p2	NM_009778|C3|12266|complement component 3
mm9_v1_chr15_-_101834741_101834743	6.50321	NKX3-2.p2	AK146948|Krt8|16691|keratin 8	AK166768|Krt8|16691|keratin 8	AK167120|Krt8|16691|keratin 8	AK167471|Krt8|16691|keratin 8	AK168522|Krt8|16691|keratin 8	AK168540|Krt8|16691|keratin 8	AK168561|Krt8|16691|keratin 8	AK168726|Krt8|16691|keratin 8	AK168910|Krt8|16691|keratin 8	AK169691|Krt8|16691|keratin 8
mm9_v1_chr12_-_11443284_11443537	6.45887	NKX3-2.p2	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr15_-_101834746_101834798	6.41294	NKX3-2.p2	AK166993|Krt8|16691|keratin 8	AK145777|Krt8|16691|keratin 8	NM_031170|Krt8|16691|keratin 8
mm9_v1_chr5_+_67067497_67067526	6.33719	NKX3-2.p2	BC039177|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AB025313|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AF172334|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr2_-_165980462_165980784	6.19717	NKX3-2.p2	AK129316|Sulf2|72043|sulfatase 2
mm9_v1_chr7_-_148086285_148086315	6.17525	NKX3-2.p2	AK003116|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC027531|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	U15541|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC086930|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr15_-_101834744_101834745	6.15695	NKX3-2.p2	AK077597|Krt8|16691|keratin 8	AK145546|Krt8|16691|keratin 8	AK145679|Krt8|16691|keratin 8	AK166737|Krt8|16691|keratin 8	AK166854|Krt8|16691|keratin 8	AK166960|Krt8|16691|keratin 8	AK167269|Krt8|16691|keratin 8	AK169136|Krt8|16691|keratin 8
mm9_v1_chr4_+_41774206_41774242	6.14235	NKX3-2.p2	BC087957|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	NM_001193666|Gm13304|100504346|predicted gene 13304	NM_001193668|Gm10591|100504239|predicted gene 10591	NM_023052|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011335|Ccl21b|100042493|chemokine (C-C motif) ligand 21B (leucine)	U88322|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)
mm9_v1_chr5_+_67067359_67067456	6.12282	NKX3-2.p2	NM_011670|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr15_-_101834713_101834739	6.09487	NKX3-2.p2	M22831|Krt8|16691|keratin 8	BC106154|Krt8|16691|keratin 8	M21836|Krt8|16691|keratin 8	BC094009|Krt8|16691|keratin 8	AK147044|Krt8|16691|keratin 8
mm9_v1_chr7_+_3289029_3289038	6.08873	NKX3-2.p2	NM_001093764|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr6_-_92484838_92484854	6.05046	NKX3-2.p2	AK147576|Prickle2|243548|prickle homolog 2 (Drosophila)	AK147628|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134459|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr1_-_45560001_45560126	6.038	NKX3-2.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_-_66896961_66896978	6.01855	NKX3-2.p2	X64831|Tpm1|22003|tropomyosin 1, alpha	BC132035|Tpm1|22003|tropomyosin 1, alpha	BC132037|Tpm1|22003|tropomyosin 1, alpha	BC145307|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr15_+_78860043_78860112	5.99972	NKX3-2.p2	AK195119|H1f0|14958|H1 histone family, member 0
mm9_v1_chr17_-_24769569_24769573	5.97192	NKX3-2.p2	AK143799|Tsc2|22084|tuberous sclerosis 2	AK147908|Tsc2|22084|tuberous sclerosis 2	NM_001039363|Tsc2|22084|tuberous sclerosis 2	NM_011647|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr7_-_133819870_133819892	5.9377	NKX3-2.p2	BC005413|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	NM_133670|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	L02331|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	AK002700|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1
mm9_v1_chr17_-_24769511_24769537	5.92073	NKX3-2.p2	AK147302|Tsc2|22084|tuberous sclerosis 2	AK148072|Tsc2|22084|tuberous sclerosis 2	AK147874|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr10_+_96945057_96945132	5.85035	NKX3-2.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr7_+_137789668_137789799	5.84448	NKX3-2.p2	AK145721|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK050985|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK137273|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr17_-_24769539_24769566	5.83416	NKX3-2.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr6_-_87285690_87285768	5.82889	NKX3-2.p2	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr17_+_43526389_43526484	5.77111	NKX3-2.p2	NM_001081178|Gpr116|224792|G protein-coupled receptor 116
mm9_v1_chr12_-_112615555_112615701	5.77049	NKX3-2.p2	BC138035|Cdc42bpb|217866|CDC42 binding protein kinase beta	BC138037|Cdc42bpb|217866|CDC42 binding protein kinase beta	AY277589|Cdc42bpb|217866|CDC42 binding protein kinase beta
mm9_v1_chr4_-_42787449_42787524	5.76193	NKX3-2.p2	AF001980|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC025974|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC028747|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK155924|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011124|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK144258|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_001193667|Gm1987|100504362|predicted gene 1987
mm9_v1_chr4_+_42231042_42231117	5.7512	NKX3-2.p2	NM_001193667|Gm1987|100504362|predicted gene 1987	AK144258|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011124|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK155924|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC025974|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC028747|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AF001980|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)
mm9_v1_chr4_-_42393043_42393079	5.70784	NKX3-2.p2	NM_011335|Ccl21b|100042493|chemokine (C-C motif) ligand 21B (leucine)	U88322|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC087957|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	NM_001193666|Gm13304|100504346|predicted gene 13304	NM_001193668|Gm10591|100504239|predicted gene 10591	NM_023052|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)
mm9_v1_chr7_-_52317768_52317798	5.67745	NKX3-2.p2	AK005453|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr2_+_132607432_132607478	5.41338	NKX3-2.p2	AK077487|Chgb|12653|chromogranin B
mm9_v1_chr14_+_102237708_102237728	5.39582	NKX3-2.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr2_+_132607408_132607417	5.3787	NKX3-2.p2	BC014736|Chgb|12653|chromogranin B	X51429|Chgb|12653|chromogranin B
mm9_v1_chr8_+_114464651_114464671	5.28811	NKX3-2.p2	
mm9_v1_chr2_+_132607398_132607407	5.26054	NKX3-2.p2	AK133786|Chgb|12653|chromogranin B	AK019893|Chgb|12653|chromogranin B	AK044172|Chgb|12653|chromogranin B	AK077489|Chgb|12653|chromogranin B	AK133629|Chgb|12653|chromogranin B	AK133739|Chgb|12653|chromogranin B	X53028|Chgb|12653|chromogranin B
mm9_v1_chr6_-_21802087_21802170	5.25057	NKX3-2.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr12_-_73509925_73510040	5.24405	NKX3-2.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr15_+_3220999_3221005	5.19027	NKX3-2.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr15_+_3220766_3220979	5.14077	NKX3-2.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr19_-_29101759_29101824	5.13896	NKX3-2.p2	
mm9_v1_chr15_-_34608458_34608547	5.10095	NKX3-2.p2	AK033975|Nipal2|223473|NIPA-like domain containing 2	NM_145469|Nipal2|223473|NIPA-like domain containing 2	BC016107|Nipal2|223473|NIPA-like domain containing 2	AK132530|Nipal2|223473|NIPA-like domain containing 2	AK087325|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr1_-_45559700_45559773	5.02808	NKX3-2.p2	AK139130|Col5a2|12832|collagen, type V, alpha 2	AK160008|Col5a2|12832|collagen, type V, alpha 2	L02918|Col5a2|12832|collagen, type V, alpha 2	AK084803|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr5_-_44485951_44486006	4.99883	NKX3-2.p2	AF305215|Prom1|19126|prominin 1	AY099088|Prom1|19126|prominin 1	AY223521|Prom1|19126|prominin 1	AY223522|Prom1|19126|prominin 1	NM_001163578|Prom1|19126|prominin 1	NM_001163581|Prom1|19126|prominin 1	NM_001163582|Prom1|19126|prominin 1	NM_001163583|Prom1|19126|prominin 1	NM_001163584|Prom1|19126|prominin 1	NM_001163585|Prom1|19126|prominin 1
mm9_v1_chr12_+_118754951_118754998	4.99782	NKX3-2.p2	AK029995|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	NM_175930|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	AK030016|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr15_+_3220994_3220998	4.94497	NKX3-2.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr4_-_4065585_4065591	4.86704	NKX3-2.p2	M55181|Penk|18619|preproenkephalin	BC049766|Penk|18619|preproenkephalin	NM_001002927|Penk|18619|preproenkephalin
mm9_v1_chr15_+_78860623_78860757	4.82716	NKX3-2.p2	
mm9_v1_chr7_-_30954705_30954770	4.76621	NKX3-2.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr16_+_35002066_35002125	4.75251	NKX3-2.p2	BC062265|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr15_+_91958558_91958558	4.7315	NKX3-2.p2	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr11_+_3414983_3415036	4.6825	NKX3-2.p2	BC019742|Selm|114679|selenoprotein M
mm9_v1_chr19_-_44471675_44471892	4.65141	NKX3-2.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr6_+_71657791_71657963	4.62216	NKX3-2.p2	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr2_+_167514460_167514473	4.59878	NKX3-2.p2	AK143374|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr12_+_110779204_110779231	4.59794	NKX3-2.p2	AK145456|Meg3|17263|maternally expressed 3	AK155982|Meg3|17263|maternally expressed 3	AK157178|Meg3|17263|maternally expressed 3	Y13832|Meg3|17263|maternally expressed 3	BC094421|Meg3|17263|maternally expressed 3
mm9_v1_chr19_-_5844533_5844701	4.59071	NKX3-2.p2	AK191927|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	AK197973|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC095948|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC064019|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr9_-_66896992_66897014	4.55829	NKX3-2.p2	M22479|Tpm1|22003|tropomyosin 1, alpha	BC026720|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr6_-_124761078_124761358	4.5568	NKX3-2.p2	AK216486|Tpi1|21991|triosephosphate isomerase 1	AK201708|Tpi1|21991|triosephosphate isomerase 1	AK191907|Tpi1|21991|triosephosphate isomerase 1	AK191323|Tpi1|21991|triosephosphate isomerase 1	AK190112|Tpi1|21991|triosephosphate isomerase 1	AK204501|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr3_-_81878554_81878643	4.54428	NKX3-2.p2	AK147128|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AK139406|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AF020339|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AF297083|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	BC050945|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	BC056995|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	NM_001161796|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	NM_017469|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3
mm9_v1_chr10_-_76188683_76188791	4.53632	NKX3-2.p2	AK052924|Col6a1|12833|collagen, type VI, alpha 1	NM_009933|Col6a1|12833|collagen, type VI, alpha 1	X66405|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr8_+_56040553_56040581	4.52766	NKX3-2.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr1_-_170362388_170362504	4.51657	NKX3-2.p2	NM_008783|Pbx1|18514|pre B-cell leukemia transcription factor 1	NM_183355|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr1_-_163181313_163181346	4.45691	NKX3-2.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr5_+_67067477_67067482	4.44636	NKX3-2.p2	AK004066|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AK013729|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr11_-_70468061_70468117	4.44129	NKX3-2.p2	AK028117|Pfn1|18643|profilin 1	AK150780|Pfn1|18643|profilin 1	BC002080|Pfn1|18643|profilin 1
mm9_v1_chr6_+_17256415_17256449	4.42653	NKX3-2.p2	AY439333|Cav1|12389|caveolin 1, caveolae protein	BC052859|Cav1|12389|caveolin 1, caveolae protein	BC038280|Cav1|12389|caveolin 1, caveolae protein	U07645|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr8_+_126177709_126177845	4.38176	NKX3-2.p2	AB051827|Rhou|69581|ras homolog gene family, member U	BC134407|Rhou|69581|ras homolog gene family, member U	NM_133955|Rhou|69581|ras homolog gene family, member U	AF378088|Rhou|69581|ras homolog gene family, member U
mm9_v1_chr9_+_43877511_43877533	4.37398	NKX3-2.p2	NM_016808|Usp2|53376|ubiquitin specific peptidase 2	BC017517|Usp2|53376|ubiquitin specific peptidase 2	AY255640|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr11_+_3414884_3414917	4.35324	NKX3-2.p2	AK079358|Selm|114679|selenoprotein M	AY043488|Selm|114679|selenoprotein M	AK046034|Selm|114679|selenoprotein M	AK035312|Selm|114679|selenoprotein M	AK086243|Selm|114679|selenoprotein M
mm9_v1_chr10_-_127935725_127935761	4.34954	NKX3-2.p2	BC037527|Myl6b|216459|myosin, light polypeptide 6B	NM_172259|Myl6b|216459|myosin, light polypeptide 6B
mm9_v1_chr2_+_167514414_167514452	4.33136	NKX3-2.p2	NM_009883|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta	X62600|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr19_-_38199291_38199302	4.32319	NKX3-2.p2	AK004839|Rbp4|19662|retinol binding protein 4, plasma	AK008765|Rbp4|19662|retinol binding protein 4, plasma	NM_011255|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr9_+_106350967_106351018	4.28027	NKX3-2.p2	NM_029631|Abhd14b|76491|abhydrolase domain containing 14b	BC019410|Abhd14b|76491|abhydrolase domain containing 14b	AK007469|Abhd14b|76491|abhydrolase domain containing 14b
mm9_v1_chr9_+_75192367_75192390	4.2635	NKX3-2.p2	AK211560|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK215403|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK216405|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK206251|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr6_+_17256383_17256404	4.26129	NKX3-2.p2	AK003489|Cav1|12389|caveolin 1, caveolae protein	AK035592|Cav1|12389|caveolin 1, caveolae protein	AK028738|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr4_-_60083171_60083243	4.25617	NKX3-2.p2	EU882230|Mup7|100041658|major urinary protein 7	BC092254|Mup1|17840|major urinary protein 1	BC091744|Mup1|17840|major urinary protein 1	BC100586|Mup1|17840|major urinary protein 1
mm9_v1_chr15_+_101933364_101933418	4.24416	NKX3-2.p2	AK147789|Tenc1|209039|tensin like C1 domain-containing phosphatase	AK147941|Tenc1|209039|tensin like C1 domain-containing phosphatase	BC042190|Tenc1|209039|tensin like C1 domain-containing phosphatase	NM_153533|Tenc1|209039|tensin like C1 domain-containing phosphatase
mm9_v1_chr2_+_164312023_164312078	4.23393	NKX3-2.p2	BC019947|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	AY187289|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr19_-_5845001_5845012	4.22414	NKX3-2.p2	BC025215|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr2_+_84903869_84903875	4.20461	NKX3-2.p2	BC024499|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr16_+_56477956_56478012	4.19266	NKX3-2.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr2_+_164388211_164388224	4.17027	NKX3-2.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chr11_-_70468019_70468032	4.15427	NKX3-2.p2	X14425|Pfn1|18643|profilin 1
mm9_v1_chr6_-_137468412_137468417	4.11286	NKX3-2.p2	AK165684|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr2_+_132607013_132607168	4.07356	NKX3-2.p2	AK158857|Chgb|12653|chromogranin B	NM_007694|Chgb|12653|chromogranin B
mm9_v1_chr11_-_74424353_74424416	4.07223	NKX3-2.p2	AK147290|Rap1gap2|380711|RAP1 GTPase activating protein 2
mm9_v1_chr12_-_73509668_73509745	4.03758	NKX3-2.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr13_+_46597448_46597458	4.0334	NKX3-2.p2	BC057937|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr13_+_46597271_46597443	4.03277	NKX3-2.p2	AK035556|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	NM_026056|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr1_-_93355893_93355916	4.02739	NKX3-2.p2	AK159847|Per2|18627|period homolog 2 (Drosophila)	AK165556|Per2|18627|period homolog 2 (Drosophila)	NM_011066|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr7_-_108986589_108986739	4.01325	NKX3-2.p2	AF162781|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_010567|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr16_-_45844409_45844495	4.01036	NKX3-2.p2	AK165251|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	AF506821|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	NM_153412|Phldb2|208177|pleckstrin homology-like domain, family B, member 2
mm9_v1_chr18_+_37915375_37915594	3.98842	NKX3-2.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr2_+_35137898_35137961	3.98727	NKX3-2.p2	AK143664|Gsn|227753|gelsolin	AK168829|Gsn|227753|gelsolin	AK076156|Gsn|227753|gelsolin	NM_146120|Gsn|227753|gelsolin	BC023143|Gsn|227753|gelsolin
mm9_v1_chr7_-_108986297_108986435	3.97989	NKX3-2.p2	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr2_+_74543545_74543545	3.96023	NKX3-2.p2	NM_008276|Hoxd8|15437|homeobox D8
mm9_v1_chr8_+_56040445_56040534	3.95789	NKX3-2.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr6_+_17256369_17256377	3.95683	NKX3-2.p2	AB029929|Cav1|12389|caveolin 1, caveolae protein	NM_007616|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr15_-_93426312_93426402	3.91294	NKX3-2.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr11_-_70468130_70468151	3.91286	NKX3-2.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr11_+_3414792_3414875	3.90011	NKX3-2.p2	BC147333|Selm|114679|selenoprotein M	BC147332|Selm|114679|selenoprotein M	AK018791|Selm|114679|selenoprotein M
mm9_v1_chr9_-_21571635_21571709	3.89688	NKX3-2.p2	AK189211|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr19_-_38199036_38199055	3.88954	NKX3-2.p2	AK169338|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr7_-_74904546_74904632	3.86305	NKX3-2.p2	BC115442|Synm|233335|synemin, intermediate filament protein	BC115443|Synm|233335|synemin, intermediate filament protein	BC026872|Synm|233335|synemin, intermediate filament protein	BC040093|Synm|233335|synemin, intermediate filament protein	AJ579700|Synm|233335|synemin, intermediate filament protein	AJ579701|Synm|233335|synemin, intermediate filament protein	AJ579702|Synm|233335|synemin, intermediate filament protein	AK143019|Synm|233335|synemin, intermediate filament protein	NM_183312|Synm|233335|synemin, intermediate filament protein	NM_201639|Synm|233335|synemin, intermediate filament protein	NM_207663|Synm|233335|synemin, intermediate filament protein
mm9_v1_chrM_+_12383_12506	3.83141	NKX3-2.p2	
mm9_v1_chr9_-_95745663_95745697	3.82071	NKX3-2.p2	AK133070|Pls1|102502|plastin 1 (I-isoform)	NM_001033210|Pls1|102502|plastin 1 (I-isoform)
mm9_v1_chr18_-_33623287_33623340	3.81781	NKX3-2.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr6_+_7505070_7505199	3.80668	NKX3-2.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chrX_+_70728939_70728991	3.79762	NKX3-2.p2	BC057185|Bgn|12111|biglycan	AK135496|Bgn|12111|biglycan	AK155973|Bgn|12111|biglycan	AK164867|Bgn|12111|biglycan	L20276|Bgn|12111|biglycan	NM_007542|Bgn|12111|biglycan	AK171870|Bgn|12111|biglycan	AK086920|Bgn|12111|biglycan	BC019502|Bgn|12111|biglycan	BC005452|Bgn|12111|biglycan
mm9_v1_chr10_-_70622370_70622639	3.77597	NKX3-2.p2	AF319464|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	BC111523|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	NM_031397|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	AK076154|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr7_+_120909625_120909653	3.77424	NKX3-2.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr15_-_34608600_34608626	3.7641	NKX3-2.p2	AK038556|Nipal2|223473|NIPA-like domain containing 2	BC058207|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr6_+_117118552_117118673	3.7525	NKX3-2.p2	NM_001012477|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_013655|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_021704|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK157553|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK045092|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK075596|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43804|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43805|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12029|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12030|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC046827|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC006640|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC020297|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC029335|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D21072|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	S74318|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	CT010389|Cxcl12|20315|chemokine (C-X-C motif) ligand 12
mm9_v1_chr4_+_104830022_104830255	3.739	NKX3-2.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr9_-_66897015_66897084	3.70092	NKX3-2.p2	AK168640|Tpm1|22003|tropomyosin 1, alpha	AK168783|Tpm1|22003|tropomyosin 1, alpha	AK002271|Tpm1|22003|tropomyosin 1, alpha	AK003175|Tpm1|22003|tropomyosin 1, alpha	AK077713|Tpm1|22003|tropomyosin 1, alpha	AK169188|Tpm1|22003|tropomyosin 1, alpha	NM_001164248|Tpm1|22003|tropomyosin 1, alpha	NM_001164249|Tpm1|22003|tropomyosin 1, alpha	NM_001164250|Tpm1|22003|tropomyosin 1, alpha	NM_001164251|Tpm1|22003|tropomyosin 1, alpha	NM_001164255|Tpm1|22003|tropomyosin 1, alpha	NM_024427|Tpm1|22003|tropomyosin 1, alpha	AK032942|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr7_-_148086341_148086344	3.69996	NKX3-2.p2	NM_007751|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr2_+_167514489_167514504	3.69548	NKX3-2.p2	M61007|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr5_-_24107718_24107834	3.67971	NKX3-2.p2	BC060525|Smarcd3|66993|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	AK005094|Smarcd3|66993|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	AK158019|Smarcd3|66993|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	NM_025891|Smarcd3|66993|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	AK019064|Smarcd3|66993|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
mm9_v1_chr9_-_49311823_49311910	3.67428	NKX3-2.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr12_-_87419813_87420026	3.66621	NKX3-2.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr7_+_112788972_112789010	3.66475	NKX3-2.p2	AF150103|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr1_-_176851918_176851937	3.65868	NKX3-2.p2	AK161827|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	BC079905|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr4_+_104829867_104829919	3.65267	NKX3-2.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr3_+_52845429_52845504	3.6212	NKX3-2.p2	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr9_-_110649625_110649648	3.61655	NKX3-2.p2	BC013446|Pth1r|19228|parathyroid hormone 1 receptor	NM_011199|Pth1r|19228|parathyroid hormone 1 receptor
mm9_v1_chr19_+_3205598_3205608	3.61459	NKX3-2.p2	
mm9_v1_chr15_+_6336747_6336872	3.60024	NKX3-2.p2	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr2_+_10075220_10075229	3.57208	NKX3-2.p2	BC043314|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr10_+_21712008_21712034	3.56239	NKX3-2.p2	NM_001161849|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr8_+_46970814_46970842	3.56178	NKX3-2.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr4_-_63681749_63681759	3.56108	NKX3-2.p2	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr7_-_133943848_133943969	3.55513	NKX3-2.p2	AK154295|Aldoa|11674|aldolase A, fructose-bisphosphate	NM_001177308|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr7_-_104566013_104566047	3.54889	NKX3-2.p2	BC009165|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	NM_009381|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	AK050300|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)
mm9_v1_chr7_+_112788953_112788961	3.5317	NKX3-2.p2	AK010994|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr9_+_46036788_46036792	3.5184	NKX3-2.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr10_+_87321789_87322010	3.49783	NKX3-2.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr7_+_52105323_52105411	3.49566	NKX3-2.p2	BC002180|Akt1s1|67605|AKT1 substrate 1 (proline-rich)
mm9_v1_chr9_-_105372402_105372478	3.49292	NKX3-2.p2	AK209035|Atp2c1|235574|ATPase, Ca++-sequestering	AK173154|Atp2c1|235574|ATPase, Ca++-sequestering	AJ551270|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr3_-_143867852_143867939	3.45454	NKX3-2.p2	AK080534|Lmo4|16911|LIM domain only 4	BC010278|Lmo4|16911|LIM domain only 4	AF096996|Lmo4|16911|LIM domain only 4
mm9_v1_chr12_-_73509537_73509656	3.45399	NKX3-2.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr8_+_97296066_97296079	3.45106	NKX3-2.p2	NM_009142|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr11_+_32183671_32183700	3.44967	NKX3-2.p2	AK002222|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010937|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011025|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011055|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_008218|Hba-a1|15122|hemoglobin alpha, adult chain 1	L75940|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK003077|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK005434|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010422|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010923|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010927|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010933|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010938|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010987|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011018|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011023|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011028|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011030|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011073|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011076|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011121|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012329|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK012348|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012755|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK019138|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK028173|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK076068|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK171893|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_001083955|Hba-a2|110257|hemoglobin alpha, adult chain 2	M10466|Hba-a2|110257|hemoglobin alpha, adult chain 2	BC043020|Hba-a1|15122|hemoglobin alpha, adult chain 1	M26895|Hba-a2|110257|hemoglobin alpha, adult chain 2
mm9_v1_chr6_+_4483741_4483796	3.42337	NKX3-2.p2	BC012438|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr7_-_135073577_135073594	3.40604	NKX3-2.p2	AK078696|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr7_-_135073508_135073550	3.404	NKX3-2.p2	AK010640|Prss8|76560|protease, serine, 8 (prostasin)	AF188613|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr7_+_27904981_27904993	3.39138	NKX3-2.p2	M77497|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr1_+_72757813_72757889	3.38576	NKX3-2.p2	NM_009084|Rpl37a|19981|ribosomal protein L37a	AK012396|Rpl37a|19981|ribosomal protein L37a	AK003501|Rpl37a|19981|ribosomal protein L37a	AK011634|Rpl37a|19981|ribosomal protein L37a	AK012439|Rpl37a|19981|ribosomal protein L37a	AK012655|Rpl37a|19981|ribosomal protein L37a	AK013246|Rpl37a|19981|ribosomal protein L37a	AK014283|Rpl37a|19981|ribosomal protein L37a	AK147108|Rpl37a|19981|ribosomal protein L37a	AK152159|Rpl37a|19981|ribosomal protein L37a	AK168182|Rpl37a|19981|ribosomal protein L37a	AK168599|Rpl37a|19981|ribosomal protein L37a	AK166582|Rpl37a|19981|ribosomal protein L37a	X73331|Rpl37a|19981|ribosomal protein L37a	BC086796|Rpl37a|19981|ribosomal protein L37a	BC096413|Rpl37a|19981|ribosomal protein L37a
mm9_v1_chr12_+_30622876_30622919	3.35855	NKX3-2.p2	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr2_+_136539202_136539314	3.35804	NKX3-2.p2	AK138653|Snap25|20614|synaptosomal-associated protein 25	AK161896|Snap25|20614|synaptosomal-associated protein 25	M22012|Snap25|20614|synaptosomal-associated protein 25	BC018249|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr7_-_135073600_135073612	3.3578	NKX3-2.p2	BC003851|Prss8|76560|protease, serine, 8 (prostasin)	AB038244|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr6_+_30589440_30589446	3.35478	NKX3-2.p2	AK003088|Cpa1|109697|carboxypeptidase A1
mm9_v1_chr19_-_38199267_38199278	3.34713	NKX3-2.p2	BC031809|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr10_-_126648509_126648683	3.34657	NKX3-2.p2	BC021383|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AB054591|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK148299|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK140079|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	NM_054097|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm9_v1_chr7_-_28338127_28338176	3.34585	NKX3-2.p2	BC068170|Pld3|18807|phospholipase D family, member 3	AF026124|Pld3|18807|phospholipase D family, member 3	NM_011116|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr10_+_58684631_58684700	3.33587	NKX3-2.p2	AK030944|Ankrd57|268301|ankyrin repeat domain 57	NM_172939|Ankrd57|268301|ankyrin repeat domain 57	AK050497|Ankrd57|268301|ankyrin repeat domain 57
mm9_v1_chr3_-_87067445_87067682	3.33466	NKX3-2.p2	AK034125|Fcrls|80891|Fc receptor-like S, scavenger receptor	NM_030707|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF329486|Fcrls|80891|Fc receptor-like S, scavenger receptor	AB028174|Fcrls|80891|Fc receptor-like S, scavenger receptor	AK076123|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506556|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506557|Fcrls|80891|Fc receptor-like S, scavenger receptor	BC016551|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF302046|Fcrls|80891|Fc receptor-like S, scavenger receptor
mm9_v1_chr3_-_143868114_143868170	3.31041	NKX3-2.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr7_-_135073617_135073632	3.31018	NKX3-2.p2	AF378085|Prss8|76560|protease, serine, 8 (prostasin)	AY335911|Prss8|76560|protease, serine, 8 (prostasin)	NM_133351|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr8_+_122516412_122516427	3.3047	NKX3-2.p2	AK149909|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK149925|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK150180|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK132171|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2
mm9_v1_chr9_+_122076647_122076688	3.27914	NKX3-2.p2	
mm9_v1_chr3_-_98662116_98662184	3.2675	NKX3-2.p2	BC052659|Hsd3b1|15492|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	M58567|Hsd3b1|15492|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
mm9_v1_chr8_+_114464639_114464646	3.26225	NKX3-2.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr5_+_136514365_136514365	3.24347	NKX3-2.p2	AK052525|Upk3b|100647|uroplakin 3B	NM_175309|Upk3b|100647|uroplakin 3B
mm9_v1_chr1_-_135817945_135817982	3.21586	NKX3-2.p2	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr1_+_173367685_173367771	3.21314	NKX3-2.p2	AK033574|F11r|16456|F11 receptor	NM_172647|F11r|16456|F11 receptor	BC021876|F11r|16456|F11 receptor	CT010347|F11r|16456|F11 receptor
mm9_v1_chr7_+_135390325_135390446	3.20173	NKX3-2.p2	DQ143891|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC056362|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	NM_009365|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr2_+_169459145_169459258	3.1895	NKX3-2.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr8_-_13494457_13494536	3.18722	NKX3-2.p2	BC005444|Gas6|14456|growth arrest specific 6	X59846|Gas6|14456|growth arrest specific 6	AK086187|Gas6|14456|growth arrest specific 6	NM_019521|Gas6|14456|growth arrest specific 6
mm9_v1_chr17_+_34400152_34400289	3.17485	NKX3-2.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr18_-_33623400_33623430	3.16822	NKX3-2.p2	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr17_-_56249206_56249228	3.16053	NKX3-2.p2	NM_020568|Plin4|57435|perilipin 4	AF064748|Plin4|57435|perilipin 4
mm9_v1_chr10_+_87322774_87322795	3.15762	NKX3-2.p2	AK038119|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr5_+_136514548_136514570	3.15438	NKX3-2.p2	AK157647|Upk3b|100647|uroplakin 3B	AY233463|Upk3b|100647|uroplakin 3B	BC061224|Upk3b|100647|uroplakin 3B	AK042067|Upk3b|100647|uroplakin 3B
mm9_v1_chrX_-_137077133_137077229	3.15207	NKX3-2.p2	AF201287|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr11_-_70846926_70847014	3.14682	NKX3-2.p2	AJ271140|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	BC069976|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK083923|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK018106|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr12_+_52791952_52792023	3.1464	NKX3-2.p2	BC001985|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1	NM_021710|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1	AF092093|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1
mm9_v1_chr5_-_139606339_139606437	3.1403	NKX3-2.p2	AK158994|Prkar1b|19085|protein kinase, cAMP dependent regulatory, type I beta
mm9_v1_chr2_+_91050920_91051054	3.12589	NKX3-2.p2	AK080581|Acp2|11432|acid phosphatase 2, lysosomal
mm9_v1_chr7_-_28338185_28338214	3.10602	NKX3-2.p2	BC076586|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr17_-_87846158_87846274	3.08639	NKX3-2.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr4_-_43536296_43536373	3.07903	NKX3-2.p2	X58381|Tpm2|22004|tropomyosin 2, beta	BC014809|Tpm2|22004|tropomyosin 2, beta	M87635|Tpm2|22004|tropomyosin 2, beta	X12650|Tpm2|22004|tropomyosin 2, beta	BC024358|Tpm2|22004|tropomyosin 2, beta	AK003186|Tpm2|22004|tropomyosin 2, beta	AK132162|Tpm2|22004|tropomyosin 2, beta
mm9_v1_chr7_+_135390456_135390509	3.07144	NKX3-2.p2	AK158409|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK085042|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK003170|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK087114|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK156423|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC002049|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK041233|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143892|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143893|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143894|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr2_+_136539143_136539198	3.04453	NKX3-2.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr8_+_122516369_122516408	3.03093	NKX3-2.p2	AK154308|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	NM_030209|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	BC090642|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK033858|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2
mm9_v1_chr12_+_82046496_82046547	3.02994	NKX3-2.p2	AK002267|Srsf5|20384|serine/arginine-rich splicing factor 5	AK005552|Srsf5|20384|serine/arginine-rich splicing factor 5	AK007729|Srsf5|20384|serine/arginine-rich splicing factor 5	AK142009|Srsf5|20384|serine/arginine-rich splicing factor 5	AK146624|Srsf5|20384|serine/arginine-rich splicing factor 5	AK078065|Srsf5|20384|serine/arginine-rich splicing factor 5	BC082593|Srsf5|20384|serine/arginine-rich splicing factor 5	BC085267|Srsf5|20384|serine/arginine-rich splicing factor 5	BC038624|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr7_-_118089700_118089700	3.02087	NKX3-2.p2	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr4_+_40867085_40867088	2.99911	NKX3-2.p2	BC117048|Spink4|20731|serine peptidase inhibitor, Kazal type 4	BC117050|Spink4|20731|serine peptidase inhibitor, Kazal type 4	NM_011463|Spink4|20731|serine peptidase inhibitor, Kazal type 4
mm9_v1_chr4_-_141154138_141154141	2.99119	NKX3-2.p2	AK010660|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr5_-_5380077_5380250	2.99078	NKX3-2.p2	AK129226|Cdk14|18647|cyclin-dependent kinase 14	AK016370|Cdk14|18647|cyclin-dependent kinase 14	AK051411|Cdk14|18647|cyclin-dependent kinase 14	AK083790|Cdk14|18647|cyclin-dependent kinase 14	AF033655|Cdk14|18647|cyclin-dependent kinase 14	AK051283|Cdk14|18647|cyclin-dependent kinase 14	AK045083|Cdk14|18647|cyclin-dependent kinase 14	NM_011074|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr17_-_31281223_31281229	2.9884	NKX3-2.p2	AK003093|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	NM_009363|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr4_-_129851941_129852025	2.988	NKX3-2.p2	BC005738|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AB050626|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr2_-_103143352_103143356	2.98788	NKX3-2.p2	NM_007914|Ehf|13661|ets homologous factor
mm9_v1_chr16_-_45844343_45844346	2.98674	NKX3-2.p2	AK049595|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	BC050915|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	BC060683|Phldb2|208177|pleckstrin homology-like domain, family B, member 2
mm9_v1_chr12_-_80273320_80273473	2.9785	NKX3-2.p2	AF035821|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AF035208|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC009810|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC080204|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC002290|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK160624|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK002289|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	NM_016800|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog
mm9_v1_chr11_+_56825307_56825536	2.9688	NKX3-2.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr11_+_3414686_3414704	2.96751	NKX3-2.p2	AK079576|Selm|114679|selenoprotein M	NM_053267|Selm|114679|selenoprotein M
mm9_v1_chr1_-_192994532_192994569	2.96156	NKX3-2.p2	AK217100|Atf3|11910|activating transcription factor 3
mm9_v1_chr14_+_102239673_102239864	2.95878	NKX3-2.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr16_+_23146608_23146621	2.95184	NKX3-2.p2	AK134112|Adipoq|11450|adiponectin, C1Q and collagen domain containing	NM_009605|Adipoq|11450|adiponectin, C1Q and collagen domain containing
mm9_v1_chrX_-_22942176_22942193	2.94236	NKX3-2.p2	AK004677|Klhl13|67455|kelch-like 13 (Drosophila)	NM_026167|Klhl13|67455|kelch-like 13 (Drosophila)	AK045102|Klhl13|67455|kelch-like 13 (Drosophila)	AK051752|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chrX_-_7524828_7525014	2.93509	NKX3-2.p2	AK148144|Hdac6|15185|histone deacetylase 6	BC041105|Hdac6|15185|histone deacetylase 6	AK148092|Hdac6|15185|histone deacetylase 6	AK154099|Hdac6|15185|histone deacetylase 6	AK155546|Hdac6|15185|histone deacetylase 6	AK155545|Hdac6|15185|histone deacetylase 6	NM_001130416|Hdac6|15185|histone deacetylase 6	NM_010413|Hdac6|15185|histone deacetylase 6
mm9_v1_chr9_-_58160769_58160855	2.92852	NKX3-2.p2	AF357006|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr5_+_17080553_17080681	2.92653	NKX3-2.p2	AK034239|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK078589|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC066852|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	NM_013657|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	X85994|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm9_v1_chr9_+_46036703_46036712	2.92239	NKX3-2.p2	NM_009692|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr8_+_3655765_3655792	2.89046	NKX3-2.p2	AK131613|Retn|57264|resistin	AF323080|Retn|57264|resistin	AK131869|Retn|57264|resistin	AF290870|Retn|57264|resistin	NM_022984|Retn|57264|resistin	BC051196|Retn|57264|resistin
mm9_v1_chr8_+_106625524_106625609	2.87157	NKX3-2.p2	NM_009868|Cdh5|12562|cadherin 5	AK164474|Cdh5|12562|cadherin 5	D63942|Cdh5|12562|cadherin 5	AK167620|Cdh5|12562|cadherin 5	BC054790|Cdh5|12562|cadherin 5	X83930|Cdh5|12562|cadherin 5
mm9_v1_chr14_-_79701303_79701446	2.85601	NKX3-2.p2	CT010403|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	BC050935|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	BC049580|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	AF276981|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	AK004705|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	AK004451|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene	NM_025427|1190002H23Rik|66214|RIKEN cDNA 1190002H23 gene
mm9_v1_chr1_-_93355838_93355884	2.85468	NKX3-2.p2	AK044658|Per2|18627|period homolog 2 (Drosophila)	AF035830|Per2|18627|period homolog 2 (Drosophila)	AK122253|Per2|18627|period homolog 2 (Drosophila)	AF036893|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chrX_+_160577312_160577325	2.84932	NKX3-2.p2	EF408739|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	EF408740|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr1_+_62750471_62750778	2.84029	NKX3-2.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr9_+_62705890_62705945	2.82871	NKX3-2.p2	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr19_+_8994860_8994941	2.82862	NKX3-2.p2	AK144402|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC004038|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	NM_024256|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK048428|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC012930|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK140424|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr2_+_174153230_174153414	2.81933	NKX3-2.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr11_+_56825258_56825293	2.81037	NKX3-2.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr4_+_144482722_144482729	2.80997	NKX3-2.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr6_-_53770687_53770818	2.80982	NKX3-2.p2	BC043099|Tril|66873|TLR4 interactor with leucine-rich repeats	BC059224|Tril|66873|TLR4 interactor with leucine-rich repeats	NM_025817|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr11_+_5855721_5855888	2.80362	NKX3-2.p2	NM_019661|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK002916|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK007486|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK147098|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK150472|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK159253|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	BC006760|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AF076956|Ykt6|56418|YKT6 homolog (S. Cerevisiae)
mm9_v1_chr2_+_121239744_121239768	2.80216	NKX3-2.p2	BC033439|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr2_+_174170886_174171016	2.80145	NKX3-2.p2	AK178212|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182236|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182338|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK183674|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK186374|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr6_-_101327849_101327941	2.79392	NKX3-2.p2	AK173098|Pdzrn3|55983|PDZ domain containing RING finger 3	HM560981|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127084|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127085|Pdzrn3|55983|PDZ domain containing RING finger 3	NM_018884|Pdzrn3|55983|PDZ domain containing RING finger 3
mm9_v1_chr17_+_26792701_26792940	2.75849	NKX3-2.p2	AK177289|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK191970|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK204835|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr17_-_7997838_7997838	2.75655	NKX3-2.p2	NM_001081416|Fndc1|68655|fibronectin type III domain containing 1
mm9_v1_chr11_-_55233581_55233646	2.75179	NKX3-2.p2	NM_009242|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr9_+_57770320_57770335	2.74026	NKX3-2.p2	AK207788|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm9_v1_chrX_-_137908618_137908628	2.7399	NKX3-2.p2	AB041351|Col4a6|94216|collagen, type IV, alpha 6	NM_053185|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr4_+_57907032_57907040	2.73404	NKX3-2.p2	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr7_+_135667279_135667363	2.72564	NKX3-2.p2	AK007414|Bag3|29810|BCL2-associated athanogene 3	AK036675|Bag3|29810|BCL2-associated athanogene 3	AK016510|Bag3|29810|BCL2-associated athanogene 3	AF130471|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr8_+_126755253_126755502	2.71507	NKX3-2.p2	NM_139272|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK046567|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	BC059818|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK149609|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK145122|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AF348968|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK151536|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm9_v1_chr2_-_68310324_68310350	2.71255	NKX3-2.p2	BC051964|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr12_+_82046447_82046492	2.71106	NKX3-2.p2	NM_001079694|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_001079695|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_009159|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr6_-_125444722_125444810	2.70896	NKX3-2.p2	AK151619|Cd9|12527|CD9 antigen	AK170310|Cd9|12527|CD9 antigen	AK151443|Cd9|12527|CD9 antigen	BC070474|Cd9|12527|CD9 antigen	NM_007657|Cd9|12527|CD9 antigen	AK002251|Cd9|12527|CD9 antigen	AK012793|Cd9|12527|CD9 antigen
mm9_v1_chr7_-_29965419_29965499	2.70694	NKX3-2.p2	BC005717|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK027973|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150982|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK167948|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159216|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK168886|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr8_+_122190264_122190448	2.70012	NKX3-2.p2	AK009971|Wfdc1|67866|WAP four-disulfide core domain 1	AK132541|Wfdc1|67866|WAP four-disulfide core domain 1	NM_023395|Wfdc1|67866|WAP four-disulfide core domain 1	BC132073|Wfdc1|67866|WAP four-disulfide core domain 1	BC132469|Wfdc1|67866|WAP four-disulfide core domain 1	BC145305|Wfdc1|67866|WAP four-disulfide core domain 1	AK142707|Wfdc1|67866|WAP four-disulfide core domain 1	AK161606|Wfdc1|67866|WAP four-disulfide core domain 1	AK018575|Wfdc1|67866|WAP four-disulfide core domain 1	BC038122|Wfdc1|67866|WAP four-disulfide core domain 1	BC025850|Wfdc1|67866|WAP four-disulfide core domain 1
mm9_v1_chr9_+_46036799_46036808	2.6942	NKX3-2.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr1_-_73975053_73975112	2.69195	NKX3-2.p2	AK004758|Tns1|21961|tensin 1
mm9_v1_chr4_+_137798218_137798221	2.68997	NKX3-2.p2	AK218342|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr7_-_96666035_96666071	2.67052	NKX3-2.p2	AK009847|Prss23|76453|protease, serine, 23	AK156348|Prss23|76453|protease, serine, 23	AK034439|Prss23|76453|protease, serine, 23	AK078518|Prss23|76453|protease, serine, 23	AK033671|Prss23|76453|protease, serine, 23
mm9_v1_chr7_-_31839825_31839873	2.66756	NKX3-2.p2	BC024671|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_052991|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_194321|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr4_-_135609269_135609274	2.65915	NKX3-2.p2	BC025077|Rpl11|67025|ribosomal protein L11
mm9_v1_chr17_-_34424623_34424771	2.64879	NKX3-2.p2	AF065910|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF065911|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11356|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11357|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11358|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01924|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01922|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF119253|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF119254|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	X52643|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AY452201|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC019721|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	NM_010378|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK154000|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC031711|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01923|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M21931|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	V00832|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC029620|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC043925|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK171383|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK002532|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK170931|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK170844|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha
mm9_v1_chr13_-_115248787_115248889	2.64016	NKX3-2.p2	X83377|Fst|14313|follistatin	Z29532|Fst|14313|follistatin
mm9_v1_chr4_+_63005581_63005631	2.6389	NKX3-2.p2	AK138985|Orm1|18405|orosomucoid 1	M27008|Orm1|18405|orosomucoid 1	NM_008768|Orm1|18405|orosomucoid 1	BC012725|Orm1|18405|orosomucoid 1	CT010399|Orm1|18405|orosomucoid 1
mm9_v1_chr19_+_27291507_27291624	2.62087	NKX3-2.p2	AK044683|Vldlr|22359|very low density lipoprotein receptor	AK076172|Vldlr|22359|very low density lipoprotein receptor	NM_001161420|Vldlr|22359|very low density lipoprotein receptor	NM_013703|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr9_-_21571810_21571832	2.61662	NKX3-2.p2	BC028803|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr13_-_115248924_115248982	2.61515	NKX3-2.p2	AK083556|Fst|14313|follistatin	NM_008046|Fst|14313|follistatin	BC144926|Fst|14313|follistatin	BC145945|Fst|14313|follistatin
mm9_v1_chr8_+_107850249_107850346	2.60883	NKX3-2.p2	NM_025486|Tmem208|66320|transmembrane protein 208	AK002499|Tmem208|66320|transmembrane protein 208	AK005662|Tmem208|66320|transmembrane protein 208	AK131833|Tmem208|66320|transmembrane protein 208	BC005665|Tmem208|66320|transmembrane protein 208	BC024608|Tmem208|66320|transmembrane protein 208	AK011635|Tmem208|66320|transmembrane protein 208
mm9_v1_chr3_+_95087357_95087526	2.60856	NKX3-2.p2	AK179473|Fam63a|75007|family with sequence similarity 63, member A	AK213538|Fam63a|75007|family with sequence similarity 63, member A	AK213681|Fam63a|75007|family with sequence similarity 63, member A	AK215508|Fam63a|75007|family with sequence similarity 63, member A	AK218735|Fam63a|75007|family with sequence similarity 63, member A	AK195238|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr10_+_69388242_69388279	2.60584	NKX3-2.p2	L40631|Ank3|11735|ankyrin 3, epithelial	NM_009670|Ank3|11735|ankyrin 3, epithelial	NM_170687|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr9_+_45178521_45178551	2.60446	NKX3-2.p2	BC042579|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK042808|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK018354|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AB032010|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr17_-_31281184_31281204	2.59516	NKX3-2.p2	BC050086|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	X51697|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	BC087889|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr13_-_55422986_55423014	2.57114	NKX3-2.p2	AB232619|Rab24|19336|RAB24, member RAS oncogene family	M79306|Rab24|19336|RAB24, member RAS oncogene family	Z22819|Rab24|19336|RAB24, member RAS oncogene family
mm9_v1_chr1_-_72905107_72905143	2.55785	NKX3-2.p2	AK011683|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr16_-_52453104_52453136	2.54013	NKX3-2.p2	AK053201|Alcam|11658|activated leukocyte cell adhesion molecule	AK030851|Alcam|11658|activated leukocyte cell adhesion molecule	NM_009655|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr18_+_23573939_23573956	2.53142	NKX3-2.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr7_-_29965500_29965550	2.53113	NKX3-2.p2	BC004075|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159795|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159926|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK166718|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK002921|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK003436|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK153329|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150493|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK051257|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK020132|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr3_+_92019756_92019865	2.52951	NKX3-2.p2	NM_001164787|Sprr2a2|100303744|small proline-rich protein 2A2	NM_011468|Sprr2a1|20755|small proline-rich protein 2A1	AK003391|Sprr2a1|20755|small proline-rich protein 2A1	AK007633|Sprr2a1|20755|small proline-rich protein 2A1	AK008887|Sprr2a1|20755|small proline-rich protein 2A1	AK147183|Sprr2a1|20755|small proline-rich protein 2A1	AK009238|Sprr2a1|20755|small proline-rich protein 2A1	AK168529|Sprr2a1|20755|small proline-rich protein 2A1	AY158986|Sprr2a1|20755|small proline-rich protein 2A1	AK008631|Sprr2a1|20755|small proline-rich protein 2A1	AK009790|Sprr2a1|20755|small proline-rich protein 2A1	BC010818|Sprr2a2|100303744|small proline-rich protein 2A2	AK007928|Sprr2a2|100303744|small proline-rich protein 2A2
mm9_v1_chr2_+_68973856_68973946	2.52688	NKX3-2.p2	NM_181547|Nostrin|329416|nitric oxide synthase trafficker	AK052926|Nostrin|329416|nitric oxide synthase trafficker	BC069942|Nostrin|329416|nitric oxide synthase trafficker	AY280963|Nostrin|329416|nitric oxide synthase trafficker	AJ564264|Nostrin|329416|nitric oxide synthase trafficker
mm9_v1_chr1_-_170361985_170362027	2.51638	NKX3-2.p2	AF020196|Pbx1|18514|pre B-cell leukemia transcription factor 1	BC058390|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr8_-_86097128_86097151	2.51456	NKX3-2.p2	AK172506|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK171718|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr11_+_28767772_28767889	2.51055	NKX3-2.p2	BC031184|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr12_+_81745188_81745226	2.50758	NKX3-2.p2	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr19_-_44470218_44470225	2.49824	NKX3-2.p2	AK163960|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr6_+_21166108_21166108	2.49231	NKX3-2.p2	BC079667|Kcnd2|16508|potassium voltage-gated channel, Shal-related family, member 2	NM_019697|Kcnd2|16508|potassium voltage-gated channel, Shal-related family, member 2
mm9_v1_chr17_+_34442837_34442976	2.47558	NKX3-2.p2	AK155968|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52642|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132165|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132163|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	AK160485|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52641|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X07239|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36940|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90032|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28489|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28490|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36939|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90275|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X00958|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M28408|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr7_+_135047561_135047646	2.47151	NKX3-2.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr8_+_28196312_28196323	2.47012	NKX3-2.p2	AF378759|Gpr124|78560|G protein-coupled receptor 124	NM_054044|Gpr124|78560|G protein-coupled receptor 124	BC138451|Gpr124|78560|G protein-coupled receptor 124	BC138452|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr17_-_35019039_35019055	2.46729	NKX3-2.p2	AK146812|C2|12263|complement component 2 (within H-2S)	NM_013484|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr8_+_98226914_98226962	2.45899	NKX3-2.p2	NM_001195006|Ndrg4|234593|N-myc downstream regulated gene 4	NM_145602|Ndrg4|234593|N-myc downstream regulated gene 4	AK168873|Ndrg4|234593|N-myc downstream regulated gene 4	AK090374|Ndrg4|234593|N-myc downstream regulated gene 4	AK144294|Ndrg4|234593|N-myc downstream regulated gene 4	BC006595|Ndrg4|234593|N-myc downstream regulated gene 4
mm9_v1_chr14_+_31692419_31692442	2.45127	NKX3-2.p2	NM_181390|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1
mm9_v1_chr3_-_84283349_84283412	2.44237	NKX3-2.p2	BC137632|Fhdc1|229474|FH2 domain containing 1	AK173244|Fhdc1|229474|FH2 domain containing 1
mm9_v1_chr3_+_63099408_63099509	2.42645	NKX3-2.p2	AK076908|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr3_+_79689897_79689949	2.42569	NKX3-2.p2	AF285091|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chrX_+_70728994_70729031	2.42177	NKX3-2.p2	BC052857|Bgn|12111|biglycan
mm9_v1_chr18_-_60760086_60760117	2.41672	NKX3-2.p2	AK034012|Synpo|104027|synaptopodin
mm9_v1_chr6_-_53770406_53770488	2.39692	NKX3-2.p2	AK122338|Tril|66873|TLR4 interactor with leucine-rich repeats	AK033401|Tril|66873|TLR4 interactor with leucine-rich repeats	AK004681|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr11_+_94189524_94189598	2.39453	NKX3-2.p2	AK017451|Ankrd40|71452|ankyrin repeat domain 40	L10902|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chr1_-_45982242_45982463	2.38381	NKX3-2.p2	AK008700|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF231120|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF215637|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF226613|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	BC003438|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159855|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK144780|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK147137|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159294|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK167608|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	NM_016917|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK033987|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1
mm9_v1_chr16_-_97832672_97832690	2.38371	NKX3-2.p2	AF113596|Tmprss2|50528|transmembrane protease, serine 2	AF243500|Tmprss2|50528|transmembrane protease, serine 2	AF199362|Tmprss2|50528|transmembrane protease, serine 2	AK146047|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr17_-_25377052_25377092	2.37949	NKX3-2.p2	BC055872|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	NM_172529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	BC023869|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK044021|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK078230|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AY465529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit
mm9_v1_chr12_+_81745254_81745279	2.37132	NKX3-2.p2	BC043112|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr1_-_121401172_121401233	2.36575	NKX3-2.p2	AK205791|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	BC006907|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AK017698|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AK033193|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AK172364|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)
mm9_v1_chr2_-_164682380_164682513	2.35953	NKX3-2.p2	CT010317|Pltp|18830|phospholipid transfer protein	U28960|Pltp|18830|phospholipid transfer protein
mm9_v1_chr13_+_3553690_3553705	2.35803	NKX3-2.p2	AK207166|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK213780|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr7_+_52882857_52882906	2.354	NKX3-2.p2	AK156602|Rasip1|69903|Ras interacting protein 1	BC127059|Rasip1|69903|Ras interacting protein 1	BC028483|Rasip1|69903|Ras interacting protein 1	BC150766|Rasip1|69903|Ras interacting protein 1	NM_028544|Rasip1|69903|Ras interacting protein 1
mm9_v1_chr16_+_43640198_43640217	2.34862	NKX3-2.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr7_-_25757430_25757522	2.34531	NKX3-2.p2	AK046109|Rabac1|14470|Rab acceptor 1 (prenylated)
mm9_v1_chr18_+_20823908_20823925	2.33626	NKX3-2.p2	AK018701|Ttr|22139|transthyretin	AK014454|Ttr|22139|transthyretin	AK075588|Ttr|22139|transthyretin	BC086926|Ttr|22139|transthyretin	D89076|Ttr|22139|transthyretin	X03351|Ttr|22139|transthyretin	AK050155|Ttr|22139|transthyretin	BC032069|Ttr|22139|transthyretin
mm9_v1_chrX_+_132779615_132779721	2.32933	NKX3-2.p2	NM_011712|Wbp5|22381|WW domain binding protein 5	AY459189|Wbp5|22381|WW domain binding protein 5	AK017717|Wbp5|22381|WW domain binding protein 5	AK002214|Wbp5|22381|WW domain binding protein 5	BC020289|Wbp5|22381|WW domain binding protein 5	BC007478|Wbp5|22381|WW domain binding protein 5
mm9_v1_chrX_+_97963061_97963090	2.32838	NKX3-2.p2	AK122474|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_001177778|Dlg3|53310|discs, large homolog 3 (Drosophila)	BC094368|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_016747|Dlg3|53310|discs, large homolog 3 (Drosophila)	D87117|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chrX_+_20539226_20539259	2.32488	NKX3-2.p2	AK038883|A230072C01Rik|320742|RIKEN cDNA A230072C01 gene
mm9_v1_chr2_+_84976516_84976632	2.3245	NKX3-2.p2	AK133580|Aplnr|23796|apelin receptor	NM_011784|Aplnr|23796|apelin receptor	BC039224|Aplnr|23796|apelin receptor	AK157582|Aplnr|23796|apelin receptor	AK087138|Aplnr|23796|apelin receptor	AK075706|Aplnr|23796|apelin receptor	AK052383|Aplnr|23796|apelin receptor	AK078374|Aplnr|23796|apelin receptor
mm9_v1_chr6_+_30589217_30589220	2.3217	NKX3-2.p2	BC052661|Cpa1|109697|carboxypeptidase A1	NM_025350|Cpa1|109697|carboxypeptidase A1
mm9_v1_chr18_+_23573977_23574064	2.31832	NKX3-2.p2	AF143543|Dtna|13527|dystrobrevin alpha	AK019477|Dtna|13527|dystrobrevin alpha	AK003829|Dtna|13527|dystrobrevin alpha	AF143542|Dtna|13527|dystrobrevin alpha	AF143544|Dtna|13527|dystrobrevin alpha
mm9_v1_chr2_-_173053287_173053316	2.31494	NKX3-2.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chrX_+_160577257_160577273	2.31127	NKX3-2.p2	NM_001130513|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr9_+_108197453_108197584	2.31069	NKX3-2.p2	
mm9_v1_chr2_+_152987036_152987075	2.30725	NKX3-2.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr2_-_25430363_25430452	2.30589	NKX3-2.p2	BC028657|Phpt1|75454|phosphohistidine phosphatase 1	AK005756|Phpt1|75454|phosphohistidine phosphatase 1	NM_029293|Phpt1|75454|phosphohistidine phosphatase 1	AK154580|Phpt1|75454|phosphohistidine phosphatase 1
mm9_v1_chr9_-_107612238_107612349	2.30383	NKX3-2.p2	AK140340|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm9_v1_chr7_+_135047661_135047661	2.30357	NKX3-2.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr11_+_43287798_43287813	2.30158	NKX3-2.p2	AK007683|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chr9_+_45178267_45178361	2.29968	NKX3-2.p2	NM_022004|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr14_+_47621014_47621039	2.29761	NKX3-2.p2	AK006299|Samd4|74480|sterile alpha motif domain containing 4	NM_001163433|Samd4|74480|sterile alpha motif domain containing 4	AK161277|Samd4|74480|sterile alpha motif domain containing 4	AK018954|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr6_-_137118238_137118241	2.29266	NKX3-2.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr2_+_121239658_121239718	2.2859	NKX3-2.p2	AK132459|Pdia3|14827|protein disulfide isomerase associated 3	AK088721|Pdia3|14827|protein disulfide isomerase associated 3	AK133799|Pdia3|14827|protein disulfide isomerase associated 3	AK167807|Pdia3|14827|protein disulfide isomerase associated 3	AK169611|Pdia3|14827|protein disulfide isomerase associated 3	M73329|Pdia3|14827|protein disulfide isomerase associated 3	BC003285|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr2_-_58419558_58419636	2.28508	NKX3-2.p2	L15436|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr6_+_122824491_122824588	2.28068	NKX3-2.p2	BC119133|Necap1|67602|NECAP endocytosis associated 1	BC120841|Necap1|67602|NECAP endocytosis associated 1	AK004805|Necap1|67602|NECAP endocytosis associated 1	AK081598|Necap1|67602|NECAP endocytosis associated 1	AK168500|Necap1|67602|NECAP endocytosis associated 1	NM_026267|Necap1|67602|NECAP endocytosis associated 1	BC011466|Necap1|67602|NECAP endocytosis associated 1	AK005263|Necap1|67602|NECAP endocytosis associated 1	BC098227|Necap1|67602|NECAP endocytosis associated 1	AK220236|Necap1|67602|NECAP endocytosis associated 1
mm9_v1_chr16_+_70314331_70314522	2.27542	NKX3-2.p2	NM_028803|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	BC017541|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK009815|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK013167|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK206164|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1
mm9_v1_chr4_+_104829951_104829954	2.27099	NKX3-2.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr7_+_31548774_31548942	2.26527	NKX3-2.p2	AK081753|Dmkn|73712|dermokine	NM_001166173|Dmkn|73712|dermokine	NM_001166174|Dmkn|73712|dermokine	NM_172899|Dmkn|73712|dermokine	BC064724|Dmkn|73712|dermokine	AY444557|Dmkn|73712|dermokine	AY622963|Dmkn|73712|dermokine
mm9_v1_chr10_+_79755175_79755234	2.25943	NKX3-2.p2	NM_009091|Rps15|20054|ribosomal protein S15	M33330|Rps15|20054|ribosomal protein S15	AK146147|Rps15|20054|ribosomal protein S15	AK135319|Rps15|20054|ribosomal protein S15
mm9_v1_chrX_+_10173557_10173565	2.24511	NKX3-2.p2	
mm9_v1_chr6_+_29809595_29809632	2.24203	NKX3-2.p2	NM_001171001|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	AK053527|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr2_-_119980210_119980230	2.24085	NKX3-2.p2	AB239915|Ehd4|98878|EH-domain containing 4	AB239916|Ehd4|98878|EH-domain containing 4	AF173639|Ehd4|98878|EH-domain containing 4
mm9_v1_chr15_-_100518324_100518351	2.24048	NKX3-2.p2	BC011218|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007931|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007392|Cela1|109901|chymotrypsin-like elastase family, member 1	NM_033612|Cela1|109901|chymotrypsin-like elastase family, member 1
mm9_v1_chr17_-_35018943_35019021	2.23913	NKX3-2.p2	M57891|C2|12263|complement component 2 (within H-2S)	BC011086|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr2_+_164312087_164312169	2.2286	NKX3-2.p2	AK013571|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr3_-_151856766_151856837	2.22396	NKX3-2.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr7_-_116688776_116688863	2.21965	NKX3-2.p2	BC030391|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr2_-_119980243_119980354	2.2115	NKX3-2.p2	BC012272|Ehd4|98878|EH-domain containing 4	AK149760|Ehd4|98878|EH-domain containing 4	AK163835|Ehd4|98878|EH-domain containing 4	AK147186|Ehd4|98878|EH-domain containing 4	AK159235|Ehd4|98878|EH-domain containing 4	AK159597|Ehd4|98878|EH-domain containing 4	NM_133838|Ehd4|98878|EH-domain containing 4	AK166101|Ehd4|98878|EH-domain containing 4	AK169343|Ehd4|98878|EH-domain containing 4
mm9_v1_chr7_+_112789041_112789105	2.20871	NKX3-2.p2	BC009158|Fxc1|14356|fractured callus expressed transcript 1	NM_019502|Fxc1|14356|fractured callus expressed transcript 1	AK003368|Fxc1|14356|fractured callus expressed transcript 1	AK003421|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr13_-_93564652_93564772	2.20251	NKX3-2.p2	BC139414|Thbs4|21828|thrombospondin 4	AF102887|Thbs4|21828|thrombospondin 4	NM_011582|Thbs4|21828|thrombospondin 4
mm9_v1_chr3_+_129539656_129539716	2.19878	NKX3-2.p2	NM_007686|Cfi|12630|complement component factor i	U47810|Cfi|12630|complement component factor i	BC150751|Cfi|12630|complement component factor i
mm9_v1_chr1_-_170085798_170085873	2.19704	NKX3-2.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr6_+_97160736_97160744	2.19212	NKX3-2.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr1_-_174221511_174221528	2.18491	NKX3-2.p2	BC041774|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr15_-_83002561_83002610	2.1815	NKX3-2.p2	AF332059|Cyb5r3|109754|cytochrome b5 reductase 3	AF332060|Cyb5r3|109754|cytochrome b5 reductase 3	AK002640|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr2_+_151931465_151931476	2.17886	NKX3-2.p2	AK089976|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK159226|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	NM_029688|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK159613|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK007296|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)
mm9_v1_chr7_-_149838254_149838314	2.17786	NKX3-2.p2	AK146531|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr14_+_63752151_63752250	2.1734	NKX3-2.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr11_+_43287820_43287845	2.16819	NKX3-2.p2	NM_026979|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chr2_+_157385835_157385932	2.16608	NKX3-2.p2	AK003004|Nnat|18111|neuronatin	AK077465|Nnat|18111|neuronatin	AK160626|Nnat|18111|neuronatin	NM_010923|Nnat|18111|neuronatin	NM_180960|Nnat|18111|neuronatin	X83569|Nnat|18111|neuronatin	X83570|Nnat|18111|neuronatin	BC036984|Nnat|18111|neuronatin	AB004048|Nnat|18111|neuronatin	X83568|Nnat|18111|neuronatin
mm9_v1_chr8_-_42219037_42219129	2.16451	NKX3-2.p2	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr16_-_97832640_97832650	2.15813	NKX3-2.p2	BC038393|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr6_-_137118197_137118219	2.15757	NKX3-2.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr6_-_78418862_78418867	2.15748	NKX3-2.p2	AK008446|Reg3g|19695|regenerating islet-derived 3 gamma	AK008608|Reg3g|19695|regenerating islet-derived 3 gamma	BC061139|Reg3g|19695|regenerating islet-derived 3 gamma	D63361|Reg3g|19695|regenerating islet-derived 3 gamma	NM_011260|Reg3g|19695|regenerating islet-derived 3 gamma
mm9_v1_chr1_-_176851949_176851953	2.1515	NKX3-2.p2	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr4_+_84851330_84851416	2.14284	NKX3-2.p2	AK044370|Sh3gl2|20404|SH3-domain GRB2-like 2	BC018385|Sh3gl2|20404|SH3-domain GRB2-like 2	NM_019535|Sh3gl2|20404|SH3-domain GRB2-like 2	AK043424|Sh3gl2|20404|SH3-domain GRB2-like 2	AK139337|Sh3gl2|20404|SH3-domain GRB2-like 2	U58886|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr12_-_8505780_8505995	2.14237	NKX3-2.p2	AK215498|Rhob|11852|ras homolog gene family, member B	AK148834|Rhob|11852|ras homolog gene family, member B	AK184048|Rhob|11852|ras homolog gene family, member B	AK013784|Rhob|11852|ras homolog gene family, member B
mm9_v1_chr2_+_10075242_10075276	2.133	NKX3-2.p2	AK087428|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK134707|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK077381|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr1_+_137665517_137665641	2.13122	NKX3-2.p2	AK189460|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	AK195224|Phlda3|27280|pleckstrin homology-like domain, family A, member 3
mm9_v1_chr10_+_21601968_21601989	2.13103	NKX3-2.p2	BC070401|Sgk1|20393|serum/glucocorticoid regulated kinase 1	NM_001161845|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chrX_-_49518428_49518445	2.1298	NKX3-2.p2	X83577|Gpc4|14735|glypican 4
mm9_v1_chr9_+_45178485_45178507	2.12878	NKX3-2.p2	BC051127|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK003888|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr7_-_29965655_29965691	2.12501	NKX3-2.p2	NM_026545|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr11_-_20731016_20731238	2.12173	NKX3-2.p2	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr7_-_126138689_126138754	2.12101	NKX3-2.p2	NM_001195774|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	NM_022420|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr2_+_90780614_90780617	2.11977	NKX3-2.p2	NM_017368|Celf1|13046|CUGBP, Elav-like family member 1	NM_198683|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr2_+_138082301_138082378	2.11617	NKX3-2.p2	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr8_-_87549120_87549191	2.11432	NKX3-2.p2	BC016453|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	BC083335|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AF039405|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	NM_019652|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK007827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK171690|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr9_-_122203459_122203477	2.11363	NKX3-2.p2	BC099688|Ano10|102566|anoctamin 10
mm9_v1_chr17_+_35959345_35959389	2.11245	NKX3-2.p2	
mm9_v1_chr18_-_60760126_60760150	2.11146	NKX3-2.p2	AK049810|Synpo|104027|synaptopodin
mm9_v1_chr15_-_37162666_37162676	2.10513	NKX3-2.p2	AK017454|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr4_+_42625654_42625690	2.09892	NKX3-2.p2	BC087957|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	NM_001193666|Gm13304|100504346|predicted gene 13304	NM_001193668|Gm10591|100504239|predicted gene 10591	NM_023052|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011335|Ccl21b|100042493|chemokine (C-C motif) ligand 21B (leucine)	U88322|Ccl21c|65956|chemokine (C-C motif) ligand 21C (leucine)
mm9_v1_chr2_+_151368331_151368443	2.09367	NKX3-2.p2	AK002777|Fkbp1a|14225|FK506 binding protein 1a	X60203|Fkbp1a|14225|FK506 binding protein 1a	BC004671|Fkbp1a|14225|FK506 binding protein 1a	AK154751|Fkbp1a|14225|FK506 binding protein 1a	AK169186|Fkbp1a|14225|FK506 binding protein 1a	AB241120|Fkbp1a|14225|FK506 binding protein 1a	AB241121|Fkbp1a|14225|FK506 binding protein 1a	AB241122|Fkbp1a|14225|FK506 binding protein 1a	AF483488|Fkbp1a|14225|FK506 binding protein 1a	AF483489|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chr18_+_23573908_23573935	2.08235	NKX3-2.p2	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr9_+_50302624_50302649	2.08157	NKX3-2.p2	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr9_+_75161942_75162049	2.07605	NKX3-2.p2	AK169323|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK050564|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK148175|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	L34290|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	NM_138719|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr5_-_150438856_150438925	2.07581	NKX3-2.p2	AK165046|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK160824|Hsph1|15505|heat shock 105kDa/110kDa protein 1	NM_013559|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr7_+_137836279_137836292	2.07493	NKX3-2.p2	AK165603|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr6_+_113421513_113421567	2.07408	NKX3-2.p2	AF458066|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr11_-_55233354_55233357	2.07169	NKX3-2.p2	BC004638|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr17_+_34442808_34442831	2.07074	NKX3-2.p2	NM_010382|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr13_-_36826104_36826206	2.06372	NKX3-2.p2	AK003046|Nrn1|68404|neuritin 1
mm9_v1_chr3_-_151856716_151856729	2.06295	NKX3-2.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr7_-_112788821_112788929	2.05417	NKX3-2.p2	BC028310|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC013794|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC022942|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK009100|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK154772|Arfip2|76932|ADP-ribosylation factor interacting protein 2	NM_029802|Arfip2|76932|ADP-ribosylation factor interacting protein 2
mm9_v1_chr7_-_104727924_104728026	2.0463	NKX3-2.p2	BC026557|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	AK007717|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	AK008195|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	AK007558|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	BC062811|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	NM_001177945|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	NM_001177946|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	NM_001177947|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene	NM_183251|1810020D17Rik|66273|RIKEN cDNA 1810020D17 gene
mm9_v1_chr16_-_56886260_56886287	2.03267	NKX3-2.p2	AK049837|Tmem45a|56277|transmembrane protein 45a	NM_019631|Tmem45a|56277|transmembrane protein 45a	AK081478|Tmem45a|56277|transmembrane protein 45a	BC064715|Tmem45a|56277|transmembrane protein 45a
mm9_v1_chr11_-_76592473_76592508	2.03018	NKX3-2.p2	AK052903|Cpd|12874|carboxypeptidase D
mm9_v1_chr11_-_60040448_60040491	2.02386	NKX3-2.p2	AK013538|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chrX_-_149471740_149472145	2.02276	NKX3-2.p2	AK008349|Mageh1|75625|melanoma antigen, family H, 1	AF319981|Mageh1|75625|melanoma antigen, family H, 1	BC058380|Mageh1|75625|melanoma antigen, family H, 1	BC051935|Mageh1|75625|melanoma antigen, family H, 1	BC060080|Mageh1|75625|melanoma antigen, family H, 1	AK145866|Mageh1|75625|melanoma antigen, family H, 1	NM_023788|Mageh1|75625|melanoma antigen, family H, 1	AK000896|Mageh1|75625|melanoma antigen, family H, 1
mm9_v1_chr12_+_81744869_81744959	2.02174	NKX3-2.p2	BC058649|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr14_-_104243379_104243389	2.01196	NKX3-2.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr16_+_92301516_92301565	2.01034	NKX3-2.p2	AK004538|Fam165b|68936|family with sequence similarity 165, member B	NM_138743|Fam165b|68936|family with sequence similarity 165, member B	AY033901|Fam165b|68936|family with sequence similarity 165, member B	BC005668|Fam165b|68936|family with sequence similarity 165, member B
mm9_v1_chr17_-_23877115_23877392	2.00929	NKX3-2.p2	AK044092|Paqr4|76498|progestin and adipoQ receptor family member IV	AB041564|Paqr4|76498|progestin and adipoQ receptor family member IV	AY424293|Paqr4|76498|progestin and adipoQ receptor family member IV	BC026921|Paqr4|76498|progestin and adipoQ receptor family member IV	AK152676|Paqr4|76498|progestin and adipoQ receptor family member IV	BC011185|Paqr4|76498|progestin and adipoQ receptor family member IV	NM_023824|Paqr4|76498|progestin and adipoQ receptor family member IV	AK033625|Paqr4|76498|progestin and adipoQ receptor family member IV	AK005142|Paqr4|76498|progestin and adipoQ receptor family member IV	AK044486|Paqr4|76498|progestin and adipoQ receptor family member IV
mm9_v1_chr7_-_96666081_96666131	2.00845	NKX3-2.p2	NM_029614|Prss23|76453|protease, serine, 23
mm9_v1_chr9_-_21116703_21116742	2.00236	NKX3-2.p2	BC003704|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK160161|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr2_+_145686480_145686484	2.00201	NKX3-2.p2	AK171064|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr7_+_134355120_134355124	2.00076	NKX3-2.p2	AK010483|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle	NM_016754|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle
mm9_v1_chr2_+_156546758_156546851	2.00053	NKX3-2.p2	AK089484|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK150554|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK156212|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK211649|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AF073935|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr18_-_60783946_60784004	2.00005	NKX3-2.p2	AK154958|Synpo|104027|synaptopodin	NM_177340|Synpo|104027|synaptopodin
mm9_v1_chr10_+_85763294_85763302	1.99766	NKX3-2.p2	AK082483|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK128943|Timp3|21859|tissue inhibitor of metalloproteinase 3	AB041611|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK083905|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK147847|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr7_+_28914482_28914484	1.99464	NKX3-2.p2	AK035473|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	AK035528|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	NM_001164655|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene
mm9_v1_chr2_+_35413977_35414092	1.9939	NKX3-2.p2	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr10_+_127472401_127472401	1.99125	NKX3-2.p2	NM_001113199|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	NM_013608|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr16_+_23107828_23107844	1.99105	NKX3-2.p2	X12507|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK076509|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK132969|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK165898|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK088669|Eif4a2|13682|eukaryotic translation initiation factor 4A2	BC094422|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr6_+_49772688_49772727	1.98917	NKX3-2.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr19_+_5475020_5475097	1.98736	NKX3-2.p2	AF104223|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chr18_-_15562126_15562266	1.98653	NKX3-2.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr9_+_47970096_47970197	1.97933	NKX3-2.p2	AK021362|Fam55d|244853|family with sequence similarity 55, member D	AK048132|Fam55d|244853|family with sequence similarity 55, member D	BC094249|Fam55d|244853|family with sequence similarity 55, member D	NM_172921|Fam55d|244853|family with sequence similarity 55, member D
mm9_v1_chr1_+_171585621_171585677	1.97692	NKX3-2.p2	AK004165|Rgs5|19737|regulator of G-protein signaling 5	AK028765|Rgs5|19737|regulator of G-protein signaling 5	AK030300|Rgs5|19737|regulator of G-protein signaling 5	AK044096|Rgs5|19737|regulator of G-protein signaling 5	AK054098|Rgs5|19737|regulator of G-protein signaling 5	NM_009063|Rgs5|19737|regulator of G-protein signaling 5	BC037683|Rgs5|19737|regulator of G-protein signaling 5	U67188|Rgs5|19737|regulator of G-protein signaling 5
mm9_v1_chr8_-_28339053_28339060	1.96981	NKX3-2.p2	AK143775|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr9_+_40494347_40494411	1.96854	NKX3-2.p2	AY326421|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr18_+_37834003_37834149	1.96321	NKX3-2.p2	AY013797|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr2_+_83564553_83564598	1.96181	NKX3-2.p2	NM_008402|Itgav|16410|integrin alpha V
mm9_v1_chr7_+_138175581_138175593	1.9612	NKX3-2.p2	BC049835|Dmbt1|12945|deleted in malignant brain tumors 1	NM_007769|Dmbt1|12945|deleted in malignant brain tumors 1	U37438|Dmbt1|12945|deleted in malignant brain tumors 1	AB005909|Dmbt1|12945|deleted in malignant brain tumors 1
mm9_v1_chr11_+_56825192_56825257	1.9493	NKX3-2.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr9_-_122203483_122203525	1.94898	NKX3-2.p2	AK046091|Ano10|102566|anoctamin 10	AK079622|Ano10|102566|anoctamin 10	AK080947|Ano10|102566|anoctamin 10	NM_133979|Ano10|102566|anoctamin 10	AK043011|Ano10|102566|anoctamin 10	AK138414|Ano10|102566|anoctamin 10
mm9_v1_chr5_-_44492908_44492976	1.94667	NKX3-2.p2	AF026269|Prom1|19126|prominin 1	AF039663|Prom1|19126|prominin 1	NM_001163577|Prom1|19126|prominin 1	NM_008935|Prom1|19126|prominin 1
mm9_v1_chr9_-_103132606_103132682	1.94137	NKX3-2.p2	BC012313|Trf|22041|transferrin	NM_133977|Trf|22041|transferrin	AK150782|Trf|22041|transferrin
mm9_v1_chr7_+_125777249_125777358	1.93991	NKX3-2.p2	AY263159|Tmc5|74424|transmembrane channel-like gene family 5	NM_028930|Tmc5|74424|transmembrane channel-like gene family 5	AK016573|Tmc5|74424|transmembrane channel-like gene family 5	AY236495|Tmc5|74424|transmembrane channel-like gene family 5
mm9_v1_chr6_+_83129579_83129623	1.9349	NKX3-2.p2	AK162846|Dctn1|13191|dynactin 1	AK157867|Dctn1|13191|dynactin 1	NM_007835|Dctn1|13191|dynactin 1
mm9_v1_chr16_-_52452766_52452798	1.92739	NKX3-2.p2	AY644766|Alcam|11658|activated leukocyte cell adhesion molecule	BC027280|Alcam|11658|activated leukocyte cell adhesion molecule	AB003026|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr10_-_70747929_70748034	1.92668	NKX3-2.p2	AK144468|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK043167|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	BC019464|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK148364|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	NM_145420|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)
mm9_v1_chr2_+_152987262_152987297	1.9235	NKX3-2.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr19_-_7054901_7054955	1.91919	NKX3-2.p2	BC031824|Fkbp2|14227|FK506 binding protein 2	BC053692|Fkbp2|14227|FK506 binding protein 2	AK144284|Fkbp2|14227|FK506 binding protein 2	AK165394|Fkbp2|14227|FK506 binding protein 2	NM_008020|Fkbp2|14227|FK506 binding protein 2	NM_001166368|Fkbp2|14227|FK506 binding protein 2
mm9_v1_chr17_-_45724536_45724608	1.90608	NKX3-2.p2	AK198320|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK212529|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr8_+_120807674_120807696	1.90094	NKX3-2.p2	AK034995|Cdh13|12554|cadherin 13	AK085939|Cdh13|12554|cadherin 13	AK029195|Cdh13|12554|cadherin 13	AK134649|Cdh13|12554|cadherin 13
mm9_v1_chr4_-_147310804_147310884	1.89969	NKX3-2.p2	BC006599|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AF046782|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK131632|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK137480|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK157729|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK160822|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	NM_011122|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm9_v1_chr6_+_30758582_30758676	1.89831	NKX3-2.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr11_+_52202137_52202376	1.89818	NKX3-2.p2	AK217498|Vdac1|22333|voltage-dependent anion channel 1	AK210208|Vdac1|22333|voltage-dependent anion channel 1	AK215454|Vdac1|22333|voltage-dependent anion channel 1	AK207573|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chrX_+_131252542_131252558	1.89697	NKX3-2.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr15_-_34608840_34608966	1.894	NKX3-2.p2	AK079085|Nipal2|223473|NIPA-like domain containing 2	BC030399|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chrX_+_131252456_131252527	1.89179	NKX3-2.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr5_-_31210160_31210170	1.88806	NKX3-2.p2	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr6_-_142519807_142519890	1.87891	NKX3-2.p2	D88159|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK156346|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	NM_008428|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK031777|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8
mm9_v1_chr6_+_97160749_97160814	1.87855	NKX3-2.p2	AF421860|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK077826|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	NM_022992|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK076519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK088205|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF133912|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	BC003897|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK008519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK005259|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF265214|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr10_-_24919916_24919967	1.87476	NKX3-2.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr11_+_100277007_100277076	1.87364	NKX3-2.p2	NM_001163481|Fkbp10|14230|FK506 binding protein 10	NM_010221|Fkbp10|14230|FK506 binding protein 10	L07063|Fkbp10|14230|FK506 binding protein 10	AK144185|Fkbp10|14230|FK506 binding protein 10	BC029546|Fkbp10|14230|FK506 binding protein 10	AK019446|Fkbp10|14230|FK506 binding protein 10
mm9_v1_chr1_-_121401236_121401390	1.86977	NKX3-2.p2	AK159993|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AF174296|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	NM_022327|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)
mm9_v1_chr2_+_151931424_151931452	1.86725	NKX3-2.p2	AK161066|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	BC011325|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)
mm9_v1_chr5_+_104868321_104868417	1.86385	NKX3-2.p2	BC014284|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr3_+_128902822_128902860	1.86099	NKX3-2.p2	AB006321|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_011098|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042504|Pitx2|18741|paired-like homeodomain transcription factor 2	U80011|Pitx2|18741|paired-like homeodomain transcription factor 2	U80036|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048723|Pitx2|18741|paired-like homeodomain transcription factor 2	U80010|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr19_-_60950373_60950471	1.86066	NKX3-2.p2	AK002448|Prdx3|11757|peroxiredoxin 3	BC005626|Prdx3|11757|peroxiredoxin 3	M28723|Prdx3|11757|peroxiredoxin 3	NM_007452|Prdx3|11757|peroxiredoxin 3
mm9_v1_chr2_-_30061218_30061328	1.86	NKX3-2.p2	BC052047|Ccbl1|70266|cysteine conjugate-beta lyase 1	NM_172404|Ccbl1|70266|cysteine conjugate-beta lyase 1	AK163165|Ccbl1|70266|cysteine conjugate-beta lyase 1	BC016206|Ccbl1|70266|cysteine conjugate-beta lyase 1	AK088404|Ccbl1|70266|cysteine conjugate-beta lyase 1
mm9_v1_chr4_-_115840142_115840210	1.8599	NKX3-2.p2	BC003448|Tspan1|66805|tetraspanin 1	AK007428|Tspan1|66805|tetraspanin 1	AK078869|Tspan1|66805|tetraspanin 1	AK162521|Tspan1|66805|tetraspanin 1	NM_133681|Tspan1|66805|tetraspanin 1
mm9_v1_chr5_+_89316245_89316323	1.85979	NKX3-2.p2	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chrX_+_97972559_97972657	1.85791	NKX3-2.p2	NM_001177780|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK159655|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK167365|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK148464|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr5_-_75073816_75073896	1.85012	NKX3-2.p2	AF034746|Lnx1|16924|ligand of numb-protein X 1	BC139771|Lnx1|16924|ligand of numb-protein X 1	AK044127|Lnx1|16924|ligand of numb-protein X 1	BC040367|Lnx1|16924|ligand of numb-protein X 1	AK161194|Lnx1|16924|ligand of numb-protein X 1	AK138326|Lnx1|16924|ligand of numb-protein X 1	NM_001159578|Lnx1|16924|ligand of numb-protein X 1	NM_001159579|Lnx1|16924|ligand of numb-protein X 1	NM_001159580|Lnx1|16924|ligand of numb-protein X 1	NM_010727|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr19_-_38199112_38199170	1.83513	NKX3-2.p2	M74527|Rbp4|19662|retinol binding protein 4, plasma	U63146|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr7_-_147302283_147302359	1.83059	NKX3-2.p2	BC002178|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC026722|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK167404|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK088018|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK086762|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK154752|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK044954|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK040391|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	NM_053119|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC072658|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC033275|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm9_v1_chr9_+_70526985_70526997	1.8276	NKX3-2.p2	AF011379|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr6_+_34548512_34548642	1.82179	NKX3-2.p2	AK032849|Cald1|109624|caldesmon 1	AK050642|Cald1|109624|caldesmon 1	BC055908|Cald1|109624|caldesmon 1
mm9_v1_chr3_-_108365251_108365316	1.8197	NKX3-2.p2	AK046697|Tmem167b|67495|transmembrane protein 167B	BC050932|Tmem167b|67495|transmembrane protein 167B	AK008415|Tmem167b|67495|transmembrane protein 167B	BC055449|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr9_-_30729990_30730036	1.81914	NKX3-2.p2	BC094677|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15	NM_001024139|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm9_v1_chrX_+_82293610_82293751	1.81742	NKX3-2.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr19_-_4269096_4269129	1.8143	NKX3-2.p2	AK164662|Ssh3|245857|slingshot homolog 3 (Drosophila)
mm9_v1_chr2_+_84890611_84890701	1.8128	NKX3-2.p2	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr17_-_57387033_57387124	1.80961	NKX3-2.p2	AK047364|Gpr108|78308|G protein-coupled receptor 108	AF376726|Gpr108|78308|G protein-coupled receptor 108	AX775897|Gpr108|78308|G protein-coupled receptor 108	AK082797|Gpr108|78308|G protein-coupled receptor 108	BC016104|Gpr108|78308|G protein-coupled receptor 108	NM_030084|Gpr108|78308|G protein-coupled receptor 108	AK159313|Gpr108|78308|G protein-coupled receptor 108	AK170948|Gpr108|78308|G protein-coupled receptor 108	AK171030|Gpr108|78308|G protein-coupled receptor 108	AX775895|Gpr108|78308|G protein-coupled receptor 108
mm9_v1_chr18_-_33623668_33623692	1.80809	NKX3-2.p2	NM_001109988|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr14_-_46277274_46277306	1.80366	NKX3-2.p2	AK048690|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr4_+_41709182_41709267	1.8007	NKX3-2.p2	NM_010549|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	X74953|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	BC057664|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	AK143811|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr16_+_23107538_23107551	1.80062	NKX3-2.p2	NM_001123037|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_001123038|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_013506|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr5_-_143667004_143667334	1.79952	NKX3-2.p2	AK218610|Actb|11461|actin, beta	AK206771|Actb|11461|actin, beta	AK208252|Actb|11461|actin, beta	AK202772|Actb|11461|actin, beta	M12481|Actb|11461|actin, beta	X03765|Actb|11461|actin, beta	EF095208|Actb|11461|actin, beta
mm9_v1_chr8_+_97296110_97296164	1.79562	NKX3-2.p2	BC054838|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC057891|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC006650|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK040220|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AF010586|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	U92565|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr11_-_65601657_65601750	1.79223	NKX3-2.p2	AK187893|Map2k4|26398|mitogen-activated protein kinase kinase 4	U18310|Map2k4|26398|mitogen-activated protein kinase kinase 4
mm9_v1_chr5_+_122841885_122841976	1.78759	NKX3-2.p2	AK003485|Arpc3|56378|actin related protein 2/3 complex, subunit 3	AK005437|Arpc3|56378|actin related protein 2/3 complex, subunit 3	AK171651|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC013618|Arpc3|56378|actin related protein 2/3 complex, subunit 3	NM_019824|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC054440|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC055036|Arpc3|56378|actin related protein 2/3 complex, subunit 3
mm9_v1_chr6_+_113421448_113421463	1.78644	NKX3-2.p2	NM_134159|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr18_-_14002490_14002628	1.77112	NKX3-2.p2	BC023458|Zfp521|225207|zinc finger protein 521
mm9_v1_chr11_-_120587426_120587428	1.76781	NKX3-2.p2	
mm9_v1_chr19_+_20676453_20676504	1.76532	NKX3-2.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr11_-_6100141_6100160	1.76476	NKX3-2.p2	BC037090|Nudcd3|209586|NudC domain containing 3	AK050476|Nudcd3|209586|NudC domain containing 3	EU350933|Nudcd3|209586|NudC domain containing 3	AK036694|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr9_-_103119803_103119823	1.76265	NKX3-2.p2	M23015|Trf|22041|transferrin	S67218|Trf|22041|transferrin
mm9_v1_chr12_+_52792192_52792204	1.74732	NKX3-2.p2	BC053339|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1	AK005283|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1
mm9_v1_chr16_-_5222354_5222385	1.73934	NKX3-2.p2	BC150828|AU021092|239691|expressed sequence AU021092	BC171979|AU021092|239691|expressed sequence AU021092	AK140126|AU021092|239691|expressed sequence AU021092
mm9_v1_chr10_+_51953451_51953613	1.73909	NKX3-2.p2	AK014521|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1
mm9_v1_chr11_+_43247235_43247249	1.73511	NKX3-2.p2	AK047597|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr15_-_37162895_37162925	1.73208	NKX3-2.p2	AK005410|Gm16136|100379659|predicted gene 16136
mm9_v1_chr13_+_46597461_46597559	1.72245	NKX3-2.p2	AK049813|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	BC050752|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK013331|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK033071|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK010235|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr18_+_61085283_61085301	1.71404	NKX3-2.p2	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr2_+_52716901_52716906	1.70926	NKX3-2.p2	NM_172409|Fmnl2|71409|formin-like 2
mm9_v1_chr4_-_60514761_60514831	1.70869	NKX3-2.p2	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	M16355|Mup1|17840|major urinary protein 1	NM_001163010|Mup1|17840|major urinary protein 1	NM_001163011|Mup1|17840|major urinary protein 1	NM_031188|Mup1|17840|major urinary protein 1
mm9_v1_chr7_+_30954893_30954940	1.70445	NKX3-2.p2	AK046598|Gm5113|330503|predicted gene 5113	AK147880|Gm5113|330503|predicted gene 5113	NM_001033540|Gm5113|330503|predicted gene 5113
mm9_v1_chr10_+_127774845_127774868	1.70396	NKX3-2.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr12_-_110098804_110098955	1.70371	NKX3-2.p2	AK185973|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr18_+_61085303_61085326	1.69343	NKX3-2.p2	BC031745|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr4_+_129725083_129725205	1.69317	NKX3-2.p2	NM_028266|Col16a1|107581|collagen, type XVI, alpha 1	AK051511|Col16a1|107581|collagen, type XVI, alpha 1	AK040971|Col16a1|107581|collagen, type XVI, alpha 1	AK142403|Col16a1|107581|collagen, type XVI, alpha 1	BC027766|Col16a1|107581|collagen, type XVI, alpha 1
mm9_v1_chr3_-_51212856_51212915	1.69171	NKX3-2.p2	BC051933|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	AK003365|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	AK018705|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	AK028011|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	BC092141|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	AK009393|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	NM_025523|Ndufc1|66377|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1
mm9_v1_chr2_+_109731003_109731053	1.68797	NKX3-2.p2	AK135810|Lin7c|22343|lin-7 homolog C (C. elegans)	AK083299|Lin7c|22343|lin-7 homolog C (C. elegans)	AK015399|Lin7c|22343|lin-7 homolog C (C. elegans)	AK078923|Lin7c|22343|lin-7 homolog C (C. elegans)	AK128989|Lin7c|22343|lin-7 homolog C (C. elegans)	BC052471|Lin7c|22343|lin-7 homolog C (C. elegans)	AK133531|Lin7c|22343|lin-7 homolog C (C. elegans)	AF173083|Lin7c|22343|lin-7 homolog C (C. elegans)	AF087695|Lin7c|22343|lin-7 homolog C (C. elegans)	BC046966|Lin7c|22343|lin-7 homolog C (C. elegans)	NM_011699|Lin7c|22343|lin-7 homolog C (C. elegans)	AK161076|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr19_+_7070609_7070822	1.68505	NKX3-2.p2	AK038830|Trpt1|107328|tRNA phosphotransferase 1	NM_153597|Trpt1|107328|tRNA phosphotransferase 1	AK090183|Trpt1|107328|tRNA phosphotransferase 1	AK141582|Trpt1|107328|tRNA phosphotransferase 1	BC027575|Trpt1|107328|tRNA phosphotransferase 1
mm9_v1_chr7_-_25757587_25757746	1.68372	NKX3-2.p2	L40934|Rabac1|14470|Rab acceptor 1 (prenylated)	AK009726|Rabac1|14470|Rab acceptor 1 (prenylated)	AK150681|Rabac1|14470|Rab acceptor 1 (prenylated)	AK008559|Rabac1|14470|Rab acceptor 1 (prenylated)	AF252856|Rabac1|14470|Rab acceptor 1 (prenylated)	AF120162|Rabac1|14470|Rab acceptor 1 (prenylated)	BC008242|Rabac1|14470|Rab acceptor 1 (prenylated)	AK170289|Rabac1|14470|Rab acceptor 1 (prenylated)	NM_010261|Rabac1|14470|Rab acceptor 1 (prenylated)
mm9_v1_chr5_-_52957466_52957483	1.67945	NKX3-2.p2	AK122570|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr4_+_118906433_118906436	1.67939	NKX3-2.p2	NM_001042411|Lepre1|56401|leprecan 1	AK159505|Lepre1|56401|leprecan 1
mm9_v1_chr13_-_55423246_55423342	1.67849	NKX3-2.p2	BC028872|Rab24|19336|RAB24, member RAS oncogene family	BC055894|Rab24|19336|RAB24, member RAS oncogene family	BC055914|Rab24|19336|RAB24, member RAS oncogene family	BC019950|Rab24|19336|RAB24, member RAS oncogene family	BC054466|Rab24|19336|RAB24, member RAS oncogene family	AK007602|Rab24|19336|RAB24, member RAS oncogene family	AK160309|Rab24|19336|RAB24, member RAS oncogene family	NM_009000|Rab24|19336|RAB24, member RAS oncogene family
mm9_v1_chr8_+_114464581_114464637	1.67513	NKX3-2.p2	AK013563|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK134873|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AF190644|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	BC081436|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	NM_026693|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK002596|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK049819|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr3_-_105763165_105763165	1.67243	NKX3-2.p2	BC087882|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	NM_009725|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr3_-_113159420_113159575	1.67076	NKX3-2.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr10_+_79353650_79353664	1.66583	NKX3-2.p2	AK143817|Cfd|11537|complement factor D (adipsin)	M11768|Cfd|11537|complement factor D (adipsin)
mm9_v1_chr18_+_20823750_20823857	1.66581	NKX3-2.p2	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr3_-_96001504_96001550	1.6607	NKX3-2.p2	BC027558|Bola1|69168|bolA-like 1 (E. coli)	AK007718|Bola1|69168|bolA-like 1 (E. coli)	NM_026975|Bola1|69168|bolA-like 1 (E. coli)
mm9_v1_chr4_+_86221615_86221621	1.6576	NKX3-2.p2	BC037615|Rraga|68441|Ras-related GTP binding A
mm9_v1_chr16_-_20716002_20716191	1.65356	NKX3-2.p2	AK155104|Clcn2|12724|chloride channel 2	AK171231|Clcn2|12724|chloride channel 2	BC120699|Clcn2|12724|chloride channel 2	BC137625|Clcn2|12724|chloride channel 2	AF139724|Clcn2|12724|chloride channel 2	AF097415|Clcn2|12724|chloride channel 2	AK172148|Clcn2|12724|chloride channel 2
mm9_v1_chr1_+_75396650_75396733	1.65327	NKX3-2.p2	NM_001173477|Speg|11790|SPEG complex locus
mm9_v1_chr13_-_69138164_69138176	1.6523	NKX3-2.p2	BC037107|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr8_+_74092759_74092780	1.63999	NKX3-2.p2	AK040923|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr7_+_134355216_134355237	1.63895	NKX3-2.p2	AK003149|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle	BC055869|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle
mm9_v1_chr4_-_128798481_128798555	1.63873	NKX3-2.p2	BC049607|Hpca|15444|hippocalcin	NM_010471|Hpca|15444|hippocalcin	AK002992|Hpca|15444|hippocalcin
mm9_v1_chr3_-_88576415_88576522	1.63631	NKX3-2.p2	AK158745|Syt11|229521|synaptotagmin XI	AK144169|Syt11|229521|synaptotagmin XI	AK164082|Syt11|229521|synaptotagmin XI	BC054526|Syt11|229521|synaptotagmin XI	AK164368|Syt11|229521|synaptotagmin XI	NM_018804|Syt11|229521|synaptotagmin XI
mm9_v1_chr11_-_116167956_116168087	1.63575	NKX3-2.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chrX_+_33652066_33652189	1.62653	NKX3-2.p2	AK154675|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK089984|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC052425|Il13ra1|16164|interleukin 13 receptor, alpha 1	NM_133990|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK080147|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK143292|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK082889|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC059939|Il13ra1|16164|interleukin 13 receptor, alpha 1
mm9_v1_chr9_+_65524331_65524426	1.62459	NKX3-2.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr19_-_34316029_34316112	1.62298	NKX3-2.p2	AK080187|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK137170|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr7_+_94732677_94732677	1.61804	NKX3-2.p2	NM_001081414|Grm5|108071|glutamate receptor, metabotropic 5	NM_001143834|Grm5|108071|glutamate receptor, metabotropic 5
mm9_v1_chr13_-_115249048_115249158	1.617	NKX3-2.p2	AK079916|Fst|14313|follistatin
mm9_v1_chr13_-_36826245_36826363	1.61654	NKX3-2.p2	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr4_-_107743887_107743940	1.61583	NKX3-2.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr2_+_121239637_121239649	1.61432	NKX3-2.p2	NM_007952|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr13_-_69138229_69138235	1.61144	NKX3-2.p2	AK122432|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr2_-_157392026_157392132	1.60495	NKX3-2.p2	AB037891|Blcap|53619|bladder cancer associated protein homolog (human)	BC026935|Blcap|53619|bladder cancer associated protein homolog (human)	BC083339|Blcap|53619|bladder cancer associated protein homolog (human)	AK038884|Blcap|53619|bladder cancer associated protein homolog (human)	AK011673|Blcap|53619|bladder cancer associated protein homolog (human)	AK170338|Blcap|53619|bladder cancer associated protein homolog (human)	AK018127|Blcap|53619|bladder cancer associated protein homolog (human)	NM_016916|Blcap|53619|bladder cancer associated protein homolog (human)
mm9_v1_chr13_-_115892166_115892179	1.60443	NKX3-2.p2	AK035870|Itga1|109700|integrin alpha 1	NM_001033228|Itga1|109700|integrin alpha 1
mm9_v1_chr16_-_18413549_18413586	1.59104	NKX3-2.p2	NM_001111063|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr2_+_70499545_70499765	1.58872	NKX3-2.p2	NM_027352|Gorasp2|70231|golgi reassembly stacking protein 2	AK033413|Gorasp2|70231|golgi reassembly stacking protein 2	AK077683|Gorasp2|70231|golgi reassembly stacking protein 2	AK148337|Gorasp2|70231|golgi reassembly stacking protein 2	AK153555|Gorasp2|70231|golgi reassembly stacking protein 2	AK167823|Gorasp2|70231|golgi reassembly stacking protein 2	AK168928|Gorasp2|70231|golgi reassembly stacking protein 2	AK159469|Gorasp2|70231|golgi reassembly stacking protein 2	AK010664|Gorasp2|70231|golgi reassembly stacking protein 2	AK152603|Gorasp2|70231|golgi reassembly stacking protein 2	BC024982|Gorasp2|70231|golgi reassembly stacking protein 2	AK002515|Gorasp2|70231|golgi reassembly stacking protein 2	AK044691|Gorasp2|70231|golgi reassembly stacking protein 2	AK088239|Gorasp2|70231|golgi reassembly stacking protein 2	AK151843|Gorasp2|70231|golgi reassembly stacking protein 2	AK152475|Gorasp2|70231|golgi reassembly stacking protein 2	AK152544|Gorasp2|70231|golgi reassembly stacking protein 2	AK153049|Gorasp2|70231|golgi reassembly stacking protein 2	AK169382|Gorasp2|70231|golgi reassembly stacking protein 2	AK077153|Gorasp2|70231|golgi reassembly stacking protein 2	BC005600|Gorasp2|70231|golgi reassembly stacking protein 2	AK077706|Gorasp2|70231|golgi reassembly stacking protein 2
mm9_v1_chr15_+_54577256_54577521	1.58639	NKX3-2.p2	AK081944|Nov|18133|nephroblastoma overexpressed gene	AK081310|Nov|18133|nephroblastoma overexpressed gene	AK136407|Nov|18133|nephroblastoma overexpressed gene	AK155048|Nov|18133|nephroblastoma overexpressed gene	BC003774|Nov|18133|nephroblastoma overexpressed gene	NM_010930|Nov|18133|nephroblastoma overexpressed gene	X96585|Nov|18133|nephroblastoma overexpressed gene	AK039481|Nov|18133|nephroblastoma overexpressed gene	Y09257|Nov|18133|nephroblastoma overexpressed gene
mm9_v1_chr2_-_91771836_91771855	1.58589	NKX3-2.p2	M19662|Mdk|17242|midkine	NM_001012335|Mdk|17242|midkine
mm9_v1_chr8_+_120807621_120807654	1.58473	NKX3-2.p2	AK032409|Cdh13|12554|cadherin 13	AK039438|Cdh13|12554|cadherin 13	AB022100|Cdh13|12554|cadherin 13	BC021628|Cdh13|12554|cadherin 13	AK045201|Cdh13|12554|cadherin 13	AK048724|Cdh13|12554|cadherin 13	NM_019707|Cdh13|12554|cadherin 13
mm9_v1_chr11_-_6100164_6100207	1.57655	NKX3-2.p2	AK049739|Nudcd3|209586|NudC domain containing 3	AK171224|Nudcd3|209586|NudC domain containing 3	BC024322|Nudcd3|209586|NudC domain containing 3	AK046219|Nudcd3|209586|NudC domain containing 3	AK030050|Nudcd3|209586|NudC domain containing 3	AK159391|Nudcd3|209586|NudC domain containing 3	AK159458|Nudcd3|209586|NudC domain containing 3	AK170329|Nudcd3|209586|NudC domain containing 3	AK169797|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr11_-_118162557_118162687	1.57009	NKX3-2.p2	
mm9_v1_chr3_+_79690082_79690131	1.57003	NKX3-2.p2	BC056975|Fam198b|68659|family with sequence similarity 198, member B	EU797522|Fam198b|68659|family with sequence similarity 198, member B	AK143522|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr10_+_126921038_126921212	1.56973	NKX3-2.p2	BC023826|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr3_-_49561168_49561243	1.56935	NKX3-2.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr3_-_32264536_32264547	1.56289	NKX3-2.p2	AF012923|Zmat3|22401|zinc finger matrin type 3
mm9_v1_chr6_+_66846377_66846490	1.55623	NKX3-2.p2	NM_001177556|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177557|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177559|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177560|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_025278|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK005561|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	BC040685|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK162342|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166035|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK159872|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK148765|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK033422|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chrX_-_99447501_99447506	1.55585	NKX3-2.p2	AK148042|Cited1|12705|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1	U65091|Cited1|12705|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm9_v1_chr12_+_78339071_78339134	1.55512	NKX3-2.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chr12_-_93087514_93087619	1.55439	NKX3-2.p2	AF063095|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160936|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	BC026816|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005023|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK146022|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK161546|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160420|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005544|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK220502|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_001039089|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_011344|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)
mm9_v1_chr16_-_20716198_20716246	1.55249	NKX3-2.p2	AK165000|Clcn2|12724|chloride channel 2
mm9_v1_chr10_+_99478457_99478639	1.55079	NKX3-2.p2	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr16_+_23146631_23146693	1.54979	NKX3-2.p2	AK041214|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AX767957|Adipoq|11450|adiponectin, C1Q and collagen domain containing	U37222|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AK003138|Adipoq|11450|adiponectin, C1Q and collagen domain containing	BC028770|Adipoq|11450|adiponectin, C1Q and collagen domain containing
mm9_v1_chr14_+_35188650_35188769	1.54251	NKX3-2.p2	AK134285|Mmrn2|105450|multimerin 2	AK077884|Mmrn2|105450|multimerin 2	NM_153127|Mmrn2|105450|multimerin 2	AK078470|Mmrn2|105450|multimerin 2	BC034871|Mmrn2|105450|multimerin 2	BC145845|Mmrn2|105450|multimerin 2
mm9_v1_chr12_-_58647074_58647107	1.53809	NKX3-2.p2	BC096524|Foxa1|15375|forkhead box A1	NM_008259|Foxa1|15375|forkhead box A1
mm9_v1_chr6_-_92656148_92656177	1.53646	NKX3-2.p2	BC099897|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001081146|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr10_-_128063522_128063566	1.5308	NKX3-2.p2	BC100456|Rps26|27370|ribosomal protein S26	AK010689|Rps26|27370|ribosomal protein S26	AK008301|Rps26|27370|ribosomal protein S26	AK012722|Rps26|27370|ribosomal protein S26	AK018702|Rps26|27370|ribosomal protein S26	AK152132|Rps26|27370|ribosomal protein S26	NM_013765|Rps26|27370|ribosomal protein S26
mm9_v1_chr2_+_35516774_35517011	1.52892	NKX3-2.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr9_+_40590943_40591093	1.52817	NKX3-2.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr19_-_7061867_7061910	1.52332	NKX3-2.p2	U43837|Vegfb|22340|vascular endothelial growth factor B	AK187930|Vegfb|22340|vascular endothelial growth factor B	AK184156|Vegfb|22340|vascular endothelial growth factor B	AK184635|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr17_+_34784077_34784176	1.52138	NKX3-2.p2	BC013534|Atf6b|12915|activating transcription factor 6 beta	AK146671|Atf6b|12915|activating transcription factor 6 beta	NM_017406|Atf6b|12915|activating transcription factor 6 beta	AK090378|Atf6b|12915|activating transcription factor 6 beta	BC052635|Atf6b|12915|activating transcription factor 6 beta	AK159169|Atf6b|12915|activating transcription factor 6 beta	AK170027|Atf6b|12915|activating transcription factor 6 beta	AK143765|Atf6b|12915|activating transcription factor 6 beta
mm9_v1_chr7_-_112717810_112717827	1.51392	NKX3-2.p2	AK075730|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1
mm9_v1_chr7_-_126138646_126138673	1.51334	NKX3-2.p2	AF378831|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	BC020004|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr13_-_38620109_38620303	1.51118	NKX3-2.p2	AK225012|Txndc5|105245|thioredoxin domain containing 5	AK225013|Txndc5|105245|thioredoxin domain containing 5	AK225015|Txndc5|105245|thioredoxin domain containing 5	AK225022|Txndc5|105245|thioredoxin domain containing 5	AK225016|Txndc5|105245|thioredoxin domain containing 5	BC024505|Txndc5|105245|thioredoxin domain containing 5	AY548112|Txndc5|105245|thioredoxin domain containing 5	BC046789|Txndc5|105245|thioredoxin domain containing 5	AK225020|Txndc5|105245|thioredoxin domain containing 5	AK225021|Txndc5|105245|thioredoxin domain containing 5	AK224933|Txndc5|105245|thioredoxin domain containing 5	AK224949|Txndc5|105245|thioredoxin domain containing 5	AK224950|Txndc5|105245|thioredoxin domain containing 5	AK224970|Txndc5|105245|thioredoxin domain containing 5	AK224973|Txndc5|105245|thioredoxin domain containing 5	AK224987|Txndc5|105245|thioredoxin domain containing 5	AK224974|Txndc5|105245|thioredoxin domain containing 5	AK224922|Txndc5|105245|thioredoxin domain containing 5	AK224926|Txndc5|105245|thioredoxin domain containing 5	AK224984|Txndc5|105245|thioredoxin domain containing 5	AK224930|Txndc5|105245|thioredoxin domain containing 5	AK224943|Txndc5|105245|thioredoxin domain containing 5	AK224948|Txndc5|105245|thioredoxin domain containing 5	AK224997|Txndc5|105245|thioredoxin domain containing 5	AK224998|Txndc5|105245|thioredoxin domain containing 5	AK224985|Txndc5|105245|thioredoxin domain containing 5	AK224995|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr16_+_62854129_62854197	1.50871	NKX3-2.p2	AK163032|Pros1|19128|protein S (alpha)	AK145501|Pros1|19128|protein S (alpha)	NM_011173|Pros1|19128|protein S (alpha)	Z25469|Pros1|19128|protein S (alpha)	BC128316|Pros1|19128|protein S (alpha)
mm9_v1_chr5_-_148537561_148537595	1.49788	NKX3-2.p2	X78568|Flt1|14254|FMS-like tyrosine kinase 1	D88689|Flt1|14254|FMS-like tyrosine kinase 1	D88690|Flt1|14254|FMS-like tyrosine kinase 1	NM_010228|Flt1|14254|FMS-like tyrosine kinase 1	AK005502|Flt1|14254|FMS-like tyrosine kinase 1	AK013236|Flt1|14254|FMS-like tyrosine kinase 1	AK167596|Flt1|14254|FMS-like tyrosine kinase 1	AK146906|Flt1|14254|FMS-like tyrosine kinase 1
mm9_v1_chr7_-_88851823_88851828	1.49274	NKX3-2.p2	AB017136|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr1_-_95375363_95375369	1.48967	NKX3-2.p2	BC023806|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr15_-_90509751_90509818	1.48742	NKX3-2.p2	AK005311|Cpne8|66871|copine VIII	BC076564|Cpne8|66871|copine VIII	BC017626|Cpne8|66871|copine VIII	AK013407|Cpne8|66871|copine VIII	AK004559|Cpne8|66871|copine VIII	BC138745|Cpne8|66871|copine VIII	BC138746|Cpne8|66871|copine VIII	AK010227|Cpne8|66871|copine VIII	BC048551|Cpne8|66871|copine VIII	NM_001033851|Cpne8|66871|copine VIII	NM_025815|Cpne8|66871|copine VIII
mm9_v1_chr6_+_54631644_54631765	1.48435	NKX3-2.p2	BC042507|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	BC052467|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019120|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019128|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK043452|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	NM_026629|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene
mm9_v1_chr9_-_53822931_53822996	1.48141	NKX3-2.p2	BC049160|Elmod1|270162|ELMO domain containing 1	AK029207|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr5_-_122906470_122906515	1.48076	NKX3-2.p2	AK081191|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr9_+_70526702_70526924	1.47681	NKX3-2.p2	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr16_+_37868511_37868587	1.47372	NKX3-2.p2	AK147818|Lrrc58|320184|leucine rich repeat containing 58	BC141007|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr3_-_115832605_115832605	1.46438	NKX3-2.p2	BC029823|Vcam1|22329|vascular cell adhesion molecule 1	NM_011693|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr5_-_144288868_144288935	1.4634	NKX3-2.p2	AK088825|Rac1|19353|RAS-related C3 botulinum substrate 1	AK076023|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr2_-_34678700_34678700	1.45915	NKX3-2.p2	AF140683|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164768|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr2_-_130468507_130468540	1.45581	NKX3-2.p2	AK161711|Prosapip1|241638|ProSAPiP1 protein	AK148251|Prosapip1|241638|ProSAPiP1 protein	NM_197945|Prosapip1|241638|ProSAPiP1 protein
mm9_v1_chr16_-_97832775_97832801	1.45046	NKX3-2.p2	AK141350|Tmprss2|50528|transmembrane protease, serine 2	AK161173|Tmprss2|50528|transmembrane protease, serine 2	BC054348|Tmprss2|50528|transmembrane protease, serine 2	NM_015775|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr2_+_145686377_145686454	1.44581	NKX3-2.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr4_+_109079752_109079781	1.44565	NKX3-2.p2	BC026660|Ttc39a|230603|tetratricopeptide repeat domain 39A	AK172951|Ttc39a|230603|tetratricopeptide repeat domain 39A
mm9_v1_chr7_-_17509228_17509415	1.44563	NKX3-2.p2	AK169630|Calm3|12315|calmodulin 3	BC050926|Calm3|12315|calmodulin 3	M19380|Calm3|12315|calmodulin 3	AK165568|Calm3|12315|calmodulin 3	AK153179|Calm3|12315|calmodulin 3	AK152754|Calm3|12315|calmodulin 3	AK151610|Calm3|12315|calmodulin 3	NM_007590|Calm3|12315|calmodulin 3
mm9_v1_chrX_+_136145321_136145344	1.44522	NKX3-2.p2	AF426411|Rnf128|66889|ring finger protein 128
mm9_v1_chr7_-_112548498_112548560	1.44503	NKX3-2.p2	BC018464|Fam160a2|74349|family with sequence similarity 160, member A2	AK154173|Fam160a2|74349|family with sequence similarity 160, member A2	AK155273|Fam160a2|74349|family with sequence similarity 160, member A2	AK085350|Fam160a2|74349|family with sequence similarity 160, member A2	AK159716|Fam160a2|74349|family with sequence similarity 160, member A2	BC063093|Fam160a2|74349|family with sequence similarity 160, member A2	NM_199009|Fam160a2|74349|family with sequence similarity 160, member A2	AK169996|Fam160a2|74349|family with sequence similarity 160, member A2
mm9_v1_chr2_-_118529608_118529698	1.44485	NKX3-2.p2	NM_001081971|Gm1337|383787|predicted gene 1337
mm9_v1_chr15_-_37722161_37722182	1.44411	NKX3-2.p2	AK048440|Ncald|52589|neurocalcin delta	NM_134094|Ncald|52589|neurocalcin delta
mm9_v1_chr11_+_109512220_109512328	1.44124	NKX3-2.p2	AK005039|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK051068|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK053918|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK145797|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	NM_021880|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK147188|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK083383|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK027916|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK145860|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	BC003461|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr11_+_114529837_114529938	1.43672	NKX3-2.p2	AB037665|Rpl38|67671|ribosomal protein L38	NM_001048057|Rpl38|67671|ribosomal protein L38	NM_023372|Rpl38|67671|ribosomal protein L38	AK002659|Rpl38|67671|ribosomal protein L38	AK010518|Rpl38|67671|ribosomal protein L38	AK012391|Rpl38|67671|ribosomal protein L38	BC055346|Rpl38|67671|ribosomal protein L38	BC034339|Rpl38|67671|ribosomal protein L38	AK010277|Rpl38|67671|ribosomal protein L38	AK151517|Rpl38|67671|ribosomal protein L38	BC047046|Rpl38|67671|ribosomal protein L38
mm9_v1_chr1_-_51972718_51972769	1.4367	NKX3-2.p2	X69987|Myo1b|17912|myosin IB	AK138265|Myo1b|17912|myosin IB	BC026826|Myo1b|17912|myosin IB	AK053754|Myo1b|17912|myosin IB	AK149409|Myo1b|17912|myosin IB	BC046300|Myo1b|17912|myosin IB
mm9_v1_chr5_+_64203750_64203816	1.43641	NKX3-2.p2	AK159779|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	BC004797|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr6_+_125142154_125142245	1.43606	NKX3-2.p2	AK007615|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012524|Mrpl51|66493|mitochondrial ribosomal protein L51	AK076130|Mrpl51|66493|mitochondrial ribosomal protein L51	BC094621|Mrpl51|66493|mitochondrial ribosomal protein L51	AK007256|Mrpl51|66493|mitochondrial ribosomal protein L51	AK010268|Mrpl51|66493|mitochondrial ribosomal protein L51	NM_025595|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012126|Mrpl51|66493|mitochondrial ribosomal protein L51	BC021535|Mrpl51|66493|mitochondrial ribosomal protein L51	AK011966|Mrpl51|66493|mitochondrial ribosomal protein L51	BC100602|Mrpl51|66493|mitochondrial ribosomal protein L51	AB049960|Mrpl51|66493|mitochondrial ribosomal protein L51
mm9_v1_chr5_-_150438704_150438747	1.43522	NKX3-2.p2	D67016|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK083179|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr13_-_64468380_64468393	1.42255	NKX3-2.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr3_-_122322556_122322614	1.42226	NKX3-2.p2	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr11_+_51577152_51577250	1.41979	NKX3-2.p2	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chr6_+_56828743_56828972	1.41795	NKX3-2.p2	AK189293|Fkbp9|27055|FK506 binding protein 9	AK210890|Fkbp9|27055|FK506 binding protein 9	AK218606|Fkbp9|27055|FK506 binding protein 9	AK219634|Fkbp9|27055|FK506 binding protein 9	AK213828|Fkbp9|27055|FK506 binding protein 9	AK214698|Fkbp9|27055|FK506 binding protein 9	AK187406|Fkbp9|27055|FK506 binding protein 9
mm9_v1_chr10_+_127774778_127774839	1.4171	NKX3-2.p2	AK149990|Cs|12974|citrate synthase	AK010298|Cs|12974|citrate synthase
mm9_v1_chr11_-_98636689_98636697	1.41395	NKX3-2.p2	AK154931|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK155597|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr7_+_133839443_133839523	1.41152	NKX3-2.p2	BC061197|Bola2|66162|bolA-like 2 (E. coli)	BC045523|Bola2|66162|bolA-like 2 (E. coli)	AK028165|Bola2|66162|bolA-like 2 (E. coli)	AK002662|Bola2|66162|bolA-like 2 (E. coli)	AK003922|Bola2|66162|bolA-like 2 (E. coli)	NM_175103|Bola2|66162|bolA-like 2 (E. coli)	AK140279|Bola2|66162|bolA-like 2 (E. coli)
mm9_v1_chr8_+_97296093_97296104	1.41015	NKX3-2.p2	AB030188|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK078285|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138214|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138472|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138574|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK154646|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr1_-_71686889_71687012	1.40874	NKX3-2.p2	AK147249|Fn1|14268|fibronectin 1
mm9_v1_chr13_-_60278723_60278734	1.40847	NKX3-2.p2	X65128|Gas1|14451|growth arrest specific 1
mm9_v1_chr15_+_102156546_102156618	1.40721	NKX3-2.p2	NM_027044|Pfdn5|56612|prefoldin 5	AF108357|Pfdn5|56612|prefoldin 5	AK004438|Pfdn5|56612|prefoldin 5	AK145883|Pfdn5|56612|prefoldin 5	AK005682|Pfdn5|56612|prefoldin 5	BC026920|Pfdn5|56612|prefoldin 5	AK028206|Pfdn5|56612|prefoldin 5
mm9_v1_chr11_+_70470701_70470714	1.40247	NKX3-2.p2	X70182|Eno3|13808|enolase 3, beta muscle	AK002485|Eno3|13808|enolase 3, beta muscle	NM_001136062|Eno3|13808|enolase 3, beta muscle	X57747|Eno3|13808|enolase 3, beta muscle
mm9_v1_chr4_+_137280366_137280389	1.39612	NKX3-2.p2	AK005063|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr13_-_23677831_23677860	1.39588	NKX3-2.p2	BC069889|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr7_-_29526759_29526858	1.39163	NKX3-2.p2	Y11682|Mrps12|24030|mitochondrial ribosomal protein S12	NM_011885|Mrps12|24030|mitochondrial ribosomal protein S12	BC027522|Mrps12|24030|mitochondrial ribosomal protein S12	AK146730|Mrps12|24030|mitochondrial ribosomal protein S12
mm9_v1_chr13_-_38620304_38620305	1.3908	NKX3-2.p2	AK224957|Txndc5|105245|thioredoxin domain containing 5	AK224958|Txndc5|105245|thioredoxin domain containing 5	AK224962|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr14_-_30534966_30535111	1.39079	NKX3-2.p2	AJ010949|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3	NM_009785|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm9_v1_chr3_-_27316628_27316630	1.38692	NKX3-2.p2	AK039335|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr6_+_86145477_86145494	1.38529	NKX3-2.p2	AK162680|Tgfa|21802|transforming growth factor alpha	M92420|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr17_-_26335980_26336160	1.38357	NKX3-2.p2	AK007743|Pdia2|69191|protein disulfide isomerase associated 2	BC116671|Pdia2|69191|protein disulfide isomerase associated 2	NM_001081070|Pdia2|69191|protein disulfide isomerase associated 2
mm9_v1_chr11_-_72303447_72303476	1.38333	NKX3-2.p2	AK156007|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr6_+_34426288_34426319	1.37927	NKX3-2.p2	AK006315|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK043412|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr3_+_63099793_63099793	1.37582	NKX3-2.p2	AK031446|Mme|17380|membrane metallo endopeptidase	NM_008604|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr9_-_63605745_63605800	1.36899	NKX3-2.p2	AK048626|Smad3|17127|MAD homolog 3 (Drosophila)	NM_016769|Smad3|17127|MAD homolog 3 (Drosophila)
mm9_v1_chr7_+_150659707_150659725	1.36855	NKX3-2.p2	BC003734|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18
mm9_v1_chr5_-_109027924_109027935	1.36308	NKX3-2.p2	AK034637|Gak|231580|cyclin G associated kinase
mm9_v1_chr6_+_71493841_71493983	1.36242	NKX3-2.p2	AK083562|Vps24|66700|vacuolar protein sorting 24 (yeast)	NM_025783|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK018611|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK014818|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK016677|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC049964|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK009414|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC027441|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC039759|Vps24|66700|vacuolar protein sorting 24 (yeast)
mm9_v1_chr11_+_60644132_60644227	1.36105	NKX3-2.p2	NM_001172112|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B	NM_145428|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B	AK052209|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B	AK139084|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B	BC003479|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B	AK144057|Dhrs7b|216820|dehydrogenase/reductase (SDR family) member 7B
mm9_v1_chr6_+_113328105_113328186	1.35718	NKX3-2.p2	NM_001170485|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_001170486|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_026552|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK017993|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK030840|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK039215|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK076248|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK133626|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK159410|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK136082|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK018069|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK150690|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK153380|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AJ278129|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK077325|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK166440|Arpc4|68089|actin related protein 2/3 complex, subunit 4
mm9_v1_chr8_+_74092790_74092825	1.35694	NKX3-2.p2	BC028937|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	NM_011977|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr2_+_32218707_32218872	1.35205	NKX3-2.p2	AK089986|Ciz1|68379|CDKN1A interacting zinc finger protein 1	AK159103|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC018483|Ciz1|68379|CDKN1A interacting zinc finger protein 1	NM_028412|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC072624|Ciz1|68379|CDKN1A interacting zinc finger protein 1
mm9_v1_chr6_+_34426324_34426351	1.34348	NKX3-2.p2	BC004589|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr4_-_141381906_141381921	1.3402	NKX3-2.p2	BC026552|Cela2a|13706|chymotrypsin-like elastase family, member 2A	NM_007919|Cela2a|13706|chymotrypsin-like elastase family, member 2A	X04573|Cela2a|13706|chymotrypsin-like elastase family, member 2A
mm9_v1_chr14_-_73762840_73762848	1.33967	NKX3-2.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr4_-_61443185_61443257	1.33916	NKX3-2.p2	EU882232|Mup19|100189605|major urinary protein 19	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	AK013259|Mup19|100189605|major urinary protein 19	NM_001135127|Mup19|100189605|major urinary protein 19
mm9_v1_chr10_+_34203204_34203369	1.33914	NKX3-2.p2	BC007137|Frk|14302|fyn-related kinase	AK166379|Frk|14302|fyn-related kinase	NM_001159544|Frk|14302|fyn-related kinase	NM_010237|Frk|14302|fyn-related kinase	AK028855|Frk|14302|fyn-related kinase	L36132|Frk|14302|fyn-related kinase	AK052614|Frk|14302|fyn-related kinase	AK077264|Frk|14302|fyn-related kinase	Z48757|Frk|14302|fyn-related kinase	AK085191|Frk|14302|fyn-related kinase
mm9_v1_chr8_+_26629214_26629332	1.33569	NKX3-2.p2	NM_001079908|Fgfr1|14182|fibroblast growth factor receptor 1	NM_001079909|Fgfr1|14182|fibroblast growth factor receptor 1	NM_010206|Fgfr1|14182|fibroblast growth factor receptor 1	AK049704|Fgfr1|14182|fibroblast growth factor receptor 1	S74765|Fgfr1|14182|fibroblast growth factor receptor 1	BC010200|Fgfr1|14182|fibroblast growth factor receptor 1
mm9_v1_chr4_+_138748812_138748922	1.33389	NKX3-2.p2	AK159390|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK160082|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK156778|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	NM_009798|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	BC002053|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK153367|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK153394|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK168738|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	NM_001037761|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	U10406|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	U10407|Capzb|12345|capping protein (actin filament) muscle Z-line, beta
mm9_v1_chr12_+_4082739_4082786	1.33358	NKX3-2.p2	AY035893|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr10_+_127774872_127774973	1.33353	NKX3-2.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr1_-_95375372_95375387	1.33265	NKX3-2.p2	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr14_-_102039655_102039692	1.33155	NKX3-2.p2	AK004316|Commd6|66200|COMM domain containing 6	AK034223|Commd6|66200|COMM domain containing 6	AK020234|Commd6|66200|COMM domain containing 6	AK018711|Commd6|66200|COMM domain containing 6	AK019351|Commd6|66200|COMM domain containing 6	AK019432|Commd6|66200|COMM domain containing 6	AK008220|Commd6|66200|COMM domain containing 6	AK011226|Commd6|66200|COMM domain containing 6	BC132261|Commd6|66200|COMM domain containing 6	BC132265|Commd6|66200|COMM domain containing 6	BC145360|Commd6|66200|COMM domain containing 6	BC145361|Commd6|66200|COMM domain containing 6	AK009796|Commd6|66200|COMM domain containing 6	NM_001033132|Commd6|66200|COMM domain containing 6	NM_001168592|Commd6|66200|COMM domain containing 6
mm9_v1_chr16_+_94914273_94914275	1.32328	NKX3-2.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr4_+_137220675_137220705	1.32247	NKX3-2.p2	AK172955|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chrX_-_45388010_45388030	1.3209	NKX3-2.p2	BC020015|Apln|30878|apelin	DQ832282|Apln|30878|apelin	NM_013912|Apln|30878|apelin	AK042076|Apln|30878|apelin
mm9_v1_chrX_-_136406046_136406192	1.31952	NKX3-2.p2	BC132153|Morc4|75746|microrchidia 4	BC132497|Morc4|75746|microrchidia 4	BC098483|Morc4|75746|microrchidia 4	AK017472|Morc4|75746|microrchidia 4	AK048519|Morc4|75746|microrchidia 4	AK164017|Morc4|75746|microrchidia 4	AK053895|Morc4|75746|microrchidia 4	AK032807|Morc4|75746|microrchidia 4	NM_001193309|Morc4|75746|microrchidia 4	NM_029413|Morc4|75746|microrchidia 4
mm9_v1_chr3_-_88285172_88285231	1.31913	NKX3-2.p2	
mm9_v1_chr5_-_150438750_150438824	1.31906	NKX3-2.p2	BC018378|Hsph1|15505|heat shock 105kDa/110kDa protein 1	D67017|Hsph1|15505|heat shock 105kDa/110kDa protein 1	L40406|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK146697|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr5_-_123064483_123064536	1.31857	NKX3-2.p2	BC055721|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK161375|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK013424|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AF354757|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	NM_009879|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	Y10495|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)
mm9_v1_chr14_+_120830603_120830641	1.30226	NKX3-2.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr5_-_38952934_38952968	1.29902	NKX3-2.p2	AK004644|Wdr1|22388|WD repeat domain 1
mm9_v1_chr2_+_157104738_157104878	1.2978	NKX3-2.p2	AK018761|Rpn2|20014|ribophorin II	BC046806|Rpn2|20014|ribophorin II	AK004968|Rpn2|20014|ribophorin II	NM_019642|Rpn2|20014|ribophorin II
mm9_v1_chr2_+_169458802_169458807	1.29375	NKX3-2.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr12_-_46175433_46175475	1.29246	NKX3-2.p2	NM_144552|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr11_-_116060026_116060114	1.29067	NKX3-2.p2	BC054727|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK051539|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AB034914|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK040566|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK128941|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AF006688|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr5_-_115608087_115608107	1.29056	NKX3-2.p2	AK129066|Mlec|109154|malectin
mm9_v1_chr16_+_7069971_7070091	1.29041	NKX3-2.p2	AY659956|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659957|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659958|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr3_+_79689851_79689888	1.29032	NKX3-2.p2	NM_133187|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr10_-_105011439_105011534	1.29011	NKX3-2.p2	BC092226|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK052344|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK135552|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	NM_177368|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr2_+_30219752_30219824	1.28691	NKX3-2.p2	AK165996|Fam73b|108958|family with sequence similarity 73, member B	AK154200|Fam73b|108958|family with sequence similarity 73, member B	AK140122|Fam73b|108958|family with sequence similarity 73, member B	AK040713|Fam73b|108958|family with sequence similarity 73, member B	AK077618|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr9_-_123760686_123760944	1.28595	NKX3-2.p2	AJ428065|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_148925|Fyco1|17281|FYVE and coiled-coil domain containing 1	BC053712|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chrX_+_137909951_137910122	1.28255	NKX3-2.p2	AK133179|Col4a5|12830|collagen, type IV, alpha 5	NM_001163155|Col4a5|12830|collagen, type IV, alpha 5	NM_007736|Col4a5|12830|collagen, type IV, alpha 5	AB041350|Col4a5|12830|collagen, type IV, alpha 5	BC082788|Col4a5|12830|collagen, type IV, alpha 5
mm9_v1_chr19_-_7369859_7369936	1.28079	NKX3-2.p2	AK172664|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080390|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK154864|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr4_+_155366962_155366980	1.27731	NKX3-2.p2	BC005715|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr12_+_38607133_38607152	1.2736	NKX3-2.p2	AK032509|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr3_+_94736974_94736989	1.27244	NKX3-2.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr2_-_25463924_25464009	1.26897	NKX3-2.p2	BC085507|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	NM_001024616|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC021476|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC020111|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081440|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK171643|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC058585|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC023692|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC051138|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK045520|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081397|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK157020|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK077311|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK143678|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene
mm9_v1_chr3_-_116510948_116511083	1.26806	NKX3-2.p2	AK087855|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK041661|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK036225|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	NM_001081326|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm9_v1_chr3_-_80606641_80606686	1.26788	NKX3-2.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr11_+_68912444_68912492	1.26726	NKX3-2.p2	NM_011065|Per1|18626|period homolog 1 (Drosophila)	BC091645|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr10_-_116719364_116719380	1.26596	NKX3-2.p2	AK159276|Lyz2|17105|lysozyme 2
mm9_v1_chr1_+_75503651_75503799	1.26318	NKX3-2.p2	BC056627|Inha|16322|inhibin alpha	NM_010564|Inha|16322|inhibin alpha	X69618|Inha|16322|inhibin alpha
mm9_v1_chr2_-_32702729_32702816	1.25981	NKX3-2.p2	NM_009295|Stxbp1|20910|syntaxin binding protein 1	NM_001113569|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr11_-_98636538_98636646	1.25863	NKX3-2.p2	AK041047|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK135640|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	X86010|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137582|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	NM_145434|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137398|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK146430|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr2_+_32218529_32218697	1.25598	NKX3-2.p2	AK165687|Ciz1|68379|CDKN1A interacting zinc finger protein 1	AK137961|Ciz1|68379|CDKN1A interacting zinc finger protein 1
mm9_v1_chr7_-_51920870_51920872	1.25171	NKX3-2.p2	AY205605|Myh14|71960|myosin, heavy polypeptide 14	EF602040|Myh14|71960|myosin, heavy polypeptide 14	NM_028021|Myh14|71960|myosin, heavy polypeptide 14
mm9_v1_chr6_+_122463663_122463700	1.25124	NKX3-2.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr7_-_112781902_112782053	1.25085	NKX3-2.p2	BC003347|Trim3|55992|tripartite motif-containing 3	AF220019|Trim3|55992|tripartite motif-containing 3	AK144674|Trim3|55992|tripartite motif-containing 3	NM_018880|Trim3|55992|tripartite motif-containing 3	AK170029|Trim3|55992|tripartite motif-containing 3	BC034263|Trim3|55992|tripartite motif-containing 3	AK019165|Trim3|55992|tripartite motif-containing 3
mm9_v1_chr11_-_72303293_72303434	1.24973	NKX3-2.p2	AB441166|Spns2|216892|spinster homolog 2 (Drosophila)	NM_153060|Spns2|216892|spinster homolog 2 (Drosophila)	BC011467|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr8_+_77737842_77737842	1.24853	NKX3-2.p2	BC036988|Rasd2|75141|RASD family, member 2	NM_029182|Rasd2|75141|RASD family, member 2
mm9_v1_chr13_+_34967499_34967514	1.24768	NKX3-2.p2	AB516304|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm9_v1_chr1_-_74331210_74331311	1.24624	NKX3-2.p2	AK151820|Aamp|227290|angio-associated migratory protein	AK167621|Aamp|227290|angio-associated migratory protein	AK162750|Aamp|227290|angio-associated migratory protein	AK146470|Aamp|227290|angio-associated migratory protein	NM_001190444|Aamp|227290|angio-associated migratory protein	NM_146110|Aamp|227290|angio-associated migratory protein
mm9_v1_chr5_-_23950969_23951097	1.2459	NKX3-2.p2	BC013547|Fastk|66587|Fas-activated serine/threonine kinase	AK052667|Fastk|66587|Fas-activated serine/threonine kinase	AK002552|Fastk|66587|Fas-activated serine/threonine kinase	AK038596|Fastk|66587|Fas-activated serine/threonine kinase	AK151859|Fastk|66587|Fas-activated serine/threonine kinase	AK159751|Fastk|66587|Fas-activated serine/threonine kinase	AK166508|Fastk|66587|Fas-activated serine/threonine kinase	AK167346|Fastk|66587|Fas-activated serine/threonine kinase	AK139374|Fastk|66587|Fas-activated serine/threonine kinase	AK164317|Fastk|66587|Fas-activated serine/threonine kinase	AK152369|Fastk|66587|Fas-activated serine/threonine kinase	NM_023229|Fastk|66587|Fas-activated serine/threonine kinase
mm9_v1_chr2_+_35122282_35122330	1.24544	NKX3-2.p2	AK166831|Gsn|227753|gelsolin
mm9_v1_chr5_-_144288771_144288810	1.24382	NKX3-2.p2	X57277|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr7_-_123477620_123477703	1.24356	NKX3-2.p2	BC085269|Rps13|68052|ribosomal protein S13	BC090397|Rps13|68052|ribosomal protein S13	BC106137|Rps13|68052|ribosomal protein S13	AK018703|Rps13|68052|ribosomal protein S13	AK076060|Rps13|68052|ribosomal protein S13	BC011192|Rps13|68052|ribosomal protein S13	AK012479|Rps13|68052|ribosomal protein S13	AK151043|Rps13|68052|ribosomal protein S13	AK166691|Rps13|68052|ribosomal protein S13	BC125602|Rps13|68052|ribosomal protein S13	BC125604|Rps13|68052|ribosomal protein S13	AK151671|Rps13|68052|ribosomal protein S13	AK161798|Rps13|68052|ribosomal protein S13	AK088237|Rps13|68052|ribosomal protein S13	NM_026533|Rps13|68052|ribosomal protein S13
mm9_v1_chr14_-_21613162_21613325	1.2411	NKX3-2.p2	AF395884|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK154764|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC025597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK078311|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC019162|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK081969|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK031213|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK054406|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039138|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039139|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_178597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma
mm9_v1_chr10_+_40657980_40658124	1.23656	NKX3-2.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chrX_-_96665980_96666083	1.23607	NKX3-2.p2	AK005373|Pja1|18744|praja1, RING-H2 motif containing	BC037616|Pja1|18744|praja1, RING-H2 motif containing	AK181060|Pja1|18744|praja1, RING-H2 motif containing	AK181628|Pja1|18744|praja1, RING-H2 motif containing	AK188149|Pja1|18744|praja1, RING-H2 motif containing	BC025975|Pja1|18744|praja1, RING-H2 motif containing	AK145943|Pja1|18744|praja1, RING-H2 motif containing	AF335250|Pja1|18744|praja1, RING-H2 motif containing	AF335251|Pja1|18744|praja1, RING-H2 motif containing	AF335252|Pja1|18744|praja1, RING-H2 motif containing	AK135382|Pja1|18744|praja1, RING-H2 motif containing	NM_001083110|Pja1|18744|praja1, RING-H2 motif containing	NM_008853|Pja1|18744|praja1, RING-H2 motif containing
mm9_v1_chr4_-_49562319_49562386	1.23359	NKX3-2.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr11_+_75275123_75275158	1.22948	NKX3-2.p2	AK018628|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene	AK008813|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene
mm9_v1_chr5_-_118605455_118605474	1.22934	NKX3-2.p2	AK031815|Fbxw8|231672|F-box and WD-40 domain protein 8	AK053794|Fbxw8|231672|F-box and WD-40 domain protein 8	NM_172721|Fbxw8|231672|F-box and WD-40 domain protein 8	AK134291|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr10_-_75395207_75395224	1.22525	NKX3-2.p2	NM_008606|Mmp11|17385|matrix metallopeptidase 11	Z12604|Mmp11|17385|matrix metallopeptidase 11	BC052854|Mmp11|17385|matrix metallopeptidase 11	AK142169|Mmp11|17385|matrix metallopeptidase 11	AK165778|Mmp11|17385|matrix metallopeptidase 11
mm9_v1_chr17_+_35958628_35958663	1.22309	NKX3-2.p2	AK051003|Ier3|15937|immediate early response 3	AK170477|Ier3|15937|immediate early response 3	AK003466|Ier3|15937|immediate early response 3	BC006950|Ier3|15937|immediate early response 3	NM_133662|Ier3|15937|immediate early response 3	CT010247|Ier3|15937|immediate early response 3	CT010271|Ier3|15937|immediate early response 3
mm9_v1_chr9_-_26613989_26614018	1.22215	NKX3-2.p2	AK143057|Glb1l2|244757|galactosidase, beta 1-like 2	BC038479|Glb1l2|244757|galactosidase, beta 1-like 2	NM_153803|Glb1l2|244757|galactosidase, beta 1-like 2	AK033400|Glb1l2|244757|galactosidase, beta 1-like 2
mm9_v1_chr15_+_89330287_89330287	1.21843	NKX3-2.p2	AB231013|Shank3|58234|SH3/ankyrin domain gene 3	NM_021423|Shank3|58234|SH3/ankyrin domain gene 3
mm9_v1_chr13_+_13876570_13876649	1.21507	NKX3-2.p2	AK148452|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr7_+_148748102_148748107	1.21489	NKX3-2.p2	X14972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr4_-_125933482_125933589	1.21375	NKX3-2.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chr11_-_6100014_6100127	1.21266	NKX3-2.p2	BC052089|Nudcd3|209586|NudC domain containing 3	AK215033|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr14_+_21526757_21526874	1.21109	NKX3-2.p2	AK147398|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	NM_027996|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	AK053265|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151046|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151056|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151173|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC172103|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr19_-_5106937_5107039	1.20884	NKX3-2.p2	AB232584|Rab1b|76308|RAB1B, member RAS oncogene family	BC016408|Rab1b|76308|RAB1B, member RAS oncogene family	AK003609|Rab1b|76308|RAB1B, member RAS oncogene family	NM_029576|Rab1b|76308|RAB1B, member RAS oncogene family	AK042020|Rab1b|76308|RAB1B, member RAS oncogene family	AK156726|Rab1b|76308|RAB1B, member RAS oncogene family
mm9_v1_chr8_+_28233019_28233024	1.20789	NKX3-2.p2	AK020642|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr7_-_126602780_126602785	1.2078	NKX3-2.p2	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chr11_-_98448496_98448592	1.20637	NKX3-2.p2	BC046594|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK087497|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK012718|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK154085|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK009621|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	NM_025661|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)
mm9_v1_chrX_+_102318792_102318798	1.20537	NKX3-2.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr9_-_123760992_123761028	1.19984	NKX3-2.p2	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr6_-_87995185_87995259	1.19864	NKX3-2.p2	AK057671|Rab7|19349|RAB7, member RAS oncogene family	AK159507|Rab7|19349|RAB7, member RAS oncogene family	X89650|Rab7|19349|RAB7, member RAS oncogene family	AK005004|Rab7|19349|RAB7, member RAS oncogene family	AK151078|Rab7|19349|RAB7, member RAS oncogene family	AK152666|Rab7|19349|RAB7, member RAS oncogene family	AK154234|Rab7|19349|RAB7, member RAS oncogene family	AK148117|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chr12_+_77182878_77182935	1.19863	NKX3-2.p2	FJ848978|Syne2|319565|synaptic nuclear envelope 2
mm9_v1_chr19_+_45089665_45089708	1.19799	NKX3-2.p2	NM_145503|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK169936|Lzts2|226154|leucine zipper, putative tumor suppressor 2	BC092263|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK144154|Lzts2|226154|leucine zipper, putative tumor suppressor 2	NM_001130525|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr8_+_106864488_106864703	1.19371	NKX3-2.p2	AY241870|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	NM_024217|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	AK079165|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	BC003230|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	AK172091|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	BC145817|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	BC145819|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3	AK003882|Cmtm3|68119|CKLF-like MARVEL transmembrane domain containing 3
mm9_v1_chr2_-_103143314_103143332	1.18848	NKX3-2.p2	BC005520|Ehf|13661|ets homologous factor	AK028651|Ehf|13661|ets homologous factor	BC006789|Ehf|13661|ets homologous factor
mm9_v1_chr7_-_117129643_117129675	1.1883	NKX3-2.p2	AK167021|Tmem41b|233724|transmembrane protein 41B	AK166845|Tmem41b|233724|transmembrane protein 41B
mm9_v1_chr1_+_127457691_127457733	1.18609	NKX3-2.p2	AK169012|Slc35f5|74150|solute carrier family 35, member F5	BC026858|Slc35f5|74150|solute carrier family 35, member F5
mm9_v1_chr7_-_149762919_149762977	1.18589	NKX3-2.p2	BC025150|H19|14955|H19 fetal liver mRNA
mm9_v1_chr19_-_46119403_46119446	1.18174	NKX3-2.p2	AF030333|Ldb1|16825|LIM domain binding 1
mm9_v1_chr2_-_58419236_58419238	1.17692	NKX3-2.p2	AK150014|Acvr1|11477|activin A receptor, type 1	AK150075|Acvr1|11477|activin A receptor, type 1	NM_001110204|Acvr1|11477|activin A receptor, type 1	NM_001110205|Acvr1|11477|activin A receptor, type 1	NM_007394|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr6_+_42195977_42196020	1.17245	NKX3-2.p2	BC051507|Gstk1|76263|glutathione S-transferase kappa 1	BC038151|Gstk1|76263|glutathione S-transferase kappa 1	BC058163|Gstk1|76263|glutathione S-transferase kappa 1	AY279096|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr2_-_170232008_170232013	1.17082	NKX3-2.p2	AK008957|Bcas1|76960|breast carcinoma amplified sequence 1	AK031825|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr2_+_71819264_71819343	1.16974	NKX3-2.p2	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr3_-_101408495_101408631	1.16428	NKX3-2.p2	BC033435|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC033471|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC025811|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC021496|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC025627|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC042435|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC025618|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_144900|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	AK088000|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	AK137001|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	AK159279|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	AK159306|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC023794|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide	BC032187|Atp1a1|11928|ATPase, Na+/K+ transporting, alpha 1 polypeptide
mm9_v1_chr11_+_114530028_114530110	1.16274	NKX3-2.p2	BC094258|Rpl38|67671|ribosomal protein L38	BC094644|Rpl38|67671|ribosomal protein L38	NM_001048058|Rpl38|67671|ribosomal protein L38	BC081447|Rpl38|67671|ribosomal protein L38
mm9_v1_chr11_-_3427914_3427958	1.16094	NKX3-2.p2	AK009426|Smtn|29856|smoothelin
mm9_v1_chr11_-_21222127_21222131	1.16089	NKX3-2.p2	AK177417|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chrX_+_53599573_53599586	1.15937	NKX3-2.p2	AK142888|Zfp449|78619|zinc finger protein 449	AK036596|Zfp449|78619|zinc finger protein 449	NM_030139|Zfp449|78619|zinc finger protein 449	AK020600|Zfp449|78619|zinc finger protein 449
mm9_v1_chr11_+_94189303_94189504	1.15688	NKX3-2.p2	NM_027799|Ankrd40|71452|ankyrin repeat domain 40	NM_146024|Ankrd40|71452|ankyrin repeat domain 40	BC023133|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chrX_-_49518099_49518099	1.15506	NKX3-2.p2	BC006622|Gpc4|14735|glypican 4	NM_008150|Gpc4|14735|glypican 4
mm9_v1_chr11_-_120442448_120442571	1.15145	NKX3-2.p2	AK077343|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr2_-_66622823_66622970	1.15042	NKX3-2.p2	BC145273|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	NM_009135|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	AK142964|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr1_+_21230683_21230717	1.15011	NKX3-2.p2	AK014076|Gsta3|14859|glutathione S-transferase, alpha 3	AK149543|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr2_-_32279522_32279542	1.15006	NKX3-2.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr19_-_56464434_56464529	1.14984	NKX3-2.p2	BC145109|Nrap|18175|nebulin-related anchoring protein	AK138925|Nrap|18175|nebulin-related anchoring protein	AY177622|Nrap|18175|nebulin-related anchoring protein	AY177623|Nrap|18175|nebulin-related anchoring protein	NM_008733|Nrap|18175|nebulin-related anchoring protein	NM_198059|Nrap|18175|nebulin-related anchoring protein
mm9_v1_chr7_+_137836116_137836140	1.14846	NKX3-2.p2	AK165194|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr6_-_125444695_125444710	1.14821	NKX3-2.p2	L08115|Cd9|12527|CD9 antigen
mm9_v1_chr9_-_71619329_71619430	1.14579	NKX3-2.p2	AK040774|Cgnl1|68178|cingulin-like 1	AB186125|Cgnl1|68178|cingulin-like 1	AK081179|Cgnl1|68178|cingulin-like 1	AK036871|Cgnl1|68178|cingulin-like 1	NM_026599|Cgnl1|68178|cingulin-like 1
mm9_v1_chr17_+_57129686_57129814	1.14502	NKX3-2.p2	NM_017393|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK145765|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	BC001998|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AJ005253|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK004024|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK168053|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK002238|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK147719|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)
mm9_v1_chr19_-_21467250_21467261	1.14396	NKX3-2.p2	AK080065|Gda|14544|guanine deaminase
mm9_v1_chr11_-_98261715_98261736	1.14363	NKX3-2.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr15_-_77759356_77759437	1.14325	NKX3-2.p2	AK167925|Txn2|56551|thioredoxin 2	U85089|Txn2|56551|thioredoxin 2	AK167754|Txn2|56551|thioredoxin 2	AK168322|Txn2|56551|thioredoxin 2	AK002358|Txn2|56551|thioredoxin 2	AK147164|Txn2|56551|thioredoxin 2	AK090199|Txn2|56551|thioredoxin 2	AK149855|Txn2|56551|thioredoxin 2	BC068182|Txn2|56551|thioredoxin 2	AK010917|Txn2|56551|thioredoxin 2	NM_019913|Txn2|56551|thioredoxin 2	AK160591|Txn2|56551|thioredoxin 2
mm9_v1_chr4_+_84851440_84851480	1.14184	NKX3-2.p2	AF326561|Sh3gl2|20404|SH3-domain GRB2-like 2	AF326562|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr9_-_58160966_58161035	1.14102	NKX3-2.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr9_-_45792865_45792953	1.14012	NKX3-2.p2	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr2_-_30061335_30061366	1.13805	NKX3-2.p2	AK031511|Ccbl1|70266|cysteine conjugate-beta lyase 1	AK042391|Ccbl1|70266|cysteine conjugate-beta lyase 1
mm9_v1_chrX_+_133242520_133242603	1.13783	NKX3-2.p2	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr16_-_38713106_38713149	1.13712	NKX3-2.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr2_-_154202541_154202588	1.13373	NKX3-2.p2	
mm9_v1_chr9_+_54547190_54547334	1.13303	NKX3-2.p2	AB032401|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4
mm9_v1_chrX_-_163647088_163647149	1.1309	NKX3-2.p2	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr18_-_33623069_33623089	1.1304	NKX3-2.p2	BC054762|D0H4S114|27528|DNA segment, human D4S114	NM_001109990|D0H4S114|27528|DNA segment, human D4S114	X70398|D0H4S114|27528|DNA segment, human D4S114	AK048361|D0H4S114|27528|DNA segment, human D4S114	AK081502|D0H4S114|27528|DNA segment, human D4S114	AK133769|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr5_+_93696566_93696638	1.13031	NKX3-2.p2	NM_007635|Ccng2|12452|cyclin G2	AK170651|Ccng2|12452|cyclin G2	AF005885|Ccng2|12452|cyclin G2
mm9_v1_chrX_+_71542425_71542435	1.13019	NKX3-2.p2	NM_018794|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chr19_-_17912073_17912162	1.12907	NKX3-2.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr6_+_28430311_28430460	1.12317	NKX3-2.p2	AK133837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	NM_019776|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK167576|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK159837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK088028|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK161591|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AB021491|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK034914|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK162432|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	BC007126|Snd1|56463|staphylococcal nuclease and tudor domain containing 1
mm9_v1_chr9_-_115997747_115997772	1.12101	NKX3-2.p2	BC016262|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr17_+_8138892_8139016	1.11725	NKX3-2.p2	AK016364|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC150663|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr1_+_95132413_95132473	1.11623	NKX3-2.p2	AK086298|Sned1|208777|sushi, nidogen and EGF-like domains 1	AJ584850|Sned1|208777|sushi, nidogen and EGF-like domains 1	AY169783|Sned1|208777|sushi, nidogen and EGF-like domains 1	BC145886|Sned1|208777|sushi, nidogen and EGF-like domains 1	NM_172463|Sned1|208777|sushi, nidogen and EGF-like domains 1
mm9_v1_chr18_+_82723920_82724127	1.11592	NKX3-2.p2	AK005129|Mbp|17196|myelin basic protein	M15060|Mbp|17196|myelin basic protein	BC004704|Mbp|17196|myelin basic protein	DQ887821|Mbp|17196|myelin basic protein	M15062|Mbp|17196|myelin basic protein	AK189263|Mbp|17196|myelin basic protein	AK190490|Mbp|17196|myelin basic protein	AK191010|Mbp|17196|myelin basic protein	AK195158|Mbp|17196|myelin basic protein	AK197274|Mbp|17196|myelin basic protein	AK199946|Mbp|17196|myelin basic protein
mm9_v1_chr4_+_140517161_140517347	1.11479	NKX3-2.p2	BC051934|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	NM_023374|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	BC013509|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK003052|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK009660|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK169839|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK169252|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK003533|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK153045|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	BC018580|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
mm9_v1_chr14_+_66016119_66016146	1.11315	NKX3-2.p2	BC027382|Zfp395|380912|zinc finger protein 395
mm9_v1_chr10_+_79144868_79145048	1.11176	NKX3-2.p2	BC039160|Cdc34|216150|cell division cycle 34 homolog (S. cerevisiae)	NM_177613|Cdc34|216150|cell division cycle 34 homolog (S. cerevisiae)	BC094502|Cdc34|216150|cell division cycle 34 homolog (S. cerevisiae)
mm9_v1_chr13_+_22135065_22135098	1.10722	NKX3-2.p2	NM_178198|Hist1h2bj|319183|histone cluster 1, H2bj
mm9_v1_chr9_+_102910816_102910949	1.10699	NKX3-2.p2	AK087350|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK169706|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK166724|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	NM_033314|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	BC035200|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AF323958|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1
mm9_v1_chr11_-_68666619_68666656	1.10671	NKX3-2.p2	AF323918|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	NM_023668|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr8_-_108457731_108457761	1.1065	NKX3-2.p2	AK220246|Ctrl|109660|chymotrypsin-like	AK007333|Ctrl|109660|chymotrypsin-like	AK009019|Ctrl|109660|chymotrypsin-like	BC087918|Ctrl|109660|chymotrypsin-like	AB016228|Ctrl|109660|chymotrypsin-like	NM_023182|Ctrl|109660|chymotrypsin-like
mm9_v1_chr10_+_127764070_127764180	1.1063	NKX3-2.p2	
mm9_v1_chr5_+_93327023_93327086	1.10277	NKX3-2.p2	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr13_+_58910051_58910106	1.10171	NKX3-2.p2	AB377224|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AB377225|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AK009606|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	M33385|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr7_-_54389053_54389053	1.10064	NKX3-2.p2	NM_013643|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	U28217|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr12_+_105644917_105644968	1.09999	NKX3-2.p2	NM_009252|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	BC013651|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	M64086|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N
mm9_v1_chr12_+_33639071_33639140	1.09903	NKX3-2.p2	AK049545|Sypl|19027|synaptophysin-like protein	AK049556|Sypl|19027|synaptophysin-like protein	AK030703|Sypl|19027|synaptophysin-like protein	AK159382|Sypl|19027|synaptophysin-like protein	AK159929|Sypl|19027|synaptophysin-like protein	AK033303|Sypl|19027|synaptophysin-like protein	AK167617|Sypl|19027|synaptophysin-like protein	AK052556|Sypl|19027|synaptophysin-like protein	AK154051|Sypl|19027|synaptophysin-like protein
mm9_v1_chr2_+_179854008_179854109	1.09829	NKX3-2.p2	AK145292|Osbpl2|228983|oxysterol binding protein-like 2	AK170669|Osbpl2|228983|oxysterol binding protein-like 2	NM_144500|Osbpl2|228983|oxysterol binding protein-like 2	BC026804|Osbpl2|228983|oxysterol binding protein-like 2	AK170306|Osbpl2|228983|oxysterol binding protein-like 2	AK166059|Osbpl2|228983|oxysterol binding protein-like 2
mm9_v1_chr15_-_6824238_6824366	1.09737	NKX3-2.p2	AK040020|Osmr|18414|oncostatin M receptor	AK087179|Osmr|18414|oncostatin M receptor	AF058805|Osmr|18414|oncostatin M receptor	NM_011019|Osmr|18414|oncostatin M receptor
mm9_v1_chr14_+_21167427_21167478	1.09735	NKX3-2.p2	BC080849|Fam149b|105428|family with sequence similarity 149, member B	NM_001024512|Fam149b|105428|family with sequence similarity 149, member B	AK129252|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr10_-_57252251_57252251	1.09308	NKX3-2.p2	AK135359|Serinc1|56442|serine incorporator 1
mm9_v1_chr12_+_70994091_70994091	1.09292	NKX3-2.p2	NM_178628|Atl1|73991|atlastin GTPase 1
mm9_v1_chr11_-_69609381_69609404	1.09189	NKX3-2.p2	M14537|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr4_-_124527811_124527973	1.08961	NKX3-2.p2	NM_001142727|1110065P20Rik|68920|RIKEN cDNA 1110065P20 gene
mm9_v1_chr15_-_58614642_58614788	1.08884	NKX3-2.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr17_-_46169322_46169332	1.08618	NKX3-2.p2	NM_001025250|Vegfa|22339|vascular endothelial growth factor A	NM_001025257|Vegfa|22339|vascular endothelial growth factor A	NM_009505|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr14_+_22569752_22569797	1.08571	NKX3-2.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr2_+_121275069_121275180	1.08407	NKX3-2.p2	AK010749|Serf2|378702|small EDRK-rich factor 2	BC092136|Serf2|378702|small EDRK-rich factor 2	AK012395|Serf2|378702|small EDRK-rich factor 2	AK132746|Serf2|378702|small EDRK-rich factor 2	AK151362|Serf2|378702|small EDRK-rich factor 2	AK008802|Serf2|378702|small EDRK-rich factor 2	BC081455|Serf2|378702|small EDRK-rich factor 2	AF073297|Serf2|378702|small EDRK-rich factor 2	AK169106|Serf2|378702|small EDRK-rich factor 2	AK012603|Serf2|378702|small EDRK-rich factor 2	AK168858|Serf2|378702|small EDRK-rich factor 2	AK002351|Serf2|378702|small EDRK-rich factor 2	AK018746|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr7_+_137836057_137836069	1.08373	NKX3-2.p2	AB041546|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_021314|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr15_+_91881593_91881615	1.08369	NKX3-2.p2	AK138969|Cntn1|12805|contactin 1	NM_001159648|Cntn1|12805|contactin 1
mm9_v1_chr10_-_79869574_79869589	1.08328	NKX3-2.p2	AK003033|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI
mm9_v1_chr17_-_14831095_14831102	1.08226	NKX3-2.p2	L07803|Thbs2|21826|thrombospondin 2	M64866|Thbs2|21826|thrombospondin 2	AK132508|Thbs2|21826|thrombospondin 2
mm9_v1_chr19_+_4097344_4097450	1.0822	NKX3-2.p2	AK012121|Cdk2ap2|52004|CDK2-associated protein 2	AK018035|Cdk2ap2|52004|CDK2-associated protein 2	NM_026373|Cdk2ap2|52004|CDK2-associated protein 2	AK003686|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr5_+_54200903_54200980	1.08074	NKX3-2.p2	BC020138|Tbc1d19|67249|TBC1 domain family, member 19	AK012836|Tbc1d19|67249|TBC1 domain family, member 19	AK076128|Tbc1d19|67249|TBC1 domain family, member 19	AK177065|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr11_-_69609438_69609445	1.07951	NKX3-2.p2	NM_009601|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)	BC023318|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr17_-_7152648_7152744	1.07561	NKX3-2.p2	AK005904|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK016473|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK161285|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK006083|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	NM_001083945|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK076872|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)
mm9_v1_chr9_-_30957394_30957461	1.07303	NKX3-2.p2	
mm9_v1_chr11_+_69805051_69805216	1.07126	NKX3-2.p2	BC002126|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC024621|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK002879|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AF161587|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC029329|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK011731|Gabarap|56486|gamma-aminobutyric acid receptor associated protein
mm9_v1_chr5_+_102194207_102194308	1.07088	NKX3-2.p2	AF533367|Cds1|74596|CDP-diacylglycerol synthase 1
mm9_v1_chr15_-_73253534_73253557	1.06619	NKX3-2.p2	BC030180|Ptk2|14083|PTK2 protein tyrosine kinase 2	AK079821|Ptk2|14083|PTK2 protein tyrosine kinase 2
mm9_v1_chr5_-_42235518_42235530	1.06427	NKX3-2.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr6_+_29409404_29409478	1.06377	NKX3-2.p2	AK004264|Flnc|68794|filamin C, gamma	AF119148|Flnc|68794|filamin C, gamma
mm9_v1_chr11_-_106576585_106576603	1.06216	NKX3-2.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr5_-_122951791_122951906	1.06179	NKX3-2.p2	BC054531|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC054748|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ131821|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ223584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr7_+_52317798_52317879	1.06112	NKX3-2.p2	NM_001163684|Nosip|66394|nitric oxide synthase interacting protein	NM_025533|Nosip|66394|nitric oxide synthase interacting protein	AK007962|Nosip|66394|nitric oxide synthase interacting protein	AK010006|Nosip|66394|nitric oxide synthase interacting protein	BC089029|Nosip|66394|nitric oxide synthase interacting protein	AK076736|Nosip|66394|nitric oxide synthase interacting protein
mm9_v1_chr19_+_6306456_6306644	1.05907	NKX3-2.p2	NM_001033342|Cdc42bpg|240505|CDC42 binding protein kinase gamma (DMPK-like)
mm9_v1_chr11_-_6100453_6100453	1.05905	NKX3-2.p2	NM_173748|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr2_+_31804066_31804106	1.05814	NKX3-2.p2	AK004365|1110064A23Rik|68893|RIKEN cDNA 1110064A23 gene
mm9_v1_chr11_-_55233366_55233456	1.05775	NKX3-2.p2	AK049692|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK082283|Sparc|20692|secreted acidic cysteine rich glycoprotein	X04017|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK148670|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK161229|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK089114|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK159249|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr1_-_51972816_51972829	1.05678	NKX3-2.p2	NM_001161817|Myo1b|17912|myosin IB	NM_010863|Myo1b|17912|myosin IB
mm9_v1_chr1_-_65079296_65079339	1.05284	NKX3-2.p2	BC028632|Akr1cl|70861|aldo-keto reductase family 1, member C-like	AK014937|Akr1cl|70861|aldo-keto reductase family 1, member C-like	AK087842|Akr1cl|70861|aldo-keto reductase family 1, member C-like	AK135492|Akr1cl|70861|aldo-keto reductase family 1, member C-like	BC051128|Akr1cl|70861|aldo-keto reductase family 1, member C-like	NM_027582|Akr1cl|70861|aldo-keto reductase family 1, member C-like
mm9_v1_chr1_-_163181251_163181302	1.05217	NKX3-2.p2	BC013489|Prdx6|11758|peroxiredoxin 6	AK172888|Prdx6|11758|peroxiredoxin 6	AF004670|Prdx6|11758|peroxiredoxin 6	AK168223|Prdx6|11758|peroxiredoxin 6	AK076191|Prdx6|11758|peroxiredoxin 6	AK035097|Prdx6|11758|peroxiredoxin 6	AK081980|Prdx6|11758|peroxiredoxin 6	AF093852|Prdx6|11758|peroxiredoxin 6	AK030413|Prdx6|11758|peroxiredoxin 6	AK161710|Prdx6|11758|peroxiredoxin 6	BC061181|Prdx6|11758|peroxiredoxin 6	NM_007453|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr6_+_17290478_17290486	1.04936	NKX3-2.p2	AK010839|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr18_-_36829750_36829972	1.04921	NKX3-2.p2	AF092039|Sra1|24068|steroid receptor RNA activator 1	AK136702|Sra1|24068|steroid receptor RNA activator 1	AK154232|Sra1|24068|steroid receptor RNA activator 1	BC048362|Sra1|24068|steroid receptor RNA activator 1	AK007302|Sra1|24068|steroid receptor RNA activator 1	AK010375|Sra1|24068|steroid receptor RNA activator 1	NM_001164406|Sra1|24068|steroid receptor RNA activator 1	NM_025291|Sra1|24068|steroid receptor RNA activator 1
mm9_v1_chr9_+_75162059_75162070	1.04881	NKX3-2.p2	AK149908|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr18_+_38611212_38611226	1.0479	NKX3-2.p2	
mm9_v1_chr14_+_21537761_21537875	1.04646	NKX3-2.p2	BC027155|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr9_-_117539030_117539030	1.04418	NKX3-2.p2	AK046197|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172121|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr10_-_80052984_80053104	1.0433	NKX3-2.p2	BC005632|Fam108a|216169|family with sequence similarity 108, member A	BC082997|Fam108a|216169|family with sequence similarity 108, member A	AK170785|Fam108a|216169|family with sequence similarity 108, member A	NM_145421|Fam108a|216169|family with sequence similarity 108, member A
mm9_v1_chr16_+_92086695_92086827	1.04328	NKX3-2.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr16_-_97726447_97726544	1.04165	NKX3-2.p2	AF494380|Fam3b|52793|family with sequence similarity 3, member B	BC048949|Fam3b|52793|family with sequence similarity 3, member B	AK018571|Fam3b|52793|family with sequence similarity 3, member B	AF360358|Fam3b|52793|family with sequence similarity 3, member B	NM_020622|Fam3b|52793|family with sequence similarity 3, member B
mm9_v1_chr7_+_96781322_96781395	1.03968	NKX3-2.p2	AK032196|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial	NM_181407|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial	AK080798|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial
mm9_v1_chr19_-_4269161_4269181	1.03603	NKX3-2.p2	AK148293|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK171514|Ssh3|245857|slingshot homolog 3 (Drosophila)	AB099289|Ssh3|245857|slingshot homolog 3 (Drosophila)	BC028922|Ssh3|245857|slingshot homolog 3 (Drosophila)	NM_198113|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK038981|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK149880|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK166342|Ssh3|245857|slingshot homolog 3 (Drosophila)
mm9_v1_chr7_-_52650954_52651117	1.03602	NKX3-2.p2	BC131994|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	BC132020|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK011564|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	NM_009224|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	BC049128|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK005045|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK014311|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK133115|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK146729|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK077425|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK148013|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)
mm9_v1_chr8_+_96561135_96561146	1.03506	NKX3-2.p2	AK049824|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC040267|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chrX_-_45562050_45562056	1.03417	NKX3-2.p2	BC090832|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr5_-_77544147_77544201	1.03156	NKX3-2.p2	AF492703|Hopx|74318|HOP homeobox	NM_175606|Hopx|74318|HOP homeobox	AF534182|Hopx|74318|HOP homeobox
mm9_v1_chr11_-_55233339_55233353	1.02762	NKX3-2.p2	AK003162|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK133377|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK139473|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK146935|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr7_-_86887849_86887946	1.02616	NKX3-2.p2	BC023439|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	AK149387|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	AF093669|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	NM_011068|Pex11a|18631|peroxisomal biogenesis factor 11 alpha
mm9_v1_chr13_-_38620307_38620383	1.026	NKX3-2.p2	AK224952|Txndc5|105245|thioredoxin domain containing 5	AK224967|Txndc5|105245|thioredoxin domain containing 5	AY243534|Txndc5|105245|thioredoxin domain containing 5	AK169680|Txndc5|105245|thioredoxin domain containing 5	AK224923|Txndc5|105245|thioredoxin domain containing 5	AK225005|Txndc5|105245|thioredoxin domain containing 5	AK225014|Txndc5|105245|thioredoxin domain containing 5	BC016252|Txndc5|105245|thioredoxin domain containing 5	AK224999|Txndc5|105245|thioredoxin domain containing 5	AK224976|Txndc5|105245|thioredoxin domain containing 5	AK224965|Txndc5|105245|thioredoxin domain containing 5	AK224966|Txndc5|105245|thioredoxin domain containing 5	AK224979|Txndc5|105245|thioredoxin domain containing 5	AK224988|Txndc5|105245|thioredoxin domain containing 5	AK224947|Txndc5|105245|thioredoxin domain containing 5	AK224924|Txndc5|105245|thioredoxin domain containing 5	NM_145367|Txndc5|105245|thioredoxin domain containing 5	AK224939|Txndc5|105245|thioredoxin domain containing 5	AK224991|Txndc5|105245|thioredoxin domain containing 5	AK224992|Txndc5|105245|thioredoxin domain containing 5	AK224993|Txndc5|105245|thioredoxin domain containing 5	AK150781|Txndc5|105245|thioredoxin domain containing 5	AK224978|Txndc5|105245|thioredoxin domain containing 5	AK224938|Txndc5|105245|thioredoxin domain containing 5	AK224945|Txndc5|105245|thioredoxin domain containing 5	AK224977|Txndc5|105245|thioredoxin domain containing 5	AK224983|Txndc5|105245|thioredoxin domain containing 5	AK224990|Txndc5|105245|thioredoxin domain containing 5	AK142049|Txndc5|105245|thioredoxin domain containing 5	AK224946|Txndc5|105245|thioredoxin domain containing 5	AK224913|Txndc5|105245|thioredoxin domain containing 5	AK224972|Txndc5|105245|thioredoxin domain containing 5	AK224937|Txndc5|105245|thioredoxin domain containing 5	AK224989|Txndc5|105245|thioredoxin domain containing 5	AK224994|Txndc5|105245|thioredoxin domain containing 5	AK225004|Txndc5|105245|thioredoxin domain containing 5	AK225007|Txndc5|105245|thioredoxin domain containing 5	AK225010|Txndc5|105245|thioredoxin domain containing 5	AK225011|Txndc5|105245|thioredoxin domain containing 5	AK224934|Txndc5|105245|thioredoxin domain containing 5	AK224936|Txndc5|105245|thioredoxin domain containing 5	AK224951|Txndc5|105245|thioredoxin domain containing 5	AK224960|Txndc5|105245|thioredoxin domain containing 5	AK224982|Txndc5|105245|thioredoxin domain containing 5	AK225001|Txndc5|105245|thioredoxin domain containing 5	AK224927|Txndc5|105245|thioredoxin domain containing 5	AK224963|Txndc5|105245|thioredoxin domain containing 5	AK224964|Txndc5|105245|thioredoxin domain containing 5	AK224971|Txndc5|105245|thioredoxin domain containing 5	AK224986|Txndc5|105245|thioredoxin domain containing 5	AK225023|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr12_-_84938095_84938119	1.02538	NKX3-2.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr1_-_51972771_51972812	1.02411	NKX3-2.p2	BC054786|Myo1b|17912|myosin IB	AK161062|Myo1b|17912|myosin IB	AK141207|Myo1b|17912|myosin IB
mm9_v1_chr8_+_91045232_91045286	1.02338	NKX3-2.p2	AK166564|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	NM_027280|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK076164|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK082367|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	BC034838|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr4_-_49562400_49562417	1.02277	NKX3-2.p2	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr19_-_24630299_24630460	1.01988	NKX3-2.p2	AK164552|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	AK133809|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	AK146100|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	AK149354|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	NM_008846|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	AK077334|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	BC034864|Pip5k1b|18719|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
mm9_v1_chr5_+_43906796_43906826	1.0198	NKX3-2.p2	AK017441|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_001135172|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	BC090967|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr9_+_98323379_98323379	1.0171	NKX3-2.p2	NM_011254|Rbp1|19659|retinol binding protein 1, cellular	X60367|Rbp1|19659|retinol binding protein 1, cellular
mm9_v1_chr1_-_71632834_71632860	1.01506	NKX3-2.p2	BC020287|Fn1|14268|fibronectin 1
mm9_v1_chr5_+_104888468_104888623	1.01451	NKX3-2.p2	BC053058|Pkd2|18764|polycystic kidney disease 2	BC062969|Pkd2|18764|polycystic kidney disease 2	NM_008861|Pkd2|18764|polycystic kidney disease 2	FJ609779|Pkd2|18764|polycystic kidney disease 2	Y13278|Pkd2|18764|polycystic kidney disease 2	AK053502|Pkd2|18764|polycystic kidney disease 2	AF014010|Pkd2|18764|polycystic kidney disease 2	AK164673|Pkd2|18764|polycystic kidney disease 2	AK128961|Pkd2|18764|polycystic kidney disease 2
mm9_v1_chr14_-_31981750_31981759	1.01368	NKX3-2.p2	AF290914|Stab1|192187|stabilin 1	BC058607|Stab1|192187|stabilin 1
mm9_v1_chr6_+_29718424_29718454	1.01195	NKX3-2.p2	AK165725|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	NM_001171000|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	NM_021414|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr19_-_11155517_11155592	1.01036	NKX3-2.p2	AF237906|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A	AY039038|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A	AK008099|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A	BC042719|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A	AK172700|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A	NM_022430|Ms4a8a|64381|membrane-spanning 4-domains, subfamily A, member 8A
mm9_v1_chr6_-_113690657_113690706	1.0102	NKX3-2.p2	AK003354|Sec13|110379|SEC13 homolog (S. cerevisiae)	NM_024206|Sec13|110379|SEC13 homolog (S. cerevisiae)	BC002128|Sec13|110379|SEC13 homolog (S. cerevisiae)
mm9_v1_chr3_+_95087190_95087293	1.00965	NKX3-2.p2	
mm9_v1_chr2_-_32702610_32702727	1.0079	NKX3-2.p2	AF326545|Stxbp1|20910|syntaxin binding protein 1	AF326563|Stxbp1|20910|syntaxin binding protein 1	D45903|Stxbp1|20910|syntaxin binding protein 1	BC031728|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr19_+_21347181_21347203	1.0078	NKX3-2.p2	AF062071|Zfand5|22682|zinc finger, AN1-type domain 5	BC107566|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr2_+_76513326_76513402	1.00734	NKX3-2.p2	BC031110|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	NM_031256|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm9_v1_chr5_-_144288812_144288864	1.0048	NKX3-2.p2	BC051053|Rac1|19353|RAS-related C3 botulinum substrate 1	BC003828|Rac1|19353|RAS-related C3 botulinum substrate 1	AK008435|Rac1|19353|RAS-related C3 botulinum substrate 1	AK009017|Rac1|19353|RAS-related C3 botulinum substrate 1	AK011072|Rac1|19353|RAS-related C3 botulinum substrate 1	AK034601|Rac1|19353|RAS-related C3 botulinum substrate 1	AK166383|Rac1|19353|RAS-related C3 botulinum substrate 1	NM_009007|Rac1|19353|RAS-related C3 botulinum substrate 1	AK047969|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr10_+_5277477_5277627	1.00349	NKX3-2.p2	BC054456|Syne1|64009|synaptic nuclear envelope 1	NM_022027|Syne1|64009|synaptic nuclear envelope 1	AK036828|Syne1|64009|synaptic nuclear envelope 1	BC110428|Syne1|64009|synaptic nuclear envelope 1	AF281869|Syne1|64009|synaptic nuclear envelope 1	AK164813|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr6_-_31513817_31513936	0.998154	NKX3-2.p2	AB028048|Podxl|27205|podocalyxin-like	AF290209|Podxl|27205|podocalyxin-like	BC052442|Podxl|27205|podocalyxin-like	BC054530|Podxl|27205|podocalyxin-like	NM_013723|Podxl|27205|podocalyxin-like
mm9_v1_chr7_+_112706171_112706777	0.99555	NKX3-2.p2	AK205297|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK206661|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK214733|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK212303|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK182658|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205584|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK190375|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK195882|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK180590|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205699|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal
mm9_v1_chr11_-_69509220_69509255	0.995458	NKX3-2.p2	AF030100|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr11_+_71564204_71564204	0.995408	NKX3-2.p2	BC063070|Wscd1|216881|WSC domain containing 1	NM_177618|Wscd1|216881|WSC domain containing 1
mm9_v1_chr3_-_130412360_130412367	0.99362	NKX3-2.p2	NM_025509|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr16_+_70314306_70314318	0.993293	NKX3-2.p2	AK050365|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK050423|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1
mm9_v1_chr7_-_134158053_134158131	0.992968	NKX3-2.p2	BC006709|Mvp|78388|major vault protein	AK167899|Mvp|78388|major vault protein	AK168100|Mvp|78388|major vault protein	AK152534|Mvp|78388|major vault protein	AK088046|Mvp|78388|major vault protein	AF210456|Mvp|78388|major vault protein	NM_080638|Mvp|78388|major vault protein
mm9_v1_chr3_-_105746659_105746682	0.992639	NKX3-2.p2	U29530|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr12_+_9581302_9581328	0.992556	NKX3-2.p2	BC023922|Osr1|23967|odd-skipped related 1 (Drosophila)
mm9_v1_chr5_-_143668403_143668403	0.991043	NKX3-2.p2	AK078935|Actb|11461|actin, beta	AK145191|Actb|11461|actin, beta	AK145196|Actb|11461|actin, beta	AK145308|Actb|11461|actin, beta	AK149920|Actb|11461|actin, beta	AK150545|Actb|11461|actin, beta	AK150553|Actb|11461|actin, beta	AK150558|Actb|11461|actin, beta	AK150570|Actb|11461|actin, beta	AK150711|Actb|11461|actin, beta	AK150879|Actb|11461|actin, beta	AK151136|Actb|11461|actin, beta	AK151159|Actb|11461|actin, beta	AK151190|Actb|11461|actin, beta	AK151202|Actb|11461|actin, beta	AK151297|Actb|11461|actin, beta	AK151385|Actb|11461|actin, beta	AK151398|Actb|11461|actin, beta	AK151444|Actb|11461|actin, beta	AK151663|Actb|11461|actin, beta	AK151995|Actb|11461|actin, beta	AK151999|Actb|11461|actin, beta	AK152083|Actb|11461|actin, beta	AK152218|Actb|11461|actin, beta	AK152615|Actb|11461|actin, beta	AK152651|Actb|11461|actin, beta	AK152671|Actb|11461|actin, beta	AK152813|Actb|11461|actin, beta	AK152841|Actb|11461|actin, beta	AK166349|Actb|11461|actin, beta	AK166498|Actb|11461|actin, beta	AK167117|Actb|11461|actin, beta	AK167825|Actb|11461|actin, beta	AK167960|Actb|11461|actin, beta
mm9_v1_chr1_+_92811676_92811782	0.99098	NKX3-2.p2	NM_053015|Mlph|171531|melanophilin	AF384098|Mlph|171531|melanophilin	BC006900|Mlph|171531|melanophilin	AK008973|Mlph|171531|melanophilin	AK019883|Mlph|171531|melanophilin	AK148274|Mlph|171531|melanophilin	BC150804|Mlph|171531|melanophilin
mm9_v1_chr19_-_5457470_5457607	0.990785	NKX3-2.p2	BC016659|Ccdc85b|240514|coiled-coil domain containing 85B	BC094592|Ccdc85b|240514|coiled-coil domain containing 85B	BC058411|Ccdc85b|240514|coiled-coil domain containing 85B	NM_198616|Ccdc85b|240514|coiled-coil domain containing 85B
mm9_v1_chr7_+_148633501_148633587	0.990574	NKX3-2.p2	AK008344|Rplp2|67186|ribosomal protein, large P2	AK010618|Rplp2|67186|ribosomal protein, large P2	AK012526|Rplp2|67186|ribosomal protein, large P2	NM_026020|Rplp2|67186|ribosomal protein, large P2	AK088737|Rplp2|67186|ribosomal protein, large P2	AK134206|Rplp2|67186|ribosomal protein, large P2	AK028140|Rplp2|67186|ribosomal protein, large P2	AK028149|Rplp2|67186|ribosomal protein, large P2	AK012402|Rplp2|67186|ribosomal protein, large P2	BC012413|Rplp2|67186|ribosomal protein, large P2	AK002419|Rplp2|67186|ribosomal protein, large P2	AK166774|Rplp2|67186|ribosomal protein, large P2
mm9_v1_chr19_+_4594318_4594387	0.989989	NKX3-2.p2	NM_008797|Pcx|18563|pyruvate carboxylase	L09192|Pcx|18563|pyruvate carboxylase
mm9_v1_chr15_+_102820969_102821018	0.989087	NKX3-2.p2	NM_010466|Hoxc8|15426|homeobox C8	X07439|Hoxc8|15426|homeobox C8
mm9_v1_chr4_-_117963950_117964031	0.987465	NKX3-2.p2	NM_011213|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chr11_-_98261774_98261803	0.985145	NKX3-2.p2	NM_001033537|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr18_+_9212853_9212853	0.983631	NKX3-2.p2	BC132543|Fzd8|14370|frizzled homolog 8 (Drosophila)	BC138062|Fzd8|14370|frizzled homolog 8 (Drosophila)	NM_008058|Fzd8|14370|frizzled homolog 8 (Drosophila)
mm9_v1_chr15_-_99650502_99650572	0.982978	NKX3-2.p2	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr11_-_21270779_21270881	0.97874	NKX3-2.p2	NM_139297|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr10_+_127472624_127472720	0.978104	NKX3-2.p2	AK169432|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146197|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AL355707|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168023|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	U48364|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146149|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168169|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK151928|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK169435|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK161678|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC029830|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC083340|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168607|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chrX_+_20276404_20276539	0.977338	NKX3-2.p2	AK177013|Cdk16|18555|cyclin-dependent kinase 16	AK212751|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr13_+_42961598_42961632	0.975272	NKX3-2.p2	AK139452|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr8_+_96561097_96561129	0.974419	NKX3-2.p2	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr11_-_120588536_120588599	0.971857	NKX3-2.p2	D89656|Dcxr|67880|dicarbonyl L-xylulose reductase	AK161732|Dcxr|67880|dicarbonyl L-xylulose reductase	AK002803|Dcxr|67880|dicarbonyl L-xylulose reductase	AK153521|Dcxr|67880|dicarbonyl L-xylulose reductase	AK004023|Dcxr|67880|dicarbonyl L-xylulose reductase	AK007627|Dcxr|67880|dicarbonyl L-xylulose reductase	NM_026428|Dcxr|67880|dicarbonyl L-xylulose reductase
mm9_v1_chr7_+_3596861_3596991	0.971797	NKX3-2.p2	AK172439|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	NM_146176|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK141718|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK044755|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK031774|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC030332|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr11_+_60268108_60268134	0.969213	NKX3-2.p2	AJ243590|Drg2|13495|developmentally regulated GTP binding protein 2	NM_021354|Drg2|13495|developmentally regulated GTP binding protein 2
mm9_v1_chr3_+_120994646_120994734	0.965411	NKX3-2.p2	AK011733|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	BC002278|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	NM_024178|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)
mm9_v1_chr5_-_143668369_143668395	0.964882	NKX3-2.p2	BC138611|Actb|11461|actin, beta	BC138614|Actb|11461|actin, beta	AK179836|Actb|11461|actin, beta	AK180740|Actb|11461|actin, beta	AK180898|Actb|11461|actin, beta	AK184086|Actb|11461|actin, beta	AK184228|Actb|11461|actin, beta	AK187727|Actb|11461|actin, beta	J04181|Actb|11461|actin, beta
mm9_v1_chr7_-_140315030_140315061	0.962903	NKX3-2.p2	AB033123|Ctbp2|13017|C-terminal binding protein 2	AK147871|Ctbp2|13017|C-terminal binding protein 2	AK146713|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr5_-_137974398_137974535	0.957244	NKX3-2.p2	BC062178|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK002604|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK151628|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	NM_010312|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	Y11970|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK146941|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr16_+_24721940_24721951	0.957013	NKX3-2.p2	AK029567|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145954|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK076989|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr18_+_74375754_74375784	0.953972	NKX3-2.p2	AK017941|Cxxc1|74322|CXXC finger 1 (PHD domain)	AK146688|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr2_+_172825651_172825682	0.953337	NKX3-2.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr11_-_69609411_69609422	0.952928	NKX3-2.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr14_+_51715674_51715674	0.951965	NKX3-2.p2	AK159966|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_007447|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_201239|Rnase4|58809|ribonuclease, RNase A family 4
mm9_v1_chr3_-_80606500_80606592	0.95144	NKX3-2.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr10_-_80813039_80813052	0.948955	NKX3-2.p2	AK155890|Hmg20b|15353|high mobility group 20 B
mm9_v1_chr10_+_94977721_94977835	0.94669	NKX3-2.p2	AK005302|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK161968|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK005788|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC067069|Ube2n|93765|ubiquitin-conjugating enzyme E2N	NM_080560|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AY039837|Ube2n|93765|ubiquitin-conjugating enzyme E2N	Y09873|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC034898|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC052203|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC132630|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC138211|Ube2n|93765|ubiquitin-conjugating enzyme E2N
mm9_v1_chr9_+_108855789_108855789	0.945633	NKX3-2.p2	NM_007738|Col7a1|12836|collagen, type VII, alpha 1	U32107|Col7a1|12836|collagen, type VII, alpha 1
mm9_v1_chr8_+_75095914_75096060	0.943734	NKX3-2.p2	AK157969|Tmem38a|74166|transmembrane protein 38A	AK165818|Tmem38a|74166|transmembrane protein 38A	EF988666|Tmem38a|74166|transmembrane protein 38A	BC014728|Tmem38a|74166|transmembrane protein 38A	AK034868|Nwd1|319555|NACHT and WD repeat domain containing 1	BC024788|Tmem38a|74166|transmembrane protein 38A	NM_144534|Tmem38a|74166|transmembrane protein 38A	AB261158|Tmem38a|74166|transmembrane protein 38A
mm9_v1_chr15_-_8660479_8660490	0.942596	NKX3-2.p2	AK045949|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK080879|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chrX_+_139952975_139953253	0.939896	NKX3-2.p2	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr11_-_4749311_4749550	0.939483	NKX3-2.p2	L28176|Nf2|18016|neurofibromatosis 2	AK045998|Nf2|18016|neurofibromatosis 2	BC005442|Nf2|18016|neurofibromatosis 2	NM_010898|Nf2|18016|neurofibromatosis 2	X74671|Nf2|18016|neurofibromatosis 2
mm9_v1_chr2_+_157105117_157105161	0.938692	NKX3-2.p2	AK153952|Rpn2|20014|ribophorin II
mm9_v1_chr11_+_57917469_57917691	0.93626	NKX3-2.p2	AK150757|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK153907|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	BC004040|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	NM_026949|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK075727|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AY515608|Cnot8|69125|CCR4-NOT transcription complex, subunit 8
mm9_v1_chr11_+_60268143_60268162	0.935454	NKX3-2.p2	AK012988|Drg2|13495|developmentally regulated GTP binding protein 2	BC082564|Drg2|13495|developmentally regulated GTP binding protein 2
mm9_v1_chr1_-_94538517_94538563	0.934345	NKX3-2.p2	AK152318|Myeov2|66915|myeloma overexpressed 2	AK012198|Myeov2|66915|myeloma overexpressed 2	AK003315|Myeov2|66915|myeloma overexpressed 2	BC147334|Myeov2|66915|myeloma overexpressed 2	BC147335|Myeov2|66915|myeloma overexpressed 2	BC147659|Myeov2|66915|myeloma overexpressed 2	BC147669|Myeov2|66915|myeloma overexpressed 2	BC049759|Myeov2|66915|myeloma overexpressed 2	NM_001163425|Myeov2|66915|myeloma overexpressed 2
mm9_v1_chr16_-_38433223_38433224	0.93306	NKX3-2.p2	BC030670|Pla1a|85031|phospholipase A1 member A	AF063498|Pla1a|85031|phospholipase A1 member A	NM_134102|Pla1a|85031|phospholipase A1 member A
mm9_v1_chr6_-_115201866_115201882	0.932141	NKX3-2.p2	AK079347|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK140367|Timp4|110595|tissue inhibitor of metalloproteinase 4	NM_080639|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr10_+_77079550_77079583	0.928793	NKX3-2.p2	
mm9_v1_chr13_+_21925611_21925647	0.927342	NKX3-2.p2	AK036389|Hist1h2br|665622|histone cluster 1 H2br	NM_001097979|Hist1h2bq|665596|histone cluster 1, H2bq	NM_001110555|Hist1h2br|665622|histone cluster 1 H2br	BC011440|Hist1h2br|665622|histone cluster 1 H2br	BC115792|Hist1h2bj|319183|histone cluster 1, H2bj
mm9_v1_chr8_+_108674263_108674491	0.92334	NKX3-2.p2	AK028614|Pla2g15|192654|phospholipase A2, group XV	BC019373|Pla2g15|192654|phospholipase A2, group XV	NM_133792|Pla2g15|192654|phospholipase A2, group XV	AK155004|Pla2g15|192654|phospholipase A2, group XV	AK085194|Pla2g15|192654|phospholipase A2, group XV	AK163111|Pla2g15|192654|phospholipase A2, group XV	AK170814|Pla2g15|192654|phospholipase A2, group XV	AF468958|Pla2g15|192654|phospholipase A2, group XV	AK180645|Pla2g15|192654|phospholipase A2, group XV	AK188333|Pla2g15|192654|phospholipase A2, group XV	AK205252|Pla2g15|192654|phospholipase A2, group XV	AK205480|Pla2g15|192654|phospholipase A2, group XV	AK207442|Pla2g15|192654|phospholipase A2, group XV	AK211077|Pla2g15|192654|phospholipase A2, group XV	AK212406|Pla2g15|192654|phospholipase A2, group XV	AK212507|Pla2g15|192654|phospholipase A2, group XV	AK212587|Pla2g15|192654|phospholipase A2, group XV	AK212623|Pla2g15|192654|phospholipase A2, group XV	AK215050|Pla2g15|192654|phospholipase A2, group XV	AK215274|Pla2g15|192654|phospholipase A2, group XV	AK217196|Pla2g15|192654|phospholipase A2, group XV	AK219754|Pla2g15|192654|phospholipase A2, group XV
mm9_v1_chr6_+_87859720_87859763	0.922083	NKX3-2.p2	AK192006|Copg|54161|coatomer protein complex, subunit gamma	AK196464|Copg|54161|coatomer protein complex, subunit gamma
mm9_v1_chr17_+_6106829_6106853	0.921782	NKX3-2.p2	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chrX_+_130829929_130829942	0.920868	NKX3-2.p2	AK005180|Tmem35|67564|transmembrane protein 35	AK018535|Tmem35|67564|transmembrane protein 35	AK043881|Tmem35|67564|transmembrane protein 35	AK042538|Tmem35|67564|transmembrane protein 35
mm9_v1_chr16_+_94592373_94592458	0.919363	NKX3-2.p2	AK165850|Ttc3|22129|tetratricopeptide repeat domain 3	AK166120|Ttc3|22129|tetratricopeptide repeat domain 3	BC019173|Ttc3|22129|tetratricopeptide repeat domain 3	BC057207|Ttc3|22129|tetratricopeptide repeat domain 3	AK084201|Ttc3|22129|tetratricopeptide repeat domain 3	AK166164|Ttc3|22129|tetratricopeptide repeat domain 3	AK166298|Ttc3|22129|tetratricopeptide repeat domain 3	AK089974|Ttc3|22129|tetratricopeptide repeat domain 3	BC037654|Ttc3|22129|tetratricopeptide repeat domain 3	AK220495|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr14_+_28051224_28051247	0.917256	NKX3-2.p2	AK004600|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	NM_027871|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036737|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036749|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr16_-_94592586_94592621	0.915908	NKX3-2.p2	AF216309|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC038252|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159617|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_019543|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr1_+_45402907_45402949	0.911084	NKX3-2.p2	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr17_-_14831058_14831092	0.910985	NKX3-2.p2	BC053702|Thbs2|21826|thrombospondin 2
mm9_v1_chrX_-_137908516_137908603	0.910903	NKX3-2.p2	BC057648|Col4a6|94216|collagen, type IV, alpha 6	AK165178|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr2_+_151368197_151368330	0.910519	NKX3-2.p2	NM_008019|Fkbp1a|14225|FK506 binding protein 1a	AK019362|Fkbp1a|14225|FK506 binding protein 1a	AK010693|Fkbp1a|14225|FK506 binding protein 1a	AK145400|Fkbp1a|14225|FK506 binding protein 1a	AK169242|Fkbp1a|14225|FK506 binding protein 1a	AK141261|Fkbp1a|14225|FK506 binding protein 1a	AK168333|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chr19_+_45092581_45092707	0.906026	NKX3-2.p2	NM_001130526|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK081367|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK129446|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr2_+_179854119_179854151	0.904037	NKX3-2.p2	AK161695|Osbpl2|228983|oxysterol binding protein-like 2	AK048537|Osbpl2|228983|oxysterol binding protein-like 2
mm9_v1_chr18_+_23468585_23468619	0.903219	NKX3-2.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr8_-_64238814_64238834	0.902047	NKX3-2.p2	AK173081|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr5_-_37221812_37221913	0.901127	NKX3-2.p2	BC066211|Man2b2|17160|mannosidase 2, alpha B2	AK004900|Man2b2|17160|mannosidase 2, alpha B2	AK040388|Man2b2|17160|mannosidase 2, alpha B2	AK151873|Man2b2|17160|mannosidase 2, alpha B2	AK152349|Man2b2|17160|mannosidase 2, alpha B2	AB006458|Man2b2|17160|mannosidase 2, alpha B2	AK079969|Man2b2|17160|mannosidase 2, alpha B2	AK165376|Man2b2|17160|mannosidase 2, alpha B2	NM_008550|Man2b2|17160|mannosidase 2, alpha B2
mm9_v1_chr2_+_157105002_157105058	0.900942	NKX3-2.p2	AK161624|Rpn2|20014|ribophorin II	AK166778|Rpn2|20014|ribophorin II	AK167864|Rpn2|20014|ribophorin II	AK167866|Rpn2|20014|ribophorin II	AK168221|Rpn2|20014|ribophorin II
mm9_v1_chr5_-_51848420_51848454	0.897888	NKX3-2.p2	AK032149|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK082685|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK043827|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr4_+_42962733_42962813	0.897797	NKX3-2.p2	AK158535|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	AF321322|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr15_+_98465328_98465599	0.897466	NKX3-2.p2	U20372|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit	AF498245|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit	AF498246|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit
mm9_v1_chr6_+_81991613_81991706	0.897077	NKX3-2.p2	AK145140|Fam176a|232146|family with sequence similarity 176, member A	NM_145570|Fam176a|232146|family with sequence similarity 176, member A	BC027150|Fam176a|232146|family with sequence similarity 176, member A	AK166504|Fam176a|232146|family with sequence similarity 176, member A	BC014699|Fam176a|232146|family with sequence similarity 176, member A
mm9_v1_chr14_-_104243474_104243491	0.896444	NKX3-2.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr7_+_97535516_97535523	0.895831	NKX3-2.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr6_+_124959207_124959358	0.893186	NKX3-2.p2	AK156026|Zfp384|269800|zinc finger protein 384	AK172476|Zfp384|269800|zinc finger protein 384
mm9_v1_chr18_+_60934249_60934326	0.889804	NKX3-2.p2	NM_020600|Rps14|20044|ribosomal protein S14	AK028106|Rps14|20044|ribosomal protein S14	AK003148|Rps14|20044|ribosomal protein S14	AK011213|Rps14|20044|ribosomal protein S14	AK012425|Rps14|20044|ribosomal protein S14	AK012584|Rps14|20044|ribosomal protein S14	AK019233|Rps14|20044|ribosomal protein S14	AK146976|Rps14|20044|ribosomal protein S14	AK168237|Rps14|20044|ribosomal protein S14	AK146325|Rps14|20044|ribosomal protein S14	BC042940|Rps14|20044|ribosomal protein S14	BC062874|Rps14|20044|ribosomal protein S14
mm9_v1_chr10_-_57252252_57252346	0.882519	NKX3-2.p2	AF181685|Serinc1|56442|serine incorporator 1	AK148745|Serinc1|56442|serine incorporator 1	AK050514|Serinc1|56442|serine incorporator 1	AB029500|Serinc1|56442|serine incorporator 1	AK088340|Serinc1|56442|serine incorporator 1	AK133668|Serinc1|56442|serine incorporator 1	AK133975|Serinc1|56442|serine incorporator 1	AK161707|Serinc1|56442|serine incorporator 1	AK005203|Serinc1|56442|serine incorporator 1	AK167817|Serinc1|56442|serine incorporator 1	AK002847|Serinc1|56442|serine incorporator 1	AK141574|Serinc1|56442|serine incorporator 1	AK160498|Serinc1|56442|serine incorporator 1	AK159436|Serinc1|56442|serine incorporator 1	BC006940|Serinc1|56442|serine incorporator 1	NM_019760|Serinc1|56442|serine incorporator 1
mm9_v1_chr17_+_8138805_8138869	0.881907	NKX3-2.p2	BC054439|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC085294|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK007979|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr10_+_98377759_98377828	0.880823	NKX3-2.p2	AK133920|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	NM_026482|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170163|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	BC024831|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170926|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr8_+_107800370_107800401	0.880339	NKX3-2.p2	BC053971|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK021023|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr2_+_128644032_128644119	0.879615	NKX3-2.p2	NM_028248|Tmem87b|72477|transmembrane protein 87B	AK050203|Tmem87b|72477|transmembrane protein 87B	AK166991|Tmem87b|72477|transmembrane protein 87B	AK164504|Tmem87b|72477|transmembrane protein 87B	AK171811|Tmem87b|72477|transmembrane protein 87B	AK172611|Tmem87b|72477|transmembrane protein 87B	BC031488|Tmem87b|72477|transmembrane protein 87B	AK011959|Tmem87b|72477|transmembrane protein 87B
mm9_v1_chrX_-_49033640_49033666	0.879191	NKX3-2.p2	AK083281|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	BC063327|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK171680|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	NM_015819|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr4_-_4065927_4065977	0.876826	NKX3-2.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chr5_+_117807290_117807469	0.876683	NKX3-2.p2	AK080976|Wsb2|59043|WD repeat and SOCS box-containing 2	BC055100|Wsb2|59043|WD repeat and SOCS box-containing 2	NM_021539|Wsb2|59043|WD repeat and SOCS box-containing 2	AK157999|Wsb2|59043|WD repeat and SOCS box-containing 2	AF072881|Wsb2|59043|WD repeat and SOCS box-containing 2	AF033188|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr5_-_109012019_109012139	0.875662	NKX3-2.p2	BC003958|Gak|231580|cyclin G associated kinase
mm9_v1_chr19_-_4439350_4439433	0.875371	NKX3-2.p2	X84325|Rhod|11854|ras homolog gene family, member D	BC005652|Rhod|11854|ras homolog gene family, member D	AK008880|Rhod|11854|ras homolog gene family, member D	NM_007485|Rhod|11854|ras homolog gene family, member D	BC047989|Rhod|11854|ras homolog gene family, member D	D89821|Rhod|11854|ras homolog gene family, member D
mm9_v1_chr12_-_58646914_58647013	0.87509	NKX3-2.p2	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chr5_+_23931049_23931208	0.874901	NKX3-2.p2	NM_009207|Slc4a2|20535|solute carrier family 4 (anion exchanger), member 2	AK147858|Slc4a2|20535|solute carrier family 4 (anion exchanger), member 2	AK145930|Slc4a2|20535|solute carrier family 4 (anion exchanger), member 2	J04036|Slc4a2|20535|solute carrier family 4 (anion exchanger), member 2
mm9_v1_chr5_+_38430461_38430564	0.872952	NKX3-2.p2	AK007700|Stx18|71116|syntaxin 18	AK170165|Stx18|71116|syntaxin 18	NM_026959|Stx18|71116|syntaxin 18	BC021362|Stx18|71116|syntaxin 18	AK169273|Stx18|71116|syntaxin 18	AK016910|Stx18|71116|syntaxin 18
mm9_v1_chr17_+_35272145_35272203	0.870354	NKX3-2.p2	NM_057171|Bag6|224727|BCL2-associated athanogene 6	AK148796|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr6_-_23789048_23789235	0.870257	NKX3-2.p2	AF000969|Cadps2|320405|Ca2+-dependent activator protein for secretion 2	BC047394|Cadps2|320405|Ca2+-dependent activator protein for secretion 2	AY072800|Cadps2|320405|Ca2+-dependent activator protein for secretion 2	AK038568|Cadps2|320405|Ca2+-dependent activator protein for secretion 2	AB291947|Cadps2|320405|Ca2+-dependent activator protein for secretion 2
mm9_v1_chr10_-_127986187_127986227	0.869447	NKX3-2.p2	NM_018860|Rpl41|67945|ribosomal protein L41
mm9_v1_chr5_+_54200858_54200899	0.868968	NKX3-2.p2	NM_144517|Tbc1d19|67249|TBC1 domain family, member 19	AK083084|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr19_-_7061958_7062092	0.867839	NKX3-2.p2	U48800|Vegfb|22340|vascular endothelial growth factor B	U52820|Vegfb|22340|vascular endothelial growth factor B	U43836|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr3_-_108248053_108248111	0.864432	NKX3-2.p2	AK077309|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC008612|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC031932|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK147825|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK082793|Sars|20226|seryl-aminoacyl-tRNA synthetase	NM_011319|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK028358|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK075827|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr4_+_101390472_101390526	0.864414	NKX3-2.p2	AK155891|Lepr|16847|leptin receptor	U58861|Lepr|16847|leptin receptor	U58862|Lepr|16847|leptin receptor	U58863|Lepr|16847|leptin receptor	AB519175|Lepr|16847|leptin receptor	AB519174|Lepr|16847|leptin receptor	AK140785|Lepr|16847|leptin receptor	U42467|Lepr|16847|leptin receptor	U46135|Lepr|16847|leptin receptor	AB519177|Lepr|16847|leptin receptor	AB519178|Lepr|16847|leptin receptor	AB519176|Lepr|16847|leptin receptor	BC082551|Lepr|16847|leptin receptor
mm9_v1_chr19_-_41151561_41151602	0.86197	NKX3-2.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chr1_-_66981900_66981939	0.86175	NKX3-2.p2	BC059087|Myl1|17901|myosin, light polypeptide 1	AK009938|Myl1|17901|myosin, light polypeptide 1	NM_001113387|Myl1|17901|myosin, light polypeptide 1
mm9_v1_chr6_-_66987377_66987402	0.859955	NKX3-2.p2	BC011141|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	AK144900|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	L28177|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	NM_007836|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha
mm9_v1_chr17_+_24686778_24686992	0.857519	NKX3-2.p2	BC099589|Pkd1|18763|polycystic kidney disease 1 homolog	NM_013630|Pkd1|18763|polycystic kidney disease 1 homolog	U70209|Pkd1|18763|polycystic kidney disease 1 homolog
mm9_v1_chr3_+_95354031_95354039	0.856991	NKX3-2.p2	AJ223208|Ctss|13040|cathepsin S
mm9_v1_chr4_-_40994996_40995002	0.8569	NKX3-2.p2	AB056091|Aqp7|11832|aquaporin 7
mm9_v1_chr5_-_144031617_144031663	0.856037	NKX3-2.p2	BC057078|Zfp316|54201|zinc finger protein 316
mm9_v1_chr3_+_80841086_80841191	0.855194	NKX3-2.p2	AK052947|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC029099|Pdgfc|54635|platelet-derived growth factor, C polypeptide	AF117608|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC037696|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr11_+_69804871_69804873	0.852481	NKX3-2.p2	NM_019749|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC030350|Gabarap|56486|gamma-aminobutyric acid receptor associated protein
mm9_v1_chr17_-_13108931_13109013	0.851745	NKX3-2.p2	BC011425|Mrpl18|67681|mitochondrial ribosomal protein L18	AK008680|Mrpl18|67681|mitochondrial ribosomal protein L18	NM_026310|Mrpl18|67681|mitochondrial ribosomal protein L18	AK003104|Mrpl18|67681|mitochondrial ribosomal protein L18	AK010150|Mrpl18|67681|mitochondrial ribosomal protein L18
mm9_v1_chrX_+_97970079_97970142	0.851446	NKX3-2.p2	AK145815|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr18_+_74375999_74376040	0.850955	NKX3-2.p2	BC030938|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr8_+_87560809_87560830	0.848811	NKX3-2.p2	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr10_-_58684199_58684290	0.847205	NKX3-2.p2	BC053752|Sept10|103080|septin 10
mm9_v1_chr16_+_94592307_94592357	0.845924	NKX3-2.p2	AK088273|Ttc3|22129|tetratricopeptide repeat domain 3	NM_009441|Ttc3|22129|tetratricopeptide repeat domain 3	AK053765|Ttc3|22129|tetratricopeptide repeat domain 3	AK170087|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr14_-_35187767_35187878	0.845364	NKX3-2.p2	AJ786826|Sncg|20618|synuclein, gamma	AF017255|Sncg|20618|synuclein, gamma	AK141509|Sncg|20618|synuclein, gamma	BC028508|Sncg|20618|synuclein, gamma	NM_011430|Sncg|20618|synuclein, gamma
mm9_v1_chr15_+_78813524_78813616	0.843811	NKX3-2.p2	AK053194|Triobp|110253|TRIO and F-actin binding protein	AK170390|Triobp|110253|TRIO and F-actin binding protein	BC042760|Triobp|110253|TRIO and F-actin binding protein	AK197781|Triobp|110253|TRIO and F-actin binding protein
mm9_v1_chr17_-_14831233_14831243	0.842121	NKX3-2.p2	AK142552|Thbs2|21826|thrombospondin 2
mm9_v1_chr13_+_13876667_13876805	0.840935	NKX3-2.p2	BC016506|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4	NM_010317|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr8_+_12915892_12915957	0.840934	NKX3-2.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr2_-_163298253_163298393	0.840612	NKX3-2.p2	AK036997|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK040900|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC064032|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK052945|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK163611|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC138522|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC138532|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK054016|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC090994|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK043244|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK080142|Fitm2|228859|fat storage-inducing transmembrane protein 2	NM_173397|Fitm2|228859|fat storage-inducing transmembrane protein 2
mm9_v1_chr15_-_98638230_98638263	0.839688	NKX3-2.p2	AK122363|Ddn|13199|dendrin
mm9_v1_chrX_+_131291100_131291196	0.839604	NKX3-2.p2	NM_027870|Armcx3|71703|armadillo repeat containing, X-linked 3	AK030729|Armcx3|71703|armadillo repeat containing, X-linked 3	AK004598|Armcx3|71703|armadillo repeat containing, X-linked 3	BC051113|Armcx3|71703|armadillo repeat containing, X-linked 3	BC108360|Armcx3|71703|armadillo repeat containing, X-linked 3
mm9_v1_chr5_+_93696645_93696792	0.839591	NKX3-2.p2	BC060180|Ccng2|12452|cyclin G2	BC088980|Ccng2|12452|cyclin G2
mm9_v1_chr7_+_4874478_4874551	0.838764	NKX3-2.p2	AK163549|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr10_+_79578529_79578555	0.838546	NKX3-2.p2	AK171909|Stk11|20869|serine/threonine kinase 11	AK172385|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr10_+_90292453_90292587	0.838506	NKX3-2.p2	AK038609|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr5_-_130354822_130354958	0.837315	NKX3-2.p2	J03293|Phkg1|18682|phosphorylase kinase gamma 1	BC055102|Phkg1|18682|phosphorylase kinase gamma 1	NM_011079|Phkg1|18682|phosphorylase kinase gamma 1	AK079361|Phkg1|18682|phosphorylase kinase gamma 1
mm9_v1_chr17_-_56358176_56358341	0.836829	NKX3-2.p2	AK050021|Dpp9|224897|dipeptidylpeptidase 9	AK078301|Dpp9|224897|dipeptidylpeptidase 9	BC057631|Dpp9|224897|dipeptidylpeptidase 9	AK050023|Dpp9|224897|dipeptidylpeptidase 9	NM_172624|Dpp9|224897|dipeptidylpeptidase 9	AK039652|Dpp9|224897|dipeptidylpeptidase 9
mm9_v1_chr8_+_130883151_130883243	0.836456	NKX3-2.p2	AK040447|Nrp1|18186|neuropilin 1	AK030358|Nrp1|18186|neuropilin 1	BC038657|Nrp1|18186|neuropilin 1	AK141964|Nrp1|18186|neuropilin 1	BC051447|Nrp1|18186|neuropilin 1	AK159219|Nrp1|18186|neuropilin 1	BC060129|Nrp1|18186|neuropilin 1
mm9_v1_chr10_+_86984705_86984718	0.833185	NKX3-2.p2	X51942|Pah|18478|phenylalanine hydroxylase
mm9_v1_chr15_-_75911326_75911375	0.831372	NKX3-2.p2	AK151526|Puf60|67959|poly-U binding splicing factor 60	AK149632|Puf60|67959|poly-U binding splicing factor 60	AK075960|Puf60|67959|poly-U binding splicing factor 60	AK168789|Puf60|67959|poly-U binding splicing factor 60	AK146534|Puf60|67959|poly-U binding splicing factor 60	NM_028364|Puf60|67959|poly-U binding splicing factor 60	NM_133691|Puf60|67959|poly-U binding splicing factor 60
mm9_v1_chr11_-_116689301_116689440	0.82859	NKX3-2.p2	AK021409|Mxra7|67622|matrix-remodelling associated 7	BC075618|Mxra7|67622|matrix-remodelling associated 7	AK012601|Mxra7|67622|matrix-remodelling associated 7	AK075801|Mxra7|67622|matrix-remodelling associated 7	NM_026280|Mxra7|67622|matrix-remodelling associated 7	BC147320|Mxra7|67622|matrix-remodelling associated 7	BC147321|Mxra7|67622|matrix-remodelling associated 7
mm9_v1_chr6_+_90424727_90424917	0.826978	NKX3-2.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr19_-_5609896_5610062	0.823501	NKX3-2.p2	AK195015|Kat5|81601|K(lysine) acetyltransferase 5	AK159568|Kat5|81601|K(lysine) acetyltransferase 5	AK160077|Kat5|81601|K(lysine) acetyltransferase 5	BC129967|Kat5|81601|K(lysine) acetyltransferase 5	AF528195|Kat5|81601|K(lysine) acetyltransferase 5	AF528196|Kat5|81601|K(lysine) acetyltransferase 5	BC129968|Kat5|81601|K(lysine) acetyltransferase 5	DQ139980|Kat5|81601|K(lysine) acetyltransferase 5	NM_178637|Kat5|81601|K(lysine) acetyltransferase 5	BC110675|Kat5|81601|K(lysine) acetyltransferase 5	AK143674|Kat5|81601|K(lysine) acetyltransferase 5	AK146352|Kat5|81601|K(lysine) acetyltransferase 5
mm9_v1_chr8_-_47292863_47292905	0.822081	NKX3-2.p2	
mm9_v1_chr5_-_136410216_136410278	0.821552	NKX3-2.p2	AK183704|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	CT010208|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr11_+_43247252_43247280	0.818519	NKX3-2.p2	BC082780|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC025870|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK046262|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK029117|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK049178|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC060954|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr10_+_98486068_98486102	0.81697	NKX3-2.p2	AK136761|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr12_+_4234026_4234103	0.814531	NKX3-2.p2	BC067010|2410017P09Rik|69709|RIKEN cDNA 2410017P09 gene	AK010531|2410017P09Rik|69709|RIKEN cDNA 2410017P09 gene
mm9_v1_chr12_+_45370145_45370261	0.813789	NKX3-2.p2	AK004621|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK163211|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK029616|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK168475|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK145776|Pnpla8|67452|patatin-like phospholipase domain containing 8	AB044139|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr7_+_31536489_31536560	0.813533	NKX3-2.p2	BC051531|Sbsn|282619|suprabasin	NM_001083903|Sbsn|282619|suprabasin	NM_172205|Sbsn|282619|suprabasin	AY115494|Sbsn|282619|suprabasin	AY444556|Sbsn|282619|suprabasin	BC139385|Sbsn|282619|suprabasin	AK081760|Sbsn|282619|suprabasin	BC092350|Sbsn|282619|suprabasin
mm9_v1_chr6_+_86799460_86799754	0.811809	NKX3-2.p2	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr8_-_67071497_67071512	0.8114	NKX3-2.p2	
mm9_v1_chr11_+_71564481_71564540	0.810922	NKX3-2.p2	BC030477|Wscd1|216881|WSC domain containing 1
mm9_v1_chr1_-_137155012_137155048	0.810571	NKX3-2.p2	BC138692|Elf3|13710|E74-like factor 3	BC145380|Elf3|13710|E74-like factor 3	AF016294|Elf3|13710|E74-like factor 3	AK143135|Elf3|13710|E74-like factor 3	NM_001163131|Elf3|13710|E74-like factor 3	NM_007921|Elf3|13710|E74-like factor 3
mm9_v1_chr3_-_94863548_94863564	0.809965	NKX3-2.p2	AK052310|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr4_+_144482979_144483095	0.809297	NKX3-2.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr10_+_90292388_90292441	0.80915	NKX3-2.p2	AK032061|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr18_+_37925233_37925233	0.806287	NKX3-2.p2	BC056998|Pcdhga12|93724|protocadherin gamma subfamily A, 12	NM_033595|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr5_-_143668398_143668402	0.805507	NKX3-2.p2	AK075973|Actb|11461|actin, beta	AK088691|Actb|11461|actin, beta	AK147787|Actb|11461|actin, beta	AK150662|Actb|11461|actin, beta	AK150675|Actb|11461|actin, beta	AK151010|Actb|11461|actin, beta	AK151145|Actb|11461|actin, beta	AK151166|Actb|11461|actin, beta	AK151226|Actb|11461|actin, beta	AK151277|Actb|11461|actin, beta	AK151350|Actb|11461|actin, beta	AK151386|Actb|11461|actin, beta	AK151468|Actb|11461|actin, beta	AK151898|Actb|11461|actin, beta	AK151956|Actb|11461|actin, beta	AK152052|Actb|11461|actin, beta	AK152433|Actb|11461|actin, beta	AK152470|Actb|11461|actin, beta	AK152844|Actb|11461|actin, beta	AK153461|Actb|11461|actin, beta	AK159834|Actb|11461|actin, beta	AK160029|Actb|11461|actin, beta	X03672|Actb|11461|actin, beta	AK152043|Actb|11461|actin, beta	AK150854|Actb|11461|actin, beta	AK150866|Actb|11461|actin, beta	AK151712|Actb|11461|actin, beta	AK152591|Actb|11461|actin, beta	AK159759|Actb|11461|actin, beta	NM_007393|Actb|11461|actin, beta
mm9_v1_chr2_-_152240515_152240566	0.804413	NKX3-2.p2	AK053859|Zcchc3|67917|zinc finger, CCHC domain containing 3
mm9_v1_chr10_+_56097078_56097350	0.802656	NKX3-2.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chrM_+_11741_11742	0.801619	NKX3-2.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr14_+_120724163_120724175	0.800714	NKX3-2.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_+_83564607_83564841	0.800532	NKX3-2.p2	AK140647|Itgav|16410|integrin alpha V	AK080357|Itgav|16410|integrin alpha V	AK020674|Itgav|16410|integrin alpha V	AK149984|Itgav|16410|integrin alpha V	U14135|Itgav|16410|integrin alpha V	BC021600|Itgav|16410|integrin alpha V	BC133682|Itgav|16410|integrin alpha V
mm9_v1_chr11_-_103815291_103815312	0.79787	NKX3-2.p2	BC019167|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr5_-_21207158_21207169	0.795993	NKX3-2.p2	AK041194|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	AK080888|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	NM_178728|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D
mm9_v1_chr18_+_69753146_69753168	0.794137	NKX3-2.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr4_-_42679293_42679294	0.793352	NKX3-2.p2	NM_001099348|Gm13305|100042555|predicted gene 13305	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2
mm9_v1_chr11_-_95926384_95926408	0.793233	NKX3-2.p2	AK152529|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK153328|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr8_-_67373715_67373728	0.792348	NKX3-2.p2	BC031144|Klhl2|77113|kelch-like 2, Mayven (Drosophila)	NM_178633|Klhl2|77113|kelch-like 2, Mayven (Drosophila)
mm9_v1_chr15_+_97800138_97800260	0.79168	NKX3-2.p2	
mm9_v1_chr10_-_31165691_31165726	0.788298	NKX3-2.p2	AF004428|Tpd52l1|21987|tumor protein D52-like 1	NM_009413|Tpd52l1|21987|tumor protein D52-like 1
mm9_v1_chr8_-_95803605_95803656	0.788013	NKX3-2.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr17_+_27070275_27070404	0.787741	NKX3-2.p2	AB011550|Phf1|21652|PHD finger protein 1	AK133474|Phf1|21652|PHD finger protein 1	U81490|Phf1|21652|PHD finger protein 1	BC145595|Phf1|21652|PHD finger protein 1	BC145596|Phf1|21652|PHD finger protein 1	BC015077|Phf1|21652|PHD finger protein 1
mm9_v1_chr9_-_63869857_63869865	0.787467	NKX3-2.p2	AK046602|Smad6|17130|MAD homolog 6 (Drosophila)	NM_008542|Smad6|17130|MAD homolog 6 (Drosophila)
mm9_v1_chr4_+_43575487_43575594	0.786576	NKX3-2.p2	AK132785|Creb3|12913|cAMP responsive element binding protein 3	AK144208|Creb3|12913|cAMP responsive element binding protein 3	NM_013497|Creb3|12913|cAMP responsive element binding protein 3	AK090077|Creb3|12913|cAMP responsive element binding protein 3	BC002094|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr19_+_38911056_38911166	0.784939	NKX3-2.p2	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr15_-_76001440_76001538	0.78462	NKX3-2.p2	
mm9_v1_chr6_-_124691022_124691109	0.784317	NKX3-2.p2	AK009591|Grcc10|14790|gene rich cluster, C10 gene	BC005683|Grcc10|14790|gene rich cluster, C10 gene	AK013899|Grcc10|14790|gene rich cluster, C10 gene	NM_013535|Grcc10|14790|gene rich cluster, C10 gene
mm9_v1_chr3_+_104591955_104591985	0.782088	NKX3-2.p2	AK160650|Rhoc|11853|ras homolog gene family, member C	X80638|Rhoc|11853|ras homolog gene family, member C	BC004627|Rhoc|11853|ras homolog gene family, member C
mm9_v1_chr19_-_41068625_41068698	0.780574	NKX3-2.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr16_+_96422285_96422310	0.780214	NKX3-2.p2	AJ239082|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr11_-_96678887_96679011	0.777205	NKX3-2.p2	AK193504|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK201206|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr17_-_71339826_71339901	0.776692	NKX3-2.p2	BC099425|Myl12b|67938|myosin, light chain 12B, regulatory	BC131925|Myl12b|67938|myosin, light chain 12B, regulatory	BC131927|Myl12b|67938|myosin, light chain 12B, regulatory	BC028878|Myl12b|67938|myosin, light chain 12B, regulatory	AK002885|Myl12b|67938|myosin, light chain 12B, regulatory	AK168316|Myl12b|67938|myosin, light chain 12B, regulatory	NM_023402|Myl12b|67938|myosin, light chain 12B, regulatory	AK146115|Myl12b|67938|myosin, light chain 12B, regulatory	AK005133|Myl12b|67938|myosin, light chain 12B, regulatory	AK160123|Myl12b|67938|myosin, light chain 12B, regulatory
mm9_v1_chr9_+_32031833_32031859	0.776113	NKX3-2.p2	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr2_+_163332550_163332692	0.774221	NKX3-2.p2	AF015275|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608819|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608820|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608821|Hnf4a|15378|hepatic nuclear factor 4, alpha	EF193391|Hnf4a|15378|hepatic nuclear factor 4, alpha
mm9_v1_chr12_+_75385267_75385319	0.772794	NKX3-2.p2	AK007020|1700086L19Rik|74284|RIKEN cDNA 1700086L19 gene
mm9_v1_chr6_-_125263750_125263903	0.772098	NKX3-2.p2	BC138590|Ltbr|17000|lymphotoxin B receptor	BC138591|Ltbr|17000|lymphotoxin B receptor	AK146127|Ltbr|17000|lymphotoxin B receptor	L38423|Ltbr|17000|lymphotoxin B receptor	U29173|Ltbr|17000|lymphotoxin B receptor	NM_010736|Ltbr|17000|lymphotoxin B receptor
mm9_v1_chrX_+_20281028_20281089	0.771542	NKX3-2.p2	NM_145628|Usp11|236733|ubiquitin specific peptidase 11	AK031767|Usp11|236733|ubiquitin specific peptidase 11	AK166523|Usp11|236733|ubiquitin specific peptidase 11	AK049053|Usp11|236733|ubiquitin specific peptidase 11
mm9_v1_chr15_+_99223377_99223451	0.77029	NKX3-2.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr8_-_48437701_48437701	0.767543	NKX3-2.p2	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chr14_-_104213981_104213985	0.766504	NKX3-2.p2	
mm9_v1_chr3_-_143865162_143865359	0.765854	NKX3-2.p2	BC003488|Lmo4|16911|LIM domain only 4	BC100382|Lmo4|16911|LIM domain only 4	AF102817|Lmo4|16911|LIM domain only 4	AK138278|Lmo4|16911|LIM domain only 4	NM_001161770|Lmo4|16911|LIM domain only 4	NM_001161769|Lmo4|16911|LIM domain only 4
mm9_v1_chr2_+_16277963_16277989	0.765468	NKX3-2.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr9_-_8004450_8004510	0.765429	NKX3-2.p2	BC039125|Yap1|22601|yes-associated protein 1	AK198743|Yap1|22601|yes-associated protein 1
mm9_v1_chr11_-_119960005_119960044	0.765262	NKX3-2.p2	AK154660|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	AK019105|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC137580|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC144724|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	NM_183137|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene
mm9_v1_chr12_+_9581218_9581247	0.765197	NKX3-2.p2	NM_011859|Osr1|23967|odd-skipped related 1 (Drosophila)
mm9_v1_chr7_+_35904310_35904321	0.764837	NKX3-2.p2	NM_007678|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC011118|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC028890|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC051102|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC058161|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chr2_+_90780665_90780699	0.764427	NKX3-2.p2	BC021393|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr6_-_115201846_115201865	0.763781	NKX3-2.p2	BC064046|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK038820|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK040814|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr7_+_96781228_96781259	0.763098	NKX3-2.p2	BC099935|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial
mm9_v1_chr11_+_49607656_49607690	0.762269	NKX3-2.p2	NM_013529|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	AK053670|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	BC031928|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2	AB016780|Gfpt2|14584|glutamine fructose-6-phosphate transaminase 2
mm9_v1_chr13_-_69138418_69138432	0.762056	NKX3-2.p2	AK132312|Adcy2|210044|adenylate cyclase 2	NM_153534|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr19_-_5510453_5510506	0.761869	NKX3-2.p2	AK047234|Snx32|225861|sorting nexin 32	BC048922|Snx32|225861|sorting nexin 32	NM_001024560|Snx32|225861|sorting nexin 32	AK037118|Snx32|225861|sorting nexin 32	AK143441|Snx32|225861|sorting nexin 32
mm9_v1_chr1_-_42751652_42751673	0.75924	NKX3-2.p2	BC094545|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK011437|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK019154|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK048630|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr11_+_97888023_97888023	0.759	NKX3-2.p2	NM_001159483|Rpl19|19921|ribosomal protein L19
mm9_v1_chr2_+_72018059_72018093	0.757828	NKX3-2.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr8_-_87542451_87542752	0.757547	NKX3-2.p2	AK212827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK183718|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK193379|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK180403|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK205686|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK216431|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr2_+_163245523_163245600	0.757137	NKX3-2.p2	AK013849|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene	AK020931|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene
mm9_v1_chr2_+_135883963_135884022	0.756957	NKX3-2.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr16_-_8672242_8672250	0.756665	NKX3-2.p2	AK170411|Carhsp1|52502|calcium regulated heat stable protein 1	AK002853|Carhsp1|52502|calcium regulated heat stable protein 1	AK004711|Carhsp1|52502|calcium regulated heat stable protein 1	AK143612|Carhsp1|52502|calcium regulated heat stable protein 1	AK154460|Carhsp1|52502|calcium regulated heat stable protein 1	AK168504|Carhsp1|52502|calcium regulated heat stable protein 1	NM_025821|Carhsp1|52502|calcium regulated heat stable protein 1	AK003926|Carhsp1|52502|calcium regulated heat stable protein 1	AK149875|Carhsp1|52502|calcium regulated heat stable protein 1	AK155318|Carhsp1|52502|calcium regulated heat stable protein 1	AK158112|Carhsp1|52502|calcium regulated heat stable protein 1	AK158252|Carhsp1|52502|calcium regulated heat stable protein 1	AK165373|Carhsp1|52502|calcium regulated heat stable protein 1	AK171282|Carhsp1|52502|calcium regulated heat stable protein 1
mm9_v1_chr14_-_55735114_55735220	0.756216	NKX3-2.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr15_+_68758773_68758908	0.755431	NKX3-2.p2	AF079763|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AF099092|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	NM_010158|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AK014353|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	BC057577|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3
mm9_v1_chr9_-_45012097_45012172	0.752697	NKX3-2.p2	BC021368|Tmprss4|214523|transmembrane protease, serine 4	AY043240|Tmprss4|214523|transmembrane protease, serine 4	NM_145403|Tmprss4|214523|transmembrane protease, serine 4	AK078890|Tmprss4|214523|transmembrane protease, serine 4
mm9_v1_chr11_+_97888237_97888268	0.75106	NKX3-2.p2	NM_009078|Rpl19|19921|ribosomal protein L19	AK168232|Rpl19|19921|ribosomal protein L19	AK168481|Rpl19|19921|ribosomal protein L19
mm9_v1_chr7_-_51809255_51809350	0.748376	NKX3-2.p2	AK134489|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	BC066025|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	NM_009473|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK077620|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK156777|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK054508|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chr15_+_102865094_102865153	0.747263	NKX3-2.p2	D11329|Hoxc4|15423|homeobox C4	AB221549|Hoxc4|15423|homeobox C4
mm9_v1_chr13_+_105607262_105607338	0.746143	NKX3-2.p2	BC038302|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK018357|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK020113|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013737|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK014102|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013429|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC096661|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	NM_026075|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC027133|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116993|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116999|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
mm9_v1_chr4_-_155043283_155043335	0.745131	NKX3-2.p2	AK147940|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK081738|Mib2|76580|mindbomb homolog 2 (Drosophila)	NM_145124|Mib2|76580|mindbomb homolog 2 (Drosophila)
mm9_v1_chr17_+_80689536_80689571	0.745019	NKX3-2.p2	AY367765|Morn2|378462|MORN repeat containing 2	NM_194269|Morn2|378462|MORN repeat containing 2	BC037365|Morn2|378462|MORN repeat containing 2
mm9_v1_chr12_+_105576693_105576718	0.744043	NKX3-2.p2	AK149436|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	NM_011458|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	AK004842|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC016407|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	X56786|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	X55147|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	D00725|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC011217|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC019802|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K
mm9_v1_chr12_+_78340039_78340051	0.743954	NKX3-2.p2	AK134537|Fut8|53618|fucosyltransferase 8
mm9_v1_chr2_-_152655725_152655826	0.743603	NKX3-2.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr7_+_4874178_4874216	0.742753	NKX3-2.p2	AK078272|Nat14|269854|N-acetyltransferase 14	BC047219|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr2_+_79475581_79475821	0.742386	NKX3-2.p2	AK169543|Ssfa2|70599|sperm specific antigen 2	NM_080558|Ssfa2|70599|sperm specific antigen 2	AB120565|Ssfa2|70599|sperm specific antigen 2	BC141883|Ssfa2|70599|sperm specific antigen 2	BC115799|Ssfa2|70599|sperm specific antigen 2	BC122519|Ssfa2|70599|sperm specific antigen 2	AB093303|Ssfa2|70599|sperm specific antigen 2
mm9_v1_chr1_-_63223345_63223399	0.741893	NKX3-2.p2	NM_001160038|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160039|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160040|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_145518|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr10_+_79578561_79578596	0.74168	NKX3-2.p2	AK172528|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr8_-_67373807_67373950	0.741659	NKX3-2.p2	AK220570|Klhl2|77113|kelch-like 2, Mayven (Drosophila)
mm9_v1_chr8_-_120197535_120197551	0.740691	NKX3-2.p2	BC038819|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1
mm9_v1_chr3_+_32428382_32428415	0.74017	NKX3-2.p2	AK141611|Mfn1|67414|mitofusin 1	NM_024200|Mfn1|67414|mitofusin 1	AK018181|Mfn1|67414|mitofusin 1	AK220169|Mfn1|67414|mitofusin 1
mm9_v1_chr6_+_145159653_145159723	0.739969	NKX3-2.p2	NM_001163628|Lyrm5|67636|LYR motif containing 5	AF412300|Lyrm5|67636|LYR motif containing 5	NM_133688|Lyrm5|67636|LYR motif containing 5	AY753325|Lyrm5|67636|LYR motif containing 5	AF412298|Lyrm5|67636|LYR motif containing 5	AK075835|Lyrm5|67636|LYR motif containing 5	AF412299|Lyrm5|67636|LYR motif containing 5	AK015530|Lyrm5|67636|LYR motif containing 5	AK046179|Lyrm5|67636|LYR motif containing 5	BC021522|Lyrm5|67636|LYR motif containing 5
mm9_v1_chr4_-_40995030_40995168	0.739756	NKX3-2.p2	AB010100|Aqp7|11832|aquaporin 7	AK076642|Aqp7|11832|aquaporin 7	AK131744|Aqp7|11832|aquaporin 7	NM_007473|Aqp7|11832|aquaporin 7
mm9_v1_chr5_+_137994744_137994862	0.738592	NKX3-2.p2	BC049539|Actl6b|83766|actin-like 6B	NM_031404|Actl6b|83766|actin-like 6B	AB075226|Actl6b|83766|actin-like 6B
mm9_v1_chr19_+_34682418_34682459	0.738477	NKX3-2.p2	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chr3_+_89222501_89222609	0.737836	NKX3-2.p2	AK049357|Shc1|20416|src homology 2 domain-containing transforming protein C1	BC036172|Shc1|20416|src homology 2 domain-containing transforming protein C1	U15784|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr11_+_104411976_104411976	0.737528	NKX3-2.p2	BC048485|Myl4|17896|myosin, light polypeptide 4	NM_010858|Myl4|17896|myosin, light polypeptide 4
mm9_v1_chr10_-_36855292_36855411	0.737096	NKX3-2.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr3_-_108248113_108248159	0.735766	NKX3-2.p2	AK028154|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK153158|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK152150|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr7_+_148748114_148748190	0.735111	NKX3-2.p2	AK170980|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK128972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	BC058099|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK173054|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK088500|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK152463|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr3_+_129235284_129235325	0.730871	NKX3-2.p2	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chrX_-_45245608_45245760	0.730136	NKX3-2.p2	AK035068|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK030741|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK032978|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK052092|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC016071|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AF325920|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC057115|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	NM_053123|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
mm9_v1_chr4_+_139178924_139178962	0.729272	NKX3-2.p2	BC056226|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr14_-_57752270_57752447	0.728599	NKX3-2.p2	NM_001010937|Gjb6|14623|gap junction protein, beta 6	AK134617|Gjb6|14623|gap junction protein, beta 6	AK141610|Gjb6|14623|gap junction protein, beta 6
mm9_v1_chr1_-_134638361_134638397	0.728341	NKX3-2.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr5_+_114830841_114830887	0.727357	NKX3-2.p2	BC023956|Ube3b|117146|ubiquitin protein ligase E3B
mm9_v1_chrX_+_20127488_20127626	0.726497	NKX3-2.p2	D86217|Rgn|19733|regucalcin
mm9_v1_chr8_-_67373608_67373666	0.725548	NKX3-2.p2	AK167903|Klhl2|77113|kelch-like 2, Mayven (Drosophila)
mm9_v1_chr14_+_66285263_66285346	0.725086	NKX3-2.p2	BC016096|Scara5|71145|scavenger receptor class A, member 5 (putative)	AK016912|Scara5|71145|scavenger receptor class A, member 5 (putative)	AK033154|Scara5|71145|scavenger receptor class A, member 5 (putative)	BC032159|Scara5|71145|scavenger receptor class A, member 5 (putative)	BC023907|Scara5|71145|scavenger receptor class A, member 5 (putative)
mm9_v1_chr2_-_62321694_62321709	0.723297	NKX3-2.p2	BC012975|Gcg|14526|glucagon	AK007911|Gcg|14526|glucagon	AK148544|Gcg|14526|glucagon	AF276754|Gcg|14526|glucagon	NM_008100|Gcg|14526|glucagon
mm9_v1_chr6_+_41471774_41471798	0.722117	NKX3-2.p2	NM_009430|Prss2|22072|protease, serine, 2	AK003082|Prss2|22072|protease, serine, 2	X04574|Prss2|22072|protease, serine, 2	BC064796|Prss2|22072|protease, serine, 2
mm9_v1_chr4_+_86221626_86221649	0.721395	NKX3-2.p2	AK144591|Rraga|68441|Ras-related GTP binding A
mm9_v1_chr5_-_144984391_144984416	0.721008	NKX3-2.p2	AK169888|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK170108|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AB093295|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr1_+_57831651_57831771	0.720897	NKX3-2.p2	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr6_+_41342352_41342354	0.720696	NKX3-2.p2	BC132026|Gm5771|436523|predicted gene 5771	BC132030|Gm5771|436523|predicted gene 5771	NM_001038997|Gm5771|436523|predicted gene 5771
mm9_v1_chr10_-_105011265_105011266	0.720132	NKX3-2.p2	BC138362|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	BC138363|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr2_+_61884596_61884650	0.717333	NKX3-2.p2	AK043017|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	NM_033552|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AK220501|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	HM149278|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	BC039226|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AB033759|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm9_v1_chr9_-_123587923_123587963	0.716463	NKX3-2.p2	AJ964961|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	BC118933|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	NM_139142|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK160468|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK043297|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK080979|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK140445|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AJ428067|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A
mm9_v1_chr11_-_103815317_103815332	0.715874	NKX3-2.p2	AK085086|Nsf|18195|N-ethylmaleimide sensitive fusion protein	U10120|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr9_+_21397165_21397375	0.714913	NKX3-2.p2	BC057071|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	NM_178619|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK030602|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK028799|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr7_+_135667095_135667183	0.714482	NKX3-2.p2	NM_013863|Bag3|29810|BCL2-associated athanogene 3	AB041583|Bag3|29810|BCL2-associated athanogene 3	AK171734|Bag3|29810|BCL2-associated athanogene 3	BC145765|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr12_+_83271002_83271165	0.713378	NKX3-2.p2	NM_001167983|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	BC058681|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	AK171876|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr9_-_114753191_114753285	0.712607	NKX3-2.p2	BC027554|Cmtm8|70031|CKLF-like MARVEL transmembrane domain containing 8	AK012262|Cmtm8|70031|CKLF-like MARVEL transmembrane domain containing 8	NM_027294|Cmtm8|70031|CKLF-like MARVEL transmembrane domain containing 8	AK137729|Cmtm8|70031|CKLF-like MARVEL transmembrane domain containing 8	AK161079|Cmtm8|70031|CKLF-like MARVEL transmembrane domain containing 8
mm9_v1_chr1_+_193541845_193542002	0.709123	NKX3-2.p2	AK133814|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	NM_172266|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr5_+_91946651_91946764	0.708049	NKX3-2.p2	AK148300|Parm1|231440|prostate androgen-regulated mucin-like protein 1	AK078943|Parm1|231440|prostate androgen-regulated mucin-like protein 1	BC006604|Parm1|231440|prostate androgen-regulated mucin-like protein 1	NM_145562|Parm1|231440|prostate androgen-regulated mucin-like protein 1	AK167402|Parm1|231440|prostate androgen-regulated mucin-like protein 1	AK161172|Parm1|231440|prostate androgen-regulated mucin-like protein 1	AK078862|Parm1|231440|prostate androgen-regulated mucin-like protein 1
mm9_v1_chr3_+_95086814_95087156	0.708029	NKX3-2.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr14_-_31981804_31981826	0.704267	NKX3-2.p2	NM_138672|Stab1|192187|stabilin 1
mm9_v1_chr16_-_91597886_91597995	0.704236	NKX3-2.p2	AK098154|Tmem50b|77975|transmembrane protein 50B	AK150773|Tmem50b|77975|transmembrane protein 50B	AK172335|Tmem50b|77975|transmembrane protein 50B	AK170684|Tmem50b|77975|transmembrane protein 50B	BC004841|Tmem50b|77975|transmembrane protein 50B	NM_030018|Tmem50b|77975|transmembrane protein 50B	AK020977|Tmem50b|77975|transmembrane protein 50B	AK152190|Tmem50b|77975|transmembrane protein 50B	AK152767|Tmem50b|77975|transmembrane protein 50B	AK133966|Tmem50b|77975|transmembrane protein 50B	AK151796|Tmem50b|77975|transmembrane protein 50B	AK155082|Tmem50b|77975|transmembrane protein 50B
mm9_v1_chr4_-_41222121_41222174	0.703098	NKX3-2.p2	BC007179|Ubap2|68926|ubiquitin-associated protein 2	NM_026872|Ubap2|68926|ubiquitin-associated protein 2
mm9_v1_chr9_+_64025147_64025147	0.702636	NKX3-2.p2	AJ844648|Rpl4|67891|ribosomal protein L4
mm9_v1_chr3_-_105746740_105746751	0.702248	NKX3-2.p2	AK215505|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr14_+_25309955_25309963	0.701091	NKX3-2.p2	BC081457|Rps24|20088|ribosomal protein S24	BC091748|Rps24|20088|ribosomal protein S24	X60289|Rps24|20088|ribosomal protein S24
mm9_v1_chr2_+_164312376_164312376	0.700286	NKX3-2.p2	AK003735|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048228|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr16_+_7069927_7069947	0.69977	NKX3-2.p2	AF191501|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_183188|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr11_-_118280266_118280405	0.699161	NKX3-2.p2	AK006565|Cant1|76025|calcium activated nucleotidase 1	AK166384|Cant1|76025|calcium activated nucleotidase 1	AK081118|Cant1|76025|calcium activated nucleotidase 1	AK017942|Cant1|76025|calcium activated nucleotidase 1	AK049879|Cant1|76025|calcium activated nucleotidase 1	NM_001025617|Cant1|76025|calcium activated nucleotidase 1	NM_001025618|Cant1|76025|calcium activated nucleotidase 1	NM_029502|Cant1|76025|calcium activated nucleotidase 1	AK085059|Cant1|76025|calcium activated nucleotidase 1
mm9_v1_chr3_+_104667380_104667423	0.698407	NKX3-2.p2	AK172102|St7l|229681|suppression of tumorigenicity 7-like	AK172218|St7l|229681|suppression of tumorigenicity 7-like
mm9_v1_chr13_-_54788995_54789018	0.697709	NKX3-2.p2	AK160090|Rnf44|105239|ring finger protein 44	AK160115|Rnf44|105239|ring finger protein 44
mm9_v1_chr8_-_128093602_128093782	0.697578	NKX3-2.p2	AK132916|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2	BC072593|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2
mm9_v1_chrX_-_49034778_49034778	0.696927	NKX3-2.p2	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr7_-_116760660_116760660	0.696095	NKX3-2.p2	NM_001001326|St5|76954|suppression of tumorigenicity 5	NM_029811|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr15_-_91022165_91022189	0.695435	NKX3-2.p2	BC019187|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr6_-_87995010_87995181	0.695009	NKX3-2.p2	AK158971|Rab7|19349|RAB7, member RAS oncogene family	AK179526|Rab7|19349|RAB7, member RAS oncogene family	AK190348|Rab7|19349|RAB7, member RAS oncogene family	AK197221|Rab7|19349|RAB7, member RAS oncogene family	AK203105|Rab7|19349|RAB7, member RAS oncogene family	AK159928|Rab7|19349|RAB7, member RAS oncogene family	BC086793|Rab7|19349|RAB7, member RAS oncogene family	BC004597|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chr8_-_37631532_37631612	0.694946	NKX3-2.p2	BC096052|Dlc1|50768|deleted in liver cancer 1	BC028562|Dlc1|50768|deleted in liver cancer 1	BC056230|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr2_+_49921978_49921983	0.694736	NKX3-2.p2	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr11_+_114536748_114536848	0.693676	NKX3-2.p2	AK154835|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK155166|Ttyh2|117160|tweety homolog 2 (Drosophila)	NM_053273|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK168408|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK152172|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK156393|Ttyh2|117160|tweety homolog 2 (Drosophila)	AF329682|Ttyh2|117160|tweety homolog 2 (Drosophila)	BC060740|Ttyh2|117160|tweety homolog 2 (Drosophila)
mm9_v1_chr11_-_65601774_65601862	0.693165	NKX3-2.p2	AK139777|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044534|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044698|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK036928|Map2k4|26398|mitogen-activated protein kinase kinase 4	NM_009157|Map2k4|26398|mitogen-activated protein kinase kinase 4
mm9_v1_chr11_-_96777696_96777844	0.693147	NKX3-2.p2	AK153951|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK077853|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	BC002318|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	NM_030248|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075791|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK165494|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075771|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK050014|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK149765|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK166476|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3
mm9_v1_chr7_-_4474044_4474047	0.692712	NKX3-2.p2	AK169223|Tnni3|21954|troponin I, cardiac 3	BC061171|Tnni3|21954|troponin I, cardiac 3	NM_009406|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chr19_+_55390850_55390853	0.691291	NKX3-2.p2	AK004751|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chr1_+_78654399_78654472	0.689273	NKX3-2.p2	AK161708|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001001981|Utp14b|195434|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	NM_001033606|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001136222|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_028817|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK012088|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK160839|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK166723|Acsl3|74205|acyl-CoA synthetase long-chain family member 3
mm9_v1_chr1_+_174271397_174271531	0.68799	NKX3-2.p2	BC099932|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AK044640|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AB039879|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	BC141088|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AF322631|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr10_+_127472725_127472748	0.686746	NKX3-2.p2	U22151|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC099375|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr2_+_57090707_57090899	0.685109	NKX3-2.p2	BC021359|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_010274|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK167152|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	U60987|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK034353|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK151189|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	D50430|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr1_-_165242744_165242943	0.684586	NKX3-2.p2	AK031075|Prrx1|18933|paired related homeobox 1	AB221686|Prrx1|18933|paired related homeobox 1	X59725|Prrx1|18933|paired related homeobox 1	L06502|Prrx1|18933|paired related homeobox 1
mm9_v1_chr16_-_35490849_35490973	0.680688	NKX3-2.p2	BC009151|Pdia5|72599|protein disulfide isomerase associated 5	NM_028295|Pdia5|72599|protein disulfide isomerase associated 5
mm9_v1_chr2_+_90780626_90780644	0.680062	NKX3-2.p2	AK014492|Celf1|13046|CUGBP, Elav-like family member 1	AK156725|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr6_-_115625875_115625915	0.679892	NKX3-2.p2	AB057663|Raf1|110157|v-raf-leukemia viral oncogene 1	AB077145|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr12_-_81744771_81744855	0.679452	NKX3-2.p2	BC107315|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC107316|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132421|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132423|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U66870|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC099476|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U01140|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC083141|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK171834|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK010451|Erh|13877|enhancer of rudimentary homolog (Drosophila)	D73368|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK168188|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK080617|Erh|13877|enhancer of rudimentary homolog (Drosophila)	NM_007951|Erh|13877|enhancer of rudimentary homolog (Drosophila)
mm9_v1_chr17_+_36974084_36974137	0.679372	NKX3-2.p2	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr7_+_29618812_29619148	0.67882	NKX3-2.p2	EF017938|Lgals4|16855|lectin, galactose binding, soluble 4	EF017939|Lgals4|16855|lectin, galactose binding, soluble 4	EF017942|Lgals6|16857|lectin, galactose binding, soluble 6	AK145734|Lgals4|16855|lectin, galactose binding, soluble 4	BC030297|Lgals4|16855|lectin, galactose binding, soluble 4	NM_010706|Lgals4|16855|lectin, galactose binding, soluble 4	BC141106|Lgals4|16855|lectin, galactose binding, soluble 4	BC145387|Lgals4|16855|lectin, galactose binding, soluble 4	AY044870|Lgals4|16855|lectin, galactose binding, soluble 4
mm9_v1_chr7_+_148748077_148748100	0.678417	NKX3-2.p2	NM_007459|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr4_+_8534378_8534506	0.676508	NKX3-2.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr18_+_74375861_74375888	0.676149	NKX3-2.p2	AK083655|Cxxc1|74322|CXXC finger 1 (PHD domain)	NM_028868|Cxxc1|74322|CXXC finger 1 (PHD domain)	AK010337|Cxxc1|74322|CXXC finger 1 (PHD domain)	AY099096|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr11_-_3271367_3271408	0.676077	NKX3-2.p2	AB005132|Limk2|16886|LIM motif-containing protein kinase 2	NM_173053|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr5_-_21207184_21207211	0.674728	NKX3-2.p2	BC062890|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	AK049135|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	AK141585|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D
mm9_v1_chr18_+_60963495_60963509	0.67438	NKX3-2.p2	AK002232|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	AK020607|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_001042605|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_010545|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC003476|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC096435|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	X07129|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm9_v1_chr7_+_97535490_97535508	0.674085	NKX3-2.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr14_+_32031041_32031060	0.673458	NKX3-2.p2	AK129018|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	AK137463|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	AB127607|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	NM_001025379|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	BC115440|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
mm9_v1_chr6_-_124779408_124779497	0.673209	NKX3-2.p2	AK186740|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	BC066993|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	AK154008|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	NM_013700|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)
mm9_v1_chr11_+_94808758_94808772	0.671943	NKX3-2.p2	BC003198|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr15_-_101966611_101966682	0.6718	NKX3-2.p2	BC048820|Spryd3|223918|SPRY domain containing 3	NM_001033277|Spryd3|223918|SPRY domain containing 3	AK146689|Spryd3|223918|SPRY domain containing 3
mm9_v1_chr3_+_131227854_131227883	0.67026	NKX3-2.p2	U34883|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK146507|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK168982|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK169117|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK169204|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK153296|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1	AK169124|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm9_v1_chr3_-_29911982_29912077	0.670007	NKX3-2.p2	AK051098|Mecom|14013|MDS1 and EVI1 complex locus	BC076620|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr1_-_170361525_170361683	0.669672	NKX3-2.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr8_-_11478364_11478498	0.669655	NKX3-2.p2	AK217678|Rab20|19332|RAB20, member RAS oncogene family	AB232614|Rab20|19332|RAB20, member RAS oncogene family	M79310|Rab20|19332|RAB20, member RAS oncogene family	NM_011227|Rab20|19332|RAB20, member RAS oncogene family	X80332|Rab20|19332|RAB20, member RAS oncogene family
mm9_v1_chr1_+_59821480_59821480	0.668079	NKX3-2.p2	NM_007561|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)	U78048|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)
mm9_v1_chr2_+_90780646_90780662	0.667688	NKX3-2.p2	AK143698|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr11_-_3439172_3439299	0.665998	NKX3-2.p2	BC066192|Smtn|29856|smoothelin	BC069836|Smtn|29856|smoothelin	BC069839|Smtn|29856|smoothelin	BC010599|Smtn|29856|smoothelin	AF064236|Smtn|29856|smoothelin	AJ010305|Smtn|29856|smoothelin	AK166385|Smtn|29856|smoothelin	AK170516|Smtn|29856|smoothelin	AK085412|Smtn|29856|smoothelin	AK030932|Smtn|29856|smoothelin	AK138898|Smtn|29856|smoothelin	NM_001159284|Smtn|29856|smoothelin	NM_013870|Smtn|29856|smoothelin
mm9_v1_chr3_-_75073981_75073999	0.665088	NKX3-2.p2	AF251276|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK007347|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK008931|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	NM_026460|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm9_v1_chr1_+_94728419_94728433	0.66462	NKX3-2.p2	BC062902|Gpc1|14733|glypican 1
mm9_v1_chr17_+_35272688_35272836	0.664368	NKX3-2.p2	AK164266|Bag6|224727|BCL2-associated athanogene 6	AK170134|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr4_-_126430511_126430686	0.664019	NKX3-2.p2	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr9_+_20986009_20986074	0.663245	NKX3-2.p2	BC044786|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr7_-_35015309_35015367	0.663063	NKX3-2.p2	AK147124|Gpi1|14751|glucose phosphate isomerase 1	NM_008155|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr11_-_83406475_83406588	0.661813	NKX3-2.p2	BC002073|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128188|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128189|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128190|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128191|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128192|Ccl6|20305|chemokine (C-C motif) ligand 6	AK002697|Ccl6|20305|chemokine (C-C motif) ligand 6	AK008547|Ccl6|20305|chemokine (C-C motif) ligand 6	AK150336|Ccl6|20305|chemokine (C-C motif) ligand 6	M58004|Ccl6|20305|chemokine (C-C motif) ligand 6	AK154553|Ccl6|20305|chemokine (C-C motif) ligand 6	NM_009139|Ccl6|20305|chemokine (C-C motif) ligand 6
mm9_v1_chr11_+_52045464_52045596	0.661589	NKX3-2.p2	NM_011543|Skp1a|21402|S-phase kinase-associated protein 1A	AK078330|Skp1a|21402|S-phase kinase-associated protein 1A	AK002983|Skp1a|21402|S-phase kinase-associated protein 1A	AK012498|Skp1a|21402|S-phase kinase-associated protein 1A	AK014245|Skp1a|21402|S-phase kinase-associated protein 1A	AK027909|Skp1a|21402|S-phase kinase-associated protein 1A	AK088339|Skp1a|21402|S-phase kinase-associated protein 1A	AK160198|Skp1a|21402|S-phase kinase-associated protein 1A	AK158209|Skp1a|21402|S-phase kinase-associated protein 1A	AK166673|Skp1a|21402|S-phase kinase-associated protein 1A	AK152609|Skp1a|21402|S-phase kinase-associated protein 1A	Z47088|Skp1a|21402|S-phase kinase-associated protein 1A	BC002115|Skp1a|21402|S-phase kinase-associated protein 1A	AF083214|Skp1a|21402|S-phase kinase-associated protein 1A
mm9_v1_chr13_+_63402580_63402599	0.659702	NKX3-2.p2	AK081363|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AK082032|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC027288|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr1_-_167564449_167564681	0.659229	NKX3-2.p2	AK192253|Mpzl1|68481|myelin protein zero-like 1	AK192408|Mpzl1|68481|myelin protein zero-like 1	AK193736|Mpzl1|68481|myelin protein zero-like 1	AK197743|Mpzl1|68481|myelin protein zero-like 1	AY764248|Mpzl1|68481|myelin protein zero-like 1	BC072563|Mpzl1|68481|myelin protein zero-like 1	AK090278|Mpzl1|68481|myelin protein zero-like 1	AK169385|Mpzl1|68481|myelin protein zero-like 1	AY764247|Mpzl1|68481|myelin protein zero-like 1	NM_001001880|Mpzl1|68481|myelin protein zero-like 1	NM_001083897|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr8_+_97197548_97197604	0.658386	NKX3-2.p2	AK209782|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chrX_+_132373572_132373652	0.658249	NKX3-2.p2	NM_001163015|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163016|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163017|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK030638|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK081764|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117924|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117923|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2
mm9_v1_chr13_+_34967479_34967496	0.658057	NKX3-2.p2	AK021274|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AK083926|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AK020579|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm9_v1_chr17_+_26793311_26793343	0.657472	NKX3-2.p2	
mm9_v1_chr15_+_102864825_102864872	0.653758	NKX3-2.p2	NM_013553|Hoxc4|15423|homeobox C4	X69019|Hoxc4|15423|homeobox C4	BC144778|Hoxc4|15423|homeobox C4	BC150664|Hoxc4|15423|homeobox C4
mm9_v1_chr18_+_63112372_63112770	0.652992	NKX3-2.p2	AK190259|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191643|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191811|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191857|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK192996|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK198042|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK214514|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AB023957|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	BC065780|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1
mm9_v1_chr9_+_111341538_111341596	0.65049	NKX3-2.p2	NM_172928|Dclk3|245038|doublecortin-like kinase 3	AK135010|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr1_+_12708582_12708625	0.64989	NKX3-2.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr19_-_7457315_7457483	0.649318	NKX3-2.p2	AK163590|AI846148|68229|expressed sequence AI846148	BC125249|AI846148|68229|expressed sequence AI846148	AK168010|AI846148|68229|expressed sequence AI846148	AK166227|AI846148|68229|expressed sequence AI846148	AK090385|AI846148|68229|expressed sequence AI846148
mm9_v1_chr19_-_10752469_10752560	0.649156	NKX3-2.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chr11_-_103815361_103815405	0.64905	NKX3-2.p2	BC006627|Nsf|18195|N-ethylmaleimide sensitive fusion protein	NM_008740|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr15_-_98638348_98638375	0.648985	NKX3-2.p2	AK158894|Ddn|13199|dendrin	NM_001013741|Ddn|13199|dendrin
mm9_v1_chr15_+_97794629_97794751	0.648469	NKX3-2.p2	AK134684|Tmem106c|380967|transmembrane protein 106C	BC046621|Tmem106c|380967|transmembrane protein 106C	NM_201359|Tmem106c|380967|transmembrane protein 106C
mm9_v1_chr16_-_8672226_8672229	0.648294	NKX3-2.p2	AK150245|Carhsp1|52502|calcium regulated heat stable protein 1	BC086754|Carhsp1|52502|calcium regulated heat stable protein 1
mm9_v1_chr18_+_25224729_25224737	0.647446	NKX3-2.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr19_-_7180162_7180222	0.647266	NKX3-2.p2	AY495668|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	AK031503|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	NM_201411|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	BC070403|Flrt1|396184|fibronectin leucine rich transmembrane protein 1
mm9_v1_chr16_+_21204820_21205008	0.646611	NKX3-2.p2	AK144414|Ephb3|13845|Eph receptor B3	BC014822|Ephb3|13845|Eph receptor B3	BC053085|Ephb3|13845|Eph receptor B3	NM_010143|Ephb3|13845|Eph receptor B3	Z49086|Ephb3|13845|Eph receptor B3
mm9_v1_chr4_+_140522412_140522429	0.646328	NKX3-2.p2	DQ403000|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
mm9_v1_chr10_+_79240035_79240045	0.645827	NKX3-2.p2	AK087247|Fstl3|83554|follistatin-like 3	AF276238|Fstl3|83554|follistatin-like 3	AB024429|Fstl3|83554|follistatin-like 3	AF310616|Fstl3|83554|follistatin-like 3
mm9_v1_chrX_-_35793335_35793510	0.645071	NKX3-2.p2	AK184164|Lamp2|16784|lysosomal-associated membrane protein 2	AK217258|Lamp2|16784|lysosomal-associated membrane protein 2	AK128946|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr4_-_57156022_57156027	0.644469	NKX3-2.p2	AK144315|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b	NM_019427|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr1_-_172040621_172040689	0.643797	NKX3-2.p2	BC138826|Ddr2|18214|discoidin domain receptor family, member 2	BC138827|Ddr2|18214|discoidin domain receptor family, member 2	X76505|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr4_+_42965965_42965965	0.643616	NKX3-2.p2	BC057087|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	NM_019874|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr13_-_108680257_108680267	0.642972	NKX3-2.p2	NM_145456|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr19_-_46119635_46119713	0.64214	NKX3-2.p2	NM_001113408|Ldb1|16825|LIM domain binding 1
mm9_v1_chr19_-_7066983_7067014	0.640423	NKX3-2.p2	BC049281|Dnajc4|57431|DnaJ (Hsp40) homolog, subfamily C, member 4	AK170008|Dnajc4|57431|DnaJ (Hsp40) homolog, subfamily C, member 4	AK008507|Dnajc4|57431|DnaJ (Hsp40) homolog, subfamily C, member 4
mm9_v1_chr7_-_126138572_126138593	0.640047	NKX3-2.p2	AK032047|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr4_+_139179011_139179044	0.637596	NKX3-2.p2	AK044712|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	BC039281|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr19_-_6982516_6982562	0.636573	NKX3-2.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr7_+_30023324_30023364	0.63631	NKX3-2.p2	NM_001110201|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	NM_029887|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	BC109331|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	AK135529|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr19_-_10599581_10599698	0.635328	NKX3-2.p2	BC048913|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC038924|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC085277|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK013454|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK075594|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK160957|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK167228|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC058955|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC060090|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	NM_025333|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2
mm9_v1_chr11_-_106576550_106576578	0.635139	NKX3-2.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr6_-_42643001_42643085	0.635094	NKX3-2.p2	AK076242|Fam115a|77574|family with sequence similarity 115, member A	AK013025|Fam115a|77574|family with sequence similarity 115, member A	AK148593|Fam115a|77574|family with sequence similarity 115, member A	AK053509|Fam115a|77574|family with sequence similarity 115, member A	NM_029930|Fam115a|77574|family with sequence similarity 115, member A	BC031718|Fam115a|77574|family with sequence similarity 115, member A
mm9_v1_chrX_+_130829763_130829919	0.633105	NKX3-2.p2	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr11_-_69479553_69479654	0.632548	NKX3-2.p2	NM_009853|Cd68|12514|CD68 antigen	AK170443|Cd68|12514|CD68 antigen	BC021637|Cd68|12514|CD68 antigen	AK002264|Cd68|12514|CD68 antigen	X68273|Cd68|12514|CD68 antigen
mm9_v1_chr5_-_108304062_108304125	0.631849	NKX3-2.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr6_+_91162756_91162777	0.631734	NKX3-2.p2	NM_001081437|Fbln2|14115|fibulin 2	NM_007992|Fbln2|14115|fibulin 2	BC005443|Fbln2|14115|fibulin 2
mm9_v1_chr4_-_136965705_136965705	0.631318	NKX3-2.p2	NM_001126318|Gm13011|242711|predicted gene 13011
mm9_v1_chrX_+_98572571_98572682	0.631236	NKX3-2.p2	BC026833|Gjb1|14618|gap junction protein, beta 1	NM_008124|Gjb1|14618|gap junction protein, beta 1
mm9_v1_chr18_+_82723907_82723917	0.629512	NKX3-2.p2	AK147966|Mbp|17196|myelin basic protein
mm9_v1_chr16_-_87432721_87432850	0.629313	NKX3-2.p2	AK173009|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK165062|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK036725|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK019706|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116272|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116273|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	NM_001081068|Ltn1|78913|listerin E3 ubiquitin protein ligase 1
mm9_v1_chr3_+_89222458_89222496	0.629084	NKX3-2.p2	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr10_+_12810593_12810650	0.628931	NKX3-2.p2	BC065150|Plagl1|22634|pleiomorphic adenoma gene-like 1	NM_009538|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142210|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142052|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr11_-_118770873_118770885	0.627159	NKX3-2.p2	AK079086|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001024931|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001039167|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001039168|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3
mm9_v1_chr5_-_24501570_24501713	0.626734	NKX3-2.p2	AK032238|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr5_+_114830824_114830838	0.626591	NKX3-2.p2	AK088518|Ube3b|117146|ubiquitin protein ligase E3B
mm9_v1_chr11_+_75323552_75323644	0.625407	NKX3-2.p2	NM_001029938|Rilp|280408|Rab interacting lysosomal protein	AK139016|Rilp|280408|Rab interacting lysosomal protein	BC116750|Rilp|280408|Rab interacting lysosomal protein	BC119166|Rilp|280408|Rab interacting lysosomal protein
mm9_v1_chr1_+_74331503_74331655	0.625102	NKX3-2.p2	AF318058|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116236|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116237|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_001039509|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_025580|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC008274|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC058945|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK012976|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK173125|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK009545|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY039041|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY299972|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK166548|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr1_+_195128163_195128239	0.624538	NKX3-2.p2	NM_008484|Lamb3|16780|laminin, beta 3	U43298|Lamb3|16780|laminin, beta 3
mm9_v1_chr2_+_112295120_112295230	0.623822	NKX3-2.p2	NM_133749|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC080668|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ250345|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ278128|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK088738|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK013744|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115477|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115478|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK182314|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr5_+_31117077_31117214	0.623777	NKX3-2.p2	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr3_-_36374572_36374652	0.62365	NKX3-2.p2	AK153476|Anxa5|11747|annexin A5	BC003716|Anxa5|11747|annexin A5	AK147740|Anxa5|11747|annexin A5	AK153388|Anxa5|11747|annexin A5	AK152185|Anxa5|11747|annexin A5
mm9_v1_chr2_+_164311755_164311970	0.62333	NKX3-2.p2	BC030298|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_026797|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr6_+_122463595_122463620	0.621446	NKX3-2.p2	AK011458|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr16_-_57231484_57231596	0.620845	NKX3-2.p2	AK171591|Tbc1d23|67581|TBC1 domain family, member 23	BC031706|Tbc1d23|67581|TBC1 domain family, member 23	NM_026254|Tbc1d23|67581|TBC1 domain family, member 23	AK155142|Tbc1d23|67581|TBC1 domain family, member 23
mm9_v1_chr2_-_153270059_153270214	0.619938	NKX3-2.p2	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr7_+_108599819_108599861	0.619	NKX3-2.p2	AK158354|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK172397|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170573|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170395|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr14_-_71028756_71028866	0.618873	NKX3-2.p2	AK162866|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr17_-_35309654_35309677	0.617924	NKX3-2.p2	BC021539|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr2_+_163519756_163519774	0.61787	NKX3-2.p2	NM_011106|Pkig|18769|protein kinase inhibitor, gamma	U97170|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr9_+_111341608_111341622	0.617674	NKX3-2.p2	AK050312|Dclk3|245038|doublecortin-like kinase 3	DQ286388|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr17_-_56429892_56429938	0.617068	NKX3-2.p2	DQ257436|Plin3|66905|perilipin 3	BC011116|Plin3|66905|perilipin 3	AK050140|Plin3|66905|perilipin 3	AK167214|Plin3|66905|perilipin 3	AK004970|Plin3|66905|perilipin 3	AK012517|Plin3|66905|perilipin 3	AK049537|Plin3|66905|perilipin 3	AK132313|Plin3|66905|perilipin 3	NM_025836|Plin3|66905|perilipin 3
mm9_v1_chr7_-_54387915_54388047	0.615741	NKX3-2.p2	NM_001163565|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC079592|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr16_+_35983402_35983472	0.614915	NKX3-2.p2	AK169464|Kpna1|16646|karyopherin (importin) alpha 1	AK169311|Kpna1|16646|karyopherin (importin) alpha 1	AK169348|Kpna1|16646|karyopherin (importin) alpha 1	AK028307|Kpna1|16646|karyopherin (importin) alpha 1	AK154800|Kpna1|16646|karyopherin (importin) alpha 1	AK028259|Kpna1|16646|karyopherin (importin) alpha 1	NM_008465|Kpna1|16646|karyopherin (importin) alpha 1	U20619|Kpna1|16646|karyopherin (importin) alpha 1	BC006771|Kpna1|16646|karyopherin (importin) alpha 1
mm9_v1_chr2_-_34681496_34681692	0.614807	NKX3-2.p2	X54352|Fbxw2|30050|F-box and WD-40 domain protein 2	AK009893|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr11_-_21270436_21270515	0.614674	NKX3-2.p2	BC023810|Ugp2|216558|UDP-glucose pyrophosphorylase 2	AK033445|Ugp2|216558|UDP-glucose pyrophosphorylase 2	AF424698|Ugp2|216558|UDP-glucose pyrophosphorylase 2	AK196595|Ugp2|216558|UDP-glucose pyrophosphorylase 2	AK197624|Ugp2|216558|UDP-glucose pyrophosphorylase 2	AK209798|Ugp2|216558|UDP-glucose pyrophosphorylase 2	BC061208|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr5_+_32761332_32761346	0.614205	NKX3-2.p2	NM_172707|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166416|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr13_+_55802874_55802961	0.61283	NKX3-2.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr15_-_8660462_8660476	0.611563	NKX3-2.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr11_+_52202706_52202713	0.610104	NKX3-2.p2	AK183628|Vdac1|22333|voltage-dependent anion channel 1	AK195288|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr5_-_135223110_135223192	0.608505	NKX3-2.p2	U08210|Eln|13717|elastin	BC051074|Eln|13717|elastin	AK086777|Eln|13717|elastin	AK041860|Eln|13717|elastin	NM_007925|Eln|13717|elastin	AK080277|Eln|13717|elastin	BC051649|Eln|13717|elastin
mm9_v1_chr1_-_172989475_172989533	0.607407	NKX3-2.p2	BC052819|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897424|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897420|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK159919|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897419|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897421|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897422|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897423|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897429|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897425|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897426|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897427|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK151557|Fcgr3|14131|Fc receptor, IgG, low affinity III	AY897428|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK077227|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK151795|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK152875|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK153384|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK153449|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK169887|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK154892|Fcgr3|14131|Fc receptor, IgG, low affinity III	AK171289|Fcgr3|14131|Fc receptor, IgG, low affinity III	AF197930|Fcgr3|14131|Fc receptor, IgG, low affinity III	M14215|Fcgr3|14131|Fc receptor, IgG, low affinity III	NM_010188|Fcgr3|14131|Fc receptor, IgG, low affinity III
mm9_v1_chr4_-_57155985_57156016	0.604581	NKX3-2.p2	AK165783|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr7_-_31348148_31348229	0.603718	NKX3-2.p2	AK002440|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK007621|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK006284|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC024347|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	NM_025498|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC081443|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)
mm9_v1_chr8_-_107850154_107850175	0.602001	NKX3-2.p2	BC034290|Lrrc29|234684|leucine rich repeat containing 29	AK041606|Lrrc29|234684|leucine rich repeat containing 29	AK042435|Lrrc29|234684|leucine rich repeat containing 29	AK170400|Lrrc29|234684|leucine rich repeat containing 29	AK148120|Lrrc29|234684|leucine rich repeat containing 29	NM_177449|Lrrc29|234684|leucine rich repeat containing 29
mm9_v1_chr4_+_151648348_151648470	0.600783	NKX3-2.p2	NM_178406|Gpr153|100129|G protein-coupled receptor 153
mm9_v1_chr4_+_129662110_129662138	0.598852	NKX3-2.p2	AK147485|Bai2|230775|brain-specific angiogenesis inhibitor 2
mm9_v1_chr1_+_184695026_184695133	0.59883	NKX3-2.p2	BC021842|Susd4|96935|sushi domain containing 4	NM_144796|Susd4|96935|sushi domain containing 4	AK035779|Susd4|96935|sushi domain containing 4	AK088629|Susd4|96935|sushi domain containing 4
mm9_v1_chr17_+_41071633_41071710	0.59863	NKX3-2.p2	NM_008650|Mut|17850|methylmalonyl-Coenzyme A mutase	BC019175|Mut|17850|methylmalonyl-Coenzyme A mutase	AK146309|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr16_+_31428882_31428885	0.597684	NKX3-2.p2	AK009575|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr12_+_78576551_78576710	0.597562	NKX3-2.p2	AK188352|Fut8|53618|fucosyltransferase 8	AK210295|Fut8|53618|fucosyltransferase 8	AK216622|Fut8|53618|fucosyltransferase 8
mm9_v1_chr12_-_52792851_52792915	0.59673	NKX3-2.p2	BC138055|Strn3|94186|striatin, calmodulin binding protein 3	BC145127|Strn3|94186|striatin, calmodulin binding protein 3	AF307777|Strn3|94186|striatin, calmodulin binding protein 3	EF685152|Strn3|94186|striatin, calmodulin binding protein 3	AK139183|Strn3|94186|striatin, calmodulin binding protein 3	AK140447|Strn3|94186|striatin, calmodulin binding protein 3	AK164967|Strn3|94186|striatin, calmodulin binding protein 3	NM_001172098|Strn3|94186|striatin, calmodulin binding protein 3	NM_052973|Strn3|94186|striatin, calmodulin binding protein 3
mm9_v1_chr15_-_78359994_78360032	0.596692	NKX3-2.p2	AK051058|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC025489|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK012868|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chrX_-_101176574_101176590	0.596238	NKX3-2.p2	AF069992|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr14_+_25309968_25309977	0.59451	NKX3-2.p2	AK167874|Rps24|20088|ribosomal protein S24
mm9_v1_chr7_+_108599740_108599766	0.593767	NKX3-2.p2	NM_001143849|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr5_+_130263548_130263603	0.593395	NKX3-2.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr8_+_119028873_119028914	0.592542	NKX3-2.p2	BC048623|Dynlrb2|75465|dynein light chain roadblock-type 2	AK005789|Dynlrb2|75465|dynein light chain roadblock-type 2	NM_029297|Dynlrb2|75465|dynein light chain roadblock-type 2
mm9_v1_chr10_-_80813198_80813232	0.592475	NKX3-2.p2	AK153816|Hmg20b|15353|high mobility group 20 B	NM_001163166|Hmg20b|15353|high mobility group 20 B
mm9_v1_chr3_-_40650624_40650795	0.592101	NKX3-2.p2	BC010483|Mfsd8|72175|major facilitator superfamily domain containing 8	AK013144|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113183|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113790|Mfsd8|72175|major facilitator superfamily domain containing 8	AK035291|Mfsd8|72175|major facilitator superfamily domain containing 8	AK077957|Mfsd8|72175|major facilitator superfamily domain containing 8	NM_028140|Mfsd8|72175|major facilitator superfamily domain containing 8	AK032080|Mfsd8|72175|major facilitator superfamily domain containing 8
mm9_v1_chr9_-_64101138_64101232	0.591629	NKX3-2.p2	L02526|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC054754|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC051137|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr12_-_31058094_31058250	0.590444	NKX3-2.p2	AF367760|Sntg2|268534|syntrophin, gamma 2	BC058204|Sntg2|268534|syntrophin, gamma 2	BC138956|Sntg2|268534|syntrophin, gamma 2	BC145476|Sntg2|268534|syntrophin, gamma 2	AK008673|Sntg2|268534|syntrophin, gamma 2	AK035310|Sntg2|268534|syntrophin, gamma 2	AK087560|Sntg2|268534|syntrophin, gamma 2	AK137345|Sntg2|268534|syntrophin, gamma 2	NM_172951|Sntg2|268534|syntrophin, gamma 2
mm9_v1_chr16_-_84831712_84831743	0.587023	NKX3-2.p2	U77128|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr11_+_100181296_100181331	0.586708	NKX3-2.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr1_+_174412343_174412487	0.586497	NKX3-2.p2	NM_001145800|Igsf9|93842|immunoglobulin superfamily, member 9	AK053544|Igsf9|93842|immunoglobulin superfamily, member 9	AK078536|Igsf9|93842|immunoglobulin superfamily, member 9	BC034594|Igsf9|93842|immunoglobulin superfamily, member 9	AK145121|Igsf9|93842|immunoglobulin superfamily, member 9	AF317839|Igsf9|93842|immunoglobulin superfamily, member 9	NM_033608|Igsf9|93842|immunoglobulin superfamily, member 9	BC040281|Igsf9|93842|immunoglobulin superfamily, member 9
mm9_v1_chr15_+_3230053_3230123	0.58603	NKX3-2.p2	
mm9_v1_chr1_+_157005804_157006022	0.585603	NKX3-2.p2	NM_021433|Stx6|58244|syntaxin 6	AK018167|Stx6|58244|syntaxin 6	AK031673|Stx6|58244|syntaxin 6	AK159392|Stx6|58244|syntaxin 6	AK019106|Stx6|58244|syntaxin 6	AK044905|Stx6|58244|syntaxin 6	AK049124|Stx6|58244|syntaxin 6	AK009690|Stx6|58244|syntaxin 6	AK151549|Stx6|58244|syntaxin 6	BC029205|Stx6|58244|syntaxin 6	AF237814|Stx6|58244|syntaxin 6
mm9_v1_chr6_+_86388364_86388435	0.584949	NKX3-2.p2	AK047127|C87436|232196|expressed sequence C87436	NM_146170|C87436|232196|expressed sequence C87436	AK170524|C87436|232196|expressed sequence C87436	AK171511|C87436|232196|expressed sequence C87436	BC025632|C87436|232196|expressed sequence C87436
mm9_v1_chr2_+_28061156_28061215	0.584151	NKX3-2.p2	D78262|Olfm1|56177|olfactomedin 1	D78263|Olfm1|56177|olfactomedin 1	NM_001038612|Olfm1|56177|olfactomedin 1	NM_019498|Olfm1|56177|olfactomedin 1
mm9_v1_chr3_-_89151364_89151390	0.583035	NKX3-2.p2	AK204200|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)
mm9_v1_chr2_+_164311639_164311740	0.582637	NKX3-2.p2	NM_001048227|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr10_+_86984670_86984685	0.582478	NKX3-2.p2	AK149519|Pah|18478|phenylalanine hydroxylase	AK145839|Pah|18478|phenylalanine hydroxylase	BC013458|Pah|18478|phenylalanine hydroxylase
mm9_v1_chrX_+_135751704_135751704	0.581303	NKX3-2.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr5_-_124053691_124053818	0.581266	NKX3-2.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr2_+_71624985_71625139	0.580977	NKX3-2.p2	AK018033|Itga6|16403|integrin alpha 6	BC049132|Itga6|16403|integrin alpha 6	BC058095|Itga6|16403|integrin alpha 6	X69902|Itga6|16403|integrin alpha 6	AK034186|Itga6|16403|integrin alpha 6	NM_008397|Itga6|16403|integrin alpha 6
mm9_v1_chr17_+_37035062_37035074	0.580318	NKX3-2.p2	AK033650|Trim31|224762|tripartite motif-containing 31	BC026666|Trim31|224762|tripartite motif-containing 31	NM_146077|Trim31|224762|tripartite motif-containing 31
mm9_v1_chrX_-_92221960_92222040	0.580305	NKX3-2.p2	AK155170|Spin4|270624|spindlin family, member 4	BC027796|Spin4|270624|spindlin family, member 4	AK047896|Spin4|270624|spindlin family, member 4	AK147852|Spin4|270624|spindlin family, member 4	AK043030|Spin4|270624|spindlin family, member 4	AK036158|Spin4|270624|spindlin family, member 4	NM_178753|Spin4|270624|spindlin family, member 4
mm9_v1_chr11_-_69509298_69509323	0.579603	NKX3-2.p2	BC096441|BC096441|619441|cDNA sequence BC096441
mm9_v1_chr11_-_95926302_95926380	0.578545	NKX3-2.p2	BC027266|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK168942|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	BC054412|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr11_+_45869506_45869586	0.577143	NKX3-2.p2	D50410|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AK147217|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AF019887|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC115767|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr5_-_34000478_34000532	0.575123	NKX3-2.p2	BC094042|Tmem129|68366|transmembrane protein 129	NM_026698|Tmem129|68366|transmembrane protein 129	BC029088|Tmem129|68366|transmembrane protein 129	AK002836|Tmem129|68366|transmembrane protein 129
mm9_v1_chrX_+_7848517_7848554	0.575113	NKX3-2.p2	NM_172479|Slc38a5|209837|solute carrier family 38, member 5	AK054485|Slc38a5|209837|solute carrier family 38, member 5	AK077667|Slc38a5|209837|solute carrier family 38, member 5	BC152401|Slc38a5|209837|solute carrier family 38, member 5	AK155928|Slc38a5|209837|solute carrier family 38, member 5
mm9_v1_chr2_+_145648290_145648325	0.573646	NKX3-2.p2	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr9_+_77961211_77961215	0.57197	NKX3-2.p2	AF225918|Ick|56542|intestinal cell kinase
mm9_v1_chr2_+_172825687_172825696	0.569226	NKX3-2.p2	BC059051|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK017746|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr14_+_25309895_25309936	0.568658	NKX3-2.p2	NM_011297|Rps24|20088|ribosomal protein S24	NM_207634|Rps24|20088|ribosomal protein S24	NM_207635|Rps24|20088|ribosomal protein S24
mm9_v1_chr3_-_36374562_36374570	0.568521	NKX3-2.p2	U29396|Anxa5|11747|annexin A5
mm9_v1_chr16_+_90738550_90738642	0.568037	NKX3-2.p2	AK003912|Mrap|77037|melanocortin 2 receptor accessory protein	NM_029844|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr16_+_30065419_30065442	0.566693	NKX3-2.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr18_+_69753035_69753127	0.565266	NKX3-2.p2	AK014343|Tcf4|21413|transcription factor 4	U16321|Tcf4|21413|transcription factor 4	AK132140|Tcf4|21413|transcription factor 4	BC014293|Tcf4|21413|transcription factor 4
mm9_v1_chr4_-_126991216_126991282	0.563928	NKX3-2.p2	BC056613|Gja4|14612|gap junction protein, alpha 4	AF216832|Gja4|14612|gap junction protein, alpha 4	NM_008120|Gja4|14612|gap junction protein, alpha 4	AK143024|Gja4|14612|gap junction protein, alpha 4
mm9_v1_chr13_-_53568111_53568148	0.563715	NKX3-2.p2	AK131974|Msx2|17702|homeobox, msh-like 2	BC141132|Msx2|17702|homeobox, msh-like 2	AK133846|Msx2|17702|homeobox, msh-like 2	NM_013601|Msx2|17702|homeobox, msh-like 2
mm9_v1_chr2_+_145647868_145648056	0.563675	NKX3-2.p2	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr17_+_70871444_70871503	0.56331	NKX3-2.p2	NM_001128180|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK161941|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK163689|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr11_-_43415012_43415033	0.5632	NKX3-2.p2	NM_008375|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC119289|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC120767|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)
mm9_v1_chr11_+_97888269_97888292	0.563127	NKX3-2.p2	BC089549|Rpl19|19921|ribosomal protein L19	AK010440|Rpl19|19921|ribosomal protein L19	AK075817|Rpl19|19921|ribosomal protein L19	BC087961|Rpl19|19921|ribosomal protein L19	BC092539|Rpl19|19921|ribosomal protein L19	BC083131|Rpl19|19921|ribosomal protein L19	BC010710|Rpl19|19921|ribosomal protein L19
mm9_v1_chr17_+_80014390_80014404	0.561676	NKX3-2.p2	AK139382|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr10_+_75031386_75031408	0.561161	NKX3-2.p2	L17334|Ggt1|14598|gamma-glutamyltransferase 1	AK079235|Ggt1|14598|gamma-glutamyltransferase 1
mm9_v1_chr6_+_141472906_141473070	0.559916	NKX3-2.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr13_-_55671276_55671335	0.559027	NKX3-2.p2	AK173303|Fam193b|212483|family with sequence similarity 193, member B	BC025483|Fam193b|212483|family with sequence similarity 193, member B	NM_001162881|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr18_+_62708564_62708648	0.558417	NKX3-2.p2	AK039062|Spink10|328971|serine peptidase inhibitor, Kazal type 10	DQ437330|Spink10|328971|serine peptidase inhibitor, Kazal type 10	NM_177829|Spink10|328971|serine peptidase inhibitor, Kazal type 10	AK162840|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125360|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125362|Spink10|328971|serine peptidase inhibitor, Kazal type 10
mm9_v1_chr15_-_82169203_82169306	0.558085	NKX3-2.p2	AF079458|Naga|17939|N-acetyl galactosaminidase, alpha	AK133576|Naga|17939|N-acetyl galactosaminidase, alpha	BC021631|Naga|17939|N-acetyl galactosaminidase, alpha	AK077116|Naga|17939|N-acetyl galactosaminidase, alpha	AK153002|Naga|17939|N-acetyl galactosaminidase, alpha	NM_008669|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr9_+_54997159_54997206	0.556943	NKX3-2.p2	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chrX_+_136335346_136335366	0.556809	NKX3-2.p2	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr11_-_61058671_61058791	0.556037	NKX3-2.p2	
mm9_v1_chr8_-_96622710_96622710	0.555911	NKX3-2.p2	AF342737|Bbs2|67378|Bardet-Biedl syndrome 2 (human)	NM_026116|Bbs2|67378|Bardet-Biedl syndrome 2 (human)
mm9_v1_chr9_-_108984865_108984900	0.555598	NKX3-2.p2	BC106104|Ccdc72|66167|coiled-coil domain containing 72	BC054363|Ccdc72|66167|coiled-coil domain containing 72	BC090400|Ccdc72|66167|coiled-coil domain containing 72	BC034602|Ccdc72|66167|coiled-coil domain containing 72	AK169860|Ccdc72|66167|coiled-coil domain containing 72	BC116987|Ccdc72|66167|coiled-coil domain containing 72	BC116989|Ccdc72|66167|coiled-coil domain containing 72	AK160705|Ccdc72|66167|coiled-coil domain containing 72	AK002863|Ccdc72|66167|coiled-coil domain containing 72	AK003762|Ccdc72|66167|coiled-coil domain containing 72	NM_183250|Ccdc72|66167|coiled-coil domain containing 72
mm9_v1_chr15_-_32174172_32174174	0.554931	NKX3-2.p2	AK007520|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chrX_-_34404128_34404240	0.554567	NKX3-2.p2	BC085302|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	BC051144|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK032304|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK036910|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK084447|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK044209|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK034943|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK141615|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK035825|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	AK021190|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene	NM_029951|C330007P06Rik|77644|RIKEN cDNA C330007P06 gene
mm9_v1_chr1_-_120950111_120950195	0.554069	NKX3-2.p2	BC085190|Gli2|14633|GLI-Kruppel family member GLI2	BC082604|Gli2|14633|GLI-Kruppel family member GLI2	NM_001081125|Gli2|14633|GLI-Kruppel family member GLI2
mm9_v1_chr8_-_109580565_109580585	0.553669	NKX3-2.p2	BC094654|Cog8|97484|component of oligomeric golgi complex 8	AK156186|Cog8|97484|component of oligomeric golgi complex 8	AK159569|Cog8|97484|component of oligomeric golgi complex 8	AK083734|Cog8|97484|component of oligomeric golgi complex 8	AK145727|Cog8|97484|component of oligomeric golgi complex 8	AK153617|Cog8|97484|component of oligomeric golgi complex 8	AK049957|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr3_-_36374517_36374560	0.553515	NKX3-2.p2	D63423|Anxa5|11747|annexin A5
mm9_v1_chr5_-_149363603_149363821	0.551896	NKX3-2.p2	AF044223|Ubl3|24109|ubiquitin-like 3	AK134598|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr11_+_34934956_34934982	0.551793	NKX3-2.p2	NM_011412|Slit3|20564|slit homolog 3 (Drosophila)	AK147292|Slit3|20564|slit homolog 3 (Drosophila)	BC150780|Slit3|20564|slit homolog 3 (Drosophila)
mm9_v1_chr8_-_64238843_64238855	0.550696	NKX3-2.p2	BC027364|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr11_-_87172419_87172533	0.550352	NKX3-2.p2	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr17_-_14831262_14831287	0.550277	NKX3-2.p2	NM_011581|Thbs2|21826|thrombospondin 2
mm9_v1_chr7_-_117509277_117509385	0.550097	NKX3-2.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr5_+_30925568_30925589	0.549941	NKX3-2.p2	AK084790|Kcnk3|16527|potassium channel, subfamily K, member 3
mm9_v1_chrX_-_133276147_133276147	0.548024	NKX3-2.p2	BC075653|Morf4l2|56397|mortality factor 4 like 2	NM_019768|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_-_23635220_23635312	0.546268	NKX3-2.p2	NM_178197|Hist1h2bh|319182|histone cluster 1, H2bh	BC092138|Hist1h2bh|319182|histone cluster 1, H2bh	AK158416|Hist1h2bh|319182|histone cluster 1, H2bh	BC132584|Hist1h2bh|319182|histone cluster 1, H2bh	BC132586|Hist1h2bh|319182|histone cluster 1, H2bh
mm9_v1_chr11_-_120051109_120051205	0.545025	NKX3-2.p2	AK013071|2810410L24Rik|100042332|RIKEN cDNA 2810410L24 gene	AK164256|2810410L24Rik|100042332|RIKEN cDNA 2810410L24 gene	AK162474|2810410L24Rik|100042332|RIKEN cDNA 2810410L24 gene
mm9_v1_chr4_+_122860705_122860828	0.544475	NKX3-2.p2	AK032591|Hpcal4|170638|hippocalcin-like 4	NM_174998|Hpcal4|170638|hippocalcin-like 4
mm9_v1_chr6_+_39546504_39546524	0.544366	NKX3-2.p2	
mm9_v1_chr15_-_103070227_103070257	0.542748	NKX3-2.p2	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr12_-_105195097_105195135	0.542131	NKX3-2.p2	M75717|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	BC061176|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	NM_009247|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK004999|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK135650|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E
mm9_v1_chr19_+_34658016_34658052	0.541087	NKX3-2.p2	AK153226|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	NM_010501|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK077459|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK151032|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC089563|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	L32974|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC003804|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3
mm9_v1_chr7_+_149628285_149628372	0.540957	NKX3-2.p2	J04992|Tnni2|21953|troponin I, skeletal, fast 2	NM_009405|Tnni2|21953|troponin I, skeletal, fast 2
mm9_v1_chr5_-_130363202_130363339	0.540947	NKX3-2.p2	AK088374|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	NM_024166|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2
mm9_v1_chr5_-_23948000_23948115	0.539342	NKX3-2.p2	
mm9_v1_chr16_+_20535519_20535657	0.539323	NKX3-2.p2	AK146517|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK168414|Ap2m1|11773|adaptor protein complex AP-2, mu1	NM_009679|Ap2m1|11773|adaptor protein complex AP-2, mu1	U27106|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK159534|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC056352|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK150358|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC089342|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC094510|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK143586|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK141862|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK172889|Ap2m1|11773|adaptor protein complex AP-2, mu1
mm9_v1_chr9_+_7692110_7692113	0.538405	NKX3-2.p2	BC119057|Mmp7|17393|matrix metallopeptidase 7	BC120655|Mmp7|17393|matrix metallopeptidase 7	NM_010810|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr17_-_34987110_34987130	0.537648	NKX3-2.p2	AK169864|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	BC065999|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr2_-_73613381_73613446	0.536724	NKX3-2.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr6_+_41408925_41408939	0.535555	NKX3-2.p2	NM_053243|Prss1|114228|protease, serine, 1 (trypsin 1)	BC094921|Prss1|114228|protease, serine, 1 (trypsin 1)
mm9_v1_chr7_-_35597470_35597729	0.535269	NKX3-2.p2	AK005217|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AF308145|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	BC051124|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK038952|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK051290|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_175140|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm9_v1_chr1_-_135320788_135320788	0.535262	NKX3-2.p2	NM_011439|Sox13|20668|SRY-box containing gene 13
mm9_v1_chr2_+_69735301_69735369	0.534266	NKX3-2.p2	DQ924536|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_001081548|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_177783|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	AK037622|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr2_-_120434984_120435243	0.533405	NKX3-2.p2	AK003592|Lrrc57|66606|leucine rich repeat containing 57	AK169249|Lrrc57|66606|leucine rich repeat containing 57	BC034894|Lrrc57|66606|leucine rich repeat containing 57	AK003037|Lrrc57|66606|leucine rich repeat containing 57	NM_025657|Lrrc57|66606|leucine rich repeat containing 57	AK012637|Lrrc57|66606|leucine rich repeat containing 57	AK033084|Lrrc57|66606|leucine rich repeat containing 57	AK134971|Lrrc57|66606|leucine rich repeat containing 57	NM_001159612|Lrrc57|66606|leucine rich repeat containing 57	AK015684|Lrrc57|66606|leucine rich repeat containing 57	AK019566|Lrrc57|66606|leucine rich repeat containing 57	NM_001159609|Lrrc57|66606|leucine rich repeat containing 57	NM_001159610|Lrrc57|66606|leucine rich repeat containing 57
mm9_v1_chr4_+_19969198_19969248	0.533292	NKX3-2.p2	NM_010281|Ggh|14590|gamma-glutamyl hydrolase	AF051102|Ggh|14590|gamma-glutamyl hydrolase	AK089996|Ggh|14590|gamma-glutamyl hydrolase
mm9_v1_chr14_-_104242892_104242969	0.532784	NKX3-2.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr10_-_60846055_60846288	0.532258	NKX3-2.p2	X99384|X99384|27355|cDNA sequence X99384	BC099531|X99384|27355|cDNA sequence X99384	BC052850|X99384|27355|cDNA sequence X99384	AK088577|X99384|27355|cDNA sequence X99384	AK146489|X99384|27355|cDNA sequence X99384	NM_013753|X99384|27355|cDNA sequence X99384
mm9_v1_chr7_+_29595894_29595998	0.532068	NKX3-2.p2	NM_177301|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L	BC099683|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L	BC027206|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L	AK144684|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L	AK085906|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L
mm9_v1_chr4_+_155213788_155213790	0.530987	NKX3-2.p2	NM_024263|Mxra8|74761|matrix-remodelling associated 8
mm9_v1_chr7_+_104601713_104601713	0.530211	NKX3-2.p2	AK145279|Kctd14|233529|potassium channel tetramerisation domain containing 14	AY899809|Kctd14|233529|potassium channel tetramerisation domain containing 14	NM_001010826|Kctd14|233529|potassium channel tetramerisation domain containing 14	NM_001012434|Kctd14|233529|potassium channel tetramerisation domain containing 14
mm9_v1_chr9_+_56712850_56712966	0.529689	NKX3-2.p2	NM_139001|Cspg4|121021|chondroitin sulfate proteoglycan 4	AF352400|Cspg4|121021|chondroitin sulfate proteoglycan 4
mm9_v1_chr8_+_73118329_73118423	0.524381	NKX3-2.p2	AF288525|Isyna1|71780|myo-inositol 1-phosphate synthase A1	NM_023627|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK137089|Isyna1|71780|myo-inositol 1-phosphate synthase A1	BC003458|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK005029|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK079323|Isyna1|71780|myo-inositol 1-phosphate synthase A1
mm9_v1_chr9_-_8004559_8004652	0.524229	NKX3-2.p2	BC094313|Yap1|22601|yes-associated protein 1	BC014733|Yap1|22601|yes-associated protein 1	X80508|Yap1|22601|yes-associated protein 1	AK157234|Yap1|22601|yes-associated protein 1	NM_001171147|Yap1|22601|yes-associated protein 1	NM_009534|Yap1|22601|yes-associated protein 1
mm9_v1_chr11_-_51420064_51420093	0.52374	NKX3-2.p2	DQ397821|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	DQ397822|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr13_+_21845991_21845991	0.522691	NKX3-2.p2	NM_178201|Hist1h2bn|319187|histone cluster 1, H2bn
mm9_v1_chr4_-_86876328_86876443	0.52234	NKX3-2.p2	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr9_-_83040061_83040223	0.522238	NKX3-2.p2	AK002970|Hmgn3|94353|high mobility group nucleosomal binding domain 3	BC005693|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK003272|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK153223|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_026122|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_175074|Hmgn3|94353|high mobility group nucleosomal binding domain 3
mm9_v1_chr14_-_61665691_61665691	0.522052	NKX3-2.p2	NM_013869|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr17_-_34987150_34987162	0.521368	NKX3-2.p2	AK139051|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr10_+_52410306_52410508	0.521169	NKX3-2.p2	NM_178675|Slc35f1|215085|solute carrier family 35, member F1	AK038601|Slc35f1|215085|solute carrier family 35, member F1	AK053426|Slc35f1|215085|solute carrier family 35, member F1	AK139331|Slc35f1|215085|solute carrier family 35, member F1	AK048957|Slc35f1|215085|solute carrier family 35, member F1	AK165021|Slc35f1|215085|solute carrier family 35, member F1	AK053545|Slc35f1|215085|solute carrier family 35, member F1	AK083768|Slc35f1|215085|solute carrier family 35, member F1	AK166268|Slc35f1|215085|solute carrier family 35, member F1	BC059075|Slc35f1|215085|solute carrier family 35, member F1	AK163806|Slc35f1|215085|solute carrier family 35, member F1
mm9_v1_chr5_+_125956221_125956249	0.519218	NKX3-2.p2	AK019063|Aacs|78894|acetoacetyl-CoA synthetase	AK044017|Aacs|78894|acetoacetyl-CoA synthetase	AK147189|Aacs|78894|acetoacetyl-CoA synthetase	AK150266|Aacs|78894|acetoacetyl-CoA synthetase	AK165418|Aacs|78894|acetoacetyl-CoA synthetase	AK165457|Aacs|78894|acetoacetyl-CoA synthetase	AK170120|Aacs|78894|acetoacetyl-CoA synthetase	AK170653|Aacs|78894|acetoacetyl-CoA synthetase	AK170856|Aacs|78894|acetoacetyl-CoA synthetase	NM_030210|Aacs|78894|acetoacetyl-CoA synthetase
mm9_v1_chr8_-_41596638_41596711	0.518069	NKX3-2.p2	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr7_-_54387695_54387755	0.515154	NKX3-2.p2	BC057339|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC051975|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	AK038416|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr2_+_29475402_29475429	0.514794	NKX3-2.p2	BC129881|Rapgef1|107746|Rap guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr17_+_27070071_27070094	0.514664	NKX3-2.p2	AK139088|Phf1|21652|PHD finger protein 1	NM_009343|Phf1|21652|PHD finger protein 1	AK155268|Phf1|21652|PHD finger protein 1	AK144793|Phf1|21652|PHD finger protein 1	AK076365|Phf1|21652|PHD finger protein 1
mm9_v1_chr3_+_142364014_142364083	0.514572	NKX3-2.p2	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chr6_-_115201790_115201797	0.514054	NKX3-2.p2	AF282730|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr2_-_38920925_38921012	0.514008	NKX3-2.p2	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr5_+_145875080_145875194	0.513617	NKX3-2.p2	AK002274|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK005378|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK151911|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK153510|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	NM_023142|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159371|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159477|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK168774|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK148145|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK157098|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK170759|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK172124|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK147731|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK171364|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC092051|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK180107|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK197333|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC003441|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK167978|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC010275|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr1_-_132954105_132954147	0.513469	NKX3-2.p2	BC024559|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr2_-_140485267_140485302	0.513381	NKX3-2.p2	AK017456|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr3_+_121234528_121234590	0.512883	NKX3-2.p2	AK040725|A530020G20Rik|319839|RIKEN cDNA A530020G20 gene	AK040960|A530020G20Rik|319839|RIKEN cDNA A530020G20 gene
mm9_v1_chr8_-_73292296_73292389	0.512602	NKX3-2.p2	
mm9_v1_chr14_-_70923865_70923890	0.512467	NKX3-2.p2	BC061137|Sftpc|20389|surfactant associated protein C	NM_011359|Sftpc|20389|surfactant associated protein C
mm9_v1_chr9_+_107465568_107465700	0.510896	NKX3-2.p2	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr17_-_90487479_90487653	0.509518	NKX3-2.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chr11_-_4999029_4999066	0.509403	NKX3-2.p2	AK019460|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK150345|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK147909|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK153276|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK147103|Ewsr1|14030|Ewing sarcoma breakpoint region 1	BC068226|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK151625|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK034755|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK146791|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr6_+_78330702_78330753	0.5093	NKX3-2.p2	BC119153|Reg3a|19694|regenerating islet-derived 3 alpha	D63356|Reg3a|19694|regenerating islet-derived 3 alpha	NM_011259|Reg3a|19694|regenerating islet-derived 3 alpha	D63357|Reg3a|19694|regenerating islet-derived 3 alpha
mm9_v1_chr4_+_43455122_43455148	0.509079	NKX3-2.p2	BC099699|Tesk1|21754|testis specific protein kinase 1	NM_011571|Tesk1|21754|testis specific protein kinase 1
mm9_v1_chr2_+_109757803_109757808	0.508371	NKX3-2.p2	NM_172671|Lgr4|107515|leucine-rich repeat-containing G protein-coupled receptor 4
mm9_v1_chr7_-_4473916_4474040	0.50809	NKX3-2.p2	U09181|Tnni3|21954|troponin I, cardiac 3	BC100590|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chr5_+_93112460_93112460	0.507996	NKX3-2.p2	AF199421|Shroom3|27428|shroom family member 3	NM_015756|Shroom3|27428|shroom family member 3
mm9_v1_chr11_-_3271326_3271358	0.507864	NKX3-2.p2	BC086629|Limk2|16886|LIM motif-containing protein kinase 2	AK146099|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr4_+_42339258_42339259	0.507147	NKX3-2.p2	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	NM_001099348|Gm13305|100042555|predicted gene 13305
mm9_v1_chr14_+_4126976_4126976	0.507031	NKX3-2.p2	BC093494|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790	NM_001029930|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790
mm9_v1_chr19_-_5726221_5726316	0.506343	NKX3-2.p2	BC004660|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305087|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305088|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305089|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305090|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK089917|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK169974|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114595|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114596|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114597|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_053252|Ehbp1l1|114601|EH domain binding protein 1-like 1
mm9_v1_chr9_-_115152261_115152330	0.506003	NKX3-2.p2	
mm9_v1_chr15_-_75920355_75920542	0.504472	NKX3-2.p2	BC011468|Nrbp2|223649|nuclear receptor binding protein 2	BC012437|Nrbp2|223649|nuclear receptor binding protein 2	NM_144847|Nrbp2|223649|nuclear receptor binding protein 2
mm9_v1_chr13_-_101500877_101500928	0.504284	NKX3-2.p2	X74145|Cdk7|12572|cyclin-dependent kinase 7	BC068160|Cdk7|12572|cyclin-dependent kinase 7	AK039084|Cdk7|12572|cyclin-dependent kinase 7	AK168286|Cdk7|12572|cyclin-dependent kinase 7	NM_009874|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr16_-_10542689_10542847	0.503132	NKX3-2.p2	AK183993|Dexi|58239|dexamethasone-induced transcript	AF152470|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr15_-_91022198_91022269	0.502125	NKX3-2.p2	AK082588|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	AK051445|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	Z48670|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	NM_011994|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr4_-_40886191_40886208	0.500965	NKX3-2.p2	AK188292|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr4_-_42039325_42039326	0.499793	NKX3-2.p2	NM_001099348|Gm13305|100042555|predicted gene 13305	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2
mm9_v1_chr11_-_113427050_113427128	0.499361	NKX3-2.p2	AK192534|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK007986|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK170673|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK049368|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK036999|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC019647|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC031751|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_001166503|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_027216|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11
mm9_v1_chr1_+_75233130_75233146	0.49928	NKX3-2.p2	AB028858|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr18_+_23468655_23468725	0.499169	NKX3-2.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr1_+_75432496_75432530	0.498216	NKX3-2.p2	NM_133708|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK007463|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr2_-_115890747_115890848	0.497963	NKX3-2.p2	U68383|Meis2|17536|Meis homeobox 2	U68384|Meis2|17536|Meis homeobox 2	AJ000504|Meis2|17536|Meis homeobox 2	AJ000505|Meis2|17536|Meis homeobox 2	AJ000506|Meis2|17536|Meis homeobox 2	AJ000507|Meis2|17536|Meis homeobox 2	AK146633|Meis2|17536|Meis homeobox 2	NM_001136072|Meis2|17536|Meis homeobox 2	NM_001159567|Meis2|17536|Meis homeobox 2	NM_001159568|Meis2|17536|Meis homeobox 2	NM_010825|Meis2|17536|Meis homeobox 2	BC017375|Meis2|17536|Meis homeobox 2
mm9_v1_chr15_-_88808967_88808984	0.496276	NKX3-2.p2	AK030396|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	AK043757|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	BC024719|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	NM_133241|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm9_v1_chr15_+_32850477_32850629	0.495977	NKX3-2.p2	NM_008304|Sdc2|15529|syndecan 2	U00674|Sdc2|15529|syndecan 2	BC047144|Sdc2|15529|syndecan 2	AK011042|Sdc2|15529|syndecan 2
mm9_v1_chr13_-_21808011_21808011	0.4953	NKX3-2.p2	NM_178199|Hist1h2bl|319185|histone cluster 1, H2bl
mm9_v1_chr12_+_45429966_45429998	0.494076	NKX3-2.p2	AJ543321|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr14_+_66963139_66963219	0.493299	NKX3-2.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr4_+_104040160_104040194	0.492741	NKX3-2.p2	NM_010014|Dab1|13131|disabled homolog 1 (Drosophila)	NM_177259|Dab1|13131|disabled homolog 1 (Drosophila)	Y08379|Dab1|13131|disabled homolog 1 (Drosophila)	Y08380|Dab1|13131|disabled homolog 1 (Drosophila)	Y08381|Dab1|13131|disabled homolog 1 (Drosophila)
mm9_v1_chr3_+_95238342_95238357	0.492702	NKX3-2.p2	BC012870|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK145415|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr14_+_56130147_56130196	0.492665	NKX3-2.p2	BC051994|Cpne6|12891|copine VI	AB008893|Cpne6|12891|copine VI	NM_009947|Cpne6|12891|copine VI
mm9_v1_chr4_-_43013187_43013207	0.492472	NKX3-2.p2	Z14044|Vcp|269523|valosin containing protein	AK160889|Vcp|269523|valosin containing protein	AK030751|Vcp|269523|valosin containing protein
mm9_v1_chr6_+_35210429_35210433	0.492169	NKX3-2.p2	AK206324|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chr7_+_3597085_3597155	0.491593	NKX3-2.p2	BC060684|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC141041|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC053437|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr2_+_69735513_69735613	0.490461	NKX3-2.p2	BC145475|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	BC172146|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr4_-_116313684_116313733	0.490125	NKX3-2.p2	AK005162|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011157|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011209|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011221|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr2_-_34681707_34681829	0.489482	NKX3-2.p2	AK033129|Fbxw2|30050|F-box and WD-40 domain protein 2	AK004015|Fbxw2|30050|F-box and WD-40 domain protein 2	AK005103|Fbxw2|30050|F-box and WD-40 domain protein 2	AK040764|Fbxw2|30050|F-box and WD-40 domain protein 2	AK145405|Fbxw2|30050|F-box and WD-40 domain protein 2	AK133758|Fbxw2|30050|F-box and WD-40 domain protein 2	AK045743|Fbxw2|30050|F-box and WD-40 domain protein 2	AK014858|Fbxw2|30050|F-box and WD-40 domain protein 2	AK184904|Fbxw2|30050|F-box and WD-40 domain protein 2	AK078815|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164769|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164770|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164772|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_013890|Fbxw2|30050|F-box and WD-40 domain protein 2	BC003834|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr3_+_131227699_131227731	0.489465	NKX3-2.p2	NM_011863|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm9_v1_chr6_-_90611092_90611239	0.489458	NKX3-2.p2	BC043918|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr10_-_108448003_108448027	0.488421	NKX3-2.p2	BC048187|Syt1|20979|synaptotagmin I	AK019304|Syt1|20979|synaptotagmin I	AK048973|Syt1|20979|synaptotagmin I	AK133578|Syt1|20979|synaptotagmin I
mm9_v1_chr11_+_34934995_34935016	0.488121	NKX3-2.p2	AF144629|Slit3|20564|slit homolog 3 (Drosophila)
mm9_v1_chr7_+_28376578_28376874	0.487164	NKX3-2.p2	AK158792|Akt2|11652|thymoma viral proto-oncogene 2	NM_001110208|Akt2|11652|thymoma viral proto-oncogene 2	AK144217|Akt2|11652|thymoma viral proto-oncogene 2	U22445|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr1_+_160292665_160292848	0.487129	NKX3-2.p2	AK147450|Astn1|11899|astrotactin 1	AK138576|Astn1|11899|astrotactin 1	AK045561|Astn1|11899|astrotactin 1	AK165200|Astn1|11899|astrotactin 1	U48797|Astn1|11899|astrotactin 1	AB093222|Astn1|11899|astrotactin 1
mm9_v1_chr4_+_154963369_154963462	0.48649	NKX3-2.p2	AK180033|Nadk|192185|NAD kinase
mm9_v1_chr17_+_34742803_34742908	0.486392	NKX3-2.p2	NM_001163379|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AB005623|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AK086281|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm9_v1_chr14_-_73762933_73762949	0.486036	NKX3-2.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr9_-_54349409_54349432	0.485756	NKX3-2.p2	AK170274|Dmxl2|235380|Dmx-like 2	AK048831|Dmxl2|235380|Dmx-like 2	AK053672|Dmxl2|235380|Dmx-like 2	NM_172771|Dmxl2|235380|Dmx-like 2
mm9_v1_chr1_+_173433762_173433787	0.485429	NKX3-2.p2	AJ252141|Refbp2|56009|RNA and export factor binding protein 2
mm9_v1_chrX_-_7709452_7709736	0.485138	NKX3-2.p2	AF513713|Wdr13|73447|WD repeat domain 13	BC125287|Wdr13|73447|WD repeat domain 13	BC120553|Wdr13|73447|WD repeat domain 13	AK017549|Wdr13|73447|WD repeat domain 13	AF353243|Wdr13|73447|WD repeat domain 13	BC037502|Wdr13|73447|WD repeat domain 13	BC108332|Wdr13|73447|WD repeat domain 13
mm9_v1_chr7_-_35015297_35015308	0.484726	NKX3-2.p2	BC086640|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr5_+_23907911_23908059	0.483967	NKX3-2.p2	AK212771|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr10_-_6979959_6980009	0.483955	NKX3-2.p2	BC055717|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr9_+_110146286_110146286	0.482884	NKX3-2.p2	AF461090|Cspg5|29873|chondroitin sulfate proteoglycan 5	AF461092|Cspg5|29873|chondroitin sulfate proteoglycan 5	NM_001166273|Cspg5|29873|chondroitin sulfate proteoglycan 5	NM_013884|Cspg5|29873|chondroitin sulfate proteoglycan 5
mm9_v1_chr8_-_88224652_88224792	0.482817	NKX3-2.p2	BC151050|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC157941|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC172104|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC172139|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	AK081462|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	AK017458|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2
mm9_v1_chr2_-_143814199_143814217	0.481555	NKX3-2.p2	AK019964|Rrbp1|81910|ribosome binding protein 1
mm9_v1_chr17_-_78817348_78817472	0.480692	NKX3-2.p2	BC064130|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK033547|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK165595|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC096619|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AY382580|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	NM_199448|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK159545|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK157221|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK150241|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC052366|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)
mm9_v1_chr9_-_99336923_99337150	0.480269	NKX3-2.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr3_-_104024291_104024328	0.480123	NKX3-2.p2	AK018328|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_001159354|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_133853|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3
mm9_v1_chr4_-_151235861_151235879	0.479622	NKX3-2.p2	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr1_+_169528838_169528848	0.479219	NKX3-2.p2	M84819|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr19_-_11410534_11410635	0.479073	NKX3-2.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr11_-_59005394_59005458	0.47791	NKX3-2.p2	NM_008193|Guk1|14923|guanylate kinase 1
mm9_v1_chr17_-_25036364_25036398	0.477023	NKX3-2.p2	BC004003|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3
mm9_v1_chr10_+_34018323_34018472	0.476455	NKX3-2.p2	AK028517|Tspyl4|72480|TSPY-like 4
mm9_v1_chr3_+_32428424_32428479	0.476431	NKX3-2.p2	AK046313|Mfn1|67414|mitofusin 1	BC056641|Mfn1|67414|mitofusin 1
mm9_v1_chr2_+_121274946_121274963	0.474427	NKX3-2.p2	NM_011354|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr12_-_105143089_105143106	0.474381	NKX3-2.p2	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr8_+_87604638_87604668	0.473483	NKX3-2.p2	AK147129|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr17_-_34161584_34161626	0.472391	NKX3-2.p2	AK154962|Ring1|19763|ring finger protein 1	BC009070|Ring1|19763|ring finger protein 1	AK155509|Ring1|19763|ring finger protein 1	NM_009066|Ring1|19763|ring finger protein 1
mm9_v1_chr1_+_173275837_173275844	0.471299	NKX3-2.p2	Y17393|Pfdn2|18637|prefoldin 2	BC026839|Pfdn2|18637|prefoldin 2
mm9_v1_chr9_+_7692089_7692096	0.469489	NKX3-2.p2	L36244|Mmp7|17393|matrix metallopeptidase 7	AK144515|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr8_+_125748717_125748786	0.466735	NKX3-2.p2	NM_194444|Cdk10|234854|cyclin-dependent kinase 10	NM_194446|Cdk10|234854|cyclin-dependent kinase 10	DQ288857|Cdk10|234854|cyclin-dependent kinase 10	BC017131|Cdk10|234854|cyclin-dependent kinase 10	AK144801|Cdk10|234854|cyclin-dependent kinase 10	AK170594|Cdk10|234854|cyclin-dependent kinase 10	BC052096|Cdk10|234854|cyclin-dependent kinase 10	BC023736|Cdk10|234854|cyclin-dependent kinase 10	AK133918|Cdk10|234854|cyclin-dependent kinase 10
mm9_v1_chr7_+_54110446_54110470	0.466714	NKX3-2.p2	AK190050|Ldha|16828|lactate dehydrogenase A	AK180599|Ldha|16828|lactate dehydrogenase A	AK185842|Ldha|16828|lactate dehydrogenase A	AK191965|Ldha|16828|lactate dehydrogenase A	AK201958|Ldha|16828|lactate dehydrogenase A	AK202966|Ldha|16828|lactate dehydrogenase A	AK204947|Ldha|16828|lactate dehydrogenase A	AK203463|Ldha|16828|lactate dehydrogenase A	AK204382|Ldha|16828|lactate dehydrogenase A	AK203623|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr14_-_49686341_49686379	0.466559	NKX3-2.p2	NM_207214|Exoc5|105504|exocyst complex component 5
mm9_v1_chr1_-_166237573_166237642	0.465726	NKX3-2.p2	AK029787|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160208|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160209|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_025505|Blzf1|66352|basic leucine zipper nuclear factor 1	AK006544|Blzf1|66352|basic leucine zipper nuclear factor 1	AK167493|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr3_+_95238292_95238339	0.465528	NKX3-2.p2	AK040475|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_001037737|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_009709|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK028546|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK153355|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK152473|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr2_-_131178551_131178627	0.464059	NKX3-2.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr1_+_75432535_75432608	0.463741	NKX3-2.p2	AK144311|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK150473|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK182835|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK198797|Gmppa|69080|GDP-mannose pyrophosphorylase A	BC008116|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr3_+_89856713_89856975	0.463726	NKX3-2.p2	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr17_+_46339730_46339822	0.46314	NKX3-2.p2	BC092371|Xpo5|72322|exportin 5	BC055455|Xpo5|72322|exportin 5	AK010389|Xpo5|72322|exportin 5	AF343581|Xpo5|72322|exportin 5	NM_028198|Xpo5|72322|exportin 5	BC131660|Xpo5|72322|exportin 5	BC131661|Xpo5|72322|exportin 5
mm9_v1_chr9_+_55056740_55056801	0.463089	NKX3-2.p2	NM_028049|Fbxo22|71999|F-box protein 22	AK002745|Fbxo22|71999|F-box protein 22	BC018273|Fbxo22|71999|F-box protein 22
mm9_v1_chr10_+_86984539_86984647	0.462677	NKX3-2.p2	NM_008777|Pah|18478|phenylalanine hydroxylase
mm9_v1_chr17_+_33980039_33980123	0.462441	NKX3-2.p2	AK140204|Cd320|54219|CD320 antigen	AK021187|Cd320|54219|CD320 antigen	BC026888|Cd320|54219|CD320 antigen
mm9_v1_chr5_+_32761426_32761470	0.460536	NKX3-2.p2	AK166168|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166623|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168141|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr7_-_148379844_148379932	0.459931	NKX3-2.p2	BC061885|Hras1|15461|Harvey rat sarcoma virus oncogene 1	BC050837|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130443|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130444|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_008284|Hras1|15461|Harvey rat sarcoma virus oncogene 1
mm9_v1_chr19_-_4877874_4877883	0.457809	NKX3-2.p2	BC111890|Actn3|11474|actinin alpha 3	AF093775|Actn3|11474|actinin alpha 3	NM_013456|Actn3|11474|actinin alpha 3
mm9_v1_chr11_+_85166665_85166722	0.457405	NKX3-2.p2	NM_001166642|Bcas3|192197|breast carcinoma amplified sequence 3	NM_001166643|Bcas3|192197|breast carcinoma amplified sequence 3	NM_138681|Bcas3|192197|breast carcinoma amplified sequence 3	AK034117|Bcas3|192197|breast carcinoma amplified sequence 3	AF313800|Bcas3|192197|breast carcinoma amplified sequence 3	BC050233|Bcas3|192197|breast carcinoma amplified sequence 3	AK160127|Bcas3|192197|breast carcinoma amplified sequence 3	BC028339|Bcas3|192197|breast carcinoma amplified sequence 3	BC086693|Bcas3|192197|breast carcinoma amplified sequence 3	BC060690|Bcas3|192197|breast carcinoma amplified sequence 3	AK171964|Bcas3|192197|breast carcinoma amplified sequence 3	AK032423|Bcas3|192197|breast carcinoma amplified sequence 3	AK157222|Bcas3|192197|breast carcinoma amplified sequence 3	BC038173|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr1_-_30861874_30861889	0.457085	NKX3-2.p2	AK086788|Phf3|213109|PHD finger protein 3
mm9_v1_chr12_-_113912266_113912513	0.456705	NKX3-2.p2	AK154936|Akt1|11651|thymoma viral proto-oncogene 1	AK040758|Akt1|11651|thymoma viral proto-oncogene 1	X65687|Akt1|11651|thymoma viral proto-oncogene 1	BC066018|Akt1|11651|thymoma viral proto-oncogene 1	NM_001165894|Akt1|11651|thymoma viral proto-oncogene 1	NM_009652|Akt1|11651|thymoma viral proto-oncogene 1
mm9_v1_chr17_-_79135885_79135936	0.455478	NKX3-2.p2	BC090968|Strn|268980|striatin, calmodulin binding protein	NM_011500|Strn|268980|striatin, calmodulin binding protein	AK051549|Strn|268980|striatin, calmodulin binding protein
mm9_v1_chr2_-_121890678_121890752	0.455444	NKX3-2.p2	BC019404|Spg11|214585|spastic paraplegia 11
mm9_v1_chr2_-_155755998_155756045	0.455195	NKX3-2.p2	BC050884|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	BC057570|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK139488|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	NM_018888|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr1_+_74283325_74283370	0.454246	NKX3-2.p2	BC115750|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr11_-_73137838_73138062	0.453954	NKX3-2.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr5_-_137510950_137511054	0.450411	NKX3-2.p2	AK192071|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr4_-_141430740_141430891	0.4486	NKX3-2.p2	AK150207|Efhd2|27984|EF hand domain containing 2	AK007560|Efhd2|27984|EF hand domain containing 2	AK011219|Efhd2|27984|EF hand domain containing 2	AK159367|Efhd2|27984|EF hand domain containing 2	AK169409|Efhd2|27984|EF hand domain containing 2	AK167267|Efhd2|27984|EF hand domain containing 2	AK048475|Efhd2|27984|EF hand domain containing 2	NM_025994|Efhd2|27984|EF hand domain containing 2	BC125303|Efhd2|27984|EF hand domain containing 2
mm9_v1_chr13_+_58909648_58909697	0.447839	NKX3-2.p2	BC052014|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr4_+_101390011_101390043	0.447729	NKX3-2.p2	NM_001122899|Lepr|16847|leptin receptor	NM_010704|Lepr|16847|leptin receptor	NM_146146|Lepr|16847|leptin receptor	U52915|Lepr|16847|leptin receptor
mm9_v1_chr6_+_134932018_134932018	0.446839	NKX3-2.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr16_+_90738690_90738714	0.445863	NKX3-2.p2	AK158113|Mrap|77037|melanocortin 2 receptor accessory protein	BC027543|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr18_+_57628139_57628180	0.445632	NKX3-2.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr4_-_75779379_75779379	0.445479	NKX3-2.p2	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr7_-_149562239_149562649	0.445086	NKX3-2.p2	AK180828|Ctsd|13033|cathepsin D	AK183526|Ctsd|13033|cathepsin D
mm9_v1_chr10_+_79321979_79322100	0.442952	NKX3-2.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr16_-_10543121_10543218	0.44287	NKX3-2.p2	BC017551|Dexi|58239|dexamethasone-induced transcript	AK007644|Dexi|58239|dexamethasone-induced transcript	AK032104|Dexi|58239|dexamethasone-induced transcript	NM_021428|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr2_-_68309996_68310080	0.44238	NKX3-2.p2	AK017292|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AF099988|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	BC064443|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	NM_016866|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AK148456|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr11_-_96691261_96691289	0.441844	NKX3-2.p2	AK152040|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK153529|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_008686|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr9_-_108499855_108499944	0.440092	NKX3-2.p2	AK016685|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK161992|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK038927|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK047714|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	BC111871|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	NM_028944|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK046783|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
mm9_v1_chr2_+_28048779_28048916	0.439844	NKX3-2.p2	AF028740|Olfm1|56177|olfactomedin 1
mm9_v1_chr15_+_58770843_58770951	0.439615	NKX3-2.p2	AJ300739|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm9_v1_chr6_-_83456775_83456962	0.439513	NKX3-2.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr3_-_80606704_80606756	0.438105	NKX3-2.p2	AK163941|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK046861|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001039195|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001083806|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_013540|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK014389|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr1_-_53009546_53009683	0.437404	NKX3-2.p2	AK010944|1700019D03Rik|67080|RIKEN cDNA 1700019D03 gene	AK010796|1700019D03Rik|67080|RIKEN cDNA 1700019D03 gene	NM_144953|1700019D03Rik|67080|RIKEN cDNA 1700019D03 gene
mm9_v1_chr2_+_19293231_19293294	0.437307	NKX3-2.p2	BC021619|Msrb2|76467|methionine sulfoxide reductase B2	NM_029619|Msrb2|76467|methionine sulfoxide reductase B2	AK009912|Msrb2|76467|methionine sulfoxide reductase B2
mm9_v1_chr15_-_75397601_75397641	0.436464	NKX3-2.p2	NM_011837|Ly6h|23934|lymphocyte antigen 6 complex, locus H
mm9_v1_chr7_+_133903118_133903185	0.436302	NKX3-2.p2	NM_011952|Mapk3|26417|mitogen-activated protein kinase 3	BC029712|Mapk3|26417|mitogen-activated protein kinase 3	Z14249|Mapk3|26417|mitogen-activated protein kinase 3
mm9_v1_chr10_+_72119562_72119594	0.436107	NKX3-2.p2	AK170637|Zwint|52696|ZW10 interactor
mm9_v1_chr8_+_86176531_86176611	0.435937	NKX3-2.p2	AK086506|Gipc1|67903|GIPC PDZ domain containing family, member 1	BC003490|Gipc1|67903|GIPC PDZ domain containing family, member 1	NM_018771|Gipc1|67903|GIPC PDZ domain containing family, member 1	AK002492|Gipc1|67903|GIPC PDZ domain containing family, member 1	AF104358|Gipc1|67903|GIPC PDZ domain containing family, member 1
mm9_v1_chr2_-_75776467_75776587	0.435915	NKX3-2.p2	AK147134|Ttc30b|72421|tetratricopeptide repeat domain 30B	AK011097|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151060|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151184|Ttc30b|72421|tetratricopeptide repeat domain 30B	NM_028235|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC157929|Ttc30b|72421|tetratricopeptide repeat domain 30B
mm9_v1_chr8_-_109417431_109417531	0.435421	NKX3-2.p2	AK030924|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK165993|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	NM_145412|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK087721|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK088257|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr19_-_7062118_7062180	0.435086	NKX3-2.p2	BC046303|Vegfb|22340|vascular endothelial growth factor B	AK148188|Vegfb|22340|vascular endothelial growth factor B	NM_001185164|Vegfb|22340|vascular endothelial growth factor B	NM_011697|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr5_+_93112640_93112650	0.432204	NKX3-2.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr14_-_119498586_119498663	0.431423	NKX3-2.p2	AK038817|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK052077|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	NM_001081252|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK048685|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2
mm9_v1_chr1_-_138856866_138857085	0.431208	NKX3-2.p2	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr11_-_55274614_55274713	0.430426	NKX3-2.p2	AF004591|Atox1|11927|ATX1 (antioxidant protein 1) homolog 1 (yeast)	BC027632|Atox1|11927|ATX1 (antioxidant protein 1) homolog 1 (yeast)	NM_009720|Atox1|11927|ATX1 (antioxidant protein 1) homolog 1 (yeast)	AK002432|Atox1|11927|ATX1 (antioxidant protein 1) homolog 1 (yeast)
mm9_v1_chr8_-_28338915_28339032	0.429034	NKX3-2.p2	AF193027|Adrb3|11556|adrenergic receptor, beta 3	BC132000|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr19_-_4477106_4477182	0.428419	NKX3-2.p2	AK083139|Syt12|171180|synaptotagmin XII	NM_134164|Syt12|171180|synaptotagmin XII
mm9_v1_chr14_+_34736806_34736957	0.427626	NKX3-2.p2	L42114|Gdf10|14560|growth differentiation factor 10	S82648|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr12_+_8681155_8681226	0.425812	NKX3-2.p2	AK122225|Pum2|80913|pumilio 2 (Drosophila)	AK141682|Pum2|80913|pumilio 2 (Drosophila)	AY027917|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr5_-_99466008_99466097	0.424661	NKX3-2.p2	BC113205|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK038739|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK081422|Prkg2|19092|protein kinase, cGMP-dependent, type II	NM_008926|Prkg2|19092|protein kinase, cGMP-dependent, type II
mm9_v1_chr18_+_82723854_82723899	0.424288	NKX3-2.p2	NM_001025251|Mbp|17196|myelin basic protein	NM_001025255|Mbp|17196|myelin basic protein	NM_001025256|Mbp|17196|myelin basic protein	NM_001025258|Mbp|17196|myelin basic protein	NM_001025259|Mbp|17196|myelin basic protein	AK079621|Mbp|17196|myelin basic protein	NM_001025254|Mbp|17196|myelin basic protein
mm9_v1_chrX_+_135448968_135449043	0.424198	NKX3-2.p2	NM_013724|Nrk|27206|Nik related kinase	AK041377|Nrk|27206|Nik related kinase	BC068311|Nrk|27206|Nik related kinase	AB020741|Nrk|27206|Nik related kinase
mm9_v1_chr2_+_34627607_34627658	0.424064	NKX3-2.p2	NM_001163434|Hspa5|14828|heat shock protein 5	NM_022310|Hspa5|14828|heat shock protein 5	AK077463|Hspa5|14828|heat shock protein 5	AK146647|Hspa5|14828|heat shock protein 5	AK148539|Hspa5|14828|heat shock protein 5	AK149447|Hspa5|14828|heat shock protein 5	AK151647|Hspa5|14828|heat shock protein 5	AK151806|Hspa5|14828|heat shock protein 5	AK152958|Hspa5|14828|heat shock protein 5	AK160821|Hspa5|14828|heat shock protein 5	AK168012|Hspa5|14828|heat shock protein 5	AK169034|Hspa5|14828|heat shock protein 5	AK004578|Hspa5|14828|heat shock protein 5	AK076079|Hspa5|14828|heat shock protein 5	AK144650|Hspa5|14828|heat shock protein 5	AK144742|Hspa5|14828|heat shock protein 5	AK152020|Hspa5|14828|heat shock protein 5	AK159719|Hspa5|14828|heat shock protein 5	AK166207|Hspa5|14828|heat shock protein 5	AK166739|Hspa5|14828|heat shock protein 5	AK167011|Hspa5|14828|heat shock protein 5	AK152521|Hspa5|14828|heat shock protein 5	AK168230|Hspa5|14828|heat shock protein 5	BC050927|Hspa5|14828|heat shock protein 5
mm9_v1_chr8_+_73053432_73053453	0.422539	NKX3-2.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr17_+_6138147_6138147	0.422402	NKX3-2.p2	AK173165|Tulp4|68842|tubby like protein 4	NM_054040|Tulp4|68842|tubby like protein 4
mm9_v1_chr6_-_125112509_125113407	0.422082	NKX3-2.p2	AK160495|Gm10481|433845|glyceraldehyde-3-phosphate dehydrogenase pseudogene	BC091736|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK178680|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK193664|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK193983|Gm5523|433273|glyceraldehyde-3-phosphate dehydrogenase pseudogene	AK200636|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK188672|Gm5523|433273|glyceraldehyde-3-phosphate dehydrogenase pseudogene	AK211452|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	DQ403054|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr15_-_36701729_36701849	0.421372	NKX3-2.p2	AK149013|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr15_+_102034075_102034116	0.421165	NKX3-2.p2	AK144707|Zfp740|68744|zinc finger protein 740	AK170207|Zfp740|68744|zinc finger protein 740
mm9_v1_chr5_-_143666425_143666452	0.419829	NKX3-2.p2	
mm9_v1_chr5_-_5265598_5265717	0.419687	NKX3-2.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr5_-_23218477_23218493	0.419295	NKX3-2.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr10_+_128242598_128242635	0.417962	NKX3-2.p2	AK168935|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK045445|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	BC011146|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr17_+_35035395_35035464	0.417961	NKX3-2.p2	BC058357|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077209|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_147151|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr14_+_66285235_66285241	0.417688	NKX3-2.p2	AK133176|Scara5|71145|scavenger receptor class A, member 5 (putative)	NM_001168318|Scara5|71145|scavenger receptor class A, member 5 (putative)	NM_028903|Scara5|71145|scavenger receptor class A, member 5 (putative)
mm9_v1_chr2_-_172765592_172765841	0.41736	NKX3-2.p2	AK020411|Bmp7|12162|bone morphogenetic protein 7	X56906|Bmp7|12162|bone morphogenetic protein 7	BC010771|Bmp7|12162|bone morphogenetic protein 7	NM_007557|Bmp7|12162|bone morphogenetic protein 7
mm9_v1_chr5_+_23870625_23870649	0.416717	NKX3-2.p2	AK158106|Nos3|18127|nitric oxide synthase 3, endothelial cell	AK077896|Nos3|18127|nitric oxide synthase 3, endothelial cell	NM_008713|Nos3|18127|nitric oxide synthase 3, endothelial cell	U53142|Nos3|18127|nitric oxide synthase 3, endothelial cell	BC052636|Nos3|18127|nitric oxide synthase 3, endothelial cell
mm9_v1_chr3_-_138738020_138738033	0.416597	NKX3-2.p2	BC011279|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr5_+_43907004_43907024	0.416382	NKX3-2.p2	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr4_+_139178802_139178820	0.41599	NKX3-2.p2	BC060650|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	NM_175438|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr9_-_21875784_21875847	0.414447	NKX3-2.p2	AY072705|Zfp653|319601|zinc finger protein 653	BC038037|Zfp653|319601|zinc finger protein 653	NM_177318|Zfp653|319601|zinc finger protein 653	AK171735|Zfp653|319601|zinc finger protein 653
mm9_v1_chr1_+_75233276_75233316	0.41363	NKX3-2.p2	NM_001159885|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr15_+_94374097_94374150	0.412298	NKX3-2.p2	BC051676|Irak4|266632|interleukin-1 receptor-associated kinase 4	AK139992|Irak4|266632|interleukin-1 receptor-associated kinase 4	AF445803|Irak4|266632|interleukin-1 receptor-associated kinase 4	AK028837|Irak4|266632|interleukin-1 receptor-associated kinase 4
mm9_v1_chr14_-_52640348_52640407	0.411851	NKX3-2.p2	BC096486|Zfp219|69890|zinc finger protein 219	AB063578|Zfp219|69890|zinc finger protein 219	NM_027248|Zfp219|69890|zinc finger protein 219
mm9_v1_chr5_+_108796754_108796809	0.410851	NKX3-2.p2	AK031816|Gm10419|100038441|predicted gene 10419
mm9_v1_chr2_-_25324650_25324661	0.410023	NKX3-2.p2	AK002382|Ptgds|19215|prostaglandin D2 synthase (brain)
mm9_v1_chr18_+_37839910_37840111	0.409976	NKX3-2.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr11_+_121098532_121098610	0.409745	NKX3-2.p2	NM_026272|Narf|67608|nuclear prelamin A recognition factor	AK076232|Narf|67608|nuclear prelamin A recognition factor	AK081305|Narf|67608|nuclear prelamin A recognition factor	AK013432|Narf|67608|nuclear prelamin A recognition factor	BC016090|Narf|67608|nuclear prelamin A recognition factor
mm9_v1_chr11_-_73138102_73138139	0.409618	NKX3-2.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr7_+_30955159_30955213	0.409528	NKX3-2.p2	AK142560|Gm5113|330503|predicted gene 5113
mm9_v1_chr5_+_114830615_114830615	0.409124	NKX3-2.p2	NM_054093|Ube3b|117146|ubiquitin protein ligase E3B
mm9_v1_chr11_-_100599413_100599524	0.409006	NKX3-2.p2	AK134691|Rab5c|19345|RAB5C, member RAS oncogene family	BC029678|Rab5c|19345|RAB5C, member RAS oncogene family	NM_024456|Rab5c|19345|RAB5C, member RAS oncogene family	BC023027|Rab5c|19345|RAB5C, member RAS oncogene family	AK172328|Rab5c|19345|RAB5C, member RAS oncogene family	AK159832|Rab5c|19345|RAB5C, member RAS oncogene family	AK167599|Rab5c|19345|RAB5C, member RAS oncogene family	AK089199|Rab5c|19345|RAB5C, member RAS oncogene family	AK170540|Rab5c|19345|RAB5C, member RAS oncogene family
mm9_v1_chr15_+_34236408_34236565	0.408548	NKX3-2.p2	AK035102|Matn2|17181|matrilin 2	NM_016762|Matn2|17181|matrilin 2	AK083151|Matn2|17181|matrilin 2	AK138211|Matn2|17181|matrilin 2	U69262|Matn2|17181|matrilin 2	AK163818|Matn2|17181|matrilin 2	AK081339|Matn2|17181|matrilin 2	BC092298|Matn2|17181|matrilin 2	BC005429|Matn2|17181|matrilin 2
mm9_v1_chr14_-_44501032_44501032	0.408138	NKX3-2.p2	NM_053112|Ear10|93725|eosinophil-associated, ribonuclease A family, member 10
mm9_v1_chr7_-_51562263_51562328	0.407747	NKX3-2.p2	AB009245|Clec11a|20256|C-type lectin domain family 11, member a	BC002001|Clec11a|20256|C-type lectin domain family 11, member a	NM_009131|Clec11a|20256|C-type lectin domain family 11, member a
mm9_v1_chr9_+_114597854_114597998	0.40727	NKX3-2.p2	AK082950|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	AK159702|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	BC023347|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	NM_146229|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1
mm9_v1_chr4_+_102787069_102787071	0.406652	NKX3-2.p2	BC043930|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	NM_027696|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK129405|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis
mm9_v1_chr7_-_109069245_109069287	0.406061	NKX3-2.p2	EU627089|Lrrc51|69358|leucine rich repeat containing 51	EU627090|Lrrc51|69358|leucine rich repeat containing 51	NM_001162974|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr14_-_55734213_55734388	0.406012	NKX3-2.p2	AY350744|Jph4|319984|junctophilin 4	BC052049|Jph4|319984|junctophilin 4	AK031092|Jph4|319984|junctophilin 4	NM_001003829|Jph4|319984|junctophilin 4	AK048607|Jph4|319984|junctophilin 4	AK148135|Jph4|319984|junctophilin 4
mm9_v1_chr6_+_86388648_86388705	0.405997	NKX3-2.p2	BC026926|C87436|232196|expressed sequence C87436	BC031913|C87436|232196|expressed sequence C87436
mm9_v1_chr12_+_25257147_25257167	0.405375	NKX3-2.p2	NM_001161406|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK167035|Grhl1|195733|grainyhead-like 1 (Drosophila)	BC037233|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK076307|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr1_-_89905074_89905142	0.405187	NKX3-2.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chrX_+_6154374_6154423	0.403346	NKX3-2.p2	AK052531|Shroom4|208431|shroom family member 4	AK173129|Shroom4|208431|shroom family member 4
mm9_v1_chr1_-_193220140_193220197	0.402303	NKX3-2.p2	
mm9_v1_chr3_-_142054771_142054814	0.401781	NKX3-2.p2	DQ177283|Pdlim5|56376|PDZ and LIM domain 5	HM369794|Pdlim5|56376|PDZ and LIM domain 5	HM369795|Pdlim5|56376|PDZ and LIM domain 5	HM369796|Pdlim5|56376|PDZ and LIM domain 5	HM369797|Pdlim5|56376|PDZ and LIM domain 5	HM369798|Pdlim5|56376|PDZ and LIM domain 5	NM_001190857|Pdlim5|56376|PDZ and LIM domain 5	NM_022554|Pdlim5|56376|PDZ and LIM domain 5	AB016587|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr7_-_140315100_140315165	0.401094	NKX3-2.p2	NM_009980|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr14_-_56778401_56778415	0.398493	NKX3-2.p2	J02872|Gzmg|14944|granzyme G	BC099473|Gzmg|14944|granzyme G	NM_010375|Gzmg|14944|granzyme G
mm9_v1_chr3_-_58329639_58329732	0.398298	NKX3-2.p2	AK167482|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK050508|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150809|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151323|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153056|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153118|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153286|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166052|Serp1|28146|stress-associated endoplasmic reticulum protein 1	BC002114|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151384|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166004|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150659|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152373|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152882|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153138|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK075776|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK144732|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151669|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152583|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153415|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169049|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK167952|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150005|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150025|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150368|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150770|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151853|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152383|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168569|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168754|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168947|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AB041655|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK032680|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK148485|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150428|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150714|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151456|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152636|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152806|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152996|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK159271|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK161595|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168046|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169175|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK170734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK002653|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK149786|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr10_-_79869505_79869569	0.397736	NKX3-2.p2	AK013513|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK146292|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK168974|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	BC034408|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK003443|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK167946|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	NM_025650|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI
mm9_v1_chr16_-_52268571_52268603	0.395146	NKX3-2.p2	AK161090|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr13_-_61107271_61107285	0.394367	NKX3-2.p2	AF136272|Ctsj|26898|cathepsin J	NM_012007|Ctsj|26898|cathepsin J	BC103769|Ctsj|26898|cathepsin J	AK005526|Ctsj|26898|cathepsin J	AK131661|Ctsj|26898|cathepsin J
mm9_v1_chr15_-_51697020_51697034	0.394189	NKX3-2.p2	AK146200|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167815|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK020033|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK088436|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167844|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168259|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168274|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC086915|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK160335|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168553|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK169416|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168108|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167928|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chr5_-_130363128_130363198	0.39337	NKX3-2.p2	BC083126|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	BC084682|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	BC069887|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	BC037682|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	BC042717|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	BC082287|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK145492|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK162133|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK160762|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK160779|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK166796|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK167593|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2	AK003399|Chchd2|14004|coiled-coil-helix-coiled-coil-helix domain containing 2
mm9_v1_chr4_+_45985143_45985279	0.393367	NKX3-2.p2	AK150077|Tdrd7|100121|tudor domain containing 7
mm9_v1_chr14_+_25309938_25309954	0.392785	NKX3-2.p2	AK002495|Rps24|20088|ribosomal protein S24	AK005358|Rps24|20088|ribosomal protein S24	AK007776|Rps24|20088|ribosomal protein S24	AK008386|Rps24|20088|ribosomal protein S24	AK009048|Rps24|20088|ribosomal protein S24	AK010856|Rps24|20088|ribosomal protein S24	AK018704|Rps24|20088|ribosomal protein S24	AK052480|Rps24|20088|ribosomal protein S24	BC086882|Rps24|20088|ribosomal protein S24	AK151111|Rps24|20088|ribosomal protein S24	AK049387|Rps24|20088|ribosomal protein S24	AK135247|Rps24|20088|ribosomal protein S24	AK012537|Rps24|20088|ribosomal protein S24	BC058817|Rps24|20088|ribosomal protein S24
mm9_v1_chr1_+_21230664_21230669	0.392384	NKX3-2.p2	NM_001077353|Gsta3|14859|glutathione S-transferase, alpha 3	NM_010356|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr7_-_74879894_74880008	0.392092	NKX3-2.p2	BC042785|Synm|233335|synemin, intermediate filament protein
mm9_v1_chr19_-_55177562_55177604	0.392063	NKX3-2.p2	AK047295|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	AK173202|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr7_-_108043203_108043229	0.391148	NKX3-2.p2	AK122250|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr8_-_64238879_64238894	0.389808	NKX3-2.p2	AK031696|Palld|72333|palladin, cytoskeletal associated protein	AK162050|Palld|72333|palladin, cytoskeletal associated protein	AK087270|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr8_-_125135240_125135386	0.389033	NKX3-2.p2	BC004002|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK220245|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK033946|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AF111346|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK159592|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_001193645|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_016722|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase
mm9_v1_chr11_+_105153956_105154033	0.388511	NKX3-2.p2	AK054150|Mrc2|17534|mannose receptor, C type 2	NM_008626|Mrc2|17534|mannose receptor, C type 2	AK028157|Mrc2|17534|mannose receptor, C type 2	U56734|Mrc2|17534|mannose receptor, C type 2	BC116642|Mrc2|17534|mannose receptor, C type 2
mm9_v1_chr11_+_77992183_77992219	0.388413	NKX3-2.p2	BC039182|Tlcd1|68385|TLC domain containing 1	AK165432|Tlcd1|68385|TLC domain containing 1
mm9_v1_chr9_+_120401824_120401871	0.387922	NKX3-2.p2	BC030319|Eif1b|68969|eukaryotic translation initiation factor 1B
mm9_v1_chr15_-_95358306_95358472	0.387919	NKX3-2.p2	BC051968|Nell2|54003|NEL-like 2 (chicken)
mm9_v1_chr6_+_60894310_60894310	0.387535	NKX3-2.p2	NM_001163507|Mmrn1|70945|multimerin 1	NM_027613|Mmrn1|70945|multimerin 1
mm9_v1_chr15_+_66723067_66723074	0.386836	NKX3-2.p2	AF100777|Wisp1|22402|WNT1 inducible signaling pathway protein 1
mm9_v1_chr7_+_52955569_52955641	0.38653	NKX3-2.p2	AB079601|Car11|12348|carbonic anhydrase 11
mm9_v1_chr14_-_104243541_104243687	0.386236	NKX3-2.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr3_+_13471681_13471721	0.385821	NKX3-2.p2	AK079659|Ralyl|76897|RALY RNA binding protein-like	AK032086|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr4_-_122563299_122563313	0.3857	NKX3-2.p2	AK154002|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)
mm9_v1_chr12_-_106103285_106103341	0.385514	NKX3-2.p2	AB047978|Clmn|94040|calmin	AB059643|Clmn|94040|calmin	AB059644|Clmn|94040|calmin	AB059645|Clmn|94040|calmin	AB059646|Clmn|94040|calmin	AB059647|Clmn|94040|calmin	AB059648|Clmn|94040|calmin	NM_001040682|Clmn|94040|calmin	NM_053155|Clmn|94040|calmin
mm9_v1_chr9_+_110921791_110921833	0.384182	NKX3-2.p2	AK036491|Ltf|17002|lactotransferrin	AK144556|Ltf|17002|lactotransferrin	AK150799|Ltf|17002|lactotransferrin	AK151822|Ltf|17002|lactotransferrin	AK164781|Ltf|17002|lactotransferrin	D88510|Ltf|17002|lactotransferrin	NM_008522|Ltf|17002|lactotransferrin	BC008530|Ltf|17002|lactotransferrin	AY792500|Ltf|17002|lactotransferrin	CT010339|Ltf|17002|lactotransferrin	FJ538998|Ltf|17002|lactotransferrin	J03298|Ltf|17002|lactotransferrin
mm9_v1_chr17_+_64950988_64951003	0.382935	NKX3-2.p2	NM_008549|Man2a1|17158|mannosidase 2, alpha 1	X61172|Man2a1|17158|mannosidase 2, alpha 1	BC138371|Man2a1|17158|mannosidase 2, alpha 1	BC138372|Man2a1|17158|mannosidase 2, alpha 1
mm9_v1_chr5_+_136559785_136559909	0.381505	NKX3-2.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr5_+_111759771_111759826	0.381459	NKX3-2.p2	AK028235|Pitpnb|56305|phosphatidylinositol transfer protein, beta	NM_019640|Pitpnb|56305|phosphatidylinositol transfer protein, beta	U46934|Pitpnb|56305|phosphatidylinositol transfer protein, beta	BC034676|Pitpnb|56305|phosphatidylinositol transfer protein, beta
mm9_v1_chr5_-_66542161_66542216	0.381269	NKX3-2.p2	AK035620|Rbm47|245945|RNA binding motif protein 47	AK142584|Rbm47|245945|RNA binding motif protein 47	AK085733|Rbm47|245945|RNA binding motif protein 47	NM_178446|Rbm47|245945|RNA binding motif protein 47	BC112902|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr2_-_30329717_30329736	0.379344	NKX3-2.p2	BC003464|Ier5l|72500|immediate early response 5-like	BC010234|Ier5l|72500|immediate early response 5-like	BC040084|Ier5l|72500|immediate early response 5-like	NM_030244|Ier5l|72500|immediate early response 5-like	AK012145|Ier5l|72500|immediate early response 5-like
mm9_v1_chr4_-_58219368_58219467	0.378363	NKX3-2.p2	AK052699|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AF206329|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_022814|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr15_-_96861590_96861647	0.37597	NKX3-2.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr14_+_120724380_120724561	0.375921	NKX3-2.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr7_+_30023368_30023534	0.375098	NKX3-2.p2	AK020444|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr11_-_30000031_30000152	0.375057	NKX3-2.p2	AK079934|Spnb2|20742|spectrin beta 2
mm9_v1_chr7_-_134028184_134028216	0.374986	NKX3-2.p2	BC085152|Taok2|381921|TAO kinase 2	AK031190|Taok2|381921|TAO kinase 2
mm9_v1_chr11_-_118770859_118770872	0.374787	NKX3-2.p2	AK049926|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	AK160816|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	AK086669|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3
mm9_v1_chr8_+_87561055_87561132	0.374702	NKX3-2.p2	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr11_+_95275577_95275627	0.374491	NKX3-2.p2	BC043131|Spop|20747|speckle-type POZ protein
mm9_v1_chr2_+_109516053_109516053	0.373099	NKX3-2.p2	AY057909|Bdnf|12064|brain derived neurotrophic factor	AY057910|Bdnf|12064|brain derived neurotrophic factor	AY057911|Bdnf|12064|brain derived neurotrophic factor	EF125670|Bdnf|12064|brain derived neurotrophic factor	EF125671|Bdnf|12064|brain derived neurotrophic factor	EF125672|Bdnf|12064|brain derived neurotrophic factor	NM_001048139|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr16_+_48816968_48817099	0.373043	NKX3-2.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr9_-_55360042_55360055	0.372721	NKX3-2.p2	AK028118|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	NM_145615|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr19_-_11049134_11049159	0.372278	NKX3-2.p2	AK008019|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10	AB026046|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10	BC144935|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10	BC150675|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10	AF237918|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10	NM_023529|Ms4a10|69826|membrane-spanning 4-domains, subfamily A, member 10
mm9_v1_chr6_-_34126949_34127110	0.372175	NKX3-2.p2	AK042150|Slc35b4|58246|solute carrier family 35, member B4	AK029046|Slc35b4|58246|solute carrier family 35, member B4	BC033512|Slc35b4|58246|solute carrier family 35, member B4	AK033913|Slc35b4|58246|solute carrier family 35, member B4	BC016275|Slc35b4|58246|solute carrier family 35, member B4	AK045791|Slc35b4|58246|solute carrier family 35, member B4	AK138591|Slc35b4|58246|solute carrier family 35, member B4	AB041549|Slc35b4|58246|solute carrier family 35, member B4	NM_021435|Slc35b4|58246|solute carrier family 35, member B4	AK029969|Slc35b4|58246|solute carrier family 35, member B4
mm9_v1_chr13_-_12199109_12199211	0.371908	NKX3-2.p2	BC043140|Ryr2|20191|ryanodine receptor 2, cardiac	BC059061|Ryr2|20191|ryanodine receptor 2, cardiac	NM_023868|Ryr2|20191|ryanodine receptor 2, cardiac
mm9_v1_chr11_-_68770359_68770398	0.370638	NKX3-2.p2	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr9_-_86589782_86589994	0.370547	NKX3-2.p2	M26756|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC094028|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC080660|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC003287|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK004980|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK077968|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	J02652|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC011081|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_008615|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr15_+_80808238_80808277	0.370154	NKX3-2.p2	AY382616|Sgsm3|105835|small G protein signaling modulator 3	AK166391|Sgsm3|105835|small G protein signaling modulator 3	AK164757|Sgsm3|105835|small G protein signaling modulator 3	BC025561|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr3_-_92452189_92452230	0.369811	NKX3-2.p2	BC146002|Lce1a1|67127|late cornified envelope 1A1	BC108406|Lce1a1|67127|late cornified envelope 1A1	AK009102|Lce1a1|67127|late cornified envelope 1A1	AK008643|Lce1a1|67127|late cornified envelope 1A1	NM_025984|Lce1a1|67127|late cornified envelope 1A1
mm9_v1_chr7_+_85928194_85928291	0.369752	NKX3-2.p2	AK002993|Mrps11|67994|mitochondrial ribosomal protein S11	AK152027|Mrps11|67994|mitochondrial ribosomal protein S11	AK166241|Mrps11|67994|mitochondrial ribosomal protein S11	BC028279|Mrps11|67994|mitochondrial ribosomal protein S11	AK160207|Mrps11|67994|mitochondrial ribosomal protein S11	BC005701|Mrps11|67994|mitochondrial ribosomal protein S11	AB049945|Mrps11|67994|mitochondrial ribosomal protein S11
mm9_v1_chr11_+_69980275_69980291	0.368903	NKX3-2.p2	NM_010796|Clec10a|17312|C-type lectin domain family 10, member A	S36676|Clec10a|17312|C-type lectin domain family 10, member A	BC014811|Clec10a|17312|C-type lectin domain family 10, member A
mm9_v1_chr16_-_15594609_15594629	0.367221	NKX3-2.p2	NM_001159351|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	NM_023585|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2
mm9_v1_chr2_+_74536666_74536675	0.366693	NKX3-2.p2	AK144746|Hoxd9|15438|homeobox D9
mm9_v1_chr2_+_32087125_32087136	0.366536	NKX3-2.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr1_+_94728217_94728298	0.365546	NKX3-2.p2	AK154899|Gpc1|14733|glypican 1	AF185613|Gpc1|14733|glypican 1	NM_016696|Gpc1|14733|glypican 1
mm9_v1_chr12_+_75098739_75098790	0.365514	NKX3-2.p2	AK137129|Syt16|238266|synaptotagmin XVI	AK032606|Syt16|238266|synaptotagmin XVI	NM_172804|Syt16|238266|synaptotagmin XVI
mm9_v1_chr6_-_38825815_38825951	0.365064	NKX3-2.p2	AF333791|Hipk2|15258|homeodomain interacting protein kinase 2	AF333792|Hipk2|15258|homeodomain interacting protein kinase 2	AF273680|Hipk2|15258|homeodomain interacting protein kinase 2	BC031904|Hipk2|15258|homeodomain interacting protein kinase 2	AF170301|Hipk2|15258|homeodomain interacting protein kinase 2	AF170302|Hipk2|15258|homeodomain interacting protein kinase 2	AF077659|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr1_-_63223190_63223282	0.364543	NKX3-2.p2	BC015300|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK166604|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK078590|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK167705|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK146814|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK036926|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK142711|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	BC006660|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr7_-_19857121_19857189	0.364107	NKX3-2.p2	BC015289|Vasp|22323|vasodilator-stimulated phosphoprotein	AK170780|Vasp|22323|vasodilator-stimulated phosphoprotein	AK150103|Vasp|22323|vasodilator-stimulated phosphoprotein	AK155480|Vasp|22323|vasodilator-stimulated phosphoprotein	AK140329|Vasp|22323|vasodilator-stimulated phosphoprotein	AK157021|Vasp|22323|vasodilator-stimulated phosphoprotein	AK171302|Vasp|22323|vasodilator-stimulated phosphoprotein	AK171715|Vasp|22323|vasodilator-stimulated phosphoprotein	AF084548|Vasp|22323|vasodilator-stimulated phosphoprotein
mm9_v1_chr18_+_75165496_75165648	0.363856	NKX3-2.p2	AK077642|BC031181|407819|cDNA sequence BC031181	BC016084|BC031181|407819|cDNA sequence BC031181	NM_001001181|BC031181|407819|cDNA sequence BC031181	AK131658|BC031181|407819|cDNA sequence BC031181	BC031181|BC031181|407819|cDNA sequence BC031181	BC027819|BC031181|407819|cDNA sequence BC031181	AK180483|BC031181|407819|cDNA sequence BC031181	AK187367|BC031181|407819|cDNA sequence BC031181
mm9_v1_chr9_+_56266415_56266485	0.363686	NKX3-2.p2	AK017716|Hmg20a|66867|high mobility group 20A	AK129010|Hmg20a|66867|high mobility group 20A	AK134213|Hmg20a|66867|high mobility group 20A
mm9_v1_chr6_+_41252267_41252289	0.362455	NKX3-2.p2	AK003064|Try4|22074|trypsin 4	AK008660|Try4|22074|trypsin 4	AK008667|Try4|22074|trypsin 4	BC061135|Try4|22074|trypsin 4	NM_011646|Try4|22074|trypsin 4	BC050120|Try4|22074|trypsin 4
mm9_v1_chr3_-_122737855_122737904	0.362149	NKX3-2.p2	AK003634|Myoz2|59006|myozenin 2	AJ252148|Myoz2|59006|myozenin 2	BC024360|Myoz2|59006|myozenin 2	AY013296|Myoz2|59006|myozenin 2	AK085927|Myoz2|59006|myozenin 2	NM_021503|Myoz2|59006|myozenin 2
mm9_v1_chr7_+_53039094_53039107	0.36064	NKX3-2.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr19_-_7066761_7066761	0.360568	NKX3-2.p2	AF036875|Dnajc4|57431|DnaJ (Hsp40) homolog, subfamily C, member 4	NM_020566|Dnajc4|57431|DnaJ (Hsp40) homolog, subfamily C, member 4
mm9_v1_chr7_-_52147628_52147748	0.359595	NKX3-2.p2	AK209813|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK089940|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	NM_029365|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm9_v1_chr6_+_113421480_113421500	0.359085	NKX3-2.p2	BC004759|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr10_-_108447996_108448001	0.357271	NKX3-2.p2	AK013798|Syt1|20979|synaptotagmin I	AK078790|Syt1|20979|synaptotagmin I
mm9_v1_chr6_+_30491641_30491643	0.356947	NKX3-2.p2	NM_001024698|Cpa2|232680|carboxypeptidase A2, pancreatic
mm9_v1_chr1_+_75233028_75233040	0.356816	NKX3-2.p2	AK156083|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	BC085162|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr3_+_129235336_129235458	0.356266	NKX3-2.p2	AK167373|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AB072039|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC040097|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC100576|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AF480860|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK165847|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC098492|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr5_-_17355533_17355611	0.355006	NKX3-2.p2	AK172162|Cd36|12491|CD36 antigen	BC010262|Cd36|12491|CD36 antigen	AK150648|Cd36|12491|CD36 antigen	NM_001159556|Cd36|12491|CD36 antigen	NM_001159557|Cd36|12491|CD36 antigen
mm9_v1_chr16_-_10993155_10993281	0.354847	NKX3-2.p2	AK159533|Litaf|56722|LPS-induced TN factor	AF171100|Litaf|56722|LPS-induced TN factor	BC018559|Litaf|56722|LPS-induced TN factor	AK018578|Litaf|56722|LPS-induced TN factor	AK078708|Litaf|56722|LPS-induced TN factor	AK151053|Litaf|56722|LPS-induced TN factor	NM_019980|Litaf|56722|LPS-induced TN factor	AK076162|Litaf|56722|LPS-induced TN factor
mm9_v1_chr8_-_72662994_72663095	0.35448	NKX3-2.p2	AF123704|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	L43164|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AF094761|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK146148|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK087462|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK052298|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_001025589|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_011266|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein
mm9_v1_chr12_-_3309404_3309739	0.354447	NKX3-2.p2	AK195457|Rab10|19325|RAB10, member RAS oncogene family	AB232604|Rab10|19325|RAB10, member RAS oncogene family	CT010394|Rab10|19325|RAB10, member RAS oncogene family	AK150384|Rab10|19325|RAB10, member RAS oncogene family	AK151473|Rab10|19325|RAB10, member RAS oncogene family	AF035646|Rab10|19325|RAB10, member RAS oncogene family
mm9_v1_chr10_-_59079439_59079481	0.352907	NKX3-2.p2	AK144727|Ccdc109a|215999|coiled-coil domain containing 109A	NM_001033259|Ccdc109a|215999|coiled-coil domain containing 109A
mm9_v1_chr16_+_34921598_34921714	0.351617	NKX3-2.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr3_+_13946371_13946410	0.350274	NKX3-2.p2	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr3_-_81949667_81949798	0.350211	NKX3-2.p2	BC057327|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK031305|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK028558|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK004815|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AF297082|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	NM_021896|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3
mm9_v1_chr7_-_134351860_134352145	0.349618	NKX3-2.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr10_+_12810660_12810714	0.349574	NKX3-2.p2	X95503|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr18_+_65048630_65048682	0.348989	NKX3-2.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr8_-_47292973_47292977	0.348568	NKX3-2.p2	AK186988|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chr5_+_32761471_32761527	0.348354	NKX3-2.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr14_-_56364390_56364415	0.34818	NKX3-2.p2	AK003958|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr11_-_119959959_119959998	0.347799	NKX3-2.p2	BC094318|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC049110|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC064313|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene
mm9_v1_chr18_+_31963757_31963829	0.347747	NKX3-2.p2	BC030076|Wdr33|74320|WD repeat domain 33	BC011156|Wdr33|74320|WD repeat domain 33	BC064745|Wdr33|74320|WD repeat domain 33
mm9_v1_chr11_-_106576464_106576537	0.347512	NKX3-2.p2	L06039|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr19_+_12040311_12040373	0.346959	NKX3-2.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chrX_-_96085778_96085963	0.345731	NKX3-2.p2	AK046214|Ophn1|94190|oligophrenin 1	AK087469|Ophn1|94190|oligophrenin 1	AK028822|Ophn1|94190|oligophrenin 1	AK077982|Ophn1|94190|oligophrenin 1	AK032500|Ophn1|94190|oligophrenin 1	AK082551|Ophn1|94190|oligophrenin 1
mm9_v1_chr3_+_88383528_88383608	0.345547	NKX3-2.p2	AK005340|Ssr2|66256|signal sequence receptor, beta	AK010565|Ssr2|66256|signal sequence receptor, beta	AK084530|Ssr2|66256|signal sequence receptor, beta	AK020145|Ssr2|66256|signal sequence receptor, beta	AK012281|Ssr2|66256|signal sequence receptor, beta	AK050505|Ssr2|66256|signal sequence receptor, beta	NM_025448|Ssr2|66256|signal sequence receptor, beta	BC010214|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr3_+_95238406_95238462	0.345517	NKX3-2.p2	AK141362|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U10325|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U14333|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr14_-_56364421_56364522	0.344647	NKX3-2.p2	BC003930|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	BC023825|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK159964|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK146317|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168147|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168115|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	NM_026819|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr5_+_137463446_137463548	0.344615	NKX3-2.p2	AK088948|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AF046783|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chrX_+_69062091_69062188	0.344401	NKX3-2.p2	NM_001081356|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049488|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK138582|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK011632|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK008848|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK045401|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK164163|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AJ748652|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC094639|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049296|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC028317|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
mm9_v1_chr14_-_65035722_65035811	0.344312	NKX3-2.p2	AK018338|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr3_-_87689483_87689550	0.343635	NKX3-2.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr6_+_115803545_115803666	0.343533	NKX3-2.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr3_+_92796138_92796147	0.342559	NKX3-2.p2	BC060281|Lce3f|69520|late cornified envelope 3F	NM_001018079|Lce3f|69520|late cornified envelope 3F
mm9_v1_chr14_+_55050530_55050726	0.341558	NKX3-2.p2	X83536|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK149988|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	DQ249870|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK198018|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)
mm9_v1_chr8_-_118230771_118230819	0.341112	NKX3-2.p2	AK132165|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	NM_001025577|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr1_-_156993820_156993943	0.341104	NKX3-2.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr6_+_85865746_85865786	0.339658	NKX3-2.p2	BC024858|Tprkb|69786|Tp53rk binding protein	AK188541|Tprkb|69786|Tp53rk binding protein
mm9_v1_chr11_+_43247209_43247232	0.339452	NKX3-2.p2	NM_148673|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	NM_198936|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr4_-_155159937_155159982	0.339363	NKX3-2.p2	BC147318|Tmem88b|320587|transmembrane protein 88B	BC147319|Tmem88b|320587|transmembrane protein 88B	AK035998|Tmem88b|320587|transmembrane protein 88B	AK158459|Tmem88b|320587|transmembrane protein 88B	NM_001033394|Tmem88b|320587|transmembrane protein 88B
mm9_v1_chr16_-_23029138_23029145	0.339283	NKX3-2.p2	BC108335|Kng2|385643|kininogen 2
mm9_v1_chr7_-_142720274_142720338	0.339252	NKX3-2.p2	AK085267|Clrn3|212070|clarin 3	AK033715|Clrn3|212070|clarin 3	BC036176|Clrn3|212070|clarin 3	AK146608|Clrn3|212070|clarin 3	NM_178669|Clrn3|212070|clarin 3
mm9_v1_chr6_+_34362388_34362389	0.338723	NKX3-2.p2	BC086929|Akr1b7|11997|aldo-keto reductase family 1, member B7	J05663|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr14_+_58143613_58143864	0.338177	NKX3-2.p2	AK131917|Il17d|239114|interleukin 17D	NM_145837|Il17d|239114|interleukin 17D	AF458063|Il17d|239114|interleukin 17D
mm9_v1_chrX_-_103414967_103414990	0.337697	NKX3-2.p2	BC066223|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC051635|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr19_+_4231936_4231998	0.337679	NKX3-2.p2	AK010477|Pold4|69745|polymerase (DNA-directed), delta 4	BC028520|Pold4|69745|polymerase (DNA-directed), delta 4	AF515709|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr11_-_96691198_96691257	0.337634	NKX3-2.p2	AK131183|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	BC099895|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr1_-_25886551_25886551	0.337585	NKX3-2.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr9_-_44543245_44543320	0.337211	NKX3-2.p2	BC058712|Phldb1|102693|pleckstrin homology-like domain, family B, member 1	NM_153537|Phldb1|102693|pleckstrin homology-like domain, family B, member 1
mm9_v1_chr17_-_46168654_46168719	0.336638	NKX3-2.p2	AY707864|Vegfa|22339|vascular endothelial growth factor A	AY750956|Vegfa|22339|vascular endothelial growth factor A	AY750957|Vegfa|22339|vascular endothelial growth factor A	EF028705|Vegfa|22339|vascular endothelial growth factor A	BC061468|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr1_-_75274936_75275038	0.336543	NKX3-2.p2	L34214|Resp18|19711|regulated endocrine-specific protein 18	NM_009049|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr15_+_101974978_101975063	0.334689	NKX3-2.p2	CT010184|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr12_+_112783003_112783121	0.333647	NKX3-2.p2	AK218038|Eif5|217869|eukaryotic translation initiation factor 5
mm9_v1_chr2_+_104966685_104966779	0.332978	NKX3-2.p2	M55512|Wt1|22431|Wilms tumor 1 homolog	NM_144783|Wt1|22431|Wilms tumor 1 homolog
mm9_v1_chr1_+_174271338_174271373	0.332326	NKX3-2.p2	AK048864|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	NM_001039484|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr6_+_83028337_83028383	0.332238	NKX3-2.p2	BC028560|Pcgf1|69837|polycomb group ring finger 1	NM_197992|Pcgf1|69837|polycomb group ring finger 1
mm9_v1_chr9_-_105397342_105397452	0.331488	NKX3-2.p2	AK032255|Atp2c1|235574|ATPase, Ca++-sequestering	AK028393|Atp2c1|235574|ATPase, Ca++-sequestering	BC043706|Atp2c1|235574|ATPase, Ca++-sequestering	AK159918|Atp2c1|235574|ATPase, Ca++-sequestering	AK163049|Atp2c1|235574|ATPase, Ca++-sequestering	BC043091|Atp2c1|235574|ATPase, Ca++-sequestering	AK052958|Atp2c1|235574|ATPase, Ca++-sequestering	NM_175025|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr3_-_88182614_88182620	0.331097	NKX3-2.p2	BC145564|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	X04142|Bglap2|12097|bone gamma-carboxyglutamate protein 2	NM_001032298|Bglap2|12097|bone gamma-carboxyglutamate protein 2
mm9_v1_chr5_-_66542128_66542136	0.33082	NKX3-2.p2	AK089362|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr4_-_61100653_61100734	0.330405	NKX3-2.p2	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr7_-_87377430_87377540	0.329428	NKX3-2.p2	AF173010|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AB006463|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK165472|Cib1|23991|calcium and integrin binding 1 (calmyrin)	BC003714|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK010345|Cib1|23991|calcium and integrin binding 1 (calmyrin)	BC054385|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK027915|Cib1|23991|calcium and integrin binding 1 (calmyrin)	NM_011870|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK088450|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK152805|Cib1|23991|calcium and integrin binding 1 (calmyrin)
mm9_v1_chr2_-_102241003_102241049	0.32907	NKX3-2.p2	AJ249129|Trim44|80985|tripartite motif-containing 44	BC098369|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr3_-_94819344_94819383	0.328904	NKX3-2.p2	BC056943|Zfp687|78266|zinc finger protein 687	BC060179|Zfp687|78266|zinc finger protein 687
mm9_v1_chrX_+_20427050_20427089	0.32862	NKX3-2.p2	AB158252|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr2_-_30758745_30758791	0.328392	NKX3-2.p2	AB035323|Ptges|64292|prostaglandin E synthase	BC024960|Ptges|64292|prostaglandin E synthase	AK172621|Ptges|64292|prostaglandin E synthase	AK010757|Ptges|64292|prostaglandin E synthase	AK033752|Ptges|64292|prostaglandin E synthase	AB041997|Ptges|64292|prostaglandin E synthase
mm9_v1_chr2_-_11423651_11423672	0.328262	NKX3-2.p2	AF294617|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK154607|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC057320|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm9_v1_chr19_-_6084874_6084960	0.32822	NKX3-2.p2	BC002119|Zfpl1|81909|zinc finger like protein 1	NM_024231|Zfpl1|81909|zinc finger like protein 1	AK005244|Zfpl1|81909|zinc finger like protein 1
mm9_v1_chr11_+_93905501_93905545	0.327819	NKX3-2.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr5_+_43993160_43993160	0.327584	NKX3-2.p2	BC038308|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	DQ002400|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_175425|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr17_+_35400049_35400051	0.326898	NKX3-2.p2	X52490|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr17_-_24664876_24664899	0.325837	NKX3-2.p2	NM_001172113|Traf7|224619|TNF receptor-associated factor 7	NM_001172114|Traf7|224619|TNF receptor-associated factor 7	NM_153792|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr5_-_34000546_34000589	0.325669	NKX3-2.p2	AK172044|Tmem129|68366|transmembrane protein 129
mm9_v1_chr10_+_56107352_56107416	0.325638	NKX3-2.p2	CT010327|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr2_+_24909898_24909973	0.325405	NKX3-2.p2	NM_001039386|Nelf|56876|nasal embryonic LHRH factor	NM_001039387|Nelf|56876|nasal embryonic LHRH factor	NM_001177654|Nelf|56876|nasal embryonic LHRH factor	NM_001177655|Nelf|56876|nasal embryonic LHRH factor	NM_020276|Nelf|56876|nasal embryonic LHRH factor	AK004986|Nelf|56876|nasal embryonic LHRH factor	AK041478|Nelf|56876|nasal embryonic LHRH factor	AK158803|Nelf|56876|nasal embryonic LHRH factor	AF266508|Nelf|56876|nasal embryonic LHRH factor	AK019560|Nelf|56876|nasal embryonic LHRH factor	BC006642|Nelf|56876|nasal embryonic LHRH factor	AK053402|Nelf|56876|nasal embryonic LHRH factor	AK165300|Nelf|56876|nasal embryonic LHRH factor
mm9_v1_chr3_-_94819118_94819164	0.325317	NKX3-2.p2	AK133173|Zfp687|78266|zinc finger protein 687	AK019851|Zfp687|78266|zinc finger protein 687	NM_030074|Zfp687|78266|zinc finger protein 687
mm9_v1_chr4_-_134091164_134091245	0.324481	NKX3-2.p2	AK080126|Fam54b|76824|family with sequence similarity 54, member B	AK010825|Fam54b|76824|family with sequence similarity 54, member B	AK089141|Fam54b|76824|family with sequence similarity 54, member B	AK145362|Fam54b|76824|family with sequence similarity 54, member B	AK171703|Fam54b|76824|family with sequence similarity 54, member B	AK169047|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr13_+_3537514_3537611	0.324074	NKX3-2.p2	L36314|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr3_-_95032039_95032230	0.323918	NKX3-2.p2	BC022963|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK046005|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	U95498|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AB000733|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK158495|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr1_+_75233046_75233098	0.323383	NKX3-2.p2	AK171494|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	AK076061|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr7_+_120909680_120909687	0.323249	NKX3-2.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr7_-_56099011_56099046	0.323173	NKX3-2.p2	BC061131|Csrp3|13009|cysteine and glycine-rich protein 3	NM_013808|Csrp3|13009|cysteine and glycine-rich protein 3
mm9_v1_chr7_-_135441602_135441616	0.323067	NKX3-2.p2	BC094040|BC017158|233913|cDNA sequence BC017158	AK154566|BC017158|233913|cDNA sequence BC017158	BC017158|BC017158|233913|cDNA sequence BC017158
mm9_v1_chrX_+_71528035_71528145	0.323023	NKX3-2.p2	NM_001173547|Taz|66826|tafazzin	NM_181516|Taz|66826|tafazzin	AK172563|Taz|66826|tafazzin	AK019872|Taz|66826|tafazzin	AK076481|Taz|66826|tafazzin	AK160327|Taz|66826|tafazzin	AK170662|Taz|66826|tafazzin	AK004035|Taz|66826|tafazzin	AK075615|Taz|66826|tafazzin	BC015305|Taz|66826|tafazzin
mm9_v1_chr4_-_43013217_43013384	0.322832	NKX3-2.p2	AK149931|Vcp|269523|valosin containing protein	AK151109|Vcp|269523|valosin containing protein	AK151418|Vcp|269523|valosin containing protein	AK146109|Vcp|269523|valosin containing protein	AK169140|Vcp|269523|valosin containing protein	BC043053|Vcp|269523|valosin containing protein	AK028264|Vcp|269523|valosin containing protein	AK159475|Vcp|269523|valosin containing protein	AK159177|Vcp|269523|valosin containing protein	AK153012|Vcp|269523|valosin containing protein	AK167794|Vcp|269523|valosin containing protein	BC049114|Vcp|269523|valosin containing protein	AK153249|Vcp|269523|valosin containing protein	AK159509|Vcp|269523|valosin containing protein	NM_009503|Vcp|269523|valosin containing protein
mm9_v1_chr18_+_65210574_65210693	0.320834	NKX3-2.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr7_-_51746246_51746260	0.32009	NKX3-2.p2	AK206197|2310044H10Rik|69683|RIKEN cDNA 2310044H10 gene	AK208212|2310044H10Rik|69683|RIKEN cDNA 2310044H10 gene	AK215955|2310044H10Rik|69683|RIKEN cDNA 2310044H10 gene	AK216646|2310044H10Rik|69683|RIKEN cDNA 2310044H10 gene
mm9_v1_chr11_-_61668486_61668601	0.319823	NKX3-2.p2	AF145922|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC046778|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC053029|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146620|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK122331|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146893|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK148142|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	NM_013881|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)
mm9_v1_chr2_-_12223518_12223578	0.318701	NKX3-2.p2	BC137793|Itga8|241226|integrin alpha 8	AK135193|Itga8|241226|integrin alpha 8	AK044910|Itga8|241226|integrin alpha 8	NM_001001309|Itga8|241226|integrin alpha 8
mm9_v1_chr2_-_60511707_60511810	0.318176	NKX3-2.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr17_-_90436488_90436574	0.31764	NKX3-2.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr19_+_7631935_7632013	0.317594	NKX3-2.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr19_-_24248477_24248629	0.317571	NKX3-2.p2	AF113005|Tjp2|21873|tight junction protein 2	BC042695|Tjp2|21873|tight junction protein 2	BC034677|Tjp2|21873|tight junction protein 2	BC039924|Tjp2|21873|tight junction protein 2	NM_001198985|Tjp2|21873|tight junction protein 2
mm9_v1_chr6_-_101266541_101266557	0.316545	NKX3-2.p2	AK020657|9530086O07Rik|78741|RIKEN cDNA 9530086O07 gene
mm9_v1_chr15_+_99421458_99421594	0.316406	NKX3-2.p2	NM_009701|Aqp5|11830|aquaporin 5	AK009302|Aqp5|11830|aquaporin 5	AK004736|Aqp5|11830|aquaporin 5
mm9_v1_chr17_-_25969869_25969905	0.316313	NKX3-2.p2	AK166630|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK158595|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr12_-_45311020_45311067	0.316058	NKX3-2.p2	AB028857|Dnajb9|27362|DnaJ (Hsp40) homolog, subfamily B, member 9	BC096676|Dnajb9|27362|DnaJ (Hsp40) homolog, subfamily B, member 9	AK005475|Dnajb9|27362|DnaJ (Hsp40) homolog, subfamily B, member 9	NM_013760|Dnajb9|27362|DnaJ (Hsp40) homolog, subfamily B, member 9
mm9_v1_chr7_-_149843316_149843387	0.315569	NKX3-2.p2	M14951|Igf2|16002|insulin-like growth factor 2	BC058615|Igf2|16002|insulin-like growth factor 2	BC053489|Igf2|16002|insulin-like growth factor 2	NM_001122737|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr8_+_107800316_107800347	0.315536	NKX3-2.p2	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr12_-_32017267_32017279	0.314987	NKX3-2.p2	AK209175|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr11_+_69980155_69980168	0.314853	NKX3-2.p2	AK140762|Clec10a|17312|C-type lectin domain family 10, member A	AK170779|Clec10a|17312|C-type lectin domain family 10, member A
mm9_v1_chr14_-_41998434_41998486	0.314325	NKX3-2.p2	BC012896|Sftpd|20390|surfactant associated protein D	BC003705|Sftpd|20390|surfactant associated protein D	NM_009160|Sftpd|20390|surfactant associated protein D
mm9_v1_chr5_-_31504258_31504301	0.313798	NKX3-2.p2	AK052459|Zfp513|101023|zinc finger protein 513
mm9_v1_chr7_-_31758185_31758231	0.31314	NKX3-2.p2	AK146807|Lsr|54135|lipolysis stimulated lipoprotein receptor	BC004672|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr4_-_35173039_35173134	0.313009	NKX3-2.p2	AK167354|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK014175|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK154817|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	NM_001081343|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene
mm9_v1_chr15_+_65618577_65618631	0.313002	NKX3-2.p2	AK030074|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK039937|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	NM_133766|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044475|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052906|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044000|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC032092|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK051060|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK161250|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AB158474|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC007482|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052176|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK129065|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK032461|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr18_-_21458623_21458645	0.312639	NKX3-2.p2	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr8_+_97190470_97190586	0.312591	NKX3-2.p2	AK150513|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK155242|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	BC024708|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr16_+_4940212_4940403	0.311349	NKX3-2.p2	AK183937|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK193716|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
mm9_v1_chr3_-_35899453_35899599	0.310719	NKX3-2.p2	AK178493|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK168589|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AF310338|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK032203|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK007782|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	BC021382|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK031072|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	NM_023644|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
mm9_v1_chr4_+_118905490_118905555	0.310657	NKX3-2.p2	AK010578|Lepre1|56401|leprecan 1	AK030436|Lepre1|56401|leprecan 1	NM_019782|Lepre1|56401|leprecan 1	NM_019783|Lepre1|56401|leprecan 1	AK132262|Lepre1|56401|leprecan 1	AF165163|Lepre1|56401|leprecan 1	AF165164|Lepre1|56401|leprecan 1	BC024047|Lepre1|56401|leprecan 1
mm9_v1_chr8_+_42011568_42011702	0.310162	NKX3-2.p2	AK081847|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK132625|Pdgfrl|68797|platelet-derived growth factor receptor-like	NM_026840|Pdgfrl|68797|platelet-derived growth factor receptor-like	BC058275|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK004179|Pdgfrl|68797|platelet-derived growth factor receptor-like
mm9_v1_chr10_-_108447674_108447736	0.309096	NKX3-2.p2	BC042519|Syt1|20979|synaptotagmin I	NM_009306|Syt1|20979|synaptotagmin I
mm9_v1_chr17_+_35068258_35068328	0.308982	NKX3-2.p2	AK077444|Neu1|18010|neuraminidase 1	AK145680|Neu1|18010|neuraminidase 1	Y11412|Neu1|18010|neuraminidase 1	U93702|Neu1|18010|neuraminidase 1	BC004666|Neu1|18010|neuraminidase 1
mm9_v1_chr8_+_40068850_40069161	0.30896	NKX3-2.p2	AK132766|Tusc3|80286|tumor suppressor candidate 3	AK088616|Tusc3|80286|tumor suppressor candidate 3	BC069898|Tusc3|80286|tumor suppressor candidate 3	NM_030254|Tusc3|80286|tumor suppressor candidate 3	AK028182|Tusc3|80286|tumor suppressor candidate 3	BC003311|Tusc3|80286|tumor suppressor candidate 3	AK168664|Tusc3|80286|tumor suppressor candidate 3	AK168961|Tusc3|80286|tumor suppressor candidate 3
mm9_v1_chrX_-_49034548_49034559	0.308724	NKX3-2.p2	BC047151|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK052348|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr3_-_130433225_130433274	0.308593	NKX3-2.p2	BC058118|Rpl34|68436|ribosomal protein L34	NM_026724|Rpl34|68436|ribosomal protein L34	BC100360|Rpl34-ps1|619547|ribosomal protein L34, pseudogene 1	AK003177|Rpl34|68436|ribosomal protein L34	AK146252|Rpl34|68436|ribosomal protein L34	BC086936|Rpl34|68436|ribosomal protein L34
mm9_v1_chr10_+_77315603_77315603	0.308206	NKX3-2.p2	NM_001162944|Gm10318|622629|predicted gene 10318
mm9_v1_chr18_+_56591785_56591811	0.307624	NKX3-2.p2	NM_026240|Gramd3|107022|GRAM domain containing 3	AK018691|Gramd3|107022|GRAM domain containing 3	AK164050|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr16_+_24393435_24393655	0.307568	NKX3-2.p2	NM_178665|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK168431|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK085626|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051345|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045288|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045341|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051937|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK086307|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK169780|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr5_-_51945054_51945159	0.306978	NKX3-2.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr18_-_73914084_73914137	0.30656	NKX3-2.p2	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr5_+_115687989_115688106	0.306361	NKX3-2.p2	AK012523|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	AK005290|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	AK012421|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	AK013257|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm9_v1_chr2_-_22895580_22895680	0.306086	NKX3-2.p2	AY033645|Abi1|11308|abl-interactor 1	AK152061|Abi1|11308|abl-interactor 1	AK152184|Abi1|11308|abl-interactor 1	AK034476|Abi1|11308|abl-interactor 1	BC079642|Abi1|11308|abl-interactor 1	AK151026|Abi1|11308|abl-interactor 1	AK153130|Abi1|11308|abl-interactor 1	AK164040|Abi1|11308|abl-interactor 1
mm9_v1_chr12_+_91050912_91050922	0.305533	NKX3-2.p2	AK042730|Nrxn3|18191|neurexin III
mm9_v1_chr6_-_135664978_135664993	0.305309	NKX3-2.p2	
mm9_v1_chr15_+_79059802_79059887	0.304408	NKX3-2.p2	NM_001045558|Pick1|18693|protein interacting with C kinase 1	AK090155|Pick1|18693|protein interacting with C kinase 1	AK050224|Pick1|18693|protein interacting with C kinase 1	BC023088|Pick1|18693|protein interacting with C kinase 1	BC048788|Pick1|18693|protein interacting with C kinase 1	AK162724|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chr1_+_169528706_169528770	0.304302	NKX3-2.p2	X66225|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr1_+_169548381_169548439	0.303882	NKX3-2.p2	NM_001159731|Rxrg|20183|retinoid X receptor gamma	S62952|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr3_+_65332306_65332400	0.302459	NKX3-2.p2	AK163347|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK162094|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	U55178|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK028529|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	NM_178892|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK032453|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK150248|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	BC068173|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase
mm9_v1_chr3_-_88173471_88173641	0.302426	NKX3-2.p2	BC100687|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC101948|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC141238|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC145565|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC069910|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC055868|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	NM_031368|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1
mm9_v1_chr16_+_92058498_92058582	0.300764	NKX3-2.p2	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr3_-_88188354_88188385	0.300226	NKX3-2.p2	U11542|Bglap|12096|bone gamma carboxyglutamate protein	NM_001037939|Bglap|12096|bone gamma carboxyglutamate protein	NM_007541|Bglap|12096|bone gamma carboxyglutamate protein
mm9_v1_chr2_+_59192308_59192366	0.299711	NKX3-2.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr13_+_73741384_73741748	0.299664	NKX3-2.p2	AK032295|Clptm1l|218335|CLPTM1-like	AK048357|Clptm1l|218335|CLPTM1-like	AK156203|Clptm1l|218335|CLPTM1-like	AK165939|Clptm1l|218335|CLPTM1-like	BC026562|Clptm1l|218335|CLPTM1-like	NM_146047|Clptm1l|218335|CLPTM1-like
mm9_v1_chr17_-_35309483_35309575	0.29961	NKX3-2.p2	CT010265|Aif1|11629|allograft inflammatory factor 1	CT010385|Aif1|11629|allograft inflammatory factor 1	AB013745|Aif1|11629|allograft inflammatory factor 1	AF074959|Aif1|11629|allograft inflammatory factor 1	D86382|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr6_+_85865712_85865731	0.299452	NKX3-2.p2	NM_001170488|Tprkb|69786|Tp53rk binding protein	NM_176842|Tprkb|69786|Tp53rk binding protein	AK007695|Tprkb|69786|Tp53rk binding protein	BC027162|Tprkb|69786|Tp53rk binding protein
mm9_v1_chr11_+_62462273_62462304	0.299278	NKX3-2.p2	AK131977|Mmgt2|216829|membrane magnesium transporter 2	AK004099|Mmgt2|216829|membrane magnesium transporter 2
mm9_v1_chr8_+_127100010_127100049	0.298629	NKX3-2.p2	AK008629|Capn9|73647|calpain 9	NM_023709|Capn9|73647|calpain 9	AK144514|Capn9|73647|calpain 9	BC058748|Capn9|73647|calpain 9	U89513|Capn9|73647|calpain 9
mm9_v1_chr12_+_114047124_114047205	0.29857	NKX3-2.p2	AK161400|BC022687|217887|cDNA sequence BC022687	AK081297|BC022687|217887|cDNA sequence BC022687	BC090976|BC022687|217887|cDNA sequence BC022687	NM_145450|BC022687|217887|cDNA sequence BC022687
mm9_v1_chr1_+_75233043_75233043	0.298567	NKX3-2.p2	BC011090|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr8_+_72607402_72607443	0.296947	NKX3-2.p2	AK158408|Hapln4|330790|hyaluronan and proteoglycan link protein 4	AK034300|Hapln4|330790|hyaluronan and proteoglycan link protein 4	AY262758|Hapln4|330790|hyaluronan and proteoglycan link protein 4	AB107882|Hapln4|330790|hyaluronan and proteoglycan link protein 4	NM_177900|Hapln4|330790|hyaluronan and proteoglycan link protein 4	BC125339|Hapln4|330790|hyaluronan and proteoglycan link protein 4	BC125341|Hapln4|330790|hyaluronan and proteoglycan link protein 4
mm9_v1_chr7_+_80536079_80536116	0.2961	NKX3-2.p2	BC023870|Rgma|244058|RGM domain family, member A
mm9_v1_chr1_+_55462764_55462802	0.295382	NKX3-2.p2	AK083136|Plcl1|227120|phospholipase C-like 1	AK161943|Plcl1|227120|phospholipase C-like 1	NM_001114663|Plcl1|227120|phospholipase C-like 1	AK135610|Plcl1|227120|phospholipase C-like 1
mm9_v1_chr7_-_140913846_140914017	0.295345	NKX3-2.p2	BC024885|Dhx32|101437|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm9_v1_chr9_-_50425371_50425373	0.29523	NKX3-2.p2	AK133777|AU019823|270156|expressed sequence AU019823
mm9_v1_chr7_-_52068757_52068869	0.295223	NKX3-2.p2	AK160085|Atf5|107503|activating transcription factor 5	AY024362|Atf5|107503|activating transcription factor 5
mm9_v1_chr13_+_41345120_41345273	0.295043	NKX3-2.p2	NM_001135577|BC024659|108934|cDNA sequence BC024659	BC066054|BC024659|108934|cDNA sequence BC024659	BC094222|BC024659|108934|cDNA sequence BC024659
mm9_v1_chr13_+_58909632_58909641	0.29501	NKX3-2.p2	AK147441|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr11_-_87811778_87811799	0.293993	NKX3-2.p2	BC049621|Dynll2|68097|dynein light chain LC8-type 2	AK006876|Dynll2|68097|dynein light chain LC8-type 2	NM_001168471|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr7_-_134093094_134093095	0.293466	NKX3-2.p2	BC111101|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	NM_001039645|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	AK043553|Asphd1|233879|aspartate beta-hydroxylase domain containing 1
mm9_v1_chr18_-_68588897_68588973	0.293215	NKX3-2.p2	AK033100|Mc2r|17200|melanocortin 2 receptor	NM_008560|Mc2r|17200|melanocortin 2 receptor	D85688|Mc2r|17200|melanocortin 2 receptor
mm9_v1_chrX_+_71550562_71550629	0.293111	NKX3-2.p2	AK156224|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK036969|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK028880|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK171216|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	BC025606|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK032869|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	BC037598|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr4_+_122960527_122960606	0.292889	NKX3-2.p2	BC010345|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	NM_148917|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	BC003283|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4
mm9_v1_chr17_+_36974140_36974211	0.2923	NKX3-2.p2	AK148247|Trim26|22670|tripartite motif-containing 26
mm9_v1_chrX_+_71516128_71516339	0.292259	NKX3-2.p2	NM_052835|Rpl10|110954|ribosomal protein 10	AK146217|Rpl10|110954|ribosomal protein 10	AK011022|Rpl10|110954|ribosomal protein 10	AK088777|Rpl10|110954|ribosomal protein 10	AK144831|Rpl10|110954|ribosomal protein 10	AK151416|Rpl10|110954|ribosomal protein 10	AK151655|Rpl10|110954|ribosomal protein 10	AK152123|Rpl10|110954|ribosomal protein 10	AK152854|Rpl10|110954|ribosomal protein 10	AK153345|Rpl10|110954|ribosomal protein 10	AK160618|Rpl10|110954|ribosomal protein 10	AK167966|Rpl10|110954|ribosomal protein 10	AK168854|Rpl10|110954|ribosomal protein 10	BC086917|Rpl10|110954|ribosomal protein 10	M93980|Rpl10|110954|ribosomal protein 10	AK014054|Rpl10|110954|ribosomal protein 10	AK151736|Rpl10|110954|ribosomal protein 10	AK166610|Rpl10|110954|ribosomal protein 10	AK168250|Rpl10|110954|ribosomal protein 10	AK012561|Rpl10|110954|ribosomal protein 10	AK167239|Rpl10|110954|ribosomal protein 10	BC092383|Rpl10|110954|ribosomal protein 10	BC098204|Rpl10|110954|ribosomal protein 10	X75312|Rpl10|110954|ribosomal protein 10	BC048872|Rpl10|110954|ribosomal protein 10	BC099437|Rpl10|110954|ribosomal protein 10	BC024901|Rpl10|110954|ribosomal protein 10	BC082293|Rpl10|110954|ribosomal protein 10	BC083327|Rpl10|110954|ribosomal protein 10	BC006068|Rpl10|110954|ribosomal protein 10
mm9_v1_chr11_-_53244254_53244338	0.292037	NKX3-2.p2	BC027809|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK007982|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK017907|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK002389|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK005374|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	BC028519|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK003160|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	NM_025352|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII
mm9_v1_chr9_+_21807437_21807509	0.291612	NKX3-2.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr13_-_29043617_29043693	0.291392	NKX3-2.p2	AK051540|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr8_-_41597015_41597116	0.290941	NKX3-2.p2	AK132063|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	BC006021|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK137838|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK147048|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK166449|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK007767|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK009561|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr5_+_53225301_53225438	0.290841	NKX3-2.p2	AK168897|Anapc4|52206|anaphase promoting complex subunit 4	AK148625|Anapc4|52206|anaphase promoting complex subunit 4	BC024870|Anapc4|52206|anaphase promoting complex subunit 4	NM_024213|Anapc4|52206|anaphase promoting complex subunit 4	AK146000|Anapc4|52206|anaphase promoting complex subunit 4	AK168031|Anapc4|52206|anaphase promoting complex subunit 4	AK088759|Anapc4|52206|anaphase promoting complex subunit 4	BC016237|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr11_+_93905443_93905464	0.290712	NKX3-2.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr10_+_79239973_79240019	0.290425	NKX3-2.p2	AK082898|Fstl3|83554|follistatin-like 3	BC061052|Fstl3|83554|follistatin-like 3	NM_031380|Fstl3|83554|follistatin-like 3
mm9_v1_chr12_+_112680868_112680868	0.290365	NKX3-2.p2	AK154155|Tnfaip2|21928|tumor necrosis factor, alpha-induced protein 2
mm9_v1_chr1_+_182981367_182981391	0.289129	NKX3-2.p2	AK162201|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	NM_001033819|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	AK136575|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	BC147378|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	BC147379|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene
mm9_v1_chr4_+_148960536_148960600	0.288879	NKX3-2.p2	AK173059|Clstn1|65945|calsyntenin 1
mm9_v1_chr1_+_17135421_17135611	0.288377	NKX3-2.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr2_+_91386476_91386497	0.287827	NKX3-2.p2	BC017140|Ckap5|75786|cytoskeleton associated protein 5	BC089032|Ckap5|75786|cytoskeleton associated protein 5	NM_001165989|Ckap5|75786|cytoskeleton associated protein 5	NM_029437|Ckap5|75786|cytoskeleton associated protein 5	BC138334|Ckap5|75786|cytoskeleton associated protein 5	BC096422|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr11_-_54846882_54846976	0.28757	NKX3-2.p2	AK161625|Anxa6|11749|annexin A6	AK010342|Anxa6|11749|annexin A6	BC005595|Anxa6|11749|annexin A6	AK077843|Anxa6|11749|annexin A6	AK013026|Anxa6|11749|annexin A6	AK030728|Anxa6|11749|annexin A6	AK150035|Anxa6|11749|annexin A6	AK203372|Anxa6|11749|annexin A6	AK179628|Anxa6|11749|annexin A6	AK147066|Anxa6|11749|annexin A6	AK160754|Anxa6|11749|annexin A6	AK146509|Anxa6|11749|annexin A6	AK146592|Anxa6|11749|annexin A6	AK154101|Anxa6|11749|annexin A6	AK087941|Anxa6|11749|annexin A6	AK169774|Anxa6|11749|annexin A6	NM_001110211|Anxa6|11749|annexin A6	NM_013472|Anxa6|11749|annexin A6
mm9_v1_chr8_+_63134353_63134353	0.287521	NKX3-2.p2	AK016959|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177882|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr14_+_55502200_55502231	0.287414	NKX3-2.p2	AK004680|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr7_-_20334814_20334864	0.287279	NKX3-2.p2	BC009088|Pvrl2|19294|poliovirus receptor-related 2	BC046770|Pvrl2|19294|poliovirus receptor-related 2	AK157513|Pvrl2|19294|poliovirus receptor-related 2	AK075815|Pvrl2|19294|poliovirus receptor-related 2
mm9_v1_chr14_+_27852148_27852279	0.287039	NKX3-2.p2	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr12_+_45370113_45370142	0.286494	NKX3-2.p2	NM_026164|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr19_-_8913619_8913779	0.286255	NKX3-2.p2	BC029680|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK032646|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK004459|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	NM_010316|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3
mm9_v1_chr4_+_101390232_101390324	0.285935	NKX3-2.p2	AK143989|Lepr|16847|leptin receptor
mm9_v1_chr6_-_60778740_60778989	0.285556	NKX3-2.p2	BC046764|Snca|20617|synuclein, alpha	AK156316|Snca|20617|synuclein, alpha	AK014472|Snca|20617|synuclein, alpha	AF033261|Snca|20617|synuclein, alpha	NM_001042451|Snca|20617|synuclein, alpha
mm9_v1_chr11_-_101755622_101755677	0.285451	NKX3-2.p2	Z15103|Meox1|17285|mesenchyme homeobox 1	BC011082|Meox1|17285|mesenchyme homeobox 1	NM_010791|Meox1|17285|mesenchyme homeobox 1	AK052370|Meox1|17285|mesenchyme homeobox 1
mm9_v1_chr10_-_58684594_58684594	0.284854	NKX3-2.p2	AK076569|Sept10|103080|septin 10	NM_001024910|Sept10|103080|septin 10	NM_001024911|Sept10|103080|septin 10
mm9_v1_chr5_+_31754808_31754902	0.284689	NKX3-2.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr19_-_18706181_18706214	0.284107	NKX3-2.p2	BC060986|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr7_+_116662707_116662716	0.284023	NKX3-2.p2	NM_011975|Rpl27a|26451|ribosomal protein L27A	AK138110|Rpl27a|26451|ribosomal protein L27A	AK007837|Rpl27a|26451|ribosomal protein L27A	AK010286|Rpl27a|26451|ribosomal protein L27A	AK167792|Rpl27a|26451|ribosomal protein L27A	AK011361|Rpl27a|26451|ribosomal protein L27A	AK150907|Rpl27a|26451|ribosomal protein L27A	BC086939|Rpl27a|26451|ribosomal protein L27A	AK008531|Rpl27a|26451|ribosomal protein L27A	AK167915|Rpl27a|26451|ribosomal protein L27A	X05021|Rpl27a|26451|ribosomal protein L27A
mm9_v1_chr8_+_125626249_125626348	0.283571	NKX3-2.p2	NM_016738|Rpl13|270106|ribosomal protein L13	AK003487|Rpl13|270106|ribosomal protein L13	AK010989|Rpl13|270106|ribosomal protein L13	AK002787|Rpl13|270106|ribosomal protein L13	U28917|Rpl13|270106|ribosomal protein L13	BC085493|Rpl13|270106|ribosomal protein L13	BC034449|Rpl13|270106|ribosomal protein L13	BC055358|Rpl13|270106|ribosomal protein L13
mm9_v1_chr7_+_58877199_58877199	0.283505	NKX3-2.p2	NM_080853|Slc17a6|140919|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm9_v1_chr12_+_33639034_33639066	0.283321	NKX3-2.p2	NM_198710|Sypl|19027|synaptophysin-like protein
mm9_v1_chr2_-_77541328_77541435	0.28329	NKX3-2.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr10_+_111708176_111708178	0.282883	NKX3-2.p2	AK045425|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116289|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116290|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	NM_001025581|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2
mm9_v1_chr10_+_85763267_85763281	0.28258	NKX3-2.p2	Z30970|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr7_-_35015239_35015294	0.282271	NKX3-2.p2	AK164566|Gpi1|14751|glucose phosphate isomerase 1	AK171956|Gpi1|14751|glucose phosphate isomerase 1	AK159838|Gpi1|14751|glucose phosphate isomerase 1	AK031081|Gpi1|14751|glucose phosphate isomerase 1	BC088995|Gpi1|14751|glucose phosphate isomerase 1	BC157972|Gpi1|14751|glucose phosphate isomerase 1	BC172124|Gpi1|14751|glucose phosphate isomerase 1	AK133827|Gpi1|14751|glucose phosphate isomerase 1	M14220|Gpi1|14751|glucose phosphate isomerase 1	AK137805|Gpi1|14751|glucose phosphate isomerase 1	AK150341|Gpi1|14751|glucose phosphate isomerase 1	AK169681|Gpi1|14751|glucose phosphate isomerase 1	AK134890|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr12_+_81979727_81979876	0.281261	NKX3-2.p2	AK151009|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr1_-_141982814_141983012	0.281133	NKX3-2.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr10_-_117261663_117261731	0.281113	NKX3-2.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chr10_-_31329530_31329530	0.280774	NKX3-2.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr9_+_57758783_57758851	0.280376	NKX3-2.p2	AK154496|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	AK009025|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	NM_001122873|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	NM_027086|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm9_v1_chr7_+_107855215_107855319	0.280278	NKX3-2.p2	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr5_+_138422718_138422792	0.2802	NKX3-2.p2	NM_013478|Azgp1|12007|alpha-2-glycoprotein 1, zinc	AK005051|Azgp1|12007|alpha-2-glycoprotein 1, zinc	BC061646|Azgp1|12007|alpha-2-glycoprotein 1, zinc	AY248694|Azgp1|12007|alpha-2-glycoprotein 1, zinc	D21059|Azgp1|12007|alpha-2-glycoprotein 1, zinc
mm9_v1_chr17_-_66799086_66799133	0.280124	NKX3-2.p2	AK147631|1110012J17Rik|68617|RIKEN cDNA 1110012J17 gene	AK147691|1110012J17Rik|68617|RIKEN cDNA 1110012J17 gene	AK147205|1110012J17Rik|68617|RIKEN cDNA 1110012J17 gene	NM_001114098|1110012J17Rik|68617|RIKEN cDNA 1110012J17 gene	NM_172963|1110012J17Rik|68617|RIKEN cDNA 1110012J17 gene
mm9_v1_chr3_-_152645143_152645180	0.279717	NKX3-2.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr12_+_56937309_56937356	0.277478	NKX3-2.p2	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr7_+_119902897_119902956	0.277445	NKX3-2.p2	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr2_-_166888514_166888514	0.276513	NKX3-2.p2	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr7_+_31093768_31093831	0.276221	NKX3-2.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr1_+_134776927_134777014	0.274683	NKX3-2.p2	AK036271|Lrrn2|16980|leucine rich repeat protein 2, neuronal	AK039216|Lrrn2|16980|leucine rich repeat protein 2, neuronal	NM_010732|Lrrn2|16980|leucine rich repeat protein 2, neuronal
mm9_v1_chr1_-_173224861_173224966	0.273732	NKX3-2.p2	AK011260|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	AK003070|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1
mm9_v1_chr6_+_113102884_113103027	0.27352	NKX3-2.p2	AK088328|Setd5|72895|SET domain containing 5
mm9_v1_chr9_+_21397379_21397470	0.273113	NKX3-2.p2	AK088045|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK089121|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	BC025883|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK034762|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr10_-_126558035_126558203	0.273079	NKX3-2.p2	BC006844|Os9|216440|amplified in osteosarcoma	BC031768|Os9|216440|amplified in osteosarcoma	AK028047|Os9|216440|amplified in osteosarcoma
mm9_v1_chr14_-_31439299_31439408	0.272951	NKX3-2.p2	BC051416|Prkcd|18753|protein kinase C, delta	M69042|Prkcd|18753|protein kinase C, delta	AK168768|Prkcd|18753|protein kinase C, delta	AK171476|Prkcd|18753|protein kinase C, delta	AK144231|Prkcd|18753|protein kinase C, delta
mm9_v1_chr15_+_80808194_80808235	0.272879	NKX3-2.p2	NM_134091|Sgsm3|105835|small G protein signaling modulator 3	AK142314|Sgsm3|105835|small G protein signaling modulator 3	AK170806|Sgsm3|105835|small G protein signaling modulator 3	BC018197|Sgsm3|105835|small G protein signaling modulator 3	BC024122|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr4_-_41720928_41721082	0.272252	NKX3-2.p2	BC099574|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164045|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001048179|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164044|Ccl27a|20301|chemokine (C-C motif) ligand 27A
mm9_v1_chr5_+_31167731_31167889	0.271244	NKX3-2.p2	AK210919|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr7_-_118006397_118006572	0.270838	NKX3-2.p2	AK004726|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	NM_053247|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	BC038653|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	BC038892|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1
mm9_v1_chr18_+_66033139_66033147	0.27067	NKX3-2.p2	AK139345|Grp|225642|gastrin releasing peptide	AK133508|Grp|225642|gastrin releasing peptide	BC024515|Grp|225642|gastrin releasing peptide	NM_175012|Grp|225642|gastrin releasing peptide
mm9_v1_chr7_+_52825672_52825751	0.270418	NKX3-2.p2	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr5_+_136559932_136559958	0.270105	NKX3-2.p2	BC057460|Rasa4|54153|RAS p21 protein activator 4	AK044762|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr11_-_102080155_102080242	0.269738	NKX3-2.p2	AK156008|Hdac5|15184|histone deacetylase 5	AK157159|Hdac5|15184|histone deacetylase 5
mm9_v1_chr9_-_115219177_115219267	0.269434	NKX3-2.p2	AK145674|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK012153|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK154979|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK148065|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK018758|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AX799084|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK170079|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr6_-_6528581_6528672	0.269357	NKX3-2.p2	U41626|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK135462|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK167914|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC023490|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC058117|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK161690|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	X83589|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK160432|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	NM_009169|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK141911|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1
mm9_v1_chr6_+_91162792_91162863	0.267649	NKX3-2.p2	AK161522|Fbln2|14115|fibulin 2	AK017870|Fbln2|14115|fibulin 2	AK168688|Fbln2|14115|fibulin 2	X75285|Fbln2|14115|fibulin 2
mm9_v1_chr7_+_5035137_5035428	0.267381	NKX3-2.p2	BC046962|Epn1|13854|epsin 1
mm9_v1_chr13_-_23654226_23654256	0.266752	NKX3-2.p2	BC127042|Hist1h3e|319151|histone cluster 1, H3e	NM_178205|Hist1h3e|319151|histone cluster 1, H3e
mm9_v1_chr10_+_80102813_80103107	0.266539	NKX3-2.p2	AK180542|Csnk1g2|103236|casein kinase 1, gamma 2	AK182278|Csnk1g2|103236|casein kinase 1, gamma 2	AK184141|Csnk1g2|103236|casein kinase 1, gamma 2	AK184876|Csnk1g2|103236|casein kinase 1, gamma 2	AK013192|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr9_-_57315800_57315896	0.266369	NKX3-2.p2	AF241833|Scamp5|56807|secretory carrier membrane protein 5	BC018613|Scamp5|56807|secretory carrier membrane protein 5	NM_020270|Scamp5|56807|secretory carrier membrane protein 5
mm9_v1_chr8_+_74104386_74104414	0.264189	NKX3-2.p2	AK137700|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr6_+_34362333_34362371	0.263942	NKX3-2.p2	AK147775|Akr1b7|11997|aldo-keto reductase family 1, member B7	NM_009731|Akr1b7|11997|aldo-keto reductase family 1, member B7	AK002705|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chrX_-_139828726_139828804	0.263626	NKX3-2.p2	AF296451|Chrdl1|83453|chordin-like 1	NM_001114385|Chrdl1|83453|chordin-like 1	NM_031258|Chrdl1|83453|chordin-like 1
mm9_v1_chr10_+_128242637_128242644	0.263543	NKX3-2.p2	AK053314|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK045345|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr11_-_87800086_87800086	0.263458	NKX3-2.p2	NM_001168472|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr1_+_173433608_173433701	0.263437	NKX3-2.p2	AK048243|Refbp2|56009|RNA and export factor binding protein 2	NM_019484|Refbp2|56009|RNA and export factor binding protein 2	BC099405|Refbp2|56009|RNA and export factor binding protein 2
mm9_v1_chr17_+_57388873_57388970	0.26294	NKX3-2.p2	NM_134125|Trip10|106628|thyroid hormone receptor interactor 10	BC003249|Trip10|106628|thyroid hormone receptor interactor 10	AK149902|Trip10|106628|thyroid hormone receptor interactor 10	AY081142|Trip10|106628|thyroid hormone receptor interactor 10	AK088909|Trip10|106628|thyroid hormone receptor interactor 10	AF502565|Trip10|106628|thyroid hormone receptor interactor 10
mm9_v1_chr16_+_18248964_18249010	0.262295	NKX3-2.p2	AK017819|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK134368|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001080999|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001081000|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001195205|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr17_+_45823255_45823356	0.261734	NKX3-2.p2	AK144153|Mrpl14|68463|mitochondrial ribosomal protein L14	BC027021|Mrpl14|68463|mitochondrial ribosomal protein L14	NM_026732|Mrpl14|68463|mitochondrial ribosomal protein L14	AK050273|Mrpl14|68463|mitochondrial ribosomal protein L14	AK003500|Mrpl14|68463|mitochondrial ribosomal protein L14
mm9_v1_chr5_+_8046077_8046128	0.261428	NKX3-2.p2	AK008783|Sri|109552|sorcin	NM_025618|Sri|109552|sorcin	AK008404|Sri|109552|sorcin	AK008970|Sri|109552|sorcin
mm9_v1_chr14_-_49685853_49686079	0.261397	NKX3-2.p2	AK134562|Exoc5|105504|exocyst complex component 5	BC049967|Exoc5|105504|exocyst complex component 5	AK167145|Exoc5|105504|exocyst complex component 5	AK170148|Exoc5|105504|exocyst complex component 5	AK157473|Exoc5|105504|exocyst complex component 5	AK171012|Exoc5|105504|exocyst complex component 5	AK164067|Exoc5|105504|exocyst complex component 5	AK152307|Exoc5|105504|exocyst complex component 5
mm9_v1_chr15_-_89307854_89307854	0.261376	NKX3-2.p2	BC098075|Arsa|11883|arylsulfatase A	NM_009713|Arsa|11883|arylsulfatase A
mm9_v1_chr9_-_114842996_114843065	0.261338	NKX3-2.p2	AK050572|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	AK172886|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr7_+_19469999_19470074	0.261162	NKX3-2.p2	BC005582|Pglyrp1|21946|peptidoglycan recognition protein 1	AF076482|Pglyrp1|21946|peptidoglycan recognition protein 1	AK008335|Pglyrp1|21946|peptidoglycan recognition protein 1	NM_009402|Pglyrp1|21946|peptidoglycan recognition protein 1	X86374|Pglyrp1|21946|peptidoglycan recognition protein 1	AK043227|Pglyrp1|21946|peptidoglycan recognition protein 1	AF193843|Pglyrp1|21946|peptidoglycan recognition protein 1	CT010165|Pglyrp1|21946|peptidoglycan recognition protein 1
mm9_v1_chr8_+_107872157_107872157	0.260505	NKX3-2.p2	NM_001081332|Slc9a5|277973|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm9_v1_chr11_+_57615080_57615164	0.259965	NKX3-2.p2	BC051686|Sap30l|50724|SAP30-like	NM_001081168|Sap30l|50724|SAP30-like	BC094930|Sap30l|50724|SAP30-like
mm9_v1_chr10_-_86164623_86164759	0.259458	NKX3-2.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr8_+_107829500_107829543	0.25937	NKX3-2.p2	BC018516|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	NM_172760|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	AK037067|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	AK157875|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	BC058752|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	BC138887|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)
mm9_v1_chr19_+_10680032_10680173	0.258912	NKX3-2.p2	AK155020|Ddb1|13194|damage specific DNA binding protein 1	AK157491|Ddb1|13194|damage specific DNA binding protein 1	AK152228|Ddb1|13194|damage specific DNA binding protein 1	AK146522|Ddb1|13194|damage specific DNA binding protein 1	AK155920|Ddb1|13194|damage specific DNA binding protein 1	AK154303|Ddb1|13194|damage specific DNA binding protein 1	AB026432|Ddb1|13194|damage specific DNA binding protein 1	NM_015735|Ddb1|13194|damage specific DNA binding protein 1	AK145328|Ddb1|13194|damage specific DNA binding protein 1	BC009661|Ddb1|13194|damage specific DNA binding protein 1	AF159853|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr10_-_127103595_127103798	0.258879	NKX3-2.p2	AK171180|Nab2|17937|Ngfi-A binding protein 2	BC045139|Nab2|17937|Ngfi-A binding protein 2	AK155501|Nab2|17937|Ngfi-A binding protein 2	AK158688|Nab2|17937|Ngfi-A binding protein 2	U47543|Nab2|17937|Ngfi-A binding protein 2	NM_001122895|Nab2|17937|Ngfi-A binding protein 2	NM_008668|Nab2|17937|Ngfi-A binding protein 2
mm9_v1_chr8_-_96560811_96560953	0.258735	NKX3-2.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chr4_-_88956849_88956949	0.256447	NKX3-2.p2	AF059567|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	BC002010|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	AK146668|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	NM_007670|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	AK144132|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
mm9_v1_chr9_-_24913234_24913238	0.254577	NKX3-2.p2	AK208093|Herpud2|80517|HERPUD family member 2
mm9_v1_chr8_-_24367395_24367561	0.253972	NKX3-2.p2	BC058523|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK158227|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	BC019697|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AB041568|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK150696|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	BC016894|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	BC103796|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	BC093518|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK077582|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK152606|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK048175|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK170129|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK089856|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK150462|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK151353|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK152520|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	AK153213|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	NM_001042484|Golga7|57437|golgi autoantigen, golgin subfamily a, 7	NM_020585|Golga7|57437|golgi autoantigen, golgin subfamily a, 7
mm9_v1_chr7_-_149762551_149762560	0.253923	NKX3-2.p2	AK003142|H19|14955|H19 fetal liver mRNA
mm9_v1_chr1_-_152240082_152240184	0.253763	NKX3-2.p2	NM_001077237|BC003331|226499|cDNA sequence BC003331	NM_145511|BC003331|226499|cDNA sequence BC003331
mm9_v1_chr18_-_70212948_70213022	0.252452	NKX3-2.p2	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr15_-_77950450_77950459	0.252004	NKX3-2.p2	AK045362|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chr7_-_52749530_52749570	0.251322	NKX3-2.p2	AK179888|Nucb1|18220|nucleobindin 1	AK215214|Nucb1|18220|nucleobindin 1	AK216538|Nucb1|18220|nucleobindin 1	AK034944|Nucb1|18220|nucleobindin 1
mm9_v1_chr16_-_94592095_94592172	0.251205	NKX3-2.p2	NM_001159618|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr7_+_31198774_31198857	0.250884	NKX3-2.p2	BC056450|Tyrobp|22177|TYRO protein tyrosine kinase binding protein	NM_011662|Tyrobp|22177|TYRO protein tyrosine kinase binding protein	AK154480|Tyrobp|22177|TYRO protein tyrosine kinase binding protein	AF024637|Tyrobp|22177|TYRO protein tyrosine kinase binding protein	AF077829|Tyrobp|22177|TYRO protein tyrosine kinase binding protein
mm9_v1_chr15_+_100446018_100446129	0.250078	NKX3-2.p2	AK002595|Dazap2|23994|DAZ associated protein 2	AK145398|Dazap2|23994|DAZ associated protein 2	AK146970|Dazap2|23994|DAZ associated protein 2	L10906|Dazap2|23994|DAZ associated protein 2	AK088916|Dazap2|23994|DAZ associated protein 2	AK132139|Dazap2|23994|DAZ associated protein 2	AK137246|Dazap2|23994|DAZ associated protein 2	BC014808|Dazap2|23994|DAZ associated protein 2	NM_011873|Dazap2|23994|DAZ associated protein 2	BC083347|Dazap2|23994|DAZ associated protein 2	AF085348|Dazap2|23994|DAZ associated protein 2
mm9_v1_chr1_+_173275799_173275833	0.249442	NKX3-2.p2	BC049606|Pfdn2|18637|prefoldin 2	NM_011070|Pfdn2|18637|prefoldin 2
mm9_v1_chr3_-_125641429_125641514	0.249412	NKX3-2.p2	AK163650|Ugt8a|22239|UDP galactosyltransferase 8A	AK128994|Ugt8a|22239|UDP galactosyltransferase 8A	AK137364|Ugt8a|22239|UDP galactosyltransferase 8A	AK144005|Ugt8a|22239|UDP galactosyltransferase 8A	NM_011674|Ugt8a|22239|UDP galactosyltransferase 8A	AK078371|Ugt8a|22239|UDP galactosyltransferase 8A
mm9_v1_chr14_+_22487956_22487985	0.24924	NKX3-2.p2	AK086637|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr15_-_51697041_51697058	0.248769	NKX3-2.p2	AK168123|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chr6_+_49773596_49773680	0.248427	NKX3-2.p2	AF273768|Npy|109648|neuropeptide Y	AF286198|Npy|109648|neuropeptide Y	AF286199|Npy|109648|neuropeptide Y
mm9_v1_chr9_-_114843103_114843123	0.24839	NKX3-2.p2	NM_175380|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chrX_-_35605544_35605615	0.248145	NKX3-2.p2	BC062956|Fam70a|245386|family with sequence similarity 70, member A	AK077178|Fam70a|245386|family with sequence similarity 70, member A	AK078264|Fam70a|245386|family with sequence similarity 70, member A	AK041985|Fam70a|245386|family with sequence similarity 70, member A	AK045375|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr16_-_24393527_24393719	0.24769	NKX3-2.p2	AK004252|1110054M08Rik|68841|RIKEN cDNA 1110054M08 gene	AK039760|1110054M08Rik|68841|RIKEN cDNA 1110054M08 gene
mm9_v1_chr3_-_29912113_29912128	0.247601	NKX3-2.p2	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr5_-_42235532_42235553	0.246819	NKX3-2.p2	AK079548|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK077824|Bod1l|665775|biorientation of chromosomes in cell division 1-like	NM_001081422|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr4_-_40226373_40226477	0.246375	NKX3-2.p2	BC147062|Ndufb6|230075|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6	BC147063|Ndufb6|230075|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6	AK146762|Ndufb6|230075|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6	NM_001033305|Ndufb6|230075|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
mm9_v1_chrX_+_132758579_132758588	0.246242	NKX3-2.p2	NM_001127169|Tceal7|100040972|transcription elongation factor A (SII)-like 7	AK003800|Tceal7|100040972|transcription elongation factor A (SII)-like 7
mm9_v1_chr15_-_39775173_39775370	0.246125	NKX3-2.p2	AK050512|Lrp12|239393|low density lipoprotein-related protein 12	NM_172814|Lrp12|239393|low density lipoprotein-related protein 12
mm9_v1_chr14_+_55050437_55050513	0.246052	NKX3-2.p2	AK155117|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK088476|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK165014|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	NM_008608|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK163601|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	BC076638|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	U54984|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK149907|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK040968|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK138611|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK134340|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK149636|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)
mm9_v1_chr13_-_98976043_98976393	0.245993	NKX3-2.p2	BC138030|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC075734|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC098331|Rgnef|110596|Rho-guanine nucleotide exchange factor	NM_012026|Rgnef|110596|Rho-guanine nucleotide exchange factor	U73199|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC022978|Rgnef|110596|Rho-guanine nucleotide exchange factor	AK173325|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr4_+_95634005_95634072	0.244766	NKX3-2.p2	AK020924|Hook1|77963|hook homolog 1 (Drosophila)	AK028714|Hook1|77963|hook homolog 1 (Drosophila)	AK038941|Hook1|77963|hook homolog 1 (Drosophila)	AK043870|Hook1|77963|hook homolog 1 (Drosophila)	AK049897|Hook1|77963|hook homolog 1 (Drosophila)	BC061688|Hook1|77963|hook homolog 1 (Drosophila)	NM_030014|Hook1|77963|hook homolog 1 (Drosophila)
mm9_v1_chr8_+_113370907_113370999	0.244179	NKX3-2.p2	NM_133973|Cog4|102339|component of oligomeric golgi complex 4	AK090225|Cog4|102339|component of oligomeric golgi complex 4	AK156466|Cog4|102339|component of oligomeric golgi complex 4	AK172465|Cog4|102339|component of oligomeric golgi complex 4	BC023120|Cog4|102339|component of oligomeric golgi complex 4	AK182269|Cog4|102339|component of oligomeric golgi complex 4
mm9_v1_chr11_+_89891661_89891661	0.243849	NKX3-2.p2	AK007878|Tmem100|67888|transmembrane protein 100	NM_026433|Tmem100|67888|transmembrane protein 100
mm9_v1_chr5_+_130555291_130555503	0.243763	NKX3-2.p2	AK150753|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_001130476|Tpst1|22021|protein-tyrosine sulfotransferase 1	BC012666|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr1_-_175263540_175263633	0.243696	NKX3-2.p2	AY289754|Darc|13349|Duffy blood group, chemokine receptor	AY291295|Darc|13349|Duffy blood group, chemokine receptor	AF016584|Darc|13349|Duffy blood group, chemokine receptor	BC005583|Darc|13349|Duffy blood group, chemokine receptor	AF109159|Darc|13349|Duffy blood group, chemokine receptor	NM_010045|Darc|13349|Duffy blood group, chemokine receptor
mm9_v1_chr7_+_29606244_29606259	0.243625	NKX3-2.p2	AK006480|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L
mm9_v1_chr2_-_152240762_152240779	0.243611	NKX3-2.p2	BC055755|Zcchc3|67917|zinc finger, CCHC domain containing 3	NM_175126|Zcchc3|67917|zinc finger, CCHC domain containing 3
mm9_v1_chr11_-_101026399_101026436	0.242836	NKX3-2.p2	AK052371|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr5_+_32761610_32761706	0.242761	NKX3-2.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr3_-_27795287_27795289	0.242624	NKX3-2.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr9_-_96264765_96264786	0.242493	NKX3-2.p2	AK148495|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr15_+_75771566_75771616	0.242187	NKX3-2.p2	AK028561|Zfp623|78834|zinc finger protein 623
mm9_v1_chr15_-_60654198_60654219	0.242103	NKX3-2.p2	AK162412|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr17_+_3397206_3397287	0.242089	NKX3-2.p2	AB022915|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_011878|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK158137|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK129474|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr19_+_47314809_47314814	0.241588	NKX3-2.p2	AK078529|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr5_-_143874629_143874716	0.240815	NKX3-2.p2	AK089775|Rnf216|108086|ring finger protein 216	AK090306|Rnf216|108086|ring finger protein 216	AK147861|Rnf216|108086|ring finger protein 216	AK149741|Rnf216|108086|ring finger protein 216	AK154368|Rnf216|108086|ring finger protein 216	BC065066|Rnf216|108086|ring finger protein 216	NM_080561|Rnf216|108086|ring finger protein 216	NM_207110|Rnf216|108086|ring finger protein 216
mm9_v1_chr16_-_26371711_26371924	0.240573	NKX3-2.p2	CT010299|Cldn1|12737|claudin 1	EU076705|Cldn1|12737|claudin 1	BC008536|Cldn1|12737|claudin 1	AF072127|Cldn1|12737|claudin 1	AK054207|Cldn1|12737|claudin 1	BC002003|Cldn1|12737|claudin 1	AK036762|Cldn1|12737|claudin 1	AK028428|Cldn1|12737|claudin 1	AK081601|Cldn1|12737|claudin 1	AK036780|Cldn1|12737|claudin 1	AK040604|Cldn1|12737|claudin 1	NM_016674|Cldn1|12737|claudin 1
mm9_v1_chr10_+_51953390_51953445	0.239504	NKX3-2.p2	AK016485|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	NM_025705|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	AK157211|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1
mm9_v1_chr5_+_67698177_67698238	0.239489	NKX3-2.p2	AK082853|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK143277|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	NM_178651|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK032323|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AY682914|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK035541|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	BC141008|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK028885|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK038559|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9
mm9_v1_chr4_-_83919835_83919836	0.238505	NKX3-2.p2	AK018429|Bnc2|242509|basonuclin 2
mm9_v1_chr9_-_21043503_21043590	0.238408	NKX3-2.p2	BC023945|Keap1|50868|kelch-like ECH-associated protein 1	AK154430|Keap1|50868|kelch-like ECH-associated protein 1	AK155507|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr1_-_173177243_173177273	0.237999	NKX3-2.p2	AK146269|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr10_-_126558207_126558220	0.237837	NKX3-2.p2	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr8_-_47060486_47060605	0.236739	NKX3-2.p2	BC107256|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK006501|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK156041|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	NM_001033148|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene
mm9_v1_chr15_-_51696910_51697018	0.235812	NKX3-2.p2	AK177719|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC014755|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	NM_080635|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167651|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK003560|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC091728|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK149081|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK159113|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chr2_-_102241053_102241195	0.235621	NKX3-2.p2	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr10_+_127525538_127525558	0.235547	NKX3-2.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr3_+_96050607_96050778	0.234986	NKX3-2.p2	BC094041|Hist2h3c1|15077|histone cluster 2, H3c1	NM_178216|Hist2h3c1|15077|histone cluster 2, H3c1	BC132488|Hist2h3c2-ps|97114|histone cluster 2, H3c2, pseudogene	BC132490|Hist2h3c2-ps|97114|histone cluster 2, H3c2, pseudogene
mm9_v1_chr14_+_32955237_32955242	0.234889	NKX3-2.p2	U89840|Msmb|17695|beta-microseminoprotein
mm9_v1_chr16_-_23890909_23890942	0.234709	NKX3-2.p2	BC010770|Sst|20604|somatostatin	AK003014|Sst|20604|somatostatin	NM_009215|Sst|20604|somatostatin
mm9_v1_chr6_-_55631256_55631256	0.234633	NKX3-2.p2	AK144360|Neurod6|11922|neurogenic differentiation 6	NM_009717|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr10_+_87841876_87842156	0.234549	NKX3-2.p2	BC060638|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK140867|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK173132|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_001004164|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm9_v1_chr4_-_57156490_57156519	0.234425	NKX3-2.p2	AB032366|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr16_+_96422243_96422259	0.234209	NKX3-2.p2	AJ272170|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein	BC055870|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr2_+_91512033_91512158	0.23394	NKX3-2.p2	AK083702|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr14_-_52898915_52898939	0.233299	NKX3-2.p2	AB232586|Rab2b|76338|RAB2B, member RAS oncogene family	AK160351|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr13_+_46513668_46513668	0.233108	NKX3-2.p2	NM_001081425|Rbm24|666794|RNA binding motif protein 24
mm9_v1_chr2_+_110561733_110561771	0.232573	NKX3-2.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr2_+_181115939_181116074	0.232279	NKX3-2.p2	AF115339|Lime1|72699|Lck interacting transmembrane adaptor 1	NM_023684|Lime1|72699|Lck interacting transmembrane adaptor 1	AK172632|Lime1|72699|Lck interacting transmembrane adaptor 1
mm9_v1_chr19_-_4163292_4163339	0.231603	NKX3-2.p2	AK090093|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	AK156361|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	BC051631|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	BC066842|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	AK014412|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2
mm9_v1_chr19_-_47538898_47538933	0.230765	NKX3-2.p2	AJ007012|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_001164717|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_008018|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr13_-_35055651_35055680	0.230722	NKX3-2.p2	BC014724|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK007578|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK131590|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	NM_026947|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene
mm9_v1_chr6_-_127718746_127718746	0.229918	NKX3-2.p2	BC060250|Prmt8|381813|protein arginine N-methyltransferase 8	NM_201371|Prmt8|381813|protein arginine N-methyltransferase 8
mm9_v1_chr9_-_96264688_96264739	0.229695	NKX3-2.p2	NM_007502|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	U59761|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	BC079916|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK168273|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK032516|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK151700|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK151841|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK159532|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr10_-_80129430_80129498	0.229297	NKX3-2.p2	AK194912|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK189980|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK196822|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK202566|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK204946|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr18_-_60783889_60783905	0.229261	NKX3-2.p2	AK158933|Synpo|104027|synaptopodin	AK171288|Synpo|104027|synaptopodin
mm9_v1_chr3_-_87572823_87572881	0.229259	NKX3-2.p2	BC042490|Pear1|73182|platelet endothelial aggregation receptor 1	AF440279|Pear1|73182|platelet endothelial aggregation receptor 1	AK042308|Pear1|73182|platelet endothelial aggregation receptor 1	AK053551|Pear1|73182|platelet endothelial aggregation receptor 1	AK141082|Pear1|73182|platelet endothelial aggregation receptor 1	AK161049|Pear1|73182|platelet endothelial aggregation receptor 1	NM_001032413|Pear1|73182|platelet endothelial aggregation receptor 1	NM_001032414|Pear1|73182|platelet endothelial aggregation receptor 1	NM_028460|Pear1|73182|platelet endothelial aggregation receptor 1	NM_152799|Pear1|73182|platelet endothelial aggregation receptor 1	AK014179|Pear1|73182|platelet endothelial aggregation receptor 1
mm9_v1_chr11_+_68913653_68913659	0.228814	NKX3-2.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr17_+_35960291_35960382	0.228311	NKX3-2.p2	BC004647|Flot1|14251|flotillin 1	AY167925|Flot1|14251|flotillin 1	NM_008027|Flot1|14251|flotillin 1	U90435|Flot1|14251|flotillin 1	AK150827|Flot1|14251|flotillin 1	AK167323|Flot1|14251|flotillin 1
mm9_v1_chr17_-_74397195_74397255	0.228034	NKX3-2.p2	AK138946|Srd5a2|94224|steroid 5 alpha-reductase 2	BC125510|Srd5a2|94224|steroid 5 alpha-reductase 2	AB049456|Srd5a2|94224|steroid 5 alpha-reductase 2	NM_053188|Srd5a2|94224|steroid 5 alpha-reductase 2
mm9_v1_chr11_+_112643501_112643595	0.227945	NKX3-2.p2	NM_011448|Sox9|20682|SRY-box containing gene 9	AK049986|Sox9|20682|SRY-box containing gene 9	AK030187|Sox9|20682|SRY-box containing gene 9	AK031516|Sox9|20682|SRY-box containing gene 9	BC023796|Sox9|20682|SRY-box containing gene 9	BC023808|Sox9|20682|SRY-box containing gene 9	BC024958|Sox9|20682|SRY-box containing gene 9	BC023953|Sox9|20682|SRY-box containing gene 9	AK220197|Sox9|20682|SRY-box containing gene 9	BC034264|Sox9|20682|SRY-box containing gene 9
mm9_v1_chr1_+_9591492_9591529	0.227629	NKX3-2.p2	AK043576|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr5_-_114830457_114830513	0.227288	NKX3-2.p2	AK147714|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK163351|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK161199|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK028657|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK041516|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK145295|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK166505|Kctd10|330171|potassium channel tetramerisation domain containing 10	BC006935|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_001159941|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_026145|Kctd10|330171|potassium channel tetramerisation domain containing 10
mm9_v1_chr13_-_54789064_54789098	0.226961	NKX3-2.p2	AK161651|Rnf44|105239|ring finger protein 44
mm9_v1_chr8_+_97362292_97362384	0.226428	NKX3-2.p2	AK154343|Coq9|67914|coenzyme Q9 homolog (yeast)	AK158979|Coq9|67914|coenzyme Q9 homolog (yeast)	AK009179|Coq9|67914|coenzyme Q9 homolog (yeast)	BC036386|Coq9|67914|coenzyme Q9 homolog (yeast)	NM_026452|Coq9|67914|coenzyme Q9 homolog (yeast)	AK217654|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr15_+_66722968_66722992	0.225777	NKX3-2.p2	BC052677|Wisp1|22402|WNT1 inducible signaling pathway protein 1
mm9_v1_chr13_+_118391270_118391304	0.225467	NKX3-2.p2	AJ225123|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr1_+_24685711_24685764	0.22488	NKX3-2.p2	AK158982|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr10_-_79862025_79862166	0.224665	NKX3-2.p2	BC038264|Mbd3|17192|methyl-CpG binding domain protein 3
mm9_v1_chr15_+_99239082_99239188	0.224382	NKX3-2.p2	AK039762|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK003483|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr1_+_61685397_61685574	0.223131	NKX3-2.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr8_+_129823507_129823551	0.222658	NKX3-2.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr4_-_136438225_136438228	0.222476	NKX3-2.p2	X16874|C1qb|12260|complement component 1, q subcomponent, beta polypeptide
mm9_v1_chr8_-_107871763_107871818	0.221478	NKX3-2.p2	AB041045|Fhod1|234686|formin homology 2 domain containing 1	BC017144|Fhod1|234686|formin homology 2 domain containing 1
mm9_v1_chr16_-_17530777_17530885	0.220534	NKX3-2.p2	AK007329|Thap7|69009|THAP domain containing 7
mm9_v1_chr6_-_12699189_12699252	0.220491	NKX3-2.p2	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr5_+_67651890_67652024	0.220457	NKX3-2.p2	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chr5_-_149363989_149364264	0.220098	NKX3-2.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chrX_-_49033575_49033608	0.219708	NKX3-2.p2	AB024565|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	BC037659|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr3_-_94819306_94819341	0.217106	NKX3-2.p2	AK148239|Zfp687|78266|zinc finger protein 687
mm9_v1_chr7_-_134027930_134028177	0.216802	NKX3-2.p2	BC077714|Taok2|381921|TAO kinase 2	BC075676|Taok2|381921|TAO kinase 2
mm9_v1_chr6_+_124989830_124989833	0.216324	NKX3-2.p2	
mm9_v1_chr13_+_91062764_91062789	0.215714	NKX3-2.p2	BC100603|Rps23|66475|ribosomal protein S23	AK002573|Rps23|66475|ribosomal protein S23	AK010594|Rps23|66475|ribosomal protein S23	AK012287|Rps23|66475|ribosomal protein S23	AK013720|Rps23|66475|ribosomal protein S23	AK088085|Rps23|66475|ribosomal protein S23	AK010608|Rps23|66475|ribosomal protein S23	AK050580|Rps23|66475|ribosomal protein S23	AK012574|Rps23|66475|ribosomal protein S23	AK012438|Rps23|66475|ribosomal protein S23	AK168587|Rps23|66475|ribosomal protein S23	NM_001100608|Gm15450|100038875|predicted gene 15450	BC002145|Rps23|66475|ribosomal protein S23	BC054435|Rps23|66475|ribosomal protein S23	BC078418|Rps23|66475|ribosomal protein S23
mm9_v1_chr3_-_79646568_79646600	0.215579	NKX3-2.p2	AK079384|Tmem144|70652|transmembrane protein 144	NM_027495|Tmem144|70652|transmembrane protein 144	AK017808|Tmem144|70652|transmembrane protein 144
mm9_v1_chr16_+_45159173_45159221	0.215577	NKX3-2.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr13_+_118391126_118391233	0.21522	NKX3-2.p2	AK158322|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1	NM_010408|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr15_-_74502981_74503002	0.215207	NKX3-2.p2	AF162777|Arc|11838|activity regulated cytoskeletal-associated protein	BC023127|Arc|11838|activity regulated cytoskeletal-associated protein	AK170446|Arc|11838|activity regulated cytoskeletal-associated protein	AK157822|Arc|11838|activity regulated cytoskeletal-associated protein	NM_018790|Arc|11838|activity regulated cytoskeletal-associated protein
mm9_v1_chr9_+_43909852_43909924	0.214759	NKX3-2.p2	AK053629|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_001190313|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_001190314|Mfrp|259172|membrane-type frizzled-related protein	NM_145613|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_147126|Mfrp|259172|membrane-type frizzled-related protein	AF469650|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5
mm9_v1_chr1_-_63223287_63223307	0.214691	NKX3-2.p2	AK034597|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr7_-_52781502_52781637	0.214364	NKX3-2.p2	BC138485|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	BC138486|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK154697|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	X51829|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK167317|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK079339|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK136336|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	NM_008654|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm9_v1_chr14_+_70930768_70930822	0.213955	NKX3-2.p2	BC055315|Lgi3|213469|leucine-rich repeat LGI family, member 3	BC061460|Lgi3|213469|leucine-rich repeat LGI family, member 3
mm9_v1_chr17_+_33980030_33980035	0.213274	NKX3-2.p2	AK078151|Cd320|54219|CD320 antigen	AK088189|Cd320|54219|CD320 antigen	NM_019421|Cd320|54219|CD320 antigen
mm9_v1_chr9_-_55359898_55360033	0.21289	NKX3-2.p2	BC096645|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	BC003432|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK133525|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK032830|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK168321|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK167572|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chrX_-_141884479_141884623	0.212438	NKX3-2.p2	AK053987|Amot|27494|angiomotin
mm9_v1_chr12_+_45429913_45429941	0.212107	NKX3-2.p2	AK087693|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	AK122252|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chrX_+_156828621_156828656	0.211988	NKX3-2.p2	NM_001079847|Gpr64|237175|G protein-coupled receptor 64	NM_001079848|Gpr64|237175|G protein-coupled receptor 64	NM_001079857|Gpr64|237175|G protein-coupled receptor 64	NM_178712|Gpr64|237175|G protein-coupled receptor 64	AK046871|Gpr64|237175|G protein-coupled receptor 64	AF538952|Gpr64|237175|G protein-coupled receptor 64	AF538955|Gpr64|237175|G protein-coupled receptor 64	AF538956|Gpr64|237175|G protein-coupled receptor 64	AF538957|Gpr64|237175|G protein-coupled receptor 64
mm9_v1_chr14_+_9046655_9046821	0.211587	NKX3-2.p2	AK082924|Kctd6|71393|potassium channel tetramerisation domain containing 6	AK017384|Kctd6|71393|potassium channel tetramerisation domain containing 6	NM_027782|Kctd6|71393|potassium channel tetramerisation domain containing 6	BC096370|Kctd6|71393|potassium channel tetramerisation domain containing 6
mm9_v1_chr15_-_64753721_64753861	0.210962	NKX3-2.p2	U85021|Adcy8|11514|adenylate cyclase 8	BC094231|Adcy8|11514|adenylate cyclase 8	AK163443|Adcy8|11514|adenylate cyclase 8	AK138244|Adcy8|11514|adenylate cyclase 8	NM_009623|Adcy8|11514|adenylate cyclase 8
mm9_v1_chr1_-_77511577_77511645	0.210778	NKX3-2.p2	BC004782|Epha4|13838|Eph receptor A4	BC052164|Epha4|13838|Eph receptor A4
mm9_v1_chr18_-_6241341_6241371	0.210626	NKX3-2.p2	U86090|Kif5b|16573|kinesin family member 5B
mm9_v1_chr11_-_57332054_57332159	0.210176	NKX3-2.p2	BC019518|Fam114a2|67726|family with sequence similarity 114, member A2	AK018570|Fam114a2|67726|family with sequence similarity 114, member A2	AK076316|Fam114a2|67726|family with sequence similarity 114, member A2	AK149763|Fam114a2|67726|family with sequence similarity 114, member A2	AK007968|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168667|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168668|Fam114a2|67726|family with sequence similarity 114, member A2	NM_026342|Fam114a2|67726|family with sequence similarity 114, member A2
mm9_v1_chr9_-_44215589_44215630	0.209921	NKX3-2.p2	AF233340|Trappc4|60409|trafficking protein particle complex 4	BC038898|Trappc4|60409|trafficking protein particle complex 4	NM_021789|Trappc4|60409|trafficking protein particle complex 4
mm9_v1_chr9_+_43901941_43901990	0.209387	NKX3-2.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr1_+_136328081_136328132	0.208998	NKX3-2.p2	AK186237|Adipor1|72674|adiponectin receptor 1	AK204573|Adipor1|72674|adiponectin receptor 1	AK188561|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr9_-_96264747_96264751	0.208979	NKX3-2.p2	AK161282|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr7_+_129363009_129363009	0.208214	NKX3-2.p2	BC119202|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	BC119204|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	NM_027363|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene
mm9_v1_chr4_-_132833622_132833720	0.207736	NKX3-2.p2	BC037609|Tmem222|52174|transmembrane protein 222	AK079189|Tmem222|52174|transmembrane protein 222	AK017503|Tmem222|52174|transmembrane protein 222	AK160188|Tmem222|52174|transmembrane protein 222	NM_025667|Tmem222|52174|transmembrane protein 222
mm9_v1_chr10_+_55834925_55834944	0.207504	NKX3-2.p2	BC013191|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)
mm9_v1_chr6_+_83028608_83028623	0.207471	NKX3-2.p2	AK008048|Pcgf1|69837|polycomb group ring finger 1
mm9_v1_chr11_+_75813413_75813528	0.206958	NKX3-2.p2	NM_198637|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	BC049758|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK006044|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK132806|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene
mm9_v1_chr11_+_70471347_70471375	0.206839	NKX3-2.p2	CT010193|Eno3|13808|enolase 3, beta muscle
mm9_v1_chr7_+_126904427_126904559	0.206547	NKX3-2.p2	NM_016870|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	NM_212441|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	NM_212442|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK143946|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AF068246|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AY064696|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK041060|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK165516|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK077247|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	BC015248|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AB022340|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3
mm9_v1_chr8_+_14095884_14096088	0.206543	NKX3-2.p2	BC118969|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr8_+_24780132_24780145	0.206508	NKX3-2.p2	AK140391|Zmat4|320158|zinc finger, matrin type 4	AK140413|Zmat4|320158|zinc finger, matrin type 4	NM_177086|Zmat4|320158|zinc finger, matrin type 4	AK036254|Zmat4|320158|zinc finger, matrin type 4	AK134793|Zmat4|320158|zinc finger, matrin type 4	BC065110|Zmat4|320158|zinc finger, matrin type 4	BC079657|Zmat4|320158|zinc finger, matrin type 4
mm9_v1_chr14_+_21167383_21167391	0.206018	NKX3-2.p2	AK031973|Fam149b|105428|family with sequence similarity 149, member B	NM_001177633|Fam149b|105428|family with sequence similarity 149, member B	NM_172379|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chrX_-_103415034_103415180	0.206005	NKX3-2.p2	AK135097|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001001176|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr12_-_32635061_32635121	0.206003	NKX3-2.p2	AK028949|Hbp1|73389|high mobility group box transcription factor 1	AK132503|Hbp1|73389|high mobility group box transcription factor 1	AK139211|Hbp1|73389|high mobility group box transcription factor 1	AK142187|Hbp1|73389|high mobility group box transcription factor 1	AK053005|Hbp1|73389|high mobility group box transcription factor 1	AK028674|Hbp1|73389|high mobility group box transcription factor 1	BC026853|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr1_-_75274890_75274917	0.205142	NKX3-2.p2	FJ621497|Resp18|19711|regulated endocrine-specific protein 18	AK019440|Resp18|19711|regulated endocrine-specific protein 18	AK012477|Resp18|19711|regulated endocrine-specific protein 18	BC027535|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr15_-_76180500_76180651	0.204878	NKX3-2.p2	AK178398|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr5_-_52957518_52957569	0.204749	NKX3-2.p2	NM_144945|Lgi2|246316|leucine-rich repeat LGI family, member 2	AJ487515|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr1_+_50984361_50984403	0.204402	NKX3-2.p2	AB041565|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK029307|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	NM_019790|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK076254|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK135038|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	BC034850|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AB017270|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2
mm9_v1_chr5_-_31210054_31210143	0.204034	NKX3-2.p2	BC082316|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002453|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK005413|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK009384|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK010297|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	NM_001134692|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	BC002177|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK019285|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002224|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK003569|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr2_-_155755765_155755804	0.203799	NKX3-2.p2	AK011953|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK054294|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK169413|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK077323|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AF253516|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK010376|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK011152|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK019425|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr6_+_124989841_124989878	0.20374	NKX3-2.p2	AK046126|Ing4|28019|inhibitor of growth family, member 4	AK050522|Ing4|28019|inhibitor of growth family, member 4	AK031633|Ing4|28019|inhibitor of growth family, member 4	AK002821|Ing4|28019|inhibitor of growth family, member 4	AK009267|Ing4|28019|inhibitor of growth family, member 4	NM_133345|Ing4|28019|inhibitor of growth family, member 4	BC009127|Ing4|28019|inhibitor of growth family, member 4	AY035880|Ing4|28019|inhibitor of growth family, member 4	AY035881|Ing4|28019|inhibitor of growth family, member 4	AY036107|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr11_+_95275392_95275501	0.203285	NKX3-2.p2	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chr15_+_66751544_66751594	0.202709	NKX3-2.p2	AK164558|Wisp1|22402|WNT1 inducible signaling pathway protein 1
mm9_v1_chr19_-_46114019_46114148	0.202233	NKX3-2.p2	NM_010697|Ldb1|16825|LIM domain binding 1	U69270|Ldb1|16825|LIM domain binding 1
mm9_v1_chr7_-_150926207_150926273	0.20196	NKX3-2.p2	BC079872|Osbpl5|79196|oxysterol binding protein-like 5	AB074008|Osbpl5|79196|oxysterol binding protein-like 5
mm9_v1_chr7_-_54051038_54051113	0.201519	NKX3-2.p2	AK157182|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534396|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534397|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534399|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK141088|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK154612|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr2_-_155555105_155555210	0.201277	NKX3-2.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr8_-_86773599_86773659	0.201223	NKX3-2.p2	BC024662|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	AK146163|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	AK167785|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	NM_001007571|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed
mm9_v1_chr11_-_78059124_78059213	0.201042	NKX3-2.p2	BC072657|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	AK170533|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	U40375|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)	NM_009297|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)
mm9_v1_chr5_+_81450617_81450617	0.200689	NKX3-2.p2	BC088989|Lphn3|319387|latrophilin 3	NM_198702|Lphn3|319387|latrophilin 3
mm9_v1_chr3_+_92143061_92143080	0.200274	NKX3-2.p2	AK008778|Sprr2d|20758|small proline-rich protein 2D	AY158988|Sprr2d|20758|small proline-rich protein 2D	NM_011470|Sprr2d|20758|small proline-rich protein 2D	AJ005562|Sprr2d|20758|small proline-rich protein 2D	BC111436|Sprr2d|20758|small proline-rich protein 2D
mm9_v1_chr10_+_90038471_90038471	0.200215	NKX3-2.p2	BC098373|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177397|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr13_+_55423357_55423417	0.200115	NKX3-2.p2	AK146857|Prelid1|66494|PRELI domain containing 1	AK153455|Prelid1|66494|PRELI domain containing 1	AK002846|Prelid1|66494|PRELI domain containing 1	AK150465|Prelid1|66494|PRELI domain containing 1	AK151321|Prelid1|66494|PRELI domain containing 1	AK155042|Prelid1|66494|PRELI domain containing 1	AK012144|Prelid1|66494|PRELI domain containing 1	BC025859|Prelid1|66494|PRELI domain containing 1	NM_025596|Prelid1|66494|PRELI domain containing 1	BC098241|Prelid1|66494|PRELI domain containing 1
mm9_v1_chr4_-_131628011_131628011	0.200063	NKX3-2.p2	L00919|Epb4.1|269587|erythrocyte protein band 4.1	NM_183428|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr11_+_78059210_78059318	0.199839	NKX3-2.p2	BC058798|Sdf2|20316|stromal cell derived factor 2	NM_009143|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr2_-_65076584_65076777	0.19859	NKX3-2.p2	AK052533|Cobll1|319876|Cobl-like 1	AK144943|Cobll1|319876|Cobl-like 1	AY308746|Cobll1|319876|Cobl-like 1	BC067007|Cobll1|319876|Cobl-like 1	NM_027225|Cobll1|319876|Cobl-like 1	NM_177025|Cobll1|319876|Cobl-like 1	AK037010|Cobll1|319876|Cobl-like 1
mm9_v1_chr1_+_63319842_63319842	0.198415	NKX3-2.p2	AK015271|Zdbf2|73884|zinc finger, DBF-type containing 2	AK132808|Zdbf2|73884|zinc finger, DBF-type containing 2	NM_028673|Zdbf2|73884|zinc finger, DBF-type containing 2
mm9_v1_chr17_-_6476249_6476283	0.198135	NKX3-2.p2	AK166076|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147312|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147313|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene
mm9_v1_chr17_+_71168939_71168940	0.197927	NKX3-2.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr10_+_122116022_122116053	0.197876	NKX3-2.p2	
mm9_v1_chr12_-_70994089_70994191	0.197786	NKX3-2.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr17_+_6106858_6106923	0.197722	NKX3-2.p2	AK170084|Tulp4|68842|tubby like protein 4	AK160104|Tulp4|68842|tubby like protein 4	AK147643|Tulp4|68842|tubby like protein 4
mm9_v1_chr3_-_94812818_94812845	0.197356	NKX3-2.p2	BC039950|Zfp687|78266|zinc finger protein 687	BC036979|Zfp687|78266|zinc finger protein 687
mm9_v1_chr11_+_70471297_70471326	0.197238	NKX3-2.p2	BC013460|Eno3|13808|enolase 3, beta muscle	NM_007933|Eno3|13808|enolase 3, beta muscle	X62667|Eno3|13808|enolase 3, beta muscle
mm9_v1_chr4_+_115823089_115823207	0.19686	NKX3-2.p2	NM_026651|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	NM_029786|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK002638|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AB053220|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	BC011201|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK183969|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
mm9_v1_chr1_-_36756687_36756877	0.196739	NKX3-2.p2	AK010077|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr13_-_34027824_34027832	0.196558	NKX3-2.p2	BC057950|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm9_v1_chr9_-_50535949_50536088	0.196186	NKX3-2.p2	AY549884|Dixdc1|330938|DIX domain containing 1	AK016205|Dixdc1|330938|DIX domain containing 1	BC048182|Dixdc1|330938|DIX domain containing 1	BC063085|Dixdc1|330938|DIX domain containing 1	AK164424|Dixdc1|330938|DIX domain containing 1	NM_178118|Dixdc1|330938|DIX domain containing 1
mm9_v1_chr6_+_8209296_8209471	0.196178	NKX3-2.p2	AK158918|Gm16039|100036521|predicted gene 16039	AK009885|Gm16039|100036521|predicted gene 16039
mm9_v1_chr12_+_35731853_35731876	0.195556	NKX3-2.p2	AK154425|Snx13|217463|sorting nexin 13	NM_001014973|Snx13|217463|sorting nexin 13	AK166180|Snx13|217463|sorting nexin 13	BC067201|Snx13|217463|sorting nexin 13
mm9_v1_chr11_-_4999069_4999098	0.194092	NKX3-2.p2	AK049743|Ewsr1|14030|Ewing sarcoma breakpoint region 1	NM_007968|Ewsr1|14030|Ewing sarcoma breakpoint region 1	X79233|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK046434|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr15_-_75397030_75397077	0.1933	NKX3-2.p2	AK034884|Ly6h|23934|lymphocyte antigen 6 complex, locus H	NM_001135689|Ly6h|23934|lymphocyte antigen 6 complex, locus H
mm9_v1_chr14_+_52513284_52513333	0.192639	NKX3-2.p2	NM_001039676|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	BC113769|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	AK170178|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	AK089322|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2
mm9_v1_chr8_+_59029896_59029998	0.19255	NKX3-2.p2	AK077595|Fbxo8|50753|F-box protein 8	AK078111|Fbxo8|50753|F-box protein 8	AK012401|Fbxo8|50753|F-box protein 8	AK147748|Fbxo8|50753|F-box protein 8	AK162592|Fbxo8|50753|F-box protein 8	AK002538|Fbxo8|50753|F-box protein 8	BC011100|Fbxo8|50753|F-box protein 8	AF176527|Fbxo8|50753|F-box protein 8	AK029989|Fbxo8|50753|F-box protein 8	NM_015791|Fbxo8|50753|F-box protein 8	AK160145|Fbxo8|50753|F-box protein 8	BC034854|Fbxo8|50753|F-box protein 8
mm9_v1_chr11_+_115048783_115048880	0.19203	NKX3-2.p2	NM_001033393|Tmem104|320534|transmembrane protein 104	AK171314|Tmem104|320534|transmembrane protein 104	AK155041|Tmem104|320534|transmembrane protein 104	AK040894|Tmem104|320534|transmembrane protein 104	AK171457|Tmem104|320534|transmembrane protein 104	AK167098|Tmem104|320534|transmembrane protein 104	AK049868|Tmem104|320534|transmembrane protein 104	BC140976|Tmem104|320534|transmembrane protein 104
mm9_v1_chr11_+_98273930_98273964	0.191559	NKX3-2.p2	AK031099|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK083669|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr13_-_115892027_115892148	0.190787	NKX3-2.p2	BC014765|Itga1|109700|integrin alpha 1	AK169964|Itga1|109700|integrin alpha 1	AK029105|Itga1|109700|integrin alpha 1	AK043769|Itga1|109700|integrin alpha 1	AK077286|Pelo|105083|pelota homolog (Drosophila)	AK141204|Itga1|109700|integrin alpha 1
mm9_v1_chrX_+_71550301_71550377	0.190708	NKX3-2.p2	NM_010273|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr12_-_4344470_4344503	0.190566	NKX3-2.p2	U64606|Ncoa1|17977|nuclear receptor coactivator 1	BC068177|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr1_-_132994093_132994119	0.190383	NKX3-2.p2	X76850|Mapkapk2|17164|MAP kinase-activated protein kinase 2	BC063064|Mapkapk2|17164|MAP kinase-activated protein kinase 2	NM_008551|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr13_-_55672471_55672500	0.190157	NKX3-2.p2	AK155237|Fam193b|212483|family with sequence similarity 193, member B	NM_145382|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr11_-_70458401_70458578	0.18993	NKX3-2.p2	AK202008|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK213339|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK207630|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK213174|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm9_v1_chr6_+_124999976_124999984	0.189788	NKX3-2.p2	AK132705|Acrbp|54137|proacrosin binding protein	AK076691|Acrbp|54137|proacrosin binding protein	BC061122|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr4_-_43536259_43536276	0.189493	NKX3-2.p2	M81086|Tpm2|22004|tropomyosin 2, beta	NM_009416|Tpm2|22004|tropomyosin 2, beta
mm9_v1_chr11_+_96160268_96160437	0.188557	NKX3-2.p2	X56459|Hoxb6|15414|homeobox B6	AK011622|Hoxb6|15414|homeobox B6
mm9_v1_chr2_+_135883662_135883710	0.187938	NKX3-2.p2	NM_029530|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr17_-_79135826_79135867	0.187885	NKX3-2.p2	AJ223777|Strn|268980|striatin, calmodulin binding protein	BC150727|Strn|268980|striatin, calmodulin binding protein
mm9_v1_chr11_-_106576380_106576409	0.187793	NKX3-2.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr11_+_93905557_93905590	0.187314	NKX3-2.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr14_+_31292750_31292775	0.187096	NKX3-2.p2	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr14_-_63864060_63864107	0.186317	NKX3-2.p2	M98339|Gata4|14463|GATA binding protein 4	U85046|Gata4|14463|GATA binding protein 4	NM_008092|Gata4|14463|GATA binding protein 4	AB075549|Gata4|14463|GATA binding protein 4
mm9_v1_chr3_+_89251875_89251915	0.186065	NKX3-2.p2	AK189297|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1
mm9_v1_chr9_+_54765084_54765153	0.18533	NKX3-2.p2	AK085527|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK162425|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	NM_177351|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK138851|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK083218|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK142509|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK163926|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK048771|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	BC038618|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1	AK087279|Agphd1|235386|aminoglycoside phosphotransferase domain containing 1
mm9_v1_chr5_+_76958331_76958438	0.185104	NKX3-2.p2	BC064811|Exoc1|69940|exocyst complex component 1	NM_027270|Exoc1|69940|exocyst complex component 1	AK042620|Exoc1|69940|exocyst complex component 1	AK155980|Exoc1|69940|exocyst complex component 1	BC087543|Exoc1|69940|exocyst complex component 1	BC024678|Exoc1|69940|exocyst complex component 1
mm9_v1_chr14_-_20796411_20796481	0.185046	NKX3-2.p2	AK158697|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	NM_001038637|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	NM_010315|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr4_-_155608885_155608924	0.183743	NKX3-2.p2	AK154523|Klhl17|231003|kelch-like 17 (Drosophila)	AK170825|Klhl17|231003|kelch-like 17 (Drosophila)	BC139309|Klhl17|231003|kelch-like 17 (Drosophila)	AK049214|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr19_+_8894752_8894803	0.183518	NKX3-2.p2	AK032708|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2	DQ000354|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chrX_+_155852439_155852509	0.183445	NKX3-2.p2	NM_001081124|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr4_+_138331649_138331724	0.183332	NKX3-2.p2	AF169407|Pla2g2d|18782|phospholipase A2, group IID	AF169408|Pla2g2d|18782|phospholipase A2, group IID	NM_011109|Pla2g2d|18782|phospholipase A2, group IID	BC111806|Pla2g2d|18782|phospholipase A2, group IID	AK171797|Pla2g2d|18782|phospholipase A2, group IID	AF112983|Pla2g2d|18782|phospholipase A2, group IID	AK018005|Pla2g2d|18782|phospholipase A2, group IID	AK157392|Pla2g2d|18782|phospholipase A2, group IID	AF124374|Pla2g2d|18782|phospholipase A2, group IID	AK158364|Pla2g2d|18782|phospholipase A2, group IID	AK172367|Pla2g2d|18782|phospholipase A2, group IID
mm9_v1_chr19_+_4231881_4231919	0.182724	NKX3-2.p2	NM_027196|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr6_+_125271356_125271401	0.182662	NKX3-2.p2	AK140389|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	NM_011324|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	BC022748|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha
mm9_v1_chr17_+_45570766_45570813	0.182315	NKX3-2.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr16_+_62814501_62814570	0.182143	NKX3-2.p2	BC023414|Stx19|68159|syntaxin 19	NM_026588|Stx19|68159|syntaxin 19	AK020701|Stx19|68159|syntaxin 19	AK076337|Stx19|68159|syntaxin 19
mm9_v1_chr13_-_55932777_55932785	0.181471	NKX3-2.p2	NM_011097|Pitx1|18740|paired-like homeodomain transcription factor 1	U71206|Pitx1|18740|paired-like homeodomain transcription factor 1
mm9_v1_chr5_+_32761533_32761558	0.181365	NKX3-2.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr14_-_52899101_52899219	0.181212	NKX3-2.p2	AK160249|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr16_-_20621287_20621552	0.180698	NKX3-2.p2	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chr14_-_21277869_21277886	0.180496	NKX3-2.p2	AK178718|Anxa7|11750|annexin A7	AK178726|Anxa7|11750|annexin A7
mm9_v1_chr6_+_146837012_146837178	0.180133	NKX3-2.p2	NM_001170433|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_026221|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK146575|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC072603|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK154482|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK173133|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC035209|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm9_v1_chr11_+_105836521_105836521	0.179952	NKX3-2.p2	M55333|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	NM_009598|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr12_-_70993995_70994059	0.179754	NKX3-2.p2	AK019468|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	BC040381|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK032123|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr10_+_44786959_44787139	0.17889	NKX3-2.p2	AK053816|Prep|19072|prolyl endopeptidase	AK163787|Prep|19072|prolyl endopeptidase	AK141851|Prep|19072|prolyl endopeptidase	AK170570|Prep|19072|prolyl endopeptidase	BC012869|Prep|19072|prolyl endopeptidase	NM_011156|Prep|19072|prolyl endopeptidase	AK076257|Prep|19072|prolyl endopeptidase	AK133875|Prep|19072|prolyl endopeptidase	AK161528|Prep|19072|prolyl endopeptidase	BC050830|Prep|19072|prolyl endopeptidase	AB007631|Prep|19072|prolyl endopeptidase
mm9_v1_chr4_+_114285302_114285518	0.178716	NKX3-2.p2	AK040809|Gm12824|666048|predicted gene 12824	BC038617|Gm12824|666048|predicted gene 12824
mm9_v1_chr17_-_85461840_85461859	0.178602	NKX3-2.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr16_-_22121346_22121350	0.178479	NKX3-2.p2	AK170531|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr11_+_103828032_103828117	0.178387	NKX3-2.p2	AK042977|Arf2|11841|ADP-ribosylation factor 2	AK077591|Arf2|11841|ADP-ribosylation factor 2	AK167653|Arf2|11841|ADP-ribosylation factor 2	AK167601|Arf2|11841|ADP-ribosylation factor 2	AK167133|Arf2|11841|ADP-ribosylation factor 2	AK169094|Arf2|11841|ADP-ribosylation factor 2	AK169412|Arf2|11841|ADP-ribosylation factor 2	D87899|Arf2|11841|ADP-ribosylation factor 2	AK031259|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chr12_-_42212538_42212554	0.178309	NKX3-2.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr1_-_95646769_95646865	0.178024	NKX3-2.p2	AK213476|Thap4|67026|THAP domain containing 4	BC013538|Thap4|67026|THAP domain containing 4	AK216112|Thap4|67026|THAP domain containing 4
mm9_v1_chr11_+_101902822_101902904	0.177716	NKX3-2.p2	NM_001160711|Cd300lg|52685|CD300 antigen like family member G	NM_001160712|Cd300lg|52685|CD300 antigen like family member G	NM_001160713|Cd300lg|52685|CD300 antigen like family member G	NM_027987|Cd300lg|52685|CD300 antigen like family member G	AB243063|Cd300lg|52685|CD300 antigen like family member G	AB243064|Cd300lg|52685|CD300 antigen like family member G	AB243065|Cd300lg|52685|CD300 antigen like family member G	AB243066|Cd300lg|52685|CD300 antigen like family member G	AK009375|Cd300lg|52685|CD300 antigen like family member G	BC116906|Cd300lg|52685|CD300 antigen like family member G	BC119315|Cd300lg|52685|CD300 antigen like family member G	AK171982|Cd300lg|52685|CD300 antigen like family member G	AK138920|Cd300lg|52685|CD300 antigen like family member G	AY457055|Cd300lg|52685|CD300 antigen like family member G
mm9_v1_chr3_-_36374739_36374822	0.176868	NKX3-2.p2	NM_009673|Anxa5|11747|annexin A5
mm9_v1_chr16_-_91619237_91619243	0.176708	NKX3-2.p2	BC020175|Dnajc28|246738|DnaJ (Hsp40) homolog, subfamily C, member 28	AK081175|Dnajc28|246738|DnaJ (Hsp40) homolog, subfamily C, member 28	NM_001099738|Dnajc28|246738|DnaJ (Hsp40) homolog, subfamily C, member 28	NM_138664|Dnajc28|246738|DnaJ (Hsp40) homolog, subfamily C, member 28
mm9_v1_chr15_+_81745348_81745391	0.175985	NKX3-2.p2	AK196458|Aco2|11429|aconitase 2, mitochondrial	AK198224|Aco2|11429|aconitase 2, mitochondrial	AK208429|Aco2|11429|aconitase 2, mitochondrial
mm9_v1_chr5_-_124804519_124804530	0.174732	NKX3-2.p2	BC147052|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	BC147053|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr18_-_32196584_32196632	0.174543	NKX3-2.p2	BC138338|Myo7b|17922|myosin VIIB	BC138341|Myo7b|17922|myosin VIIB	NM_032394|Myo7b|17922|myosin VIIB	AF242411|Myo7b|17922|myosin VIIB
mm9_v1_chrX_+_20276894_20276951	0.174472	NKX3-2.p2	AK191787|Cdk16|18555|cyclin-dependent kinase 16	AK206138|Cdk16|18555|cyclin-dependent kinase 16	AK208421|Cdk16|18555|cyclin-dependent kinase 16	AK215824|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr10_-_6980199_6980474	0.174176	NKX3-2.p2	AK042973|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	NM_133485|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK047607|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK085997|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AF407167|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr7_+_28338239_28338353	0.174113	NKX3-2.p2	NM_175107|2310022A10Rik|66367|RIKEN cDNA 2310022A10 gene	BC023369|2310022A10Rik|66367|RIKEN cDNA 2310022A10 gene
mm9_v1_chr12_-_99497634_99497668	0.17364	NKX3-2.p2	AK154760|Galc|14420|galactosylceramidase
mm9_v1_chr15_-_36700634_36700638	0.173206	NKX3-2.p2	AK003664|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr5_-_9725274_9725369	0.172975	NKX3-2.p2	NM_181850|Grm3|108069|glutamate receptor, metabotropic 3
mm9_v1_chrX_+_158155484_158155558	0.172904	NKX3-2.p2	NM_198409|Rai2|24004|retinoic acid induced 2	BC061184|Rai2|24004|retinoic acid induced 2
mm9_v1_chr9_+_47338431_47338446	0.17275	NKX3-2.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr3_+_93123668_93123671	0.172545	NKX3-2.p2	AK041026|Hrnr|68723|hornerin	NM_133698|Hrnr|68723|hornerin
mm9_v1_chr7_+_28018002_28018114	0.172077	NKX3-2.p2	NM_133770|Adck4|76889|aarF domain containing kinase 4	AK002619|Adck4|76889|aarF domain containing kinase 4
mm9_v1_chr1_-_84692352_84692593	0.17134	NKX3-2.p2	AB067650|Dner|227325|delta/notch-like EGF-related receptor	AF370126|Dner|227325|delta/notch-like EGF-related receptor	AY032924|Dner|227325|delta/notch-like EGF-related receptor	AK044597|Dner|227325|delta/notch-like EGF-related receptor	AK030642|Dner|227325|delta/notch-like EGF-related receptor
mm9_v1_chr19_-_18706239_18706339	0.170215	NKX3-2.p2	AK008123|Ostf1|20409|osteoclast stimulating factor 1	AK008467|Ostf1|20409|osteoclast stimulating factor 1	U58888|Ostf1|20409|osteoclast stimulating factor 1	AK145949|Ostf1|20409|osteoclast stimulating factor 1	AK005525|Ostf1|20409|osteoclast stimulating factor 1	AK150145|Ostf1|20409|osteoclast stimulating factor 1	AK155028|Ostf1|20409|osteoclast stimulating factor 1	AK149175|Ostf1|20409|osteoclast stimulating factor 1	AK002899|Ostf1|20409|osteoclast stimulating factor 1	AK010074|Ostf1|20409|osteoclast stimulating factor 1	NM_017375|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chrX_+_132804865_132804886	0.169603	NKX3-2.p2	AF187066|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AK010500|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AF097440|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	BC027815|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr13_-_23837389_23837470	0.169551	NKX3-2.p2	NM_175653|Hist1h3c|319148|histone cluster 1, H3c	BC120800|Hist1h3c|319148|histone cluster 1, H3c	BC120802|Hist1h3c|319148|histone cluster 1, H3c
mm9_v1_chr7_+_31076771_31076772	0.169432	NKX3-2.p2	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr6_-_35489703_35489856	0.168817	NKX3-2.p2	AK151106|Mtpn|14489|myotrophin	AK151147|Mtpn|14489|myotrophin	AK151564|Mtpn|14489|myotrophin	AK152317|Mtpn|14489|myotrophin	AK151687|Mtpn|14489|myotrophin	AK152272|Mtpn|14489|myotrophin	BC043084|Mtpn|14489|myotrophin	AK049398|Mtpn|14489|myotrophin	AK146473|Mtpn|14489|myotrophin	AK145755|Mtpn|14489|myotrophin	D78188|Mtpn|14489|myotrophin	AK002620|Mtpn|14489|myotrophin	AK083888|Mtpn|14489|myotrophin	BC054811|Mtpn|14489|myotrophin	AK150750|Mtpn|14489|myotrophin	AK132029|Mtpn|14489|myotrophin	AK151640|Mtpn|14489|myotrophin	AK151485|Mtpn|14489|myotrophin	AK028027|Mtpn|14489|myotrophin	U20290|Mtpn|14489|myotrophin	AK146305|Mtpn|14489|myotrophin
mm9_v1_chr1_-_166237342_166237430	0.168747	NKX3-2.p2	AK005489|Blzf1|66352|basic leucine zipper nuclear factor 1	AK168933|Blzf1|66352|basic leucine zipper nuclear factor 1	BC027025|Blzf1|66352|basic leucine zipper nuclear factor 1	AK171167|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr11_-_80966253_80966404	0.168653	NKX3-2.p2	BC138530|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	BC138529|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	BC038551|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	NM_007384|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	Y14634|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)
mm9_v1_chr7_-_108025317_108025394	0.168423	NKX3-2.p2	AK033211|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr9_+_47338255_47338425	0.168402	NKX3-2.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr14_-_56332217_56332328	0.168162	NKX3-2.p2	AF186373|Tgm1|21816|transglutaminase 1, K polypeptide	NM_001161714|Tgm1|21816|transglutaminase 1, K polypeptide	NM_001161715|Tgm1|21816|transglutaminase 1, K polypeptide
mm9_v1_chr12_-_85262786_85262867	0.168032	NKX3-2.p2	AK004553|Numb|18222|numb gene homolog (Drosophila)	BC050108|Numb|18222|numb gene homolog (Drosophila)	BC033459|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr11_-_40562196_40562300	0.167951	NKX3-2.p2	
mm9_v1_chr17_-_34137221_34137291	0.167812	NKX3-2.p2	AK150790|H2-K1|14972|histocompatibility 2, K1, K region	AK150967|H2-K1|14972|histocompatibility 2, K1, K region	AK159321|H2-K1|14972|histocompatibility 2, K1, K region	AK160102|H2-K1|14972|histocompatibility 2, K1, K region	AK168517|H2-K1|14972|histocompatibility 2, K1, K region	L23494|H2-K1|14972|histocompatibility 2, K1, K region	L23495|H2-K1|14972|histocompatibility 2, K1, K region	BC151193|H2-K1|14972|histocompatibility 2, K1, K region	AK153419|H2-K1|14972|histocompatibility 2, K1, K region	NM_001001892|H2-K1|14972|histocompatibility 2, K1, K region	AF470231|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr11_-_116099404_116099406	0.167719	NKX3-2.p2	AK036767|Evpl|14027|envoplakin	NM_025276|Evpl|14027|envoplakin
mm9_v1_chr14_+_26661614_26661734	0.166935	NKX3-2.p2	NM_013469|Anxa11|11744|annexin A11	U65986|Anxa11|11744|annexin A11	AK044203|Anxa11|11744|annexin A11	AK140375|Anxa11|11744|annexin A11	AK170850|Anxa11|11744|annexin A11	AK137158|Anxa11|11744|annexin A11	BC012875|Anxa11|11744|annexin A11
mm9_v1_chr15_-_75839859_75839950	0.166412	NKX3-2.p2	AK030392|Fam83h|105732|family with sequence similarity 83, member H	NM_001168253|Fam83h|105732|family with sequence similarity 83, member H
mm9_v1_chr8_+_87604829_87604904	0.166322	NKX3-2.p2	AK010893|BC056474|414077|cDNA sequence BC056474	BC089623|BC056474|414077|cDNA sequence BC056474	NM_001001493|BC056474|414077|cDNA sequence BC056474	BC024937|BC056474|414077|cDNA sequence BC056474	BC091742|BC056474|414077|cDNA sequence BC056474	BC056474|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr3_+_89070473_89070560	0.166035	NKX3-2.p2	AK003223|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	NM_026767|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	BC037761|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3
mm9_v1_chr5_+_111846284_111846381	0.165947	NKX3-2.p2	AK142207|Mn1|433938|meningioma 1
mm9_v1_chr18_+_37925619_37925770	0.165632	NKX3-2.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr1_+_133534852_133534935	0.165495	NKX3-2.p2	AK083315|Ctse|13034|cathepsin E	AK040175|Ctse|13034|cathepsin E	BC005432|Ctse|13034|cathepsin E	NM_007799|Ctse|13034|cathepsin E
mm9_v1_chr18_+_59222034_59222186	0.165417	NKX3-2.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chrX_+_71550669_71550710	0.165361	NKX3-2.p2	BC013758|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AF251042|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK209882|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK179895|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK205324|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK206024|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK206073|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr13_-_64471562_64471599	0.165115	NKX3-2.p2	AF121837|Ctsl|13039|cathepsin L	AF121838|Ctsl|13039|cathepsin L	AF121839|Ctsl|13039|cathepsin L	J02583|Ctsl|13039|cathepsin L	BC068163|Ctsl|13039|cathepsin L	X06086|Ctsl|13039|cathepsin L
mm9_v1_chr5_+_138526345_138526361	0.16466	NKX3-2.p2	BC052441|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK135999|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr14_-_61664997_61665146	0.164004	NKX3-2.p2	AK028146|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19	AF167554|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr3_+_95330700_95330810	0.163649	NKX3-2.p2	AK028366|Ctss|13040|cathepsin S	NM_021281|Ctss|13040|cathepsin S	AJ002386|Ctss|13040|cathepsin S	AK152191|Ctss|13040|cathepsin S	AF038546|Ctss|13040|cathepsin S	AK150274|Ctss|13040|cathepsin S	BC011104|Ctss|13040|cathepsin S	BC002125|Ctss|13040|cathepsin S
mm9_v1_chr4_-_86873866_86873867	0.163147	NKX3-2.p2	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr7_-_133839152_133839297	0.163141	NKX3-2.p2	AK014753|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC145468|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC145688|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK053901|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC055909|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK010828|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK049139|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	NM_029420|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK010748|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
mm9_v1_chr4_-_124527556_124527622	0.162694	NKX3-2.p2	AK021268|1110065P20Rik|68920|RIKEN cDNA 1110065P20 gene	AK004382|1110065P20Rik|68920|RIKEN cDNA 1110065P20 gene
mm9_v1_chr7_+_133572272_133572289	0.162587	NKX3-2.p2	BC015287|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	NM_030566|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2
mm9_v1_chr2_+_28048592_28048772	0.162546	NKX3-2.p2	NM_001038613|Olfm1|56177|olfactomedin 1	NM_001038614|Olfm1|56177|olfactomedin 1	AK003031|Olfm1|56177|olfactomedin 1
mm9_v1_chr14_+_9047015_9047035	0.162144	NKX3-2.p2	AK159067|Kctd6|71393|potassium channel tetramerisation domain containing 6
mm9_v1_chr15_-_98637560_98637620	0.162	NKX3-2.p2	AK164154|Ddn|13199|dendrin
mm9_v1_chr6_+_128612402_128612426	0.161245	NKX3-2.p2	AK136426|Clec2h|94071|C-type lectin domain family 2, member h	AK090364|Clec2h|94071|C-type lectin domain family 2, member h	NM_053165|Clec2h|94071|C-type lectin domain family 2, member h	AK017207|Clec2h|94071|C-type lectin domain family 2, member h	AF350410|Clec2h|94071|C-type lectin domain family 2, member h	BC021766|Clec2h|94071|C-type lectin domain family 2, member h
mm9_v1_chr3_-_109946355_109946392	0.160917	NKX3-2.p2	BC079881|Ntng1|80883|netrin G1	NM_001163348|Ntng1|80883|netrin G1	NM_001163349|Ntng1|80883|netrin G1	NM_001163350|Ntng1|80883|netrin G1	NM_001163351|Ntng1|80883|netrin G1	NM_030699|Ntng1|80883|netrin G1	NM_133488|Ntng1|80883|netrin G1	AK134467|Ntng1|80883|netrin G1
mm9_v1_chr11_-_119971500_119971623	0.160577	NKX3-2.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr1_+_153418580_153418669	0.160108	NKX3-2.p2	AK170193|Fam129a|63913|family with sequence similarity 129, member A	AK136597|Fam129a|63913|family with sequence similarity 129, member A	BC099690|Fam129a|63913|family with sequence similarity 129, member A	BC021332|Fam129a|63913|family with sequence similarity 129, member A	BC069904|Fam129a|63913|family with sequence similarity 129, member A	AB049355|Fam129a|63913|family with sequence similarity 129, member A	BC038006|Fam129a|63913|family with sequence similarity 129, member A
mm9_v1_chr7_+_150293158_150293455	0.159948	NKX3-2.p2	BC045142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	NM_008434|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AK154244|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	BC055304|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AY331142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	U70068|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AB079603|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1
mm9_v1_chr2_+_27297997_27298138	0.15967	NKX3-2.p2	AK081278|D2Bwg1423e|329372|DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed	AK038857|D2Bwg1423e|329372|DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed
mm9_v1_chr4_-_41261905_41261949	0.159583	NKX3-2.p2	NM_026893|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr7_+_16683891_16684052	0.159508	NKX3-2.p2	AK050623|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK171998|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	BC004804|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK013895|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK004826|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK005372|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK136689|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	NM_025898|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha
mm9_v1_chr5_-_144031666_144031702	0.159457	NKX3-2.p2	NM_017467|Zfp316|54201|zinc finger protein 316
mm9_v1_chr13_-_34027843_34027864	0.159321	NKX3-2.p2	AK169145|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK167295|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK033731|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	U25844|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK154700|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	BC006766|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm9_v1_chr11_+_72990584_72990782	0.159206	NKX3-2.p2	AK004963|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_029564|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK168533|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK170485|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK085679|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK150816|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC008166|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC094314|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3
mm9_v1_chr8_-_126417352_126417369	0.159071	NKX3-2.p2	M12233|Acta1|11459|actin, alpha 1, skeletal muscle	X03766|Acta1|11459|actin, alpha 1, skeletal muscle
mm9_v1_chr7_-_20334872_20334921	0.158747	NKX3-2.p2	BC059941|Pvrl2|19294|poliovirus receptor-related 2	NM_001159724|Pvrl2|19294|poliovirus receptor-related 2	NM_008990|Pvrl2|19294|poliovirus receptor-related 2
mm9_v1_chr6_-_35258102_35258131	0.158086	NKX3-2.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chr4_+_43460181_43460289	0.157879	NKX3-2.p2	
mm9_v1_chrX_-_20498021_20498157	0.15731	NKX3-2.p2	BC022954|Syn1|20964|synapsin I	NM_001110780|Syn1|20964|synapsin I	NM_013680|Syn1|20964|synapsin I
mm9_v1_chrX_-_71481072_71481146	0.156566	NKX3-2.p2	BC039208|Flna|192176|filamin, alpha
mm9_v1_chr5_-_136020946_136020998	0.156366	NKX3-2.p2	AK147246|Hip1|215114|huntingtin interacting protein 1	AK147269|Hip1|215114|huntingtin interacting protein 1	AK166346|Hip1|215114|huntingtin interacting protein 1	AK011828|Hip1|215114|huntingtin interacting protein 1	BC017516|Hip1|215114|huntingtin interacting protein 1	AK087586|Hip1|215114|huntingtin interacting protein 1	NM_146001|Hip1|215114|huntingtin interacting protein 1
mm9_v1_chr19_-_38298606_38298649	0.156287	NKX3-2.p2	NM_001081075|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK172241|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK017666|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene
mm9_v1_chr8_-_107871822_107871869	0.156247	NKX3-2.p2	AK030737|Fhod1|234686|formin homology 2 domain containing 1	BC060654|Fhod1|234686|formin homology 2 domain containing 1	NM_177699|Fhod1|234686|formin homology 2 domain containing 1
mm9_v1_chr11_-_115940157_115940300	0.156142	NKX3-2.p2	
mm9_v1_chr8_-_127473082_127473245	0.155329	NKX3-2.p2	NM_053207|Egln1|112405|EGL nine homolog 1 (C. elegans)
mm9_v1_chr11_-_109919796_109919831	0.155244	NKX3-2.p2	AK148846|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a	BC026496|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr15_-_101616888_101616888	0.1551	NKX3-2.p2	NM_213728|Krt72-ps|105866|keratin 72, pseudogene
mm9_v1_chr7_+_150255257_150255421	0.155035	NKX3-2.p2	AB041597|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	AB038011|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	AJ279796|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	AJ279797|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	NM_001115085|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	NM_020285|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	NM_138631|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4	AK088052|Tssc4|56844|tumor-suppressing subchromosomal transferable fragment 4
mm9_v1_chrX_-_139828398_139828438	0.15498	NKX3-2.p2	AK164661|Chrdl1|83453|chordin-like 1	AK142805|Chrdl1|83453|chordin-like 1	BC066832|Chrdl1|83453|chordin-like 1
mm9_v1_chr4_+_129662284_129662511	0.154863	NKX3-2.p2	BC056926|Bai2|230775|brain-specific angiogenesis inhibitor 2	NM_173071|Bai2|230775|brain-specific angiogenesis inhibitor 2	AK158735|Bai2|230775|brain-specific angiogenesis inhibitor 2
mm9_v1_chr4_+_135521079_135521079	0.154354	NKX3-2.p2	BC027438|Gale|74246|galactose-4-epimerase, UDP	NM_178389|Gale|74246|galactose-4-epimerase, UDP
mm9_v1_chr1_-_42749940_42749978	0.1543	NKX3-2.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr7_-_89079168_89079313	0.152996	NKX3-2.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr1_+_194979305_194979357	0.152877	NKX3-2.p2	NM_016851|Irf6|54139|interferon regulatory factor 6	AK143954|Irf6|54139|interferon regulatory factor 6	AK149487|Irf6|54139|interferon regulatory factor 6	AK087631|Irf6|54139|interferon regulatory factor 6	AK143299|Irf6|54139|interferon regulatory factor 6	BC008515|Irf6|54139|interferon regulatory factor 6	U73029|Irf6|54139|interferon regulatory factor 6
mm9_v1_chr11_-_72990492_72990557	0.1527	NKX3-2.p2	NM_001168470|Tmem93|66048|transmembrane protein 93	BC022104|Tmem93|66048|transmembrane protein 93	AK002385|Tmem93|66048|transmembrane protein 93	AK012769|Tmem93|66048|transmembrane protein 93	AK003198|Tmem93|66048|transmembrane protein 93	AK004149|Tmem93|66048|transmembrane protein 93	NM_025318|Tmem93|66048|transmembrane protein 93
mm9_v1_chr7_+_29619155_29619200	0.151835	NKX3-2.p2	BC094008|Lgals4|16855|lectin, galactose binding, soluble 4	AF510729|Lgals4|16855|lectin, galactose binding, soluble 4	BC021632|Lgals4|16855|lectin, galactose binding, soluble 4	BC011236|Lgals4|16855|lectin, galactose binding, soluble 4	AF026794|Lgals6|16857|lectin, galactose binding, soluble 6	NM_010707|Lgals6|16857|lectin, galactose binding, soluble 6
mm9_v1_chr12_-_32635399_32635399	0.151672	NKX3-2.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr16_-_45408997_45409165	0.151016	NKX3-2.p2	AF004023|Cd200|17470|CD200 antigen	BC019172|Cd200|17470|CD200 antigen	AK009051|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	BC051984|Cd200|17470|CD200 antigen	AK164478|Cd200|17470|CD200 antigen	BC054759|Cd200|17470|CD200 antigen	AK131640|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	AK148308|Cd200|17470|CD200 antigen	NM_010818|Cd200|17470|CD200 antigen
mm9_v1_chr16_+_31428833_31428879	0.150701	NKX3-2.p2	AK146321|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK145711|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_001122683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK146962|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr17_+_24625709_24625729	0.15034	NKX3-2.p2	NM_027937|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr4_-_41261874_41261885	0.14947	NKX3-2.p2	AK005099|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK090028|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK030173|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK143635|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr1_+_180117854_180117958	0.149279	NKX3-2.p2	BC002200|Pppde1|78825|PPPDE peptidase domain containing 1	AK160733|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr11_+_76718046_76718079	0.149265	NKX3-2.p2	AK009118|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	NM_025655|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC061082|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC022683|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1
mm9_v1_chr9_-_29770699_29770842	0.148376	NKX3-2.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr4_-_19636000_19636212	0.148376	NKX3-2.p2	AK137588|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	BC026829|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK168567|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK032232|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK042432|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	NM_177327|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr5_+_119214935_119215085	0.147853	NKX3-2.p2	AK083611|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr2_-_34658320_34658334	0.147297	NKX3-2.p2	
mm9_v1_chr17_+_35196041_35196046	0.14707	NKX3-2.p2	AF004106|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr6_+_71222012_71222012	0.146548	NKX3-2.p2	BC069863|Krcc1|57896|lysine-rich coiled-coil 1	NM_145568|Krcc1|57896|lysine-rich coiled-coil 1
mm9_v1_chr9_-_79566271_79566499	0.146302	NKX3-2.p2	U25652|Col12a1|12816|collagen, type XII, alpha 1	NM_007730|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr18_-_6241497_6241528	0.146241	NKX3-2.p2	BC069920|Kif5b|16573|kinesin family member 5B	BC090841|Kif5b|16573|kinesin family member 5B	BC040800|Kif5b|16573|kinesin family member 5B	AK133535|Kif5b|16573|kinesin family member 5B	AK136307|Kif5b|16573|kinesin family member 5B	NM_008448|Kif5b|16573|kinesin family member 5B
mm9_v1_chr18_-_6241487_6241496	0.144888	NKX3-2.p2	BC013817|Kif5b|16573|kinesin family member 5B	BC025864|Kif5b|16573|kinesin family member 5B
mm9_v1_chr12_+_56331411_56331464	0.144301	NKX3-2.p2	AK146826|Srp54c|100101806|signal recognition particle 54C	AK010716|Srp54b|665155|signal recognition particle 54B	BC005543|Srp54c|100101806|signal recognition particle 54C	AK090018|Srp54c|100101806|signal recognition particle 54C	NM_001100110|Srp54c|100101806|signal recognition particle 54C
mm9_v1_chr4_+_134479583_134479637	0.143991	NKX3-2.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr9_+_46049140_46049166	0.143888	NKX3-2.p2	AK168687|Apoa4|11808|apolipoprotein A-IV	AK004856|Apoa4|11808|apolipoprotein A-IV	AK161535|Apoa4|11808|apolipoprotein A-IV	M64248|Apoa4|11808|apolipoprotein A-IV	M64249|Apoa4|11808|apolipoprotein A-IV	M64250|Apoa4|11808|apolipoprotein A-IV	BC010769|Apoa4|11808|apolipoprotein A-IV	BC050149|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr10_-_115910911_115910982	0.143843	NKX3-2.p2	AK013647|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm9_v1_chr4_-_128798939_128798983	0.143417	NKX3-2.p2	NM_001130419|Hpca|15444|hippocalcin
mm9_v1_chr15_-_102019443_102019495	0.143306	NKX3-2.p2	AK005015|Csad|246277|cysteine sulfinic acid decarboxylase	NM_144942|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr3_-_88262982_88263022	0.14285	NKX3-2.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr9_+_107483009_107483202	0.142795	NKX3-2.p2	AK137391|Nat6|56441|N-acetyltransferase 6	AF172275|Nat6|56441|N-acetyltransferase 6
mm9_v1_chr11_+_16951911_16951955	0.141999	NKX3-2.p2	AK019934|Cnrip1|380686|cannabinoid receptor interacting protein 1	BC087946|Cnrip1|380686|cannabinoid receptor interacting protein 1	NM_029861|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr1_-_155033576_155033576	0.141451	NKX3-2.p2	AK147105|Lamc2|16782|laminin, gamma 2	NM_008485|Lamc2|16782|laminin, gamma 2
mm9_v1_chrX_+_70163859_70163948	0.141435	NKX3-2.p2	AF100198|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like	NM_010941|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like	BC052834|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like
mm9_v1_chr3_+_88357674_88357730	0.141176	NKX3-2.p2	AK156515|Ubqln4|94232|ubiquilin 4	AK160578|Ubqln4|94232|ubiquilin 4	BC017686|Ubqln4|94232|ubiquilin 4	AK150211|Ubqln4|94232|ubiquilin 4
mm9_v1_chr11_+_69794546_69794727	0.141115	NKX3-2.p2	AK076150|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	BC018265|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	NM_026017|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	AK012063|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	AK164602|Ctdnep1|67181|CTD nuclear envelope phosphatase 1
mm9_v1_chr2_+_25413360_25413471	0.140796	NKX3-2.p2	AK003557|Edf1|59022|endothelial differentiation-related factor 1	AK002345|Edf1|59022|endothelial differentiation-related factor 1	AK010191|Edf1|59022|endothelial differentiation-related factor 1	AB030185|Edf1|59022|endothelial differentiation-related factor 1	NM_021519|Edf1|59022|endothelial differentiation-related factor 1	BC023472|Edf1|59022|endothelial differentiation-related factor 1	AJ309569|Edf1|59022|endothelial differentiation-related factor 1
mm9_v1_chr2_-_92299870_92299954	0.140666	NKX3-2.p2	AK144762|Slc35c1|228368|solute carrier family 35, member C1	AK138595|Slc35c1|228368|solute carrier family 35, member C1	AK151154|Slc35c1|228368|solute carrier family 35, member C1	NM_211358|Slc35c1|228368|solute carrier family 35, member C1
mm9_v1_chr3_+_92748407_92748407	0.139668	NKX3-2.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr1_+_39251056_39251116	0.138366	NKX3-2.p2	U77969|Npas2|18143|neuronal PAS domain protein 2	BC109166|Npas2|18143|neuronal PAS domain protein 2	NM_008719|Npas2|18143|neuronal PAS domain protein 2
mm9_v1_chr3_+_137528537_137528637	0.138149	NKX3-2.p2	AK204242|H2afz|51788|H2A histone family, member Z
mm9_v1_chr18_-_70301202_70301243	0.137067	NKX3-2.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr14_+_60244117_60244148	0.136796	NKX3-2.p2	NM_145463|Shisa2|219134|shisa homolog 2 (Xenopus laevis)	AK034905|Shisa2|219134|shisa homolog 2 (Xenopus laevis)	AK087512|Shisa2|219134|shisa homolog 2 (Xenopus laevis)
mm9_v1_chr13_-_90229117_90229212	0.136654	NKX3-2.p2	AB055154|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK009951|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK053612|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK088281|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	BC025538|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	NM_028012|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4
mm9_v1_chr6_+_38331516_38331524	0.136406	NKX3-2.p2	AK035185|Ttc26|264134|tetratricopeptide repeat domain 26	BC066060|Ttc26|264134|tetratricopeptide repeat domain 26	NM_153600|Ttc26|264134|tetratricopeptide repeat domain 26	BC031513|Ttc26|264134|tetratricopeptide repeat domain 26	BC066087|Ttc26|264134|tetratricopeptide repeat domain 26
mm9_v1_chr6_-_39507593_39507744	0.13606	NKX3-2.p2	AK160784|Dennd2a|209773|DENN/MADD domain containing 2A	AK167298|Dennd2a|209773|DENN/MADD domain containing 2A	AK165202|Dennd2a|209773|DENN/MADD domain containing 2A	BC056367|Dennd2a|209773|DENN/MADD domain containing 2A	BC057310|Dennd2a|209773|DENN/MADD domain containing 2A	AK047138|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr17_+_35960248_35960280	0.135955	NKX3-2.p2	AK150692|Flot1|14251|flotillin 1
mm9_v1_chr8_+_14095873_14095879	0.135895	NKX3-2.p2	AK032564|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2	NM_001145965|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2	NM_172910|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr11_-_22882120_22882303	0.135884	NKX3-2.p2	AK147766|Commd1|17846|COMM domain containing 1	BC030052|Commd1|17846|COMM domain containing 1	BC038641|Commd1|17846|COMM domain containing 1	D85430|Commd1|17846|COMM domain containing 1	BC051210|Commd1|17846|COMM domain containing 1	AK082909|Commd1|17846|COMM domain containing 1	AK133507|Commd1|17846|COMM domain containing 1	BC132083|Commd1|17846|COMM domain containing 1	BC132085|Commd1|17846|COMM domain containing 1	AB104816|Commd1|17846|COMM domain containing 1	NM_144514|Commd1|17846|COMM domain containing 1
mm9_v1_chr8_-_109580588_109580636	0.135351	NKX3-2.p2	AK145515|Cog8|97484|component of oligomeric golgi complex 8	NM_139229|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr9_-_123022207_123022342	0.134888	NKX3-2.p2	BC052464|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK169197|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC018334|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK018755|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK080541|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK007355|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC005531|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC025126|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK046166|Zdhhc3|69035|zinc finger, DHHC domain containing 3	NM_026917|Zdhhc3|69035|zinc finger, DHHC domain containing 3
mm9_v1_chr19_-_5802596_5802674	0.134689	NKX3-2.p2	AK020134|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	AK019083|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK084336|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK088913|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	EF177380|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	AK009681|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK028133|Ramp2|54409|receptor (calcitonin) activity modifying protein 2
mm9_v1_chr6_+_107479719_107479841	0.13369	NKX3-2.p2	AK139965|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK139355|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK164849|Lrrn1|16979|leucine rich repeat protein 1, neuronal	D45913|Lrrn1|16979|leucine rich repeat protein 1, neuronal	NM_008516|Lrrn1|16979|leucine rich repeat protein 1, neuronal	BC058701|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK160841|Lrrn1|16979|leucine rich repeat protein 1, neuronal
mm9_v1_chr8_+_111482660_111482698	0.133382	NKX3-2.p2	AK031741|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chr5_+_135526788_135526925	0.13335	NKX3-2.p2	
mm9_v1_chr5_+_65221116_65221144	0.133159	NKX3-2.p2	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr2_-_144157430_144157498	0.132363	NKX3-2.p2	AB101296|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr19_+_38470458_38470592	0.13213	NKX3-2.p2	BC137663|Tmem20|240660|transmembrane protein 20	BC137664|Tmem20|240660|transmembrane protein 20	AK041618|Tmem20|240660|transmembrane protein 20	NM_175507|Tmem20|240660|transmembrane protein 20	AK030517|Tmem20|240660|transmembrane protein 20	AK171987|Tmem20|240660|transmembrane protein 20	AK052365|Tmem20|240660|transmembrane protein 20
mm9_v1_chr3_-_152645206_152645210	0.130852	NKX3-2.p2	AK042683|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr11_-_93816916_93817051	0.130623	NKX3-2.p2	EF437324|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK151262|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	BC086892|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	NM_001077529|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in
mm9_v1_chr2_-_34916915_34916960	0.130608	NKX3-2.p2	M35525|Hc|15139|hemolytic complement	M35526|Hc|15139|hemolytic complement	AK080166|Hc|15139|hemolytic complement	NM_010406|Hc|15139|hemolytic complement
mm9_v1_chr16_+_36914313_36914320	0.130506	NKX3-2.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr12_+_39510297_39510297	0.13048	NKX3-2.p2	AK032224|Etv1|14009|ets variant gene 1	NM_001163154|Etv1|14009|ets variant gene 1
mm9_v1_chr6_+_134364445_134364503	0.130352	NKX3-2.p2	AK018579|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK035707|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK008682|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	BC025541|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)
mm9_v1_chr8_+_116963591_116963600	0.130226	NKX3-2.p2	AK019911|Wwox|80707|WW domain-containing oxidoreductase	BC014716|Wwox|80707|WW domain-containing oxidoreductase	AK078528|Wwox|80707|WW domain-containing oxidoreductase	AF187014|Wwox|80707|WW domain-containing oxidoreductase
mm9_v1_chrX_+_70163960_70164000	0.130219	NKX3-2.p2	AK013945|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like	AK088026|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like	AK140930|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like	BC019945|Nsdhl|18194|NAD(P) dependent steroid dehydrogenase-like
mm9_v1_chr17_+_34491766_34491876	0.130198	NKX3-2.p2	AK136521|Btnl2|547431|butyrophilin-like 2	NM_079835|Btnl2|547431|butyrophilin-like 2	BC141103|Btnl2|547431|butyrophilin-like 2
mm9_v1_chr18_-_34166105_34166254	0.129759	NKX3-2.p2	BC089158|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK140485|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr5_-_118605391_118605453	0.129446	NKX3-2.p2	AK034447|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047756|Fbxw8|231672|F-box and WD-40 domain protein 8	BC009095|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047695|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chrX_+_104115963_104116162	0.129205	NKX3-2.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr13_-_12742377_12742693	0.128766	NKX3-2.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK170650|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	BC093499|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AF154337|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK009736|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK170103|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK087190|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK171335|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK010724|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene
mm9_v1_chr4_-_116323979_116324063	0.128241	NKX3-2.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr9_-_119213954_119213965	0.127871	NKX3-2.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chrX_+_71542444_71542520	0.127546	NKX3-2.p2	AK220247|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK158956|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK093961|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	BC048241|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159449|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK168080|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK161631|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK150333|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK166793|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159612|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AB031290|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chr13_-_105844882_105845009	0.127465	NKX3-2.p2	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr4_+_28740314_28740475	0.126741	NKX3-2.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr5_-_77543903_77543908	0.125888	NKX3-2.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr14_+_21527175_21527259	0.125437	NKX3-2.p2	BC085161|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr6_+_24547768_24547771	0.125233	NKX3-2.p2	AK147141|Lmod2|93677|leiomodin 2 (cardiac)	NM_053098|Lmod2|93677|leiomodin 2 (cardiac)
mm9_v1_chr19_-_8783535_8783600	0.124647	NKX3-2.p2	AK197569|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK210586|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr5_+_91360248_91360293	0.124578	NKX3-2.p2	BC054409|Mthfd2l|665563|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	AK049901|Mthfd2l|665563|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
mm9_v1_chr2_-_134469754_134469776	0.124374	NKX3-2.p2	BC050918|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK033111|Tmx4|52837|thioredoxin-related transmembrane protein 4
mm9_v1_chr11_+_78059452_78059655	0.124193	NKX3-2.p2	AK002496|Sdf2|20316|stromal cell derived factor 2	BC062881|Sdf2|20316|stromal cell derived factor 2	BC087871|Sdf2|20316|stromal cell derived factor 2	D50646|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr9_-_44773594_44773682	0.123805	NKX3-2.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr10_-_115910578_115910595	0.1234	NKX3-2.p2	AF215892|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC117779|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_021452|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC048471|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm9_v1_chr5_+_124990703_124991022	0.123235	NKX3-2.p2	BC131977|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC138294|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC083140|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	NM_019770|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK089965|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AB025218|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK179651|Tmed2|56334|transmembrane emp24 domain trafficking protein 2
mm9_v1_chr18_-_6241456_6241485	0.123186	NKX3-2.p2	BC013248|Kif5b|16573|kinesin family member 5B
mm9_v1_chr15_+_83610459_83610521	0.122891	NKX3-2.p2	AK165755|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr8_-_109580546_109580561	0.122637	NKX3-2.p2	AB041610|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr12_+_56499902_56499913	0.122303	NKX3-2.p2	AF060087|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr18_-_38094995_38095137	0.122045	NKX3-2.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr13_-_35118959_35118964	0.122029	NKX3-2.p2	
mm9_v1_chr19_-_5799376_5799434	0.121696	NKX3-2.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr19_+_8945985_8946174	0.121242	NKX3-2.p2	AK172428|Ubxn1|225896|UBX domain protein 1	BC006701|Ubxn1|225896|UBX domain protein 1	NM_146093|Ubxn1|225896|UBX domain protein 1	AK015468|Ubxn1|225896|UBX domain protein 1	AK150442|Ubxn1|225896|UBX domain protein 1	AK159708|Ubxn1|225896|UBX domain protein 1
mm9_v1_chrX_+_34928967_34929045	0.120324	NKX3-2.p2	BC147696|Rhox4d|664610|reproductive homeobox 4D	BC172126|Rhox4b|57737|reproductive homeobox 4B	AJ972668|Rhox4d|664610|reproductive homeobox 4D	NM_001039695|Rhox4d|664610|reproductive homeobox 4D	AB221641|Rhox4d|664610|reproductive homeobox 4D
mm9_v1_chr16_-_20425991_20426058	0.119952	NKX3-2.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr17_+_86577946_86578063	0.119797	NKX3-2.p2	
mm9_v1_chr2_-_103105045_103105100	0.11945	NKX3-2.p2	AK162509|Ehf|13661|ets homologous factor
mm9_v1_chr6_+_129347314_129347343	0.118882	NKX3-2.p2	BC064054|Clec1b|56760|C-type lectin domain family 1, member b	NM_019985|Clec1b|56760|C-type lectin domain family 1, member b	AK007925|Clec1b|56760|C-type lectin domain family 1, member b
mm9_v1_chr6_+_96063137_96063148	0.118561	NKX3-2.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr16_-_78376912_78377061	0.11827	NKX3-2.p2	BC012705|Btg3|12228|B-cell translocation gene 3	AK144415|Btg3|12228|B-cell translocation gene 3	BC094027|Btg3|12228|B-cell translocation gene 3	D83745|Btg3|12228|B-cell translocation gene 3	NM_009770|Btg3|12228|B-cell translocation gene 3	Z72000|Btg3|12228|B-cell translocation gene 3
mm9_v1_chr17_-_26005645_26005674	0.118163	NKX3-2.p2	BC024332|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr14_+_21514178_21514220	0.117571	NKX3-2.p2	NM_028428|Fut11|73068|fucosyltransferase 11	AJ542393|Fut11|73068|fucosyltransferase 11	AK029717|Fut11|73068|fucosyltransferase 11	AK030310|Fut11|73068|fucosyltransferase 11	AK046461|Fut11|73068|fucosyltransferase 11	BC138555|Fut11|73068|fucosyltransferase 11	BC145735|Fut11|73068|fucosyltransferase 11	AK032390|Fut11|73068|fucosyltransferase 11	AK014029|Fut11|73068|fucosyltransferase 11
mm9_v1_chr9_-_21875719_21875761	0.117219	NKX3-2.p2	AK046492|Zfp653|319601|zinc finger protein 653	AK157635|Zfp653|319601|zinc finger protein 653
mm9_v1_chr8_+_108042645_108042656	0.117049	NKX3-2.p2	AK155153|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	NM_008289|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	BC014753|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	BC066209|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2
mm9_v1_chr15_-_39775498_39775574	0.117006	NKX3-2.p2	BC058345|Lrp12|239393|low density lipoprotein-related protein 12
mm9_v1_chr2_+_163820920_163821078	0.116748	NKX3-2.p2	AK150414|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK151294|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK004872|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK011389|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_018753|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AF058797|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK083367|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK158932|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK204033|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC132121|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC138512|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr6_+_41365305_41365305	0.116624	NKX3-2.p2	NM_001003664|Gm5409|386551|predicted pseudogene 5409
mm9_v1_chr15_+_25870456_25870763	0.116367	NKX3-2.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr2_+_49474775_49474833	0.116339	NKX3-2.p2	BC067051|Kif5c|16574|kinesin family member 5C	NM_008449|Kif5c|16574|kinesin family member 5C
mm9_v1_chr11_-_69828831_69828933	0.115783	NKX3-2.p2	Z71189|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	AK076037|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	BC026559|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	NM_017366|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain
mm9_v1_chr4_+_148960604_148960830	0.115763	NKX3-2.p2	BC053843|Clstn1|65945|calsyntenin 1	AJ289016|Clstn1|65945|calsyntenin 1	NM_023051|Clstn1|65945|calsyntenin 1
mm9_v1_chr11_-_51569907_51570119	0.115734	NKX3-2.p2	AK163998|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK031553|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK082810|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK162795|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK082478|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK029139|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK155182|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)
mm9_v1_chr11_-_101285982_101286065	0.115607	NKX3-2.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr5_-_124199380_124199422	0.115384	NKX3-2.p2	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr11_-_30854081_30854140	0.115193	NKX3-2.p2	AK002471|Erlec1|66753|endoplasmic reticulum lectin 1	AK077120|Erlec1|66753|endoplasmic reticulum lectin 1	AK133874|Erlec1|66753|endoplasmic reticulum lectin 1	NM_025745|Erlec1|66753|endoplasmic reticulum lectin 1	BC018468|Erlec1|66753|endoplasmic reticulum lectin 1
mm9_v1_chr2_+_31007833_31007940	0.114866	NKX3-2.p2	NM_178760|Gpr107|277463|G protein-coupled receptor 107	AK082237|Gpr107|277463|G protein-coupled receptor 107	AK030433|Gpr107|277463|G protein-coupled receptor 107	AK154530|Gpr107|277463|G protein-coupled receptor 107	AK083025|Gpr107|277463|G protein-coupled receptor 107	AK088544|Gpr107|277463|G protein-coupled receptor 107	AK034815|Gpr107|277463|G protein-coupled receptor 107	BC117900|Gpr107|277463|G protein-coupled receptor 107	BC117901|Gpr107|277463|G protein-coupled receptor 107	BC092231|Gpr107|277463|G protein-coupled receptor 107	AK036987|Gpr107|277463|G protein-coupled receptor 107	AK142454|Gpr107|277463|G protein-coupled receptor 107	AK129407|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chr8_-_96536437_96536583	0.114766	NKX3-2.p2	BC040338|Amfr|23802|autocrine motility factor receptor	BC034538|Amfr|23802|autocrine motility factor receptor	AK038442|Amfr|23802|autocrine motility factor receptor	AK170716|Amfr|23802|autocrine motility factor receptor	AK157327|Amfr|23802|autocrine motility factor receptor	NM_011787|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr15_-_79158683_79158800	0.114465	NKX3-2.p2	NM_001199023|Pla2g6|53357|phospholipase A2, group VI	NM_001199024|Pla2g6|53357|phospholipase A2, group VI	NM_001199025|Pla2g6|53357|phospholipase A2, group VI	NM_016915|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr2_+_32143769_32143812	0.11399	NKX3-2.p2	AK077516|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_001080968|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_133852|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr7_+_107154913_107155009	0.11319	NKX3-2.p2	NM_133709|Chrdl2|69121|chordin-like 2	BC019399|Chrdl2|69121|chordin-like 2	AF338222|Chrdl2|69121|chordin-like 2
mm9_v1_chr7_-_30303557_30303638	0.112967	NKX3-2.p2	AK172968|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	AK041920|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3
mm9_v1_chr7_-_63274920_63274958	0.112717	NKX3-2.p2	AK166325|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	AY098645|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	BC055828|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	NM_153578|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	AK046619|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
mm9_v1_chr13_-_27702427_27702450	0.112656	NKX3-2.p2	BC116772|Prl7b1|75596|prolactin family 7, subfamily b, member 1	BC119183|Prl7b1|75596|prolactin family 7, subfamily b, member 1	AF525156|Prl7b1|75596|prolactin family 7, subfamily b, member 1	AK005458|Prl7b1|75596|prolactin family 7, subfamily b, member 1	NM_029355|Prl7b1|75596|prolactin family 7, subfamily b, member 1
mm9_v1_chr1_-_186556329_186556486	0.111975	NKX3-2.p2	AK036435|Hlx|15284|H2.0-like homeobox	BC064068|Hlx|15284|H2.0-like homeobox	NM_008250|Hlx|15284|H2.0-like homeobox	X58250|Hlx|15284|H2.0-like homeobox
mm9_v1_chr3_-_138738152_138738164	0.111445	NKX3-2.p2	AK158465|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_001040690|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_145544|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK172052|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr6_-_38826156_38826247	0.110606	NKX3-2.p2	NM_010433|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr3_-_30868320_30868353	0.109757	NKX3-2.p2	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr3_-_119486136_119486235	0.109639	NKX3-2.p2	AK207246|Ptbp2|56195|polypyrimidine tract binding protein 2	AF095718|Ptbp2|56195|polypyrimidine tract binding protein 2	BC010255|Ptbp2|56195|polypyrimidine tract binding protein 2	AK137348|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050624|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050650|Ptbp2|56195|polypyrimidine tract binding protein 2	AK041655|Ptbp2|56195|polypyrimidine tract binding protein 2	AK015056|Ptbp2|56195|polypyrimidine tract binding protein 2
mm9_v1_chr5_-_143666064_143666381	0.109396	NKX3-2.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr3_-_144512249_144512265	0.108603	NKX3-2.p2	BC058766|Clca4|229927|chloride channel calcium activated 4	AY008277|Clca4|229927|chloride channel calcium activated 4	NM_139148|Clca4|229927|chloride channel calcium activated 4
mm9_v1_chr2_+_3630817_3630825	0.108266	NKX3-2.p2	AK019815|Fam107b|66540|family with sequence similarity 107, member B
mm9_v1_chr6_-_49214015_49214054	0.108225	NKX3-2.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr2_-_32568570_32568641	0.10814	NKX3-2.p2	AK155733|Cdk9|107951|cyclin-dependent kinase 9 (CDC2-related kinase)
mm9_v1_chr9_-_64101354_64101425	0.10807	NKX3-2.p2	AK167336|Map2k1|26395|mitogen-activated protein kinase kinase 1	AB041567|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146233|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146931|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK165894|Map2k1|26395|mitogen-activated protein kinase kinase 1	NM_008927|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr18_+_44122894_44122922	0.107882	NKX3-2.p2	AK035690|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AK036804|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AK162690|Spink5|72432|serine peptidase inhibitor, Kazal type 5	NM_001081180|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AJ426449|Spink5|72432|serine peptidase inhibitor, Kazal type 5	BC118011|Spink5|72432|serine peptidase inhibitor, Kazal type 5
mm9_v1_chr19_+_18706439_18706451	0.106949	NKX3-2.p2	AK169962|BC016495|225994|cDNA sequence BC016495
mm9_v1_chr11_+_58120583_58120673	0.106938	NKX3-2.p2	BC055041|Zfp692|103836|zinc finger protein 692	AK154896|Zfp692|103836|zinc finger protein 692	AK031177|Zfp692|103836|zinc finger protein 692	BC145470|Zfp692|103836|zinc finger protein 692	BC150776|Zfp692|103836|zinc finger protein 692
mm9_v1_chr7_-_30066910_30067008	0.106665	NKX3-2.p2	AF099016|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099019|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099020|Spint2|20733|serine protease inhibitor, Kunitz type 2	BC003431|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_001082548|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_011464|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr7_-_138465593_138465805	0.106491	NKX3-2.p2	BC140992|Cuzd1|16433|CUB and zona pellucida-like domains 1	NM_008411|Cuzd1|16433|CUB and zona pellucida-like domains 1	U69699|Cuzd1|16433|CUB and zona pellucida-like domains 1
mm9_v1_chr2_+_49474840_49474940	0.106053	NKX3-2.p2	AK158884|Kif5c|16574|kinesin family member 5C	AB093244|Kif5c|16574|kinesin family member 5C
mm9_v1_chr2_-_144157626_144157845	0.106	NKX3-2.p2	AY090537|Ovol2|107586|ovo-like 2 (Drosophila)	AB101294|Ovol2|107586|ovo-like 2 (Drosophila)	AK167697|Ovol2|107586|ovo-like 2 (Drosophila)	BC031771|Ovol2|107586|ovo-like 2 (Drosophila)	NM_026924|Ovol2|107586|ovo-like 2 (Drosophila)	BC094445|Ovol2|107586|ovo-like 2 (Drosophila)	BC057210|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr10_+_85763303_85763334	0.105856	NKX3-2.p2	BC014713|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr7_-_88490106_88490126	0.105814	NKX3-2.p2	AK012781|Rps17|20068|ribosomal protein S17	AK162335|Rps17|20068|ribosomal protein S17	AK162022|Rps17|20068|ribosomal protein S17	AK167206|Rps17|20068|ribosomal protein S17	BC086900|Rps17|20068|ribosomal protein S17	BC086901|Rps17|20068|ribosomal protein S17	AK010647|Rps17|20068|ribosomal protein S17	NM_009092|Rps17|20068|ribosomal protein S17	AK007992|Rps17|20068|ribosomal protein S17
mm9_v1_chr10_+_61155005_61155061	0.105787	NKX3-2.p2	AK005495|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr2_-_163223660_163223751	0.105174	NKX3-2.p2	AB024447|Jph2|59091|junctophilin 2	NM_021566|Jph2|59091|junctophilin 2	AK157145|Jph2|59091|junctophilin 2
mm9_v1_chr8_+_87162885_87162891	0.105115	NKX3-2.p2	AK132071|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr7_-_20189709_20189838	0.104912	NKX3-2.p2	AF042799|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK009334|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC010728|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC079543|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC103781|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK159443|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC106129|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC060092|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC051916|Clasrp|53609|CLK4-associating serine/arginine rich protein	NM_016680|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr17_+_26792031_26792503	0.104842	NKX3-2.p2	AK010290|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr9_-_44248950_44248950	0.104017	NKX3-2.p2	AK139562|Foxr1|382074|forkhead box R1	NM_001033469|Foxr1|382074|forkhead box R1
mm9_v1_chr10_+_61155390_61155586	0.103786	NKX3-2.p2	AK003538|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr10_+_59342311_59342394	0.103689	NKX3-2.p2	AK038149|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	BC034162|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	NM_019965|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AK166224|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AK172274|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AB028860|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AK089427|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AK172485|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12	AK082546|Dnajb12|56709|DnaJ (Hsp40) homolog, subfamily B, member 12
mm9_v1_chr9_-_44059496_44059546	0.103614	NKX3-2.p2	AF334612|Pdzd3|170761|PDZ domain containing 3	AK052748|Pdzd3|170761|PDZ domain containing 3	NM_133226|Pdzd3|170761|PDZ domain containing 3
mm9_v1_chr8_+_87621368_87621429	0.103561	NKX3-2.p2	AK211157|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr16_+_96422076_96422144	0.103543	NKX3-2.p2	NM_015825|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr5_+_32761560_32761602	0.102318	NKX3-2.p2	AK169379|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr2_+_102546576_102546605	0.102189	NKX3-2.p2	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr8_-_110112352_110112366	0.101612	NKX3-2.p2	AK158379|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC130014|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC013513|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr4_+_41516826_41516894	0.101503	NKX3-2.p2	AK047808|Dnaic1|68922|dynein, axonemal, intermediate chain 1	NM_175138|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138785|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138787|Dnaic1|68922|dynein, axonemal, intermediate chain 1	AK030213|Dnaic1|68922|dynein, axonemal, intermediate chain 1
mm9_v1_chr11_+_98273797_98273840	0.101361	NKX3-2.p2	NM_001003817|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK142296|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC046811|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC053078|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK129487|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr2_+_120834184_120834246	0.100647	NKX3-2.p2	AK154285|Ccndbp1|17151|cyclin D-type binding-protein 1	BC001984|Ccndbp1|17151|cyclin D-type binding-protein 1	AK163150|Ccndbp1|17151|cyclin D-type binding-protein 1	BC005802|Ccndbp1|17151|cyclin D-type binding-protein 1	U50734|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr8_-_114400574_114400649	0.100555	NKX3-2.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr12_+_88607621_88607770	0.100501	NKX3-2.p2	AK165289|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK076069|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK077903|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	BC025552|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	NM_146036|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK166644|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	BC023857|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)
mm9_v1_chr12_+_56937357_56937396	0.10044	NKX3-2.p2	BC034885|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr7_-_129164546_129164728	0.10006	NKX3-2.p2	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr16_-_94592243_94592351	0.0998294	NKX3-2.p2	BC061116|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AK004169|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC096569|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159616|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216306|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr18_-_68459958_68459986	0.0998096	NKX3-2.p2	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr3_+_54496921_54497078	0.0995979	NKX3-2.p2	AF139179|Fam48a|56790|family with sequence similarity 48, member A	NM_019995|Fam48a|56790|family with sequence similarity 48, member A	BC052702|Fam48a|56790|family with sequence similarity 48, member A	AK218402|Fam48a|56790|family with sequence similarity 48, member A
mm9_v1_chr1_+_153418502_153418564	0.0989478	NKX3-2.p2	NM_022018|Fam129a|63913|family with sequence similarity 129, member A
mm9_v1_chr7_+_4095117_4095396	0.0988622	NKX3-2.p2	BC034448|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chr7_-_108080671_108080707	0.0987969	NKX3-2.p2	NM_001081116|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr1_+_36569141_36569293	0.0985306	NKX3-2.p2	BC080275|Cnnm3|94218|cyclin M3
mm9_v1_chr12_+_33638809_33638809	0.0983733	NKX3-2.p2	BC060971|Sypl|19027|synaptophysin-like protein	NM_013635|Sypl|19027|synaptophysin-like protein
mm9_v1_chr9_-_106784619_106784649	0.0982932	NKX3-2.p2	AK162618|Rbm15b|109095|RNA binding motif protein 15B
mm9_v1_chr10_+_127896244_127896376	0.098248	NKX3-2.p2	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr10_+_128242649_128242744	0.0982356	NKX3-2.p2	AK159388|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK083878|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK032681|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK017830|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK082579|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	NM_028873|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr16_+_45158943_45159161	0.0981269	NKX3-2.p2	AK078877|Atg3|67841|autophagy-related 3 (yeast)	BC010809|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr2_+_30027012_30027044	0.0981253	NKX3-2.p2	AK144459|Endog|13804|endonuclease G	AB012108|Endog|13804|endonuclease G	NM_007931|Endog|13804|endonuclease G	BC030177|Endog|13804|endonuclease G
mm9_v1_chr17_+_80526993_80527046	0.0979169	NKX3-2.p2	BC028818|Galm|319625|galactose mutarotase	AK085153|Galm|319625|galactose mutarotase	AK161687|Galm|319625|galactose mutarotase	AK170014|Galm|319625|galactose mutarotase	AK158120|Galm|319625|galactose mutarotase
mm9_v1_chr6_+_88852457_88852516	0.0977	NKX3-2.p2	AK164913|Tpra1|24100|transmembrane protein, adipocyte asscociated 1
mm9_v1_chr11_+_68933954_68933975	0.0973661	NKX3-2.p2	AK050791|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	BC134378|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	NM_033041|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	AB049065|Hes7|84653|hairy and enhancer of split 7 (Drosophila)
mm9_v1_chr1_-_36300951_36301026	0.0968007	NKX3-2.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr6_+_29718490_29718497	0.0967563	NKX3-2.p2	AK014539|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	AB041551|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr7_+_22134391_22134391	0.0964877	NKX3-2.p2	NM_001166739|Vmn1r128|667199|vomeronasal 1 receptor 128
mm9_v1_chr2_-_121944071_121944127	0.0963768	NKX3-2.p2	AK039286|Spg11|214585|spastic paraplegia 11	AK049236|Spg11|214585|spastic paraplegia 11	AK147500|Spg11|214585|spastic paraplegia 11	NM_145531|Spg11|214585|spastic paraplegia 11
mm9_v1_chr16_-_32868355_32868453	0.0963209	NKX3-2.p2	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chrX_+_34847000_34847131	0.0959716	NKX3-2.p2	AJ972666|Rhox4b|57737|reproductive homeobox 4B	NM_021300|Rhox4b|57737|reproductive homeobox 4B	AF265350|Rhox4b|57737|reproductive homeobox 4B	BC172126|Rhox4b|57737|reproductive homeobox 4B	BC172128|Rhox4e|194856|reproductive homeobox 4E	AB221641|Rhox4d|664610|reproductive homeobox 4D
mm9_v1_chr10_-_42198203_42198370	0.0952915	NKX3-2.p2	AF520417|Lace1|215951|lactation elevated 1	AK170996|Lace1|215951|lactation elevated 1	BC089595|Lace1|215951|lactation elevated 1	AK044595|Lace1|215951|lactation elevated 1	NM_145743|Lace1|215951|lactation elevated 1
mm9_v1_chr11_+_63893006_63893054	0.0950736	NKX3-2.p2	AK005116|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr1_+_95375503_95375639	0.0949725	NKX3-2.p2	NM_001159717|Sept2|18000|septin 2	NM_001159718|Sept2|18000|septin 2	NM_010891|Sept2|18000|septin 2	AK146616|Sept2|18000|septin 2	AK151591|Sept2|18000|septin 2	AK028072|Sept2|18000|septin 2	AK171331|Sept2|18000|septin 2	D49382|Sept2|18000|septin 2	NM_001159719|Sept2|18000|septin 2
mm9_v1_chr17_-_34136726_34136785	0.0946404	NKX3-2.p2	BC011306|H2-K1|14972|histocompatibility 2, K1, K region	J00400|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr16_-_46496886_46497132	0.0942751	NKX3-2.p2	AF195834|Pvrl3|58998|poliovirus receptor-related 3	AF195835|Pvrl3|58998|poliovirus receptor-related 3	BC125588|Pvrl3|58998|poliovirus receptor-related 3	BC132187|Pvrl3|58998|poliovirus receptor-related 3	AF195833|Pvrl3|58998|poliovirus receptor-related 3	AK011949|Pvrl3|58998|poliovirus receptor-related 3	NM_021495|Pvrl3|58998|poliovirus receptor-related 3	NM_021496|Pvrl3|58998|poliovirus receptor-related 3	NM_021497|Pvrl3|58998|poliovirus receptor-related 3
mm9_v1_chr18_-_62071451_62071482	0.0942205	NKX3-2.p2	BC094229|Ablim3|319713|actin binding LIM protein family, member 3	AK082380|Ablim3|319713|actin binding LIM protein family, member 3	BC060275|Ablim3|319713|actin binding LIM protein family, member 3	NM_198649|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr11_-_115674905_115674973	0.0934287	NKX3-2.p2	BC053083|Caskin2|140721|CASK-interacting protein 2	NM_080643|Caskin2|140721|CASK-interacting protein 2	AK129297|Caskin2|140721|CASK-interacting protein 2
mm9_v1_chr7_-_54051250_54051427	0.0932546	NKX3-2.p2	BC082542|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005247|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005248|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001167864|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	BC046443|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr2_+_30093236_30093288	0.09263	NKX3-2.p2	NM_177725|Lrrc8a|241296|leucine rich repeat containing 8A
mm9_v1_chrX_+_132804857_132804862	0.0916221	NKX3-2.p2	AK208231|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AK004531|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr12_+_114214947_114214965	0.091454	NKX3-2.p2	AK146991|Btbd6|399566|BTB (POZ) domain containing 6
mm9_v1_chr2_-_13192850_13192974	0.0911792	NKX3-2.p2	X63039|Rsu1|20163|Ras suppressor protein 1	BC003827|Rsu1|20163|Ras suppressor protein 1	NM_009105|Rsu1|20163|Ras suppressor protein 1	AK150011|Rsu1|20163|Ras suppressor protein 1	AK149835|Rsu1|20163|Ras suppressor protein 1	AK152655|Rsu1|20163|Ras suppressor protein 1	AK009288|Rsu1|20163|Ras suppressor protein 1	AK011857|Rsu1|20163|Ras suppressor protein 1	AK135491|Rsu1|20163|Ras suppressor protein 1	AK169076|Rsu1|20163|Ras suppressor protein 1
mm9_v1_chr1_-_153937097_153937320	0.0910601	NKX3-2.p2	AK167392|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC034723|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC055912|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr19_-_32061015_32061042	0.0910388	NKX3-2.p2	AK135485|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr4_-_43575250_43575277	0.0909837	NKX3-2.p2	BC055348|Tln1|21894|talin 1
mm9_v1_chr11_+_119960229_119960267	0.0905174	NKX3-2.p2	NM_001110242|1810043H04Rik|208501|RIKEN cDNA 1810043H04 gene	AK007756|1810043H04Rik|208501|RIKEN cDNA 1810043H04 gene	AK010111|1810043H04Rik|208501|RIKEN cDNA 1810043H04 gene	BC147711|1810043H04Rik|208501|RIKEN cDNA 1810043H04 gene	BC147720|1810043H04Rik|208501|RIKEN cDNA 1810043H04 gene
mm9_v1_chr14_+_66456138_66456255	0.0903581	NKX3-2.p2	AK078345|Ccdc25|67179|coiled-coil domain containing 25	NM_145944|Ccdc25|67179|coiled-coil domain containing 25	AK012172|Ccdc25|67179|coiled-coil domain containing 25	AK139180|Ccdc25|67179|coiled-coil domain containing 25	BC025545|Ccdc25|67179|coiled-coil domain containing 25	AK089982|Ccdc25|67179|coiled-coil domain containing 25	AK016286|Ccdc25|67179|coiled-coil domain containing 25	BC148235|Ccdc25|67179|coiled-coil domain containing 25	BC128015|Ccdc25|67179|coiled-coil domain containing 25
mm9_v1_chr5_-_66418240_66418378	0.0902361	NKX3-2.p2	AK040440|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr1_+_40141586_40141636	0.0900205	NKX3-2.p2	AK132264|Il1r2|16178|interleukin 1 receptor, type II	NM_010555|Il1r2|16178|interleukin 1 receptor, type II	X59769|Il1r2|16178|interleukin 1 receptor, type II	BC032962|Il1r2|16178|interleukin 1 receptor, type II
mm9_v1_chr16_-_38713367_38713386	0.0899194	NKX3-2.p2	AK136348|Arhgap31|12549|Rho GTPase activating protein 31	AK138417|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr1_+_174012909_174013066	0.0894274	NKX3-2.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr13_-_64471609_64471618	0.0884389	NKX3-2.p2	AK011589|Ctsl|13039|cathepsin L	AK147142|Ctsl|13039|cathepsin L	AK002221|Ctsl|13039|cathepsin L	AK049466|Ctsl|13039|cathepsin L	AK145051|Ctsl|13039|cathepsin L	AK150452|Ctsl|13039|cathepsin L	AK151169|Ctsl|13039|cathepsin L	AK153076|Ctsl|13039|cathepsin L	AK153417|Ctsl|13039|cathepsin L	AK159511|Ctsl|13039|cathepsin L	AK160100|Ctsl|13039|cathepsin L	AK161538|Ctsl|13039|cathepsin L	AK165397|Ctsl|13039|cathepsin L	AK169394|Ctsl|13039|cathepsin L	NM_009984|Ctsl|13039|cathepsin L	AK169712|Ctsl|13039|cathepsin L
mm9_v1_chr3_-_108218411_108218411	0.0884192	NKX3-2.p2	AB028499|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_001004177|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_017392|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm9_v1_chr8_+_3587449_3587449	0.0881016	NKX3-2.p2	NM_001163749|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene	NM_027171|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene
mm9_v1_chr11_+_51912342_51912394	0.0879374	NKX3-2.p2	BC003856|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AK172644|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AF076192|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	BC054458|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr5_-_87964170_87964216	0.0879293	NKX3-2.p2	BC024361|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr6_+_45010040_45010086	0.0875492	NKX3-2.p2	NM_001004357|Cntnap2|66797|contactin associated protein-like 2	AK129232|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr2_-_35992076_35992223	0.0873085	NKX3-2.p2	AK008110|Rbm18|67889|RNA binding motif protein 18	AK021243|Rbm18|67889|RNA binding motif protein 18	AK036252|Rbm18|67889|RNA binding motif protein 18	BC005540|Rbm18|67889|RNA binding motif protein 18	AK035348|Rbm18|67889|RNA binding motif protein 18	AK036220|Rbm18|67889|RNA binding motif protein 18	AK135109|Rbm18|67889|RNA binding motif protein 18	NM_001159635|Rbm18|67889|RNA binding motif protein 18	NM_026434|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr2_-_147871630_147871640	0.0869556	NKX3-2.p2	AB231453|Foxa2|15376|forkhead box A2	L10409|Foxa2|15376|forkhead box A2
mm9_v1_chr12_-_46175310_46175359	0.0865168	NKX3-2.p2	BC024598|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr4_+_129277911_129277964	0.0863336	NKX3-2.p2	AK045767|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	AK016715|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	AK005111|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	AK171961|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	AK050648|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	BC024696|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	BC025081|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene	NM_029748|2510006D16Rik|76799|RIKEN cDNA 2510006D16 gene
mm9_v1_chr6_-_5143755_5143945	0.086047	NKX3-2.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr9_-_21875603_21875617	0.0857061	NKX3-2.p2	AK089104|Zfp653|319601|zinc finger protein 653
mm9_v1_chr2_-_127073464_127073551	0.0855837	NKX3-2.p2	AK028376|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	AK004129|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	AK002314|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	NM_025296|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)
mm9_v1_chr2_+_32143868_32143875	0.0849311	NKX3-2.p2	BC011407|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chrX_+_132804834_132804853	0.0849064	NKX3-2.p2	AK003294|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr2_+_109514856_109514856	0.0846367	NKX3-2.p2	AY057908|Bdnf|12064|brain derived neurotrophic factor	EF125669|Bdnf|12064|brain derived neurotrophic factor	NM_007540|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr11_+_61890494_61890602	0.0844309	NKX3-2.p2	AK050982|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	AK220465|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	NM_001029936|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chr10_+_86241749_86241796	0.0835993	NKX3-2.p2	NM_175331|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK147488|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK172248|Nt5dc3|103466|5'-nucleotidase domain containing 3
mm9_v1_chr15_-_36937065_36937180	0.0829658	NKX3-2.p2	AK132053|Zfp706|68036|zinc finger protein 706	AK167897|Zfp706|68036|zinc finger protein 706	AK168303|Zfp706|68036|zinc finger protein 706	BC054356|Zfp706|68036|zinc finger protein 706	AK167791|Zfp706|68036|zinc finger protein 706	BC052459|Zfp706|68036|zinc finger protein 706	NM_026521|Zfp706|68036|zinc finger protein 706
mm9_v1_chr3_+_92483168_92483168	0.0828991	NKX3-2.p2	AK003705|Lce1c|73719|late cornified envelope 1C	NM_028622|Lce1c|73719|late cornified envelope 1C
mm9_v1_chr6_-_86798929_86799146	0.08269	NKX3-2.p2	BC096561|2610306M01Rik|67170|RIKEN cDNA 2610306M01 gene	BC058130|2610306M01Rik|67170|RIKEN cDNA 2610306M01 gene
mm9_v1_chr2_-_26244767_26244830	0.0826349	NKX3-2.p2	BC031199|Sdccag3|68112|serologically defined colon cancer antigen 3	AK014885|Sdccag3|68112|serologically defined colon cancer antigen 3	BC061037|Sdccag3|68112|serologically defined colon cancer antigen 3	AK082787|Sdccag3|68112|serologically defined colon cancer antigen 3	AK163690|Sdccag3|68112|serologically defined colon cancer antigen 3	AK021273|Sdccag3|68112|serologically defined colon cancer antigen 3	BC005612|Sdccag3|68112|serologically defined colon cancer antigen 3
mm9_v1_chr10_-_77815056_77815248	0.0823032	NKX3-2.p2	AK008965|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3
mm9_v1_chr6_+_114593104_114593174	0.0821748	NKX3-2.p2	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chrX_-_17149313_17149460	0.0818677	NKX3-2.p2	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr8_-_42459932_42460052	0.0817535	NKX3-2.p2	AK150567|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151312|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152811|Asah1|11886|N-acylsphingosine amidohydrolase 1	BC003204|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK153297|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK075666|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK159556|Asah1|11886|N-acylsphingosine amidohydrolase 1	AF157500|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK166757|Asah1|11886|N-acylsphingosine amidohydrolase 1	AF352179|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK090314|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK075919|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK077721|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152305|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152920|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK153101|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151478|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151208|Asah1|11886|N-acylsphingosine amidohydrolase 1	NM_019734|Asah1|11886|N-acylsphingosine amidohydrolase 1
mm9_v1_chr8_-_119517339_119517451	0.081695	NKX3-2.p2	AK003788|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	AK019983|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	NM_026572|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	BC014745|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	AK050373|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)
mm9_v1_chr14_-_56751384_56751444	0.0816529	NKX3-2.p2	BC141122|Gzmd|14941|granzyme D	BC145433|Gzmd|14941|granzyme D	BC145434|Gzmd|14941|granzyme D	AK131671|Gzmd|14941|granzyme D	NM_010372|Gzmd|14941|granzyme D	J03255|Gzmd|14941|granzyme D
mm9_v1_chr15_+_81767370_81767389	0.0814299	NKX3-2.p2	BC016109|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr19_+_42221868_42221945	0.0813275	NKX3-2.p2	NM_183195|Marveld1|277010|MARVEL (membrane-associating) domain containing 1	AK132243|Marveld1|277010|MARVEL (membrane-associating) domain containing 1	BC054384|Marveld1|277010|MARVEL (membrane-associating) domain containing 1
mm9_v1_chr3_-_92819586_92819610	0.0804083	NKX3-2.p2	BC060280|Crct1|74175|cysteine-rich C-terminal 1	AK009010|Crct1|74175|cysteine-rich C-terminal 1	NM_028798|Crct1|74175|cysteine-rich C-terminal 1
mm9_v1_chr16_+_29579427_29579538	0.0803566	NKX3-2.p2	AB044138|Opa1|74143|optic atrophy 1 homolog (human)	NM_133752|Opa1|74143|optic atrophy 1 homolog (human)	AK029157|Opa1|74143|optic atrophy 1 homolog (human)	AK053861|Opa1|74143|optic atrophy 1 homolog (human)	AK004715|Opa1|74143|optic atrophy 1 homolog (human)	AK030835|Opa1|74143|optic atrophy 1 homolog (human)	AK145620|Opa1|74143|optic atrophy 1 homolog (human)	AK038446|Opa1|74143|optic atrophy 1 homolog (human)	BC052704|Opa1|74143|optic atrophy 1 homolog (human)	AK050383|Opa1|74143|optic atrophy 1 homolog (human)	AK164872|Opa1|74143|optic atrophy 1 homolog (human)	AK044657|Opa1|74143|optic atrophy 1 homolog (human)	BC138665|Opa1|74143|optic atrophy 1 homolog (human)	BC145959|Opa1|74143|optic atrophy 1 homolog (human)
mm9_v1_chrX_-_159402465_159402479	0.0799763	NKX3-2.p2	BC010751|S100g|12309|S100 calcium binding protein G
mm9_v1_chr19_+_46673553_46673665	0.0799559	NKX3-2.p2	NM_001177812|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_146099|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK087487|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC026369|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK154686|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK169294|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC058949|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr5_-_65826969_65827179	0.0799397	NKX3-2.p2	AK167560|Ugdh|22235|UDP-glucose dehydrogenase	BC006749|Ugdh|22235|UDP-glucose dehydrogenase	NM_009466|Ugdh|22235|UDP-glucose dehydrogenase	AK169208|Ugdh|22235|UDP-glucose dehydrogenase	AK144673|Ugdh|22235|UDP-glucose dehydrogenase
mm9_v1_chr7_-_26175113_26175168	0.0799383	NKX3-2.p2	BC021642|Lipe|16890|lipase, hormone sensitive	AK169858|Lipe|16890|lipase, hormone sensitive	NM_001039507|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr16_+_13986691_13986753	0.0797155	NKX3-2.p2	AK049997|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK076136|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK139470|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK136859|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	NM_144518|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK019307|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	BC022741|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK035868|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene
mm9_v1_chr11_-_103224972_103225005	0.0795781	NKX3-2.p2	
mm9_v1_chr19_-_4163244_4163282	0.0794596	NKX3-2.p2	AJ007938|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	NM_021485|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2	BC005694|Rps6kb2|58988|ribosomal protein S6 kinase, polypeptide 2
mm9_v1_chr15_-_102019373_102019395	0.0792465	NKX3-2.p2	AY033912|Csad|246277|cysteine sulfinic acid decarboxylase	AK186014|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr10_-_59414516_59414582	0.0786007	NKX3-2.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr2_+_162760505_162760606	0.0785035	NKX3-2.p2	
mm9_v1_chrX_+_132804791_132804829	0.0780019	NKX3-2.p2	NM_001110233|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_001110234|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_009750|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr11_+_115836022_115836269	0.0779367	NKX3-2.p2	L04678|Itgb4|192897|integrin beta 4	AK147424|Itgb4|192897|integrin beta 4	NM_001005608|Itgb4|192897|integrin beta 4	NM_133663|Itgb4|192897|integrin beta 4	AK048888|Itgb4|192897|integrin beta 4
mm9_v1_chr11_+_70318775_70318815	0.0776711	NKX3-2.p2	NM_029360|Tm4sf5|75604|transmembrane 4 superfamily member 5	AK008064|Tm4sf5|75604|transmembrane 4 superfamily member 5	BC010782|Tm4sf5|75604|transmembrane 4 superfamily member 5
mm9_v1_chr15_+_99125768_99125839	0.0772448	NKX3-2.p2	AF135440|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	NM_018786|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm9_v1_chr11_+_68884268_68884388	0.0771162	NKX3-2.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chr19_-_6915038_6915131	0.0771115	NKX3-2.p2	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chr7_-_134028480_134028480	0.0767295	NKX3-2.p2	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr5_-_137521896_137522032	0.0765513	NKX3-2.p2	AK002225|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	M62418|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	NM_007457|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	BC052692|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr1_-_20608010_20608144	0.0765339	NKX3-2.p2	AY438374|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK143992|Pkhd1|241035|polycystic kidney and hepatic disease 1	AY130764|Pkhd1|241035|polycystic kidney and hepatic disease 1	NM_153179|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK052698|Pkhd1|241035|polycystic kidney and hepatic disease 1
mm9_v1_chr3_-_90237092_90237456	0.0763872	NKX3-2.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr14_+_56129440_56129463	0.0760859	NKX3-2.p2	AK134548|Cpne6|12891|copine VI	AK144410|Cpne6|12891|copine VI	BC050766|Cpne6|12891|copine VI
mm9_v1_chr19_+_8994949_8995109	0.0760592	NKX3-2.p2	AK146264|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK013004|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AB019523|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC002103|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK219513|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr2_-_12340979_12341107	0.0759572	NKX3-2.p2	BC027202|Fam188a|66960|family with sequence similarity 188, member A	AK002900|Fam188a|66960|family with sequence similarity 188, member A	AK143250|Fam188a|66960|family with sequence similarity 188, member A	AK010050|Fam188a|66960|family with sequence similarity 188, member A	AK049869|Fam188a|66960|family with sequence similarity 188, member A	AK009891|Fam188a|66960|family with sequence similarity 188, member A	AK049694|Fam188a|66960|family with sequence similarity 188, member A	BC002225|Fam188a|66960|family with sequence similarity 188, member A	AK075792|Fam188a|66960|family with sequence similarity 188, member A	NM_024185|Fam188a|66960|family with sequence similarity 188, member A
mm9_v1_chrX_-_50723622_50723678	0.0758037	NKX3-2.p2	BC100442|Mospd1|70380|motile sperm domain containing 1	BC018329|Mospd1|70380|motile sperm domain containing 1	BC085100|Mospd1|70380|motile sperm domain containing 1	AK007533|Mospd1|70380|motile sperm domain containing 1	NM_027409|Mospd1|70380|motile sperm domain containing 1	AK088275|Mospd1|70380|motile sperm domain containing 1	AK139795|Mospd1|70380|motile sperm domain containing 1
mm9_v1_chrX_-_34731084_34731232	0.0757619	NKX3-2.p2	CT010398|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	AK007840|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	BC024364|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	NM_019443|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1
mm9_v1_chr3_-_138738059_138738141	0.0753826	NKX3-2.p2	AK164159|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK166315|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK154852|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK155793|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK160989|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK052125|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr2_+_165420527_165420536	0.0752022	NKX3-2.p2	AK141765|Eya2|14049|eyes absent 2 homolog (Drosophila)	AK137718|Eya2|14049|eyes absent 2 homolog (Drosophila)
mm9_v1_chr7_-_20214596_20214811	0.0751011	NKX3-2.p2	DQ020178|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020179|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020180|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020181|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC034523|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	M83380|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC117793|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK156767|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK146932|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC019765|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	NM_009046|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B
mm9_v1_chr11_+_75323840_75323968	0.0748654	NKX3-2.p2	AK160517|Rilp|280408|Rab interacting lysosomal protein
mm9_v1_chr1_+_9591550_9591585	0.0744246	NKX3-2.p2	BC066997|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr1_+_189821727_189821874	0.0742357	NKX3-2.p2	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr3_+_145883924_145883983	0.0740734	NKX3-2.p2	NM_022983|Lpar3|65086|lysophosphatidic acid receptor 3	AK042255|Lpar3|65086|lysophosphatidic acid receptor 3	AK042084|Lpar3|65086|lysophosphatidic acid receptor 3	AF293845|Lpar3|65086|lysophosphatidic acid receptor 3	AK132289|Lpar3|65086|lysophosphatidic acid receptor 3
mm9_v1_chr1_-_170362244_170362272	0.0740413	NKX3-2.p2	BC054376|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK037006|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr1_-_186669499_186669729	0.0739708	NKX3-2.p2	AK178160|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK180823|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC006888|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC042686|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK002874|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK051230|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK078650|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	NM_133684|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK017150|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2
mm9_v1_chr9_-_115152128_115152185	0.0736444	NKX3-2.p2	
mm9_v1_chr17_+_15533165_15533243	0.0733209	NKX3-2.p2	BC066088|Fam120b|67544|family with sequence similarity 120, member B	NM_024203|Fam120b|67544|family with sequence similarity 120, member B	BC085163|Fam120b|67544|family with sequence similarity 120, member B	AK078215|Fam120b|67544|family with sequence similarity 120, member B	AK161912|Fam120b|67544|family with sequence similarity 120, member B	AK051767|Fam120b|67544|family with sequence similarity 120, member B	DQ873694|Fam120b|67544|family with sequence similarity 120, member B	AK132211|Fam120b|67544|family with sequence similarity 120, member B	AK016568|Fam120b|67544|family with sequence similarity 120, member B	AK076185|Fam120b|67544|family with sequence similarity 120, member B
mm9_v1_chr17_-_11033034_11033056	0.0732434	NKX3-2.p2	BC120740|Pacrg|69310|PARK2 co-regulated	AK005771|Pacrg|69310|PARK2 co-regulated	AK135510|Pacrg|69310|PARK2 co-regulated	NM_027032|Pacrg|69310|PARK2 co-regulated
mm9_v1_chr7_+_21357946_21357946	0.0730992	NKX3-2.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr7_+_31497227_31497370	0.0728613	NKX3-2.p2	AK143905|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	BC015262|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	NM_018731|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	U17282|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide
mm9_v1_chr3_+_88357635_88357640	0.0726677	NKX3-2.p2	AB040050|Ubqln4|94232|ubiquilin 4	NM_033526|Ubqln4|94232|ubiquilin 4
mm9_v1_chr7_+_138079669_138079779	0.0725683	NKX3-2.p2	NM_019564|Htra1|56213|HtrA serine peptidase 1	AK128916|Htra1|56213|HtrA serine peptidase 1	AK132270|Htra1|56213|HtrA serine peptidase 1	AF179369|Htra1|56213|HtrA serine peptidase 1	AF172994|Htra1|56213|HtrA serine peptidase 1	BC013516|Htra1|56213|HtrA serine peptidase 1
mm9_v1_chr14_+_30822097_30822350	0.0722568	NKX3-2.p2	NM_001136240|Chdh|218865|choline dehydrogenase	AK052715|Chdh|218865|choline dehydrogenase	AK087570|Chdh|218865|choline dehydrogenase	AK164042|Chdh|218865|choline dehydrogenase
mm9_v1_chr12_-_86691817_86691869	0.0720625	NKX3-2.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr5_+_125365789_125365870	0.0719452	NKX3-2.p2	BC096550|Zfp664|269704|zinc finger protein 664
mm9_v1_chr11_-_35612385_35612385	0.0715318	NKX3-2.p2	NM_001004147|Fbll1|237730|fibrillarin-like 1
mm9_v1_chr7_+_134072351_134072419	0.0712155	NKX3-2.p2	AK075722|Kctd13|233877|potassium channel tetramerisation domain containing 13	NM_172747|Kctd13|233877|potassium channel tetramerisation domain containing 13	BC079607|Kctd13|233877|potassium channel tetramerisation domain containing 13	AF534881|Kctd13|233877|potassium channel tetramerisation domain containing 13
mm9_v1_chr6_+_88053362_88053458	0.0711567	NKX3-2.p2	AK213986|Rpn1|103963|ribophorin I
mm9_v1_chr18_-_68459753_68459929	0.0711186	NKX3-2.p2	BC038695|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	BC095936|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK159319|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK142190|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK147662|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK034980|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK162396|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK044238|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK049567|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr7_+_52419289_52419313	0.0710888	NKX3-2.p2	NM_182993|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr7_-_31699850_31699885	0.0706115	NKX3-2.p2	M31811|Mag|17136|myelin-associated glycoprotein	NM_010758|Mag|17136|myelin-associated glycoprotein	AK003029|Mag|17136|myelin-associated glycoprotein
mm9_v1_chr11_-_94937951_94938027	0.0705957	NKX3-2.p2	BC053031|Itga3|16400|integrin alpha 3	NM_013565|Itga3|16400|integrin alpha 3
mm9_v1_chr12_+_78339999_78340029	0.070482	NKX3-2.p2	AK048520|Fut8|53618|fucosyltransferase 8	NM_016893|Fut8|53618|fucosyltransferase 8	AK163494|Fut8|53618|fucosyltransferase 8
mm9_v1_chr9_+_106366204_106366267	0.0703762	NKX3-2.p2	
mm9_v1_chr7_+_53039273_53039322	0.0702716	NKX3-2.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr14_-_70605828_70605932	0.0697727	NKX3-2.p2	AB190911|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr11_-_69575192_69575469	0.0696507	NKX3-2.p2	AF016712|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137893|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137894|Amac1|56293|acyl-malonyl condensing enzyme 1	NM_019871|Amac1|56293|acyl-malonyl condensing enzyme 1	AK077181|Amac1|56293|acyl-malonyl condensing enzyme 1
mm9_v1_chr9_-_97011440_97011575	0.0695415	NKX3-2.p2	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr7_-_53998304_53998352	0.0686373	NKX3-2.p2	BC052495|Saa1|20208|serum amyloid A 1	L22190|Saa2|20209|serum amyloid A 2	AK136475|Saa1|20208|serum amyloid A 1	BC087933|Saa1|20208|serum amyloid A 1	NM_009117|Saa1|20208|serum amyloid A 1
mm9_v1_chr5_+_138526303_138526341	0.0685843	NKX3-2.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr6_-_55631085_55631098	0.0685604	NKX3-2.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr2_-_166774855_166774859	0.0681919	NKX3-2.p2	AK177619|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK189331|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)
mm9_v1_chr10_+_126857922_126857922	0.0678717	NKX3-2.p2	AK043545|R3hdm2|71750|R3H domain containing 2	NM_001168293|R3hdm2|71750|R3H domain containing 2	NM_027900|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr15_+_99239550_99239559	0.0674797	NKX3-2.p2	BC018591|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr1_+_34636537_34636571	0.0674677	NKX3-2.p2	NM_213727|Fam123c|211383|family with sequence similarity 123, member C	BC070435|Fam123c|211383|family with sequence similarity 123, member C
mm9_v1_chr19_+_56798916_56798947	0.0674507	NKX3-2.p2	AK039569|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr1_+_60466462_60466491	0.0667785	NKX3-2.p2	NM_001198570|Abi2|329165|abl-interactor 2	NM_001198571|Abi2|329165|abl-interactor 2	NM_198127|Abi2|329165|abl-interactor 2
mm9_v1_chr5_-_31593411_31593494	0.0666588	NKX3-2.p2	AK144190|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	AY339616|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	BC042583|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	AK043642|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	BC066096|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	NM_026298|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)
mm9_v1_chr19_-_45080871_45080957	0.066316	NKX3-2.p2	BC027676|Mrpl43|94067|mitochondrial ribosomal protein L43	BC065812|Mrpl43|94067|mitochondrial ribosomal protein L43	AK076204|Mrpl43|94067|mitochondrial ribosomal protein L43	AB049657|Mrpl43|94067|mitochondrial ribosomal protein L43	AK015357|Mrpl43|94067|mitochondrial ribosomal protein L43	BC048733|Mrpl43|94067|mitochondrial ribosomal protein L43	NM_053164|Mrpl43|94067|mitochondrial ribosomal protein L43
mm9_v1_chr8_+_96561180_96561211	0.0659454	NKX3-2.p2	AK122532|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK164189|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr12_+_8681486_8681486	0.0656984	NKX3-2.p2	AF315590|Pum2|80913|pumilio 2 (Drosophila)	NM_030723|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr11_+_84008939_84008965	0.0654115	NKX3-2.p2	NM_133360|Acaca|107476|acetyl-Coenzyme A carboxylase alpha	AY451393|Acaca|107476|acetyl-Coenzyme A carboxylase alpha
mm9_v1_chr4_+_43740152_43740309	0.0650888	NKX3-2.p2	BC096573|Hrct1|100039781|histidine rich carboxyl terminus 1
mm9_v1_chr8_+_125935441_125935463	0.0643889	NKX3-2.p2	AK012528|Tubb3|22152|tubulin, beta 3	AK051298|Tubb3|22152|tubulin, beta 3	AK082942|Tubb3|22152|tubulin, beta 3	AK149014|Tubb3|22152|tubulin, beta 3	BC088749|Tubb3|22152|tubulin, beta 3	BC031357|Tubb3|22152|tubulin, beta 3	NM_023279|Tubb3|22152|tubulin, beta 3
mm9_v1_chr15_-_94234778_94234782	0.0642006	NKX3-2.p2	AK145288|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164785|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164786|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_177431|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm9_v1_chr1_+_169528492_169528646	0.063789	NKX3-2.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr14_+_21167481_21167541	0.0635358	NKX3-2.p2	AK077495|Fam149b|105428|family with sequence similarity 149, member B	BC057907|Fam149b|105428|family with sequence similarity 149, member B	BC069846|Fam149b|105428|family with sequence similarity 149, member B	BC025183|Fam149b|105428|family with sequence similarity 149, member B	AK037808|Fam149b|105428|family with sequence similarity 149, member B	BC058650|Fam149b|105428|family with sequence similarity 149, member B	BC059221|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr18_-_32109233_32109289	0.0627846	NKX3-2.p2	BC070439|Gpr17|574402|G protein-coupled receptor 17	NM_001025381|Gpr17|574402|G protein-coupled receptor 17
mm9_v1_chr6_-_97262013_97262028	0.0625553	NKX3-2.p2	BC058262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr3_+_116265890_116265995	0.0623573	NKX3-2.p2	AK035072|Lrrc39|109245|leucine rich repeat containing 39	NM_027321|Lrrc39|109245|leucine rich repeat containing 39	NM_175413|Lrrc39|109245|leucine rich repeat containing 39	AK039277|Lrrc39|109245|leucine rich repeat containing 39	AK079125|Lrrc39|109245|leucine rich repeat containing 39	AK008119|Lrrc39|109245|leucine rich repeat containing 39	AK052159|Lrrc39|109245|leucine rich repeat containing 39	BC119529|Lrrc39|109245|leucine rich repeat containing 39	BC119530|Lrrc39|109245|leucine rich repeat containing 39	AK046671|Lrrc39|109245|leucine rich repeat containing 39
mm9_v1_chr17_+_35607497_35607530	0.0621919	NKX3-2.p2	K00614|H2-Q10|15007|histocompatibility 2, Q region locus 10
mm9_v1_chr4_-_135528494_135528534	0.0618492	NKX3-2.p2	AK167478|Lypla2|26394|lysophospholipase 2	AK089112|Lypla2|26394|lysophospholipase 2	AK075590|Lypla2|26394|lysophospholipase 2	AB009653|Lypla2|26394|lysophospholipase 2	NM_011942|Lypla2|26394|lysophospholipase 2	BC068120|Lypla2|26394|lysophospholipase 2
mm9_v1_chr5_+_32913539_32913707	0.0616507	NKX3-2.p2	AK035612|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	AK031316|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	AK052478|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	NM_009535|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	X67677|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	BC010594|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm9_v1_chr1_+_136391318_136391329	0.060856	NKX3-2.p2	AK156126|Rabif|98710|RAB interacting factor
mm9_v1_chr13_-_115078961_115078988	0.0604516	NKX3-2.p2	AK035175|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr9_+_66006025_66006053	0.0602456	NKX3-2.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr19_-_44624857_44624862	0.0601637	NKX3-2.p2	
mm9_v1_chr4_+_137772474_137772594	0.0599953	NKX3-2.p2	AK150784|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK166161|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_001122896|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_010470|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK004938|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK028181|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK050234|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK075725|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK043260|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK161041|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC020024|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC107687|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr16_+_5884885_5884885	0.0595899	NKX3-2.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr6_-_35489875_35489887	0.059479	NKX3-2.p2	NM_008098|Mtpn|14489|myotrophin
mm9_v1_chr2_+_165480795_165480797	0.058979	NKX3-2.p2	BC003755|Eya2|14049|eyes absent 2 homolog (Drosophila)	NM_010165|Eya2|14049|eyes absent 2 homolog (Drosophila)
mm9_v1_chr1_-_134603848_134603902	0.0589777	NKX3-2.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr17_-_26005680_26005704	0.0586164	NKX3-2.p2	AK020614|Fam195a|68241|family with sequence similarity 195, member A	AK003564|Fam195a|68241|family with sequence similarity 195, member A	NM_026633|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr19_+_8914035_8914053	0.057694	NKX3-2.p2	BC043023|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr1_+_75382155_75382196	0.0576248	NKX3-2.p2	AK147475|Speg|11790|SPEG complex locus	NM_001085370|Speg|11790|SPEG complex locus
mm9_v1_chr12_-_4484059_4484074	0.0574503	NKX3-2.p2	NM_010881|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr11_+_16951805_16951896	0.0572527	NKX3-2.p2	AK087090|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK148349|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK171947|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr16_+_38902431_38902466	0.057091	NKX3-2.p2	BC057555|Igsf11|207683|immunoglobulin superfamily, member 11	NM_170599|Igsf11|207683|immunoglobulin superfamily, member 11
mm9_v1_chr19_-_5729623_5729695	0.0569909	NKX3-2.p2	BC030163|Fam89b|17826|family with sequence similarity 89, member B	AK013256|Fam89b|17826|family with sequence similarity 89, member B	AF212921|Fam89b|17826|family with sequence similarity 89, member B	BC013894|Fam89b|17826|family with sequence similarity 89, member B	AF212920|Fam89b|17826|family with sequence similarity 89, member B	AB012726|Fam89b|17826|family with sequence similarity 89, member B	BC056166|Fam89b|17826|family with sequence similarity 89, member B	AK003883|Fam89b|17826|family with sequence similarity 89, member B	NM_023166|Fam89b|17826|family with sequence similarity 89, member B	NM_181452|Fam89b|17826|family with sequence similarity 89, member B
mm9_v1_chr18_+_61714881_61714968	0.0564088	NKX3-2.p2	AK146873|Csnk1a1|93687|casein kinase 1, alpha 1	AK167550|Csnk1a1|93687|casein kinase 1, alpha 1	AK076070|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chrX_-_133275812_133275890	0.0562702	NKX3-2.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr2_+_32143820_32143845	0.0562151	NKX3-2.p2	AK220509|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr8_+_26712705_26712790	0.0562111	NKX3-2.p2	AK170040|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	BC064447|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	NM_001001735|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	AK172238|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm9_v1_chr13_+_91062722_91062758	0.0560814	NKX3-2.p2	NM_024175|Rps23|66475|ribosomal protein S23	AK166994|Rps23|66475|ribosomal protein S23	AK010667|Rps23|66475|ribosomal protein S23
mm9_v1_chr8_+_123640069_123640092	0.0555032	NKX3-2.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr3_-_81779636_81779675	0.0550357	NKX3-2.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr8_+_113142480_113142625	0.0543493	NKX3-2.p2	AK084520|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171577|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK031952|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK043319|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK140191|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171883|Vac14|234729|Vac14 homolog (S. cerevisiae)	BC052199|Vac14|234729|Vac14 homolog (S. cerevisiae)	NM_146216|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK046826|Vac14|234729|Vac14 homolog (S. cerevisiae)
mm9_v1_chrX_+_98469429_98469601	0.0541846	NKX3-2.p2	BC090654|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)	NM_021521|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)
mm9_v1_chr1_-_75313567_75313600	0.0536718	NKX3-2.p2	AK052001|Dnpep|13437|aspartyl aminopeptidase	NM_016878|Dnpep|13437|aspartyl aminopeptidase
mm9_v1_chr14_-_56331924_56331924	0.0536688	NKX3-2.p2	BC026422|Tgm1|21816|transglutaminase 1, K polypeptide	NM_019984|Tgm1|21816|transglutaminase 1, K polypeptide
mm9_v1_chr17_-_26227104_26227112	0.0533659	NKX3-2.p2	AF155575|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal	NM_011933|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr8_+_125935470_125935482	0.0531245	NKX3-2.p2	AF312873|Tubb3|22152|tubulin, beta 3
mm9_v1_chrX_+_95345000_95345120	0.0531153	NKX3-2.p2	X59592|Ar|11835|androgen receptor	S56585|Ar|11835|androgen receptor	AK133647|Ar|11835|androgen receptor	NM_013476|Ar|11835|androgen receptor	X53779|Ar|11835|androgen receptor	X59411|Ar|11835|androgen receptor	M37890|Ar|11835|androgen receptor
mm9_v1_chr7_-_148042164_148042281	0.0530749	NKX3-2.p2	AK011508|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	BC019730|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK161239|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	NM_018742|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr8_-_35040236_35040273	0.0526076	NKX3-2.p2	AF148511|Rbpms|19663|RNA binding protein gene with multiple splicing	AK012265|Rbpms|19663|RNA binding protein gene with multiple splicing	AK012586|Rbpms|19663|RNA binding protein gene with multiple splicing
mm9_v1_chr10_-_79446784_79446797	0.0525026	NKX3-2.p2	AY096036|ORF61|216157|open reading frame 61	AY096037|ORF61|216157|open reading frame 61
mm9_v1_chr15_-_54670878_54670918	0.0524501	NKX3-2.p2	AK046689|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr19_+_46379216_46379289	0.052134	NKX3-2.p2	NM_001177369|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK144994|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK137680|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK148160|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK150012|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AF155372|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
mm9_v1_chr1_+_91040429_91040467	0.0520842	NKX3-2.p2	BC028911|Sh3bp4|98402|SH3-domain binding protein 4
mm9_v1_chr4_-_131394135_131394216	0.0519211	NKX3-2.p2	BC080736|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	BC048694|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK052720|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	D88187|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK148515|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_001083119|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_011214|Ptpru|19273|protein tyrosine phosphatase, receptor type, U
mm9_v1_chr7_+_48154647_48154658	0.0517185	NKX3-2.p2	AB030198|Vstm2b|58188|V-set and transmembrane domain containing 2B	NM_021387|Vstm2b|58188|V-set and transmembrane domain containing 2B	AK013845|Vstm2b|58188|V-set and transmembrane domain containing 2B
mm9_v1_chr15_-_83263181_83263279	0.0516239	NKX3-2.p2	AK191560|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK198672|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK198717|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK199099|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK199784|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK202155|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK170299|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AF128535|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK154785|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	NM_001159510|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	NM_011862|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2
mm9_v1_chr9_-_21043375_21043438	0.0513974	NKX3-2.p2	AK046178|Keap1|50868|kelch-like ECH-associated protein 1	AB020063|Keap1|50868|kelch-like ECH-associated protein 1	AK039549|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr18_-_36904173_36904177	0.0512505	NKX3-2.p2	AK018732|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2
mm9_v1_chr11_-_101163456_101163604	0.051122	NKX3-2.p2	AK189474|Becn1|56208|beclin 1, autophagy related	AK178460|Becn1|56208|beclin 1, autophagy related	AK151531|Becn1|56208|beclin 1, autophagy related	BC005770|Becn1|56208|beclin 1, autophagy related	BC027738|Becn1|56208|beclin 1, autophagy related	AK028851|Becn1|56208|beclin 1, autophagy related	AK083800|Becn1|56208|beclin 1, autophagy related	AK031501|Becn1|56208|beclin 1, autophagy related	AK032176|Becn1|56208|beclin 1, autophagy related	AK050329|Becn1|56208|beclin 1, autophagy related	NM_019584|Becn1|56208|beclin 1, autophagy related	AK077392|Becn1|56208|beclin 1, autophagy related
mm9_v1_chr2_-_48804794_48804803	0.0510425	NKX3-2.p2	AK145454|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr2_-_152158111_152158185	0.0509491	NKX3-2.p2	AK146176|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK088591|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK166075|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK085559|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	NM_001083921|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1
mm9_v1_chr3_+_134944239_134944255	0.0498398	NKX3-2.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr12_+_106801381_106801438	0.0498378	NKX3-2.p2	NM_009747|Bdkrb2|12062|bradykinin receptor, beta 2	X78438|Bdkrb2|12062|bradykinin receptor, beta 2	X69682|Bdkrb2|12062|bradykinin receptor, beta 2	AK132469|Bdkrb2|12062|bradykinin receptor, beta 2	BC137755|Bdkrb2|12062|bradykinin receptor, beta 2	BC137756|Bdkrb2|12062|bradykinin receptor, beta 2
mm9_v1_chr7_+_52419317_52419319	0.0497266	NKX3-2.p2	AK159064|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr11_+_78332692_78332747	0.0493302	NKX3-2.p2	
mm9_v1_chr8_-_48618741_48618847	0.0491655	NKX3-2.p2	BC147504|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene	BC151159|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene	AK083445|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene	AK085769|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene	AK160812|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene	NM_177240|D030016E14Rik|320714|RIKEN cDNA D030016E14 gene
mm9_v1_chr19_+_10463540_10463619	0.0486528	NKX3-2.p2	NM_018801|Syt7|54525|synaptotagmin VII	NM_173067|Syt7|54525|synaptotagmin VII	NM_173068|Syt7|54525|synaptotagmin VII	AK080850|Syt7|54525|synaptotagmin VII
mm9_v1_chr1_+_120285634_120285634	0.0484581	NKX3-2.p2	AK042402|Clasp1|76707|CLIP associating protein 1	NM_001081276|Clasp1|76707|CLIP associating protein 1	NM_029709|Clasp1|76707|CLIP associating protein 1	NM_177548|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr11_-_33893151_33893192	0.0484455	NKX3-2.p2	AK048178|Kcnip1|70357|Kv channel-interacting protein 1	AK081845|Kcnip1|70357|Kv channel-interacting protein 1	DQ148494|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190886|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr8_-_35040277_35040351	0.0484416	NKX3-2.p2	AK041118|Rbpms|19663|RNA binding protein gene with multiple splicing	AK079238|Rbpms|19663|RNA binding protein gene with multiple splicing	BC030397|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042674|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042675|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_019733|Rbpms|19663|RNA binding protein gene with multiple splicing
mm9_v1_chrX_+_53708015_53708070	0.0483642	NKX3-2.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr7_-_134164627_134164726	0.0483103	NKX3-2.p2	NM_001102563|Prrt2|69017|proline-rich transmembrane protein 2
mm9_v1_chr7_-_117129702_117129846	0.0479475	NKX3-2.p2	AK038953|Tmem41b|233724|transmembrane protein 41B	AK165226|Tmem41b|233724|transmembrane protein 41B	AK075726|Tmem41b|233724|transmembrane protein 41B	AK029327|Tmem41b|233724|transmembrane protein 41B	AK053588|Tmem41b|233724|transmembrane protein 41B	AK078357|Tmem41b|233724|transmembrane protein 41B	AK090100|Tmem41b|233724|transmembrane protein 41B	AK139961|Tmem41b|233724|transmembrane protein 41B	AK166427|Tmem41b|233724|transmembrane protein 41B	AK166455|Tmem41b|233724|transmembrane protein 41B	NM_153525|Tmem41b|233724|transmembrane protein 41B	BC027103|Tmem41b|233724|transmembrane protein 41B	AK172876|Tmem41b|233724|transmembrane protein 41B	BC026515|Tmem41b|233724|transmembrane protein 41B	AK033997|Tmem41b|233724|transmembrane protein 41B	AK035266|Tmem41b|233724|transmembrane protein 41B	AK162557|Tmem41b|233724|transmembrane protein 41B	AK150353|Tmem41b|233724|transmembrane protein 41B	AK153048|Tmem41b|233724|transmembrane protein 41B
mm9_v1_chr9_+_36640268_36640432	0.0476966	NKX3-2.p2	AK138656|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)	BC029629|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)
mm9_v1_chr13_+_90229271_90229367	0.0469578	NKX3-2.p2	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr1_+_63223396_63223420	0.0465204	NKX3-2.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr5_-_121459315_121459358	0.0464192	NKX3-2.p2	D29965|Rph3a|19894|rabphilin 3A	AB112924|Rph3a|19894|rabphilin 3A
mm9_v1_chr6_-_97409251_97409295	0.0463327	NKX3-2.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr14_+_55502261_55502285	0.0462948	NKX3-2.p2	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr7_+_25039812_25039838	0.0455489	NKX3-2.p2	AK032355|Zfp108|54678|zinc finger protein 108	NM_018791|Zfp108|54678|zinc finger protein 108	AF167315|Zfp108|54678|zinc finger protein 108
mm9_v1_chr7_+_80536124_80536202	0.0453492	NKX3-2.p2	AJ557513|Rgma|244058|RGM domain family, member A	AK145224|Rgma|244058|RGM domain family, member A	AK160661|Rgma|244058|RGM domain family, member A	AK141860|Rgma|244058|RGM domain family, member A
mm9_v1_chr2_+_120834141_120834181	0.0451606	NKX3-2.p2	NM_010761|Ccndbp1|17151|cyclin D-type binding-protein 1	AK144883|Ccndbp1|17151|cyclin D-type binding-protein 1	AK160205|Ccndbp1|17151|cyclin D-type binding-protein 1	AK167345|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr18_-_44821919_44821954	0.0447968	NKX3-2.p2	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr17_-_80689815_80689815	0.0445051	NKX3-2.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr2_-_27940370_27940408	0.0442343	NKX3-2.p2	AF063217|Fcnb|14134|ficolin B	BC107220|Fcnb|14134|ficolin B	BC107221|Fcnb|14134|ficolin B	NM_010190|Fcnb|14134|ficolin B	AK151676|Fcnb|14134|ficolin B
mm9_v1_chr4_+_132753616_132753740	0.044083	NKX3-2.p2	
mm9_v1_chr2_+_74560034_74560034	0.0440698	NKX3-2.p2	NM_010469|Hoxd4|15436|homeobox D4
mm9_v1_chr14_+_80400057_80400108	0.0434158	NKX3-2.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chr10_+_20760625_20760625	0.0432287	NKX3-2.p2	AK161335|Ahi1|52906|Abelson helper integration site 1	NM_001177776|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr17_+_6106857_6106857	0.043204	NKX3-2.p2	AK043826|Tulp4|68842|tubby like protein 4	AK084820|Tulp4|68842|tubby like protein 4
mm9_v1_chr2_+_122564227_122564360	0.0431862	NKX3-2.p2	AK147116|Pldn|18457|pallidin	NM_019788|Pldn|18457|pallidin	BC016554|Pldn|18457|pallidin	AK172571|Pldn|18457|pallidin	AK077720|Pldn|18457|pallidin	AK038381|Pldn|18457|pallidin	BC085260|Pldn|18457|pallidin	AK160580|Pldn|18457|pallidin	AK170964|Pldn|18457|pallidin
mm9_v1_chr19_+_4711220_4711230	0.043001	NKX3-2.p2	BC079860|Spnb3|20743|spectrin beta 3	NM_021287|Spnb3|20743|spectrin beta 3
mm9_v1_chr1_+_179375951_179375951	0.0425879	NKX3-2.p2	AF140224|Zfp238|30928|zinc finger protein 238	NM_013915|Zfp238|30928|zinc finger protein 238
mm9_v1_chr7_+_134388006_134388047	0.042564	NKX3-2.p2	AK090240|Zfp771|244216|zinc finger protein 771	NM_177362|Zfp771|244216|zinc finger protein 771	AK159461|Zfp771|244216|zinc finger protein 771
mm9_v1_chr15_-_66801093_66801186	0.0420468	NKX3-2.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr2_-_73224394_73224535	0.0410565	NKX3-2.p2	AK090081|Gpr155|68526|G protein-coupled receptor 155	BC115698|Gpr155|68526|G protein-coupled receptor 155	AK089436|Gpr155|68526|G protein-coupled receptor 155	HM161763|Gpr155|68526|G protein-coupled receptor 155	HM161764|Gpr155|68526|G protein-coupled receptor 155	HM161765|Gpr155|68526|G protein-coupled receptor 155	HM161766|Gpr155|68526|G protein-coupled receptor 155	NM_001080707|Gpr155|68526|G protein-coupled receptor 155	NM_001190297|Gpr155|68526|G protein-coupled receptor 155
mm9_v1_chr7_+_108534039_108534039	0.0408887	NKX3-2.p2	NM_027180|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr6_+_124999988_124999992	0.0407861	NKX3-2.p2	BC114591|Acrbp|54137|proacrosin binding protein	D17573|Acrbp|54137|proacrosin binding protein
mm9_v1_chr10_-_30562434_30562625	0.0406705	NKX3-2.p2	AK031506|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AB093589|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103575|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105651|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103576|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105652|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF173902|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF232240|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AK158000|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF172287|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AJ271867|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	NM_013904|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2
mm9_v1_chr9_+_110760470_110760484	0.0406089	NKX3-2.p2	AK045168|Prss50|235631|protease, serine, 50	NM_146227|Prss50|235631|protease, serine, 50	BC150686|Prss50|235631|protease, serine, 50	AF481144|Prss50|235631|protease, serine, 50
mm9_v1_chr6_+_88852321_88852415	0.0405733	NKX3-2.p2	BC057296|Tpra1|24100|transmembrane protein, adipocyte asscociated 1	BC028977|Tpra1|24100|transmembrane protein, adipocyte asscociated 1	AK089317|Tpra1|24100|transmembrane protein, adipocyte asscociated 1
mm9_v1_chr13_-_61141957_61141985	0.0405213	NKX3-2.p2	AY014776|Ctsq|104002|cathepsin Q	NM_029636|Ctsq|104002|cathepsin Q	BC099415|Ctsq|104002|cathepsin Q	AF456461|Ctsq|104002|cathepsin Q
mm9_v1_chr1_-_173152548_173152594	0.0399185	NKX3-2.p2	AK012264|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr10_-_61738537_61738571	0.0398924	NKX3-2.p2	U89409|Hk1|15275|hexokinase 1	AK218898|Hk1|15275|hexokinase 1
mm9_v1_chr12_+_17355232_17355314	0.0393689	NKX3-2.p2	AK160864|Nol10|217431|nucleolar protein 10	AK166160|Nol10|217431|nucleolar protein 10	AK164400|Nol10|217431|nucleolar protein 10	AK148210|Nol10|217431|nucleolar protein 10	BC086676|Nol10|217431|nucleolar protein 10	NM_001008421|Nol10|217431|nucleolar protein 10
mm9_v1_chr7_-_88092388_88092468	0.0392854	NKX3-2.p2	BC010484|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AK007449|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AB025405|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	NM_019951|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AK169560|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr2_+_69508174_69508176	0.0390185	NKX3-2.p2	AK132646|Kbtbd10|228003|kelch repeat and BTB (POZ) domain containing 10	NM_001081087|Kbtbd10|228003|kelch repeat and BTB (POZ) domain containing 10
mm9_v1_chr6_+_124999940_124999944	0.0387128	NKX3-2.p2	D17574|Acrbp|54137|proacrosin binding protein	NM_001127340|Acrbp|54137|proacrosin binding protein	NM_016845|Acrbp|54137|proacrosin binding protein
mm9_v1_chr2_-_156817751_156817861	0.0387064	NKX3-2.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr15_-_44584003_44584003	0.038407	NKX3-2.p2	AB232449|Sybu|319613|syntabulin (syntaxin-interacting)	BC065045|Sybu|319613|syntabulin (syntaxin-interacting)	NM_178765|Sybu|319613|syntabulin (syntaxin-interacting)
mm9_v1_chr7_+_109054350_109054514	0.0382121	NKX3-2.p2	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr12_+_45429857_45429887	0.0380055	NKX3-2.p2	AK043838|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_001146031|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_176930|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr16_-_28929698_28929810	0.0377149	NKX3-2.p2	BC085092|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	BC068245|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	NM_177718|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene
mm9_v1_chr11_+_100870759_100870810	0.0372941	NKX3-2.p2	NM_016920|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK029316|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AF218249|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK036530|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK158786|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC066839|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC071182|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC001995|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1
mm9_v1_chr15_+_78757171_78757220	0.0369283	NKX3-2.p2	BC002063|Lgals1|16852|lectin, galactose binding, soluble 1	X51903|Lgals1|16852|lectin, galactose binding, soluble 1	X15986|Lgals1|16852|lectin, galactose binding, soluble 1	X53067|Lgals1|16852|lectin, galactose binding, soluble 1	BC099479|Lgals1|16852|lectin, galactose binding, soluble 1	M57470|Lgals1|16852|lectin, galactose binding, soluble 1	M33214|Lgals1|16852|lectin, galactose binding, soluble 1
mm9_v1_chr14_+_32955207_32955211	0.036879	NKX3-2.p2	NM_020597|Msmb|17695|beta-microseminoprotein
mm9_v1_chr11_-_31571811_31571918	0.0366354	NKX3-2.p2	NM_001024919|Bod1|69556|biorientation of chromosomes in cell division 1	BC116435|Bod1|69556|biorientation of chromosomes in cell division 1	BC116436|Bod1|69556|biorientation of chromosomes in cell division 1	BC128508|Bod1|69556|biorientation of chromosomes in cell division 1	BC128509|Bod1|69556|biorientation of chromosomes in cell division 1
mm9_v1_chr5_-_8367951_8368174	0.0363521	NKX3-2.p2	BC117707|Adam22|11496|a disintegrin and metallopeptidase domain 22	BC117708|Adam22|11496|a disintegrin and metallopeptidase domain 22	HM004095|Adam22|11496|a disintegrin and metallopeptidase domain 22	AB009674|Adam22|11496|a disintegrin and metallopeptidase domain 22	AK082335|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001007220|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001007221|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001098225|Adam22|11496|a disintegrin and metallopeptidase domain 22	AK042962|Adam22|11496|a disintegrin and metallopeptidase domain 22
mm9_v1_chr2_-_130249983_130250049	0.0363456	NKX3-2.p2	AK081584|Fam113a|319513|family with sequence similarity 113, member A	AK032762|Fam113a|319513|family with sequence similarity 113, member A	AK045248|Fam113a|319513|family with sequence similarity 113, member A	AK044590|Fam113a|319513|family with sequence similarity 113, member A	AK027964|Fam113a|319513|family with sequence similarity 113, member A	AK032354|Fam113a|319513|family with sequence similarity 113, member A	AK077745|Fam113a|319513|family with sequence similarity 113, member A	AK161998|Fam113a|319513|family with sequence similarity 113, member A	AK041939|Fam113a|319513|family with sequence similarity 113, member A	AK085613|Fam113a|319513|family with sequence similarity 113, member A	NM_178762|Fam113a|319513|family with sequence similarity 113, member A	AK079521|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr18_-_36675393_36675437	0.0363267	NKX3-2.p2	L07264|Hbegf|15200|heparin-binding EGF-like growth factor	AK145548|Hbegf|15200|heparin-binding EGF-like growth factor	AK160575|Hbegf|15200|heparin-binding EGF-like growth factor	BC089607|Hbegf|15200|heparin-binding EGF-like growth factor	AK052084|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr17_-_26122588_26122676	0.0360356	NKX3-2.p2	AK079422|Solh|50817|small optic lobes homolog (Drosophila)	AK170543|Solh|50817|small optic lobes homolog (Drosophila)	BC058094|Solh|50817|small optic lobes homolog (Drosophila)
mm9_v1_chr7_+_134614507_134614614	0.0357287	NKX3-2.p2	AK151203|Prr14|233895|proline rich 14	AK145816|Prr14|233895|proline rich 14	AK139559|Prr14|233895|proline rich 14
mm9_v1_chr11_+_58246060_58246060	0.0355672	NKX3-2.p2	NM_001045542|Gm12253|624860|predicted gene 12253
mm9_v1_chr11_+_80022573_80022582	0.0354578	NKX3-2.p2	BC046785|Rhot1|59040|ras homolog gene family, member T1	AK147749|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr5_-_134790544_134790615	0.0353406	NKX3-2.p2	AF017085|Gtf2i|14886|general transcription factor II I	AY030290|Gtf2i|14886|general transcription factor II I	AY030291|Gtf2i|14886|general transcription factor II I	AY030292|Gtf2i|14886|general transcription factor II I	AY030293|Gtf2i|14886|general transcription factor II I	AK147201|Gtf2i|14886|general transcription factor II I	BC053044|Gtf2i|14886|general transcription factor II I	NM_001080746|Gtf2i|14886|general transcription factor II I	NM_001080747|Gtf2i|14886|general transcription factor II I	NM_001080748|Gtf2i|14886|general transcription factor II I	NM_001080749|Gtf2i|14886|general transcription factor II I	NM_010365|Gtf2i|14886|general transcription factor II I
mm9_v1_chr4_-_133684599_133684716	0.035166	NKX3-2.p2	AK003431|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	BC008110|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	NM_080559|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr6_-_85865600_85865670	0.0349786	NKX3-2.p2	BC010796|Cml1|66116|camello-like 1	AK003301|Cml1|66116|camello-like 1	AF163314|Cml1|66116|camello-like 1	NM_023160|Cml1|66116|camello-like 1
mm9_v1_chr10_+_80065598_80065660	0.0348209	NKX3-2.p2	AK019112|Scamp4|56214|secretory carrier membrane protein 4	NM_001100606|Adat3|100113398|adenosine deaminase, tRNA-specific 3, TAD2 homolog (S. cerevisiae)	NM_019575|Scamp4|56214|secretory carrier membrane protein 4	AK078226|Scamp4|56214|secretory carrier membrane protein 4	AK154094|Scamp4|56214|secretory carrier membrane protein 4	AK160755|Scamp4|56214|secretory carrier membrane protein 4	AK168554|Scamp4|56214|secretory carrier membrane protein 4	BC054104|Scamp4|56214|secretory carrier membrane protein 4	BC018215|Scamp4|56214|secretory carrier membrane protein 4	AF224721|Scamp4|56214|secretory carrier membrane protein 4
mm9_v1_chr18_+_61714969_61714972	0.034559	NKX3-2.p2	AK152793|Csnk1a1|93687|casein kinase 1, alpha 1	AK166318|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr11_-_96685326_96685440	0.0344164	NKX3-2.p2	AK148471|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130453|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130454|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130451|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130452|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr7_-_23628623_23628623	0.0343415	NKX3-2.p2	NM_001166758|Vmn1r159|670857|vomeronasal 1 receptor 159
mm9_v1_chr13_+_94074449_94074449	0.0342618	NKX3-2.p2	AF093257|Homer1|26556|homer homolog 1 (Drosophila)	NM_011982|Homer1|26556|homer homolog 1 (Drosophila)	NM_147176|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr2_+_181572558_181572632	0.0338105	NKX3-2.p2	AK031335|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	BC040385|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	NM_153594|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK146080|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AB182640|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK088800|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
mm9_v1_chr17_+_70871393_70871416	0.0338016	NKX3-2.p2	AK036307|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr15_+_102038697_102038697	0.0337781	NKX3-2.p2	BC030410|Zfp740|68744|zinc finger protein 740	NM_153194|Zfp740|68744|zinc finger protein 740
mm9_v1_chr14_-_20796199_20796254	0.0337093	NKX3-2.p2	AK075698|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK160396|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK012405|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr4_+_126430787_126430838	0.0336514	NKX3-2.p2	AK049570|AU040320|100317|expressed sequence AU040320	NM_001035525|AU040320|100317|expressed sequence AU040320	AK084668|AU040320|100317|expressed sequence AU040320	AK172674|AU040320|100317|expressed sequence AU040320
mm9_v1_chr5_-_101083995_101084232	0.0335997	NKX3-2.p2	AK213124|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK209340|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK211081|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK213346|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr15_+_100446514_100446564	0.0331888	NKX3-2.p2	AK151730|Dazap2|23994|DAZ associated protein 2	AK152511|Dazap2|23994|DAZ associated protein 2
mm9_v1_chr15_+_83610434_83610456	0.0329086	NKX3-2.p2	AK048421|Mpped1|223726|metallophosphoesterase domain containing 1	NM_172610|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr7_+_128219633_128219975	0.0328001	NKX3-2.p2	AK003378|Mettl9|59052|methyltransferase like 9	AK194757|Mettl9|59052|methyltransferase like 9	AK206305|Mettl9|59052|methyltransferase like 9	AK208785|Mettl9|59052|methyltransferase like 9	AK209460|Mettl9|59052|methyltransferase like 9	AK211016|Mettl9|59052|methyltransferase like 9	AK212761|Mettl9|59052|methyltransferase like 9	AK216310|Mettl9|59052|methyltransferase like 9	AK218040|Mettl9|59052|methyltransferase like 9	AK196516|Mettl9|59052|methyltransferase like 9	AK199334|Mettl9|59052|methyltransferase like 9	AK212785|Mettl9|59052|methyltransferase like 9
mm9_v1_chr11_-_94361203_94361265	0.032514	NKX3-2.p2	BC016454|Epn3|71889|epsin 3	AK158031|Epn3|71889|epsin 3
mm9_v1_chr7_-_19856882_19857074	0.0323983	NKX3-2.p2	BC010223|Vasp|22323|vasodilator-stimulated phosphoprotein
mm9_v1_chr15_+_74346835_74346839	0.0319395	NKX3-2.p2	AK147494|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr7_+_19609771_19609790	0.0317217	NKX3-2.p2	AK155375|Sympk|68188|symplekin	AK172040|Sympk|68188|symplekin	BC049852|Sympk|68188|symplekin
mm9_v1_chr7_+_57230683_57230719	0.0312512	NKX3-2.p2	AY622226|Nell1|338352|NEL-like 1 (chicken)	NM_001037906|Nell1|338352|NEL-like 1 (chicken)
mm9_v1_chr2_+_132673469_132673469	0.0311297	NKX3-2.p2	AK016165|Crls1|66586|cardiolipin synthase 1	NM_025646|Crls1|66586|cardiolipin synthase 1
mm9_v1_chr1_+_180117547_180117811	0.0310648	NKX3-2.p2	AK029574|Pppde1|78825|PPPDE peptidase domain containing 1	NM_024282|Pppde1|78825|PPPDE peptidase domain containing 1	AK020014|Pppde1|78825|PPPDE peptidase domain containing 1	AK049579|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr19_+_55969810_55969810	0.0308127	NKX3-2.p2	NM_001142924|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chrX_+_100551808_100551914	0.0308112	NKX3-2.p2	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr8_-_91568060_91568092	0.030783	NKX3-2.p2	BC062937|Sall1|58198|sal-like 1 (Drosophila)	NM_021390|Sall1|58198|sal-like 1 (Drosophila)
mm9_v1_chr12_-_71448600_71448600	0.0301768	NKX3-2.p2	BC052034|Trim9|94090|tripartite motif-containing 9	NM_001110202|Trim9|94090|tripartite motif-containing 9	NM_001110203|Trim9|94090|tripartite motif-containing 9	NM_053167|Trim9|94090|tripartite motif-containing 9
mm9_v1_chr11_-_100632238_100632274	0.030134	NKX3-2.p2	AK143922|Ghdc|80860|GH3 domain containing	BC005639|Ghdc|80860|GH3 domain containing	AK135322|Ghdc|80860|GH3 domain containing	AF316996|Ghdc|80860|GH3 domain containing	NM_031871|Ghdc|80860|GH3 domain containing
mm9_v1_chr3_+_128916849_128916891	0.0300391	NKX3-2.p2	AK034846|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042502|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048724|Pitx2|18741|paired-like homeodomain transcription factor 2	AJ243597|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr6_-_41396095_41396143	0.0298103	NKX3-2.p2	NM_001103153|Gm10334|100040233|predicted gene 10334	BC141304|Prss3|22073|protease, serine, 3
mm9_v1_chr11_+_102294276_102294332	0.0297506	NKX3-2.p2	BC037047|Grn|14824|granulin	X62321|Grn|14824|granulin	AK196399|Grn|14824|granulin	AK205747|Grn|14824|granulin
mm9_v1_chr9_-_45714487_45714524	0.02945	NKX3-2.p2	AK032376|Rnf214|235315|ring finger protein 214
mm9_v1_chr18_-_81130721_81130824	0.0294276	NKX3-2.p2	BC057000|Atp9b|50771|ATPase, class II, type 9B	BC079626|Atp9b|50771|ATPase, class II, type 9B	AK044331|Atp9b|50771|ATPase, class II, type 9B	AK166562|Atp9b|50771|ATPase, class II, type 9B	NM_015805|Atp9b|50771|ATPase, class II, type 9B
mm9_v1_chr11_+_84693721_84693889	0.0294253	NKX3-2.p2	BC060115|Myo19|66196|myosin XIX	NM_025414|Myo19|66196|myosin XIX	AK080117|Myo19|66196|myosin XIX	AK053237|Myo19|66196|myosin XIX	AK053033|Myo19|66196|myosin XIX
mm9_v1_chr15_-_36936955_36937018	0.0292527	NKX3-2.p2	AK004076|Zfp706|68036|zinc finger protein 706	BC147306|Zfp706|68036|zinc finger protein 706	BC147307|Zfp706|68036|zinc finger protein 706
mm9_v1_chr10_+_85763287_85763288	0.0291879	NKX3-2.p2	L27424|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr12_-_99497498_99497616	0.0290924	NKX3-2.p2	AK077475|Galc|14420|galactosylceramidase	BC065140|Galc|14420|galactosylceramidase	BC086671|Galc|14420|galactosylceramidase	NM_008079|Galc|14420|galactosylceramidase	AK165478|Galc|14420|galactosylceramidase	D38557|Galc|14420|galactosylceramidase
mm9_v1_chr9_+_105297721_105297851	0.0288562	NKX3-2.p2	BC058377|Aste1|66595|asteroid homolog 1 (Drosophila)	NM_025651|Aste1|66595|asteroid homolog 1 (Drosophila)	BC098471|Aste1|66595|asteroid homolog 1 (Drosophila)	AK030661|Aste1|66595|asteroid homolog 1 (Drosophila)
mm9_v1_chr14_+_41945059_41945084	0.0286737	NKX3-2.p2	AK011333|Sftpa1|20387|surfactant associated protein A1	AK004620|Sftpa1|20387|surfactant associated protein A1	AK004788|Sftpa1|20387|surfactant associated protein A1	AK075702|Sftpa1|20387|surfactant associated protein A1	BC061096|Sftpa1|20387|surfactant associated protein A1	NM_023134|Sftpa1|20387|surfactant associated protein A1
mm9_v1_chr15_+_76527134_76527193	0.0286252	NKX3-2.p2	AK004932|Gpt|76282|glutamic pyruvic transaminase, soluble	AK008086|Gpt|76282|glutamic pyruvic transaminase, soluble	AK009457|Gpt|76282|glutamic pyruvic transaminase, soluble	BC026846|Gpt|76282|glutamic pyruvic transaminase, soluble	BC022625|Gpt|76282|glutamic pyruvic transaminase, soluble	NM_182805|Gpt|76282|glutamic pyruvic transaminase, soluble
mm9_v1_chrX_+_33868347_33868594	0.0282573	NKX3-2.p2	AK167341|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK016522|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK147751|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	NM_028894|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120688|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120690|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK030866|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3
mm9_v1_chr7_-_22331108_22331108	0.0280773	NKX3-2.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr17_+_8994520_8994643	0.0277136	NKX3-2.p2	AK014090|Pde10a|23984|phosphodiesterase 10A	AY360383|Pde10a|23984|phosphodiesterase 10A	NM_011866|Pde10a|23984|phosphodiesterase 10A	AK147690|Pde10a|23984|phosphodiesterase 10A
mm9_v1_chr11_+_105829364_105829480	0.0276954	NKX3-2.p2	BC083109|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr8_-_71259021_71259065	0.0276915	NKX3-2.p2	BC089162|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1	NM_172753|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm9_v1_chr5_-_109224353_109224381	0.0276363	NKX3-2.p2	BC132664|Tmed11|67366|transmembrane emp24 protein transport domain containing	BC132666|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK019032|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK007381|Tmed11|67366|transmembrane emp24 protein transport domain containing	NM_026109|Tmed11|67366|transmembrane emp24 protein transport domain containing
mm9_v1_chr5_-_122907269_122907331	0.0275572	NKX3-2.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_+_23224804_23224864	0.027418	NKX3-2.p2	BC092222|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	NM_145933|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr6_-_88468710_88468869	0.0270011	NKX3-2.p2	AF145253|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AF222743|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AK167484|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	BC003707|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AK159349|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AK153055|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AK088473|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	NM_016906|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)	AB032902|Sec61a1|53421|Sec61 alpha 1 subunit (S. cerevisiae)
mm9_v1_chr16_+_18877336_18877523	0.0268477	NKX3-2.p2	X92590|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X75295|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X99712|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr2_+_120802698_120802797	0.0267952	NKX3-2.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr15_+_74346624_74346672	0.0266276	NKX3-2.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr4_+_128735446_128735514	0.0265751	NKX3-2.p2	NM_029219|Rnf19b|75234|ring finger protein 19B
mm9_v1_chr7_-_6107491_6107598	0.0263491	NKX3-2.p2	BC137753|Zfp787|67109|zinc finger protein 787	AK018745|Zfp787|67109|zinc finger protein 787	AK008750|Zfp787|67109|zinc finger protein 787	AK077458|Zfp787|67109|zinc finger protein 787	BC038658|Zfp787|67109|zinc finger protein 787	NM_001013012|Zfp787|67109|zinc finger protein 787	AK006810|Zfp787|67109|zinc finger protein 787
mm9_v1_chr2_+_34729973_34730037	0.0258818	NKX3-2.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr7_-_52271450_52271636	0.0255101	NKX3-2.p2	BC042576|Scaf1|233208|SR-related CTD-associated factor 1	AK141920|Scaf1|233208|SR-related CTD-associated factor 1	BC085153|Scaf1|233208|SR-related CTD-associated factor 1	NM_001008422|Scaf1|233208|SR-related CTD-associated factor 1	BC079873|Scaf1|233208|SR-related CTD-associated factor 1
mm9_v1_chr17_-_49703661_49703689	0.0254521	NKX3-2.p2	BC050043|Daam2|76441|dishevelled associated activator of morphogenesis 2	NM_001008231|Daam2|76441|dishevelled associated activator of morphogenesis 2	AY426536|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chr12_+_89192945_89192962	0.0251178	NKX3-2.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK139641|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chr3_-_36512237_36512327	0.0251153	NKX3-2.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr2_+_162813260_162813281	0.0249877	NKX3-2.p2	AK136559|Sgk2|27219|serum/glucocorticoid regulated kinase 2	AF169033|Sgk2|27219|serum/glucocorticoid regulated kinase 2
mm9_v1_chr11_+_77499668_77499674	0.0249372	NKX3-2.p2	AK142954|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK152336|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK132603|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr9_+_108756367_108756465	0.0248531	NKX3-2.p2	AK080750|Slc26a6|171429|solute carrier family 26, member 6	AK163670|Slc26a6|171429|solute carrier family 26, member 6	AK163671|Slc26a6|171429|solute carrier family 26, member 6	NM_134420|Slc26a6|171429|solute carrier family 26, member 6	AK029238|Slc26a6|171429|solute carrier family 26, member 6	AK046993|Slc26a6|171429|solute carrier family 26, member 6	AK053088|Slc26a6|171429|solute carrier family 26, member 6	AY049076|Slc26a6|171429|solute carrier family 26, member 6
mm9_v1_chr9_+_46048812_46048926	0.0247956	NKX3-2.p2	NM_007468|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr2_+_163843294_163843512	0.0247084	NKX3-2.p2	AK206846|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK207996|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK212148|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK214843|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK215126|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK219468|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr7_-_123182257_123182257	0.0246754	NKX3-2.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr8_+_95484831_95484945	0.0246423	NKX3-2.p2	AY525777|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	AY525778|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	NM_009209|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm9_v1_chr16_-_20426357_20426468	0.0245182	NKX3-2.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr18_+_37152024_37152120	0.0244819	NKX3-2.p2	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr14_-_56290697_56290758	0.0243868	NKX3-2.p2	D10918|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK147080|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	BC004625|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK146732|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	NM_008683|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8
mm9_v1_chr9_+_66006060_66006077	0.0243286	NKX3-2.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr19_+_4097894_4098000	0.0242957	NKX3-2.p2	AK183323|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr11_+_44332426_44332513	0.0240507	NKX3-2.p2	AK014408|Rnf145|74315|ring finger protein 145	NM_028862|Rnf145|74315|ring finger protein 145	AK043002|Rnf145|74315|ring finger protein 145
mm9_v1_chr17_+_13109289_13109379	0.0240456	NKX3-2.p2	AK151445|Tcp1|21454|t-complex protein 1	AK153430|Tcp1|21454|t-complex protein 1	AK166966|Tcp1|21454|t-complex protein 1	AK150666|Tcp1|21454|t-complex protein 1	AK150744|Tcp1|21454|t-complex protein 1	AK151903|Tcp1|21454|t-complex protein 1	AK152633|Tcp1|21454|t-complex protein 1	AK149611|Tcp1|21454|t-complex protein 1	AK151068|Tcp1|21454|t-complex protein 1	AK165665|Tcp1|21454|t-complex protein 1	NM_013686|Tcp1|21454|t-complex protein 1	AK149755|Tcp1|21454|t-complex protein 1	AK152759|Tcp1|21454|t-complex protein 1	AK153037|Tcp1|21454|t-complex protein 1	AK166828|Tcp1|21454|t-complex protein 1	AK167529|Tcp1|21454|t-complex protein 1	AK152641|Tcp1|21454|t-complex protein 1	BC003809|Tcp1|21454|t-complex protein 1	M12899|Tcp1|21454|t-complex protein 1	D90344|Tcp1|21454|t-complex protein 1
mm9_v1_chr6_-_35083605_35083717	0.0240029	NKX3-2.p2	AK028190|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC048243|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC058778|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK144760|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK029753|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	U71269|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK009234|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK032248|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr7_-_152469796_152469915	0.02393	NKX3-2.p2	AK089490|Tpcn2|233979|two pore segment channel 2	AK170863|Tpcn2|233979|two pore segment channel 2	AK052930|Tpcn2|233979|two pore segment channel 2	NM_146206|Tpcn2|233979|two pore segment channel 2	AK090059|Tpcn2|233979|two pore segment channel 2	AK040854|Tpcn2|233979|two pore segment channel 2	BC141195|Tpcn2|233979|two pore segment channel 2
mm9_v1_chr7_-_74517624_74517743	0.0238439	NKX3-2.p2	AK132678|Mef2a|17258|myocyte enhancer factor 2A	BC019116|Mef2a|17258|myocyte enhancer factor 2A	BC096598|Mef2a|17258|myocyte enhancer factor 2A	BC061128|Mef2a|17258|myocyte enhancer factor 2A	AK052385|Mef2a|17258|myocyte enhancer factor 2A	AK153751|Mef2a|17258|myocyte enhancer factor 2A	NM_001033713|Mef2a|17258|myocyte enhancer factor 2A
mm9_v1_chr3_-_32635636_32635679	0.0236086	NKX3-2.p2	BC038065|Mrpl47|74600|mitochondrial ribosomal protein L47	BC029173|Mrpl47|74600|mitochondrial ribosomal protein L47	BC087953|Mrpl47|74600|mitochondrial ribosomal protein L47	NM_029017|Mrpl47|74600|mitochondrial ribosomal protein L47
mm9_v1_chr7_-_148040227_148040484	0.023477	NKX3-2.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr18_+_11997728_11997798	0.023424	NKX3-2.p2	AK156273|Cables1|63955|CDK5 and Abl enzyme substrate 1	AF133208|Cables1|63955|CDK5 and Abl enzyme substrate 1	NM_001146287|Cables1|63955|CDK5 and Abl enzyme substrate 1	NM_022021|Cables1|63955|CDK5 and Abl enzyme substrate 1	BC145142|Cables1|63955|CDK5 and Abl enzyme substrate 1	BC150714|Cables1|63955|CDK5 and Abl enzyme substrate 1
mm9_v1_chr6_-_85463535_85463588	0.0230358	NKX3-2.p2	NM_020596|Egr4|13656|early growth response 4	AK141637|Egr4|13656|early growth response 4
mm9_v1_chr11_-_101969089_101969147	0.0229905	NKX3-2.p2	BC010821|Pyy|217212|peptide YY	NM_145435|Pyy|217212|peptide YY	AK050518|Pyy|217212|peptide YY
mm9_v1_chr19_-_7457485_7457515	0.0229056	NKX3-2.p2	NM_001033139|AI846148|68229|expressed sequence AI846148	NM_001167831|AI846148|68229|expressed sequence AI846148
mm9_v1_chr7_+_105987354_105987515	0.0226775	NKX3-2.p2	NM_009519|Wnt11|22411|wingless-related MMTV integration site 11	X70800|Wnt11|22411|wingless-related MMTV integration site 11	BC125482|Wnt11|22411|wingless-related MMTV integration site 11	BC125484|Wnt11|22411|wingless-related MMTV integration site 11	BC144947|Wnt11|22411|wingless-related MMTV integration site 11	AK031573|Wnt11|22411|wingless-related MMTV integration site 11
mm9_v1_chr6_+_120043367_120043412	0.0221109	NKX3-2.p2	AF205634|Ninj2|29862|ninjurin 2	NM_016718|Ninj2|29862|ninjurin 2	AK138486|Ninj2|29862|ninjurin 2	AK163748|Ninj2|29862|ninjurin 2	BC116206|Ninj2|29862|ninjurin 2
mm9_v1_chr6_-_35083720_35083747	0.0220262	NKX3-2.p2	AK165997|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK075887|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164411|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164412|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164413|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164414|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_016877|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr13_-_55932612_55932616	0.0217081	NKX3-2.p2	AK142455|Pitx1|18740|paired-like homeodomain transcription factor 1
mm9_v1_chr7_+_19609725_19609766	0.0214724	NKX3-2.p2	AK155093|Sympk|68188|symplekin	NM_026605|Sympk|68188|symplekin	AK146894|Sympk|68188|symplekin	AK168541|Sympk|68188|symplekin	AK168757|Sympk|68188|symplekin	AK165591|Sympk|68188|symplekin
mm9_v1_chr7_-_112748585_112748623	0.0211017	NKX3-2.p2	U89889|Hpx|15458|hemopexin	BC011246|Hpx|15458|hemopexin	BC019901|Hpx|15458|hemopexin
mm9_v1_chr4_-_110024513_110024515	0.0209212	NKX3-2.p2	AF041341|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163397|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr15_+_101904294_101904371	0.0206271	NKX3-2.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr3_-_94590356_94590436	0.0204299	NKX3-2.p2	BC052941|Cgn|70737|cingulin	AK018143|Cgn|70737|cingulin	BC108378|Cgn|70737|cingulin	BC042459|Cgn|70737|cingulin	BC064474|Cgn|70737|cingulin	BC087546|Cgn|70737|cingulin	AK173148|Cgn|70737|cingulin	NM_001037711|Cgn|70737|cingulin
mm9_v1_chr8_+_97190597_97190763	0.0202456	NKX3-2.p2	BC002131|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	NM_024191|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK149620|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK161325|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK018229|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	CT010168|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr10_+_61155793_61155924	0.0201788	NKX3-2.p2	
mm9_v1_chr1_-_36615225_36615265	0.0195922	NKX3-2.p2	NM_001126047|Sema4c|20353|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm9_v1_chr6_+_94450307_94450362	0.0195364	NKX3-2.p2	NM_026255|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015299|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015954|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC037142|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC019156|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC049899|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm9_v1_chr5_+_34678976_34679138	0.0193331	NKX3-2.p2	AK133924|Rnf4|19822|ring finger protein 4	AK159949|Rnf4|19822|ring finger protein 4	AK090162|Rnf4|19822|ring finger protein 4	NM_011278|Rnf4|19822|ring finger protein 4	AK147057|Rnf4|19822|ring finger protein 4	AK158987|Rnf4|19822|ring finger protein 4	AK019171|Rnf4|19822|ring finger protein 4	AK159296|Rnf4|19822|ring finger protein 4	AK151116|Rnf4|19822|ring finger protein 4	AK159778|Rnf4|19822|ring finger protein 4	AF169300|Rnf4|19822|ring finger protein 4	BC003282|Rnf4|19822|ring finger protein 4	AK145596|Rnf4|19822|ring finger protein 4	AK179891|Rnf4|19822|ring finger protein 4	AK207872|Rnf4|19822|ring finger protein 4	AK219295|Rnf4|19822|ring finger protein 4
mm9_v1_chr11_-_98590680_98590748	0.0191532	NKX3-2.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr17_+_17201047_17201078	0.0187938	NKX3-2.p2	L20450|Zfp97|22759|zinc finger protein 97	BC064743|Zfp960|449000|zinc finger protein 960	BC066177|Zfp960|449000|zinc finger protein 960	NM_001005358|Zfp960|449000|zinc finger protein 960	NM_001163919|Zfp960|449000|zinc finger protein 960	BC018101|Zfp960|449000|zinc finger protein 960	AK145357|Zfp960|449000|zinc finger protein 960
mm9_v1_chr4_+_95224197_95224229	0.018515	NKX3-2.p2	NM_001113412|Fggy|75578|FGGY carbohydrate kinase domain containing	AK138439|Fggy|75578|FGGY carbohydrate kinase domain containing	AK082737|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chr11_-_50051972_50051973	0.0180274	NKX3-2.p2	BC028760|Ltc4s|17001|leukotriene C4 synthase	NM_008521|Ltc4s|17001|leukotriene C4 synthase	U27195|Ltc4s|17001|leukotriene C4 synthase
mm9_v1_chr7_-_146374363_146374372	0.018	NKX3-2.p2	BC026457|Stk32c|57740|serine/threonine kinase 32C	AK046439|Stk32c|57740|serine/threonine kinase 32C	AB041542|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr3_+_94914936_94915064	0.0178815	NKX3-2.p2	BC043029|Vps72|21427|vacuolar protein sorting 72 (yeast)	NM_009336|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK140284|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK155191|Vps72|21427|vacuolar protein sorting 72 (yeast)	BC004834|Vps72|21427|vacuolar protein sorting 72 (yeast)	D43643|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK179387|Vps72|21427|vacuolar protein sorting 72 (yeast)
mm9_v1_chr16_+_22857885_22858041	0.0173749	NKX3-2.p2	NM_001190804|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	NM_001190805|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	NM_026400|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK075785|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK148511|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK010861|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK075953|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK050500|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK166730|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK144516|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC003999|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC040747|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC018282|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AY054981|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11
mm9_v1_chr9_-_75246118_75246213	0.0171233	NKX3-2.p2	BC048779|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr16_-_45158709_45158787	0.016897	NKX3-2.p2	AK030566|Slc35a5|74102|solute carrier family 35, member A5	AK003124|Slc35a5|74102|solute carrier family 35, member A5	AK052833|Slc35a5|74102|solute carrier family 35, member A5	BC011115|Slc35a5|74102|solute carrier family 35, member A5	AK085567|Slc35a5|74102|solute carrier family 35, member A5	AK033921|Slc35a5|74102|solute carrier family 35, member A5	AK170026|Slc35a5|74102|solute carrier family 35, member A5	AK034527|Slc35a5|74102|solute carrier family 35, member A5	AK150825|Slc35a5|74102|solute carrier family 35, member A5	AK151484|Slc35a5|74102|solute carrier family 35, member A5	NM_028756|Slc35a5|74102|solute carrier family 35, member A5
mm9_v1_chrX_+_20374922_20374939	0.0167159	NKX3-2.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr9_-_99610481_99610525	0.016699	NKX3-2.p2	NM_001194922|Cldn18|56492|claudin 18	NM_019815|Cldn18|56492|claudin 18
mm9_v1_chr17_-_10512094_10512209	0.0166914	NKX3-2.p2	BC053426|Qk|19317|quaking
mm9_v1_chr4_-_122563074_122563173	0.016652	NKX3-2.p2	AK169652|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK144094|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK165565|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK171388|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK162629|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK137222|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK128889|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	L12367|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK158150|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK170901|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK156556|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	AK053351|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)	NM_007598|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)
mm9_v1_chr7_+_4744521_4744617	0.016596	NKX3-2.p2	X74856|Rpl28|19943|ribosomal protein L28	BC086932|Rpl28|19943|ribosomal protein L28	AK012368|Rpl28|19943|ribosomal protein L28	AK018714|Rpl28|19943|ribosomal protein L28	AK076133|Rpl28|19943|ribosomal protein L28	BC092012|Rpl28|19943|ribosomal protein L28	NM_009081|Rpl28|19943|ribosomal protein L28	BC024395|Rpl28|19943|ribosomal protein L28	BC086797|Rpl28|19943|ribosomal protein L28
mm9_v1_chr14_-_67627598_67627723	0.0165759	NKX3-2.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr9_-_21043659_21043781	0.0165101	NKX3-2.p2	AK150437|Keap1|50868|kelch-like ECH-associated protein 1	AK152142|Keap1|50868|kelch-like ECH-associated protein 1	AK004738|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110305|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110306|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110307|Keap1|50868|kelch-like ECH-associated protein 1	NM_016679|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr16_+_91225794_91225820	0.0164561	NKX3-2.p2	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr9_+_45714587_45714651	0.0163622	NKX3-2.p2	AK050638|Rnf214|235315|ring finger protein 214	BC056456|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	NM_008794|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr4_+_147932513_147932557	0.0163017	NKX3-2.p2	NM_016699|Exosc10|50912|exosome component 10	AK081014|Exosc10|50912|exosome component 10	AK166070|Exosc10|50912|exosome component 10	AK144162|Exosc10|50912|exosome component 10	BC027326|Exosc10|50912|exosome component 10
mm9_v1_chr4_+_126431013_126431096	0.0162599	NKX3-2.p2	NM_001035526|AU040320|100317|expressed sequence AU040320	NM_133886|AU040320|100317|expressed sequence AU040320	BC028869|AU040320|100317|expressed sequence AU040320	AK163033|AU040320|100317|expressed sequence AU040320	AK170261|AU040320|100317|expressed sequence AU040320	AK043006|AU040320|100317|expressed sequence AU040320	AK007704|AU040320|100317|expressed sequence AU040320	AK031342|AU040320|100317|expressed sequence AU040320
mm9_v1_chr18_+_61715202_61715299	0.0159246	NKX3-2.p2	BC048081|Csnk1a1|93687|casein kinase 1, alpha 1	BC019740|Csnk1a1|93687|casein kinase 1, alpha 1	NM_146087|Csnk1a1|93687|casein kinase 1, alpha 1	BC025439|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr7_-_133939596_133939677	0.0157173	NKX3-2.p2	
mm9_v1_chr10_+_105907394_105907408	0.0157163	NKX3-2.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr10_-_40021920_40021980	0.0156847	NKX3-2.p2	Z14986|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC092072|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC011110|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC071220|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr1_-_43149260_43149340	0.0155748	NKX3-2.p2	AK159332|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	AK141742|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1
mm9_v1_chr17_-_37004131_37004154	0.015496	NKX3-2.p2	BC027186|Trim15|69097|tripartite motif-containing 15	NM_001024134|Trim15|69097|tripartite motif-containing 15	AK007445|Trim15|69097|tripartite motif-containing 15	NM_001177872|Trim15|69097|tripartite motif-containing 15
mm9_v1_chr14_-_21315902_21316122	0.0154283	NKX3-2.p2	AK014794|Zmynd17|74843|zinc finger, MYND domain containing 17	BC119773|Zmynd17|74843|zinc finger, MYND domain containing 17	BC119816|Zmynd17|74843|zinc finger, MYND domain containing 17	NM_029104|Zmynd17|74843|zinc finger, MYND domain containing 17
mm9_v1_chr12_+_85758189_85758266	0.015092	NKX3-2.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr12_-_47919695_47919761	0.0149211	NKX3-2.p2	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr9_-_119231439_119231567	0.0148174	NKX3-2.p2	BC046453|Oxsr1|108737|oxidative-stress responsive 1	BC060645|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr17_+_50648736_50648932	0.0146343	NKX3-2.p2	AB033615|Plcl2|224860|phospholipase C-like 2	NM_013880|Plcl2|224860|phospholipase C-like 2	AK165548|Plcl2|224860|phospholipase C-like 2	AK154288|Plcl2|224860|phospholipase C-like 2
mm9_v1_chr11_-_120852331_120852436	0.0144621	NKX3-2.p2	AK143534|Csnk1d|104318|casein kinase 1, delta	AK140317|Csnk1d|104318|casein kinase 1, delta	AK150387|Csnk1d|104318|casein kinase 1, delta	AK150815|Csnk1d|104318|casein kinase 1, delta	AK088642|Csnk1d|104318|casein kinase 1, delta	AK157812|Csnk1d|104318|casein kinase 1, delta	AK004606|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chr8_+_87356149_87356307	0.0143953	NKX3-2.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr2_-_12933305_12933373	0.0139331	NKX3-2.p2	AB044560|C1ql3|227580|C1q-like 3
mm9_v1_chr15_-_78360039_78360054	0.0138541	NKX3-2.p2	DQ002399|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	NM_028331|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC071187|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK154407|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chr4_-_15076093_15076277	0.0137766	NKX3-2.p2	AK039240|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AK081951|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AY278200|Necab1|69352|N-terminal EF-hand calcium binding protein 1	BC067055|Necab1|69352|N-terminal EF-hand calcium binding protein 1	NM_178617|Necab1|69352|N-terminal EF-hand calcium binding protein 1
mm9_v1_chr5_+_108697913_108698008	0.0137423	NKX3-2.p2	AK075713|Dr1|13486|down-regulator of transcription 1	NM_026106|Dr1|13486|down-regulator of transcription 1	AK144749|Dr1|13486|down-regulator of transcription 1	AK007230|Dr1|13486|down-regulator of transcription 1	AK090113|Dr1|13486|down-regulator of transcription 1	AK146573|Dr1|13486|down-regulator of transcription 1	AK031057|Dr1|13486|down-regulator of transcription 1	AK139866|Dr1|13486|down-regulator of transcription 1	AK018040|Dr1|13486|down-regulator of transcription 1
mm9_v1_chr18_+_37890662_37890807	0.0135338	NKX3-2.p2	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr14_+_14117313_14117372	0.0131824	NKX3-2.p2	BC026512|Synpr|72003|synaptoporin	AK005132|Synpr|72003|synaptoporin
mm9_v1_chr7_+_19813689_19813779	0.0131157	NKX3-2.p2	AK170977|Opa3|403187|optic atrophy 3 (human)	BC094601|Opa3|403187|optic atrophy 3 (human)	AK165767|Opa3|403187|optic atrophy 3 (human)	AK052774|Opa3|403187|optic atrophy 3 (human)	AK154917|Opa3|403187|optic atrophy 3 (human)	AK154960|Opa3|403187|optic atrophy 3 (human)	AK164755|Opa3|403187|optic atrophy 3 (human)	NM_207525|Opa3|403187|optic atrophy 3 (human)	AK133480|Opa3|403187|optic atrophy 3 (human)	BC132309|Opa3|403187|optic atrophy 3 (human)	BC132311|Opa3|403187|optic atrophy 3 (human)
mm9_v1_chr16_+_23058492_23058504	0.0126543	NKX3-2.p2	AY462058|Kng1|16644|kininogen 1	D84415|Kng1|16644|kininogen 1	D84435|Kng1|16644|kininogen 1
mm9_v1_chr7_-_106387077_106387128	0.0124814	NKX3-2.p2	AY157609|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK049560|Mogat2|233549|monoacylglycerol O-acyltransferase 2	BC052831|Mogat2|233549|monoacylglycerol O-acyltransferase 2	NM_177448|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK133854|Mogat2|233549|monoacylglycerol O-acyltransferase 2
mm9_v1_chr2_+_120966144_120966210	0.0123273	NKX3-2.p2	AK048809|Adal|75894|adenosine deaminase-like	AK016299|Adal|75894|adenosine deaminase-like	AK049697|Adal|75894|adenosine deaminase-like	AK039677|Adal|75894|adenosine deaminase-like	AK044025|Adal|75894|adenosine deaminase-like
mm9_v1_chr7_-_125728199_125728260	0.0122726	NKX3-2.p2	AK083189|Tmc7|209760|transmembrane channel-like gene family 7	NM_172476|Tmc7|209760|transmembrane channel-like gene family 7	AK006547|Tmc7|209760|transmembrane channel-like gene family 7	AK082562|Tmc7|209760|transmembrane channel-like gene family 7	AK132820|Tmc7|209760|transmembrane channel-like gene family 7	AY263161|Tmc7|209760|transmembrane channel-like gene family 7	AY236499|Tmc7|209760|transmembrane channel-like gene family 7
mm9_v1_chr13_+_28108080_28108091	0.012133	NKX3-2.p2	AK141285|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AK164009|Prl4a1|19110|prolactin family 4, subfamily a, member 1	BC052218|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AF011383|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AF015562|Prl4a1|19110|prolactin family 4, subfamily a, member 1	NM_011165|Prl4a1|19110|prolactin family 4, subfamily a, member 1
mm9_v1_chr2_+_144419797_144419818	0.0120287	NKX3-2.p2	AK002610|Gm561|228715|predicted gene 561	NM_001033297|Gm561|228715|predicted gene 561	BC147042|Gm561|228715|predicted gene 561	BC147043|Gm561|228715|predicted gene 561	AK010324|Gm561|228715|predicted gene 561
mm9_v1_chr16_-_94591826_94592078	0.0119845	NKX3-2.p2	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr2_+_34729897_34729955	0.0119001	NKX3-2.p2	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr3_-_88754154_88754203	0.0118085	NKX3-2.p2	BC019566|Dap3|65111|death associated protein 3	NM_001164533|Dap3|65111|death associated protein 3	NM_022994|Dap3|65111|death associated protein 3
mm9_v1_chrX_+_150266835_150266835	0.0117484	NKX3-2.p2	BC068162|Spin2|278240|spindlin family, member 2	NM_001005370|Spin2|278240|spindlin family, member 2
mm9_v1_chr13_+_47289371_47289389	0.011714	NKX3-2.p2	AK052846|Rnf144b|218215|ring finger protein 144B	NM_001170643|Rnf144b|218215|ring finger protein 144B	AK040939|Rnf144b|218215|ring finger protein 144B	BC025007|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr1_+_166237784_166237874	0.0115739	NKX3-2.p2	AK144915|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_138314|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_178071|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK043515|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK085222|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK164652|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK044962|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC038021|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC049225|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr2_-_174120889_174120936	0.0114233	NKX3-2.p2	AF319945|Nespas|56802|neuroendocrine secretory protein antisense	AK153813|Nespas|56802|neuroendocrine secretory protein antisense
mm9_v1_chr2_-_104857155_104857253	0.011226	NKX3-2.p2	BC116787|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC116789|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK077480|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC005598|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC103795|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	NM_145380|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK168066|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK084738|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK146222|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M
mm9_v1_chr11_+_80022587_80022605	0.0109899	NKX3-2.p2	AK169811|Rhot1|59040|ras homolog gene family, member T1	AK021245|Rhot1|59040|ras homolog gene family, member T1	AK019059|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr5_+_144383313_144383461	0.0108609	NKX3-2.p2	NM_011182|Cyth3|19159|cytohesin 3	AK142407|Cyth3|19159|cytohesin 3	AK220565|Cyth3|19159|cytohesin 3	AK159229|Cyth3|19159|cytohesin 3	BC035296|Cyth3|19159|cytohesin 3	AK036191|Cyth3|19159|cytohesin 3	AK168566|Cyth3|19159|cytohesin 3	AF084221|Cyth3|19159|cytohesin 3	AB013470|Cyth3|19159|cytohesin 3
mm9_v1_chr11_+_115465436_115465505	0.0108506	NKX3-2.p2	AK131937|Mrps7|50529|mitchondrial ribosomal protein S7	AK012225|Mrps7|50529|mitchondrial ribosomal protein S7	BC049636|Mrps7|50529|mitchondrial ribosomal protein S7	NM_025305|Mrps7|50529|mitchondrial ribosomal protein S7	AK162024|Mrps7|50529|mitchondrial ribosomal protein S7	AK009251|Mrps7|50529|mitchondrial ribosomal protein S7
mm9_v1_chr7_+_133968166_133968166	0.0108395	NKX3-2.p2	BC055444|Fam57b|68952|family with sequence similarity 57, member B	NM_001146347|Fam57b|68952|family with sequence similarity 57, member B
mm9_v1_chr17_-_10512217_10512250	0.0108209	NKX3-2.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr4_-_129255652_129255823	0.0107798	NKX3-2.p2	AK134621|Fam167b|230766|family with sequence similarity 167, member B	BC030183|Fam167b|230766|family with sequence similarity 167, member B	AK143928|Fam167b|230766|family with sequence similarity 167, member B	NM_182783|Fam167b|230766|family with sequence similarity 167, member B
mm9_v1_chr5_+_3543815_3543891	0.0107705	NKX3-2.p2	AK008115|Fam133b|68152|family with sequence similarity 133, member B	AK019188|Fam133b|68152|family with sequence similarity 133, member B	NM_001042501|Fam133b|68152|family with sequence similarity 133, member B	AK020011|Fam133b|68152|family with sequence similarity 133, member B	BC147310|Fam133b|68152|family with sequence similarity 133, member B	BC147311|Fam133b|68152|family with sequence similarity 133, member B	BC172033|Fam133b|68152|family with sequence similarity 133, member B	BC027051|Fam133b|68152|family with sequence similarity 133, member B	AK161505|Fam133b|68152|family with sequence similarity 133, member B
mm9_v1_chr8_+_113443764_113443921	0.0106878	NKX3-2.p2	NM_009179|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK031052|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK034863|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK053827|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK029246|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	BC066064|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
mm9_v1_chr13_-_39052356_39052405	0.0105884	NKX3-2.p2	AK077208|Slc35b3|108652|solute carrier family 35, member B3	AK079504|Slc35b3|108652|solute carrier family 35, member B3	BC006881|Slc35b3|108652|solute carrier family 35, member B3	AK076592|Slc35b3|108652|solute carrier family 35, member B3	NM_001170430|Slc35b3|108652|solute carrier family 35, member B3	NM_134060|Slc35b3|108652|solute carrier family 35, member B3
mm9_v1_chr12_-_89420210_89420337	0.010372	NKX3-2.p2	BC094894|Gm10436|100039315|predicted gene 10436	AK139576|Gm10436|100039315|predicted gene 10436	NM_001105254|Gm10436|100039315|predicted gene 10436
mm9_v1_chr2_+_174586119_174586276	0.0103663	NKX3-2.p2	U32330|Edn3|13616|endothelin 3	AK079150|Edn3|13616|endothelin 3	AK049775|Edn3|13616|endothelin 3	NM_007903|Edn3|13616|endothelin 3
mm9_v1_chr10_-_93498482_93498486	0.0102891	NKX3-2.p2	AK042540|Vezt|215008|vezatin, adherens junctions transmembrane protein
mm9_v1_chr3_-_116365414_116365594	0.0100806	NKX3-2.p2	AK135865|Hiat1|15247|hippocampus abundant gene transcript 1	BC118047|Hiat1|15247|hippocampus abundant gene transcript 1	D88315|Hiat1|15247|hippocampus abundant gene transcript 1	AK004779|Hiat1|15247|hippocampus abundant gene transcript 1	AK169626|Hiat1|15247|hippocampus abundant gene transcript 1	AK158838|Hiat1|15247|hippocampus abundant gene transcript 1	NM_008246|Hiat1|15247|hippocampus abundant gene transcript 1
mm9_v1_chr8_+_87380871_87380960	0.0100316	NKX3-2.p2	NM_025648|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK154629|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK163038|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK016506|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK002577|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK031697|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK044637|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	BC006862|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	BC013533|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK171872|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK084031|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	CT010350|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit
mm9_v1_chr4_+_147932563_147932565	0.00982291	NKX3-2.p2	AK168700|Exosc10|50912|exosome component 10
mm9_v1_chr16_-_36874886_36874911	0.00979441	NKX3-2.p2	BC056626|Eaf2|106389|ELL associated factor 2	NM_134111|Eaf2|106389|ELL associated factor 2
mm9_v1_chr11_-_89163367_89163398	0.00957266	NKX3-2.p2	BC132527|Nog|18121|noggin	BC138148|Nog|18121|noggin
mm9_v1_chr3_-_58329780_58329826	0.00936485	NKX3-2.p2	NM_030685|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr7_+_29649404_29649463	0.00928029	NKX3-2.p2	NM_008496|Lgals7|16858|lectin, galactose binding, soluble 7	BC116838|Lgals7|16858|lectin, galactose binding, soluble 7	BC116840|Lgals7|16858|lectin, galactose binding, soluble 7
mm9_v1_chr10_+_11063201_11063297	0.00919049	NKX3-2.p2	AF124044|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK155519|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	NM_010146|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK041609|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
mm9_v1_chr11_-_94361285_94361312	0.00915733	NKX3-2.p2	NM_027984|Epn3|71889|epsin 3
mm9_v1_chr4_+_137773045_137773112	0.00907221	NKX3-2.p2	NM_001122897|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr9_-_107612805_107612805	0.00892048	NKX3-2.p2	AK053632|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	NM_011349|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm9_v1_chr6_-_28211910_28211939	0.0087896	NKX3-2.p2	BC066073|Zfp800|627049|zinc finger protein 800
mm9_v1_chr7_-_31107320_31107393	0.00865177	NKX3-2.p2	AK155437|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	AK002462|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	BC147173|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	BC147174|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	NM_001033140|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1
mm9_v1_chr8_-_37312569_37312569	0.0086082	NKX3-2.p2	NM_001081150|Lonrf1|244421|LON peptidase N-terminal domain and ring finger 1
mm9_v1_chr1_+_36569412_36569489	0.00855644	NKX3-2.p2	BC108417|Cnnm3|94218|cyclin M3
mm9_v1_chr14_-_47006944_47006954	0.00854054	NKX3-2.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr2_+_162813216_162813237	0.00849795	NKX3-2.p2	NM_013731|Sgk2|27219|serum/glucocorticoid regulated kinase 2	AK050009|Sgk2|27219|serum/glucocorticoid regulated kinase 2
mm9_v1_chr19_+_10708722_10708782	0.00842075	NKX3-2.p2	AK005010|Vwce|71768|von Willebrand factor C and EGF domains	NM_027913|Vwce|71768|von Willebrand factor C and EGF domains	BC030181|Vwce|71768|von Willebrand factor C and EGF domains	BC043473|Vwce|71768|von Willebrand factor C and EGF domains
mm9_v1_chr17_-_26206121_26206180	0.00833785	NKX3-2.p2	NM_001162868|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)	NM_001162869|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)
mm9_v1_chr4_+_147932566_147932571	0.00828722	NKX3-2.p2	AF091392|Exosc10|50912|exosome component 10	AK162887|Exosc10|50912|exosome component 10	AK017621|Exosc10|50912|exosome component 10	BC027840|Exosc10|50912|exosome component 10
mm9_v1_chr8_+_107872704_107872772	0.0081723	NKX3-2.p2	BC151197|Slc9a5|277973|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm9_v1_chr6_+_139535757_139535771	0.00808897	NKX3-2.p2	BC099684|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AB008791|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC150813|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_207683|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr3_-_88262805_88262805	0.00752057	NKX3-2.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr12_+_85983845_85983845	0.00709725	NKX3-2.p2	BC103771|Vrtn|432677|vertebrae development homolog (pig)	NM_001033776|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr19_+_24748487_24748497	0.00702519	NKX3-2.p2	AK086895|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK142952|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	BC087877|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK143762|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	NM_183160|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene
mm9_v1_chr12_+_30219769_30219800	0.00698619	NKX3-2.p2	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr4_+_125168074_125168079	0.00669664	NKX3-2.p2	NM_001081097|Grik3|14807|glutamate receptor, ionotropic, kainate 3	BC118004|Grik3|14807|glutamate receptor, ionotropic, kainate 3
mm9_v1_chr2_+_118752232_118752411	0.00661574	NKX3-2.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr16_+_31948631_31948724	0.00660925	NKX3-2.p2	NM_026554|Ncbp2|68092|nuclear cap binding protein subunit 2	AK008980|Ncbp2|68092|nuclear cap binding protein subunit 2	AK078181|Ncbp2|68092|nuclear cap binding protein subunit 2	AK147027|Ncbp2|68092|nuclear cap binding protein subunit 2	AK012659|Ncbp2|68092|nuclear cap binding protein subunit 2	AK014016|Ncbp2|68092|nuclear cap binding protein subunit 2	AK135597|Ncbp2|68092|nuclear cap binding protein subunit 2	AK077841|Ncbp2|68092|nuclear cap binding protein subunit 2	BC118926|Ncbp2|68092|nuclear cap binding protein subunit 2
mm9_v1_chr16_+_13819369_13819496	0.00656046	NKX3-2.p2	NM_010946|Ntan1|18203|N-terminal Asn amidase	BC030172|Ntan1|18203|N-terminal Asn amidase	U57692|Ntan1|18203|N-terminal Asn amidase	AK041112|Ntan1|18203|N-terminal Asn amidase
mm9_v1_chr8_-_71613058_71613120	0.00650478	NKX3-2.p2	BC027192|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	BC031146|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	NM_153054|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr9_-_44076207_44076269	0.00635101	NKX3-2.p2	AK170088|Nlrx1|270151|NLR family member X1	AK089260|Nlrx1|270151|NLR family member X1	AK145780|Nlrx1|270151|NLR family member X1	NM_001163743|Nlrx1|270151|NLR family member X1
mm9_v1_chr12_-_86113816_86113911	0.00634466	NKX3-2.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr3_+_36374858_36374870	0.00619744	NKX3-2.p2	AK007933|1810062G17Rik|72282|RIKEN cDNA 1810062G17 gene
mm9_v1_chr18_+_86564229_86564343	0.0060713	NKX3-2.p2	AK081325|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1	NM_144946|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1
mm9_v1_chr9_-_14185399_14185474	0.00599109	NKX3-2.p2	BC096490|Endod1|71946|endonuclease domain containing 1	AK079741|Endod1|71946|endonuclease domain containing 1	AK078056|Endod1|71946|endonuclease domain containing 1	BC019813|Endod1|71946|endonuclease domain containing 1	AK086102|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr16_-_50432421_50432504	0.00583125	NKX3-2.p2	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr7_-_17402066_17402094	0.00576709	NKX3-2.p2	AK156156|Fkrp|243853|fukutin related protein	AK135089|Fkrp|243853|fukutin related protein	AK168308|Fkrp|243853|fukutin related protein	NM_173430|Fkrp|243853|fukutin related protein	AK166068|Fkrp|243853|fukutin related protein
mm9_v1_chr19_+_4711207_4711210	0.00565133	NKX3-2.p2	AK147671|Spnb3|20743|spectrin beta 3
mm9_v1_chr18_+_74427821_74428008	0.00559237	NKX3-2.p2	BC069837|Mbd1|17190|methyl-CpG binding domain protein 1	AK156401|Mbd1|17190|methyl-CpG binding domain protein 1	AK004624|Mbd1|17190|methyl-CpG binding domain protein 1	NM_013594|Mbd1|17190|methyl-CpG binding domain protein 1	AK162858|Mbd1|17190|methyl-CpG binding domain protein 1	AF072240|Mbd1|17190|methyl-CpG binding domain protein 1
mm9_v1_chr8_-_108535317_108535385	0.00535107	NKX3-2.p2	AK010396|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	AK163480|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC058568|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120556|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120582|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	NM_028038|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm9_v1_chr2_-_102026486_102026616	0.00534096	NKX3-2.p2	AK032208|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	AK029683|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	NM_178886|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138178|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC145174|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138177|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3
mm9_v1_chr8_+_4493501_4493520	0.0053384	NKX3-2.p2	AK028945|Lass4|67260|LAG1 homolog, ceramide synthase 4	BC003946|Lass4|67260|LAG1 homolog, ceramide synthase 4	AY029531|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr7_+_36182085_36182138	0.00531798	NKX3-2.p2	AK012067|Ccdc123|72140|coiled-coil domain containing 123	NM_028120|Ccdc123|72140|coiled-coil domain containing 123	AK082303|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr2_-_126501326_126501329	0.00524225	NKX3-2.p2	AK040722|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr9_+_121628258_121628322	0.00520626	NKX3-2.p2	AK163916|Nktr|18087|natural killer tumor recognition sequence	L04289|Nktr|18087|natural killer tumor recognition sequence	NM_010918|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr15_-_79158526_79158679	0.00516515	NKX3-2.p2	BC049778|Pla2g6|53357|phospholipase A2, group VI	BC003487|Pla2g6|53357|phospholipase A2, group VI	AK153333|Pla2g6|53357|phospholipase A2, group VI	BC052845|Pla2g6|53357|phospholipase A2, group VI	AK144495|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr11_-_74403603_74403659	0.0051549	NKX3-2.p2	NM_001015046|Rap1gap2|380711|RAP1 GTPase activating protein 2
mm9_v1_chr11_-_58949876_58949876	0.00511918	NKX3-2.p2	NM_001171512|Obscn|380698|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	NM_199152|Obscn|380698|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
mm9_v1_chr13_-_41942856_41942989	0.00496997	NKX3-2.p2	AK029025|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene	NM_175417|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene	AK079178|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene	AK135327|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene	NM_001145875|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene
mm9_v1_chr9_-_20935610_20935730	0.00484894	NKX3-2.p2	AK134154|Tyk2|54721|tyrosine kinase 2	AK155923|Tyk2|54721|tyrosine kinase 2	AK171609|Tyk2|54721|tyrosine kinase 2	AF173032|Tyk2|54721|tyrosine kinase 2	AK170107|Tyk2|54721|tyrosine kinase 2	AK170940|Tyk2|54721|tyrosine kinase 2	AK154438|Tyk2|54721|tyrosine kinase 2	AK159303|Tyk2|54721|tyrosine kinase 2	AK165483|Tyk2|54721|tyrosine kinase 2	AK167726|Tyk2|54721|tyrosine kinase 2	NM_018793|Tyk2|54721|tyrosine kinase 2
mm9_v1_chr15_-_66801198_66801204	0.00479749	NKX3-2.p2	AK170439|Ndrg1|17988|N-myc downstream regulated gene 1	AK004548|Ndrg1|17988|N-myc downstream regulated gene 1	AK098075|Ndrg1|17988|N-myc downstream regulated gene 1	AK161860|Ndrg1|17988|N-myc downstream regulated gene 1	AK165007|Ndrg1|17988|N-myc downstream regulated gene 1	AK170281|Ndrg1|17988|N-myc downstream regulated gene 1	AK170636|Ndrg1|17988|N-myc downstream regulated gene 1	U60593|Ndrg1|17988|N-myc downstream regulated gene 1	AK170809|Ndrg1|17988|N-myc downstream regulated gene 1	NM_008681|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr18_-_24178797_24178851	0.00457893	NKX3-2.p2	BC011345|Zfp191|59057|zinc finger protein 191
mm9_v1_chr2_-_152656236_152656402	0.00451153	NKX3-2.p2	L35049|Bcl2l1|12048|BCL2-like 1	U51279|Bcl2l1|12048|BCL2-like 1	AK172250|Bcl2l1|12048|BCL2-like 1	U51277|Bcl2l1|12048|BCL2-like 1	AK146461|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr6_+_135148004_135148077	0.00444355	NKX3-2.p2	AK169892|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	NM_028982|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137674|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK018428|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK155128|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK039401|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC079676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene
mm9_v1_chr9_+_107897371_107897371	0.00442664	NKX3-2.p2	NM_001122635|Cdhr4|69398|cadherin-related family member 4
mm9_v1_chr2_+_124962427_124962427	0.00438436	NKX3-2.p2	AK141570|Ctxn2|381418|cortexin 2	NM_001162934|Ctxn2|381418|cortexin 2
mm9_v1_chr2_+_181336020_181336108	0.00428529	NKX3-2.p2	AK145461|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	NM_133701|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	AK166890|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	BC025030|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	AK011639|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	AK081998|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	BC014869|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	BC023691|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)
mm9_v1_chr15_-_76369126_76369196	0.00427348	NKX3-2.p2	BC044784|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC054377|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC011485|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC026818|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AB041571|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AF176522|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AK052585|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AK040458|Fbxl6|30840|F-box and leucine-rich repeat protein 6	NM_013909|Fbxl6|30840|F-box and leucine-rich repeat protein 6
mm9_v1_chr7_-_14574936_14574936	0.00419743	NKX3-2.p2	NM_001101534|Sult2a4|434121|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 4
mm9_v1_chr11_-_120794140_120794186	0.00402546	NKX3-2.p2	AK220306|Ccdc57|71276|coiled-coil domain containing 57	BC056480|Ccdc57|71276|coiled-coil domain containing 57	NM_027745|Ccdc57|71276|coiled-coil domain containing 57
mm9_v1_chr9_+_44287171_44287176	0.00392489	NKX3-2.p2	AK078316|C030014I23Rik|77381|RIKEN cDNA C030014I23 gene
mm9_v1_chr2_-_38142866_38142913	0.00370704	NKX3-2.p2	BC027786|Dennd1a|227801|DENN/MADD domain containing 1A	AK137530|Dennd1a|227801|DENN/MADD domain containing 1A	BC023016|Dennd1a|227801|DENN/MADD domain containing 1A	NM_146122|Dennd1a|227801|DENN/MADD domain containing 1A
mm9_v1_chr11_-_98671371_98671404	0.0036467	NKX3-2.p2	AK087290|Gm12359|100037262|predicted gene 12359	AK142978|Gm12359|100037262|predicted gene 12359
mm9_v1_chr11_+_120582777_120582942	0.00346452	NKX3-2.p2	AK150203|Rac3|170758|RAS-related C3 botulinum substrate 3	NM_133223|Rac3|170758|RAS-related C3 botulinum substrate 3	AK089930|Rac3|170758|RAS-related C3 botulinum substrate 3	BC117028|Rac3|170758|RAS-related C3 botulinum substrate 3	BC119041|Rac3|170758|RAS-related C3 botulinum substrate 3	AB040819|Rac3|170758|RAS-related C3 botulinum substrate 3	AY974601|Rac3|170758|RAS-related C3 botulinum substrate 3
mm9_v1_chr7_-_135441621_135441663	0.00339916	NKX3-2.p2	AK170611|BC017158|233913|cDNA sequence BC017158	AK149645|BC017158|233913|cDNA sequence BC017158	AK164488|BC017158|233913|cDNA sequence BC017158	AK165287|BC017158|233913|cDNA sequence BC017158	AK148236|BC017158|233913|cDNA sequence BC017158	NM_145590|BC017158|233913|cDNA sequence BC017158
mm9_v1_chr12_-_88607158_88607275	0.00335192	NKX3-2.p2	BC016646|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK082261|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK049643|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK079055|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK038165|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK046322|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK145043|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142580|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142581|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK020129|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr9_+_46048993_46049057	0.0030955	NKX3-2.p2	AK169277|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr9_+_44286856_44286889	0.00284099	NKX3-2.p2	AK021081|C030014I23Rik|77381|RIKEN cDNA C030014I23 gene
mm9_v1_chr6_+_125299717_125299857	0.00272754	NKX3-2.p2	NM_011609|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AK154388|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	L26349|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	X57796|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC096429|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AK159989|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC052675|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC004599|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	M60468|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	X59238|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a
mm9_v1_chr12_-_117501430_117501510	0.00267125	NKX3-2.p2	BC138916|Wdr60|217935|WD repeat domain 60	AK046002|Wdr60|217935|WD repeat domain 60	AK140242|Wdr60|217935|WD repeat domain 60	AK079764|Wdr60|217935|WD repeat domain 60	AK032986|Wdr60|217935|WD repeat domain 60	AK046399|Wdr60|217935|WD repeat domain 60	AK052482|Wdr60|217935|WD repeat domain 60	AK144138|Wdr60|217935|WD repeat domain 60	NM_146039|Wdr60|217935|WD repeat domain 60
mm9_v1_chr8_+_4493404_4493448	0.00263051	NKX3-2.p2	NM_026058|Lass4|67260|LAG1 homolog, ceramide synthase 4	AK134887|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr8_+_96561162_96561175	0.00255688	NKX3-2.p2	AK166343|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr2_+_4073908_4073934	0.00248432	NKX3-2.p2	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr11_-_106257752_106257921	0.00241864	NKX3-2.p2	AK162104|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1
mm9_v1_chr3_-_19595395_19595395	0.00238272	NKX3-2.p2	NM_205769|Crh|12918|corticotropin releasing hormone
mm9_v1_chr7_+_20593371_20593373	0.00219516	NKX3-2.p2	AY596196|Nlrp9b|243874|NLR family, pyrin domain containing 9B	NM_194058|Nlrp9b|243874|NLR family, pyrin domain containing 9B	BC141249|Nlrp9b|243874|NLR family, pyrin domain containing 9B
mm9_v1_chr19_+_38171568_38171616	0.00202771	NKX3-2.p2	BC053698|Gpr120|107221|G protein-coupled receptor 120	NM_181748|Gpr120|107221|G protein-coupled receptor 120	AK131616|Gpr120|107221|G protein-coupled receptor 120	AB115769|Gpr120|107221|G protein-coupled receptor 120	AY288424|Gpr120|107221|G protein-coupled receptor 120
mm9_v1_chr16_-_26526854_26526915	0.00195282	NKX3-2.p2	AK142524|Tmem207|100043057|transmembrane protein 207	NM_001101640|Tmem207|100043057|transmembrane protein 207
mm9_v1_chr9_+_50425460_50425487	0.0019404	NKX3-2.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr2_-_130250376_130250436	0.00175856	NKX3-2.p2	NM_001114541|Fam113a|319513|family with sequence similarity 113, member A	BC064802|Fam113a|319513|family with sequence similarity 113, member A	AK031469|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr7_-_91827857_91827907	0.0016565	NKX3-2.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr5_+_137943876_137943900	0.00145658	NKX3-2.p2	AK020298|9130604C24Rik|77707|RIKEN cDNA 9130604C24 gene
mm9_v1_chr9_+_119803988_119804030	0.00127346	NKX3-2.p2	BC050106|Wdr48|67561|WD repeat domain 48	AK031244|Wdr48|67561|WD repeat domain 48	BC062967|Wdr48|67561|WD repeat domain 48	AK018396|Wdr48|67561|WD repeat domain 48	AK030041|Wdr48|67561|WD repeat domain 48	AK035273|Wdr48|67561|WD repeat domain 48	AK035864|Wdr48|67561|WD repeat domain 48	AK043970|Wdr48|67561|WD repeat domain 48	AK128953|Wdr48|67561|WD repeat domain 48	NM_026236|Wdr48|67561|WD repeat domain 48	AK033631|Wdr48|67561|WD repeat domain 48	AK012599|Wdr48|67561|WD repeat domain 48	BC048155|Wdr48|67561|WD repeat domain 48
mm9_v1_chr4_-_151526315_151526315	0.0012386	NKX3-2.p2	AF239886|Espn|56226|espin	NM_207687|Espn|56226|espin
mm9_v1_chr3_-_89083562_89083576	0.00120681	NKX3-2.p2	AK009144|Efna1|13636|ephrin A1	NM_010107|Efna1|13636|ephrin A1
mm9_v1_chr9_-_111592643_111592751	0.00114454	NKX3-2.p2	BC107325|Stac|20840|src homology three (SH3) and cysteine rich domain	BC107326|Stac|20840|src homology three (SH3) and cysteine rich domain	D86639|Stac|20840|src homology three (SH3) and cysteine rich domain	NM_016853|Stac|20840|src homology three (SH3) and cysteine rich domain	AK134777|Stac|20840|src homology three (SH3) and cysteine rich domain	AK143440|Stac|20840|src homology three (SH3) and cysteine rich domain
mm9_v1_chr8_+_121961044_121961092	0.00107879	NKX3-2.p2	BC022135|Osgin1|71839|oxidative stress induced growth inhibitor 1	NM_027950|Osgin1|71839|oxidative stress induced growth inhibitor 1	BC006032|Osgin1|71839|oxidative stress induced growth inhibitor 1	BC110674|Osgin1|71839|oxidative stress induced growth inhibitor 1	BC132440|Osgin1|71839|oxidative stress induced growth inhibitor 1	BC138192|Osgin1|71839|oxidative stress induced growth inhibitor 1
mm9_v1_chr6_+_70794501_70794578	0.00106552	NKX3-2.p2	BC054809|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	NM_010121|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AF076681|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK010397|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK046355|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3
mm9_v1_chr3_-_72861724_72861729	0.000983911	NKX3-2.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr7_+_134615022_134615162	0.000866199	NKX3-2.p2	BC055033|Prr14|233895|proline rich 14	NM_145589|Prr14|233895|proline rich 14	AK133884|Prr14|233895|proline rich 14
mm9_v1_chr19_+_21354915_21354945	0.000797112	NKX3-2.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chrX_+_155852641_155852717	0.000753116	NKX3-2.p2	AK013466|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr6_-_128250825_128250830	0.000741119	NKX3-2.p2	D87966|Tead4|21679|TEA domain family member 4	D87965|Tead4|21679|TEA domain family member 4	NM_001080979|Tead4|21679|TEA domain family member 4	NM_011567|Tead4|21679|TEA domain family member 4
mm9_v1_chr6_-_58857000_58857134	0.000653485	NKX3-2.p2	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr11_+_4086804_4086893	0.0005603	NKX3-2.p2	AK140872|Tbc1d10a|103724|TBC1 domain family, member 10a	AK220243|Tbc1d10a|103724|TBC1 domain family, member 10a	BC018300|Tbc1d10a|103724|TBC1 domain family, member 10a	NM_134023|Tbc1d10a|103724|TBC1 domain family, member 10a	AK153677|Tbc1d10a|103724|TBC1 domain family, member 10a	BC037230|Tbc1d10a|103724|TBC1 domain family, member 10a
mm9_v1_chr18_+_35776026_35776084	0.000531117	NKX3-2.p2	AK012839|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr12_-_11157178_11157178	0.000516852	NKX3-2.p2	AK046054|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_173417|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm9_v1_chr3_-_88058593_88058623	0.000401113	NKX3-2.p2	AY254685|Rhbg|58176|Rhesus blood group-associated B glycoprotein	AF193808|Rhbg|58176|Rhesus blood group-associated B glycoprotein	AK081882|Rhbg|58176|Rhesus blood group-associated B glycoprotein	NM_021375|Rhbg|58176|Rhesus blood group-associated B glycoprotein	BC029236|Rhbg|58176|Rhesus blood group-associated B glycoprotein
mm9_v1_chr17_-_45823145_45823192	0.000391361	NKX3-2.p2	NM_198167|Tmem63b|224807|transmembrane protein 63b	AK159673|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr8_+_13105702_13105757	0.000379394	NKX3-2.p2	NM_146207|Cul4a|99375|cullin 4A	AK144802|Cul4a|99375|cullin 4A	AK166251|Cul4a|99375|cullin 4A	AK170722|Cul4a|99375|cullin 4A	AK168215|Cul4a|99375|cullin 4A	AK084008|Cul4a|99375|cullin 4A	BC010211|Cul4a|99375|cullin 4A	AK150237|Cul4a|99375|cullin 4A
mm9_v1_chr8_-_127472730_127472856	0.000333992	NKX3-2.p2	AJ310546|Egln1|112405|EGL nine homolog 1 (C. elegans)
mm9_v1_chr1_-_56694278_56694294	0.00030941	NKX3-2.p2	AK016803|Hsfy2|71066|heat shock transcription factor, Y linked 2	BC049724|Hsfy2|71066|heat shock transcription factor, Y linked 2	NM_027661|Hsfy2|71066|heat shock transcription factor, Y linked 2
mm9_v1_chr13_+_34027890_34027939	0.000200146	NKX3-2.p2	AK004186|1110046J04Rik|68808|RIKEN cDNA 1110046J04 gene
mm9_v1_chr1_-_140516239_140516335	0.00013858	NKX3-2.p2	BC037697|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK165583|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	BC026541|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK035502|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	NM_021605|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK078639|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK088173|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7	AK149308|Nek7|59125|NIMA (never in mitosis gene a)-related expressed kinase 7
mm9_v1_chr3_+_87723411_87723427	0.000103877	NKX3-2.p2	AK167623|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr9_+_21420612_21420824	8.33619e-05	NKX3-2.p2	BC079560|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_001174078|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_001174079|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_011417|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK147285|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK166837|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK160825|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK135308|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK142137|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC061214|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC060229|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC023830|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC032162|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC054056|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC014760|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK051530|Smarca4|20586|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
