mm9_v1_chr4_+_146124224_146124224	12.4884	NKX6-1,2.p2	NM_001177546|Zfp600|667666|zinc finger protein 600
mm9_v1_chr4_+_145850602_145850602	11.5827	NKX6-1,2.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr4_+_146395958_146395958	11.5827	NKX6-1,2.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr8_+_34681015_34681015	11.0107	NKX6-1,2.p2	AF285589|Tex15|104271|testis expressed gene 15	NM_031374|Tex15|104271|testis expressed gene 15
mm9_v1_chr4_+_146927385_146927415	9.72282	NKX6-1,2.p2	NM_001014397|Gm13154|433804|predicted gene 13154	BC085112|Gm13154|433804|predicted gene 13154
mm9_v1_chr4_+_145260599_145260599	9.6223	NKX6-1,2.p2	BC096593|Gm13242|100041379|predicted gene 13242	NM_001103158|Gm13242|100041379|predicted gene 13242
mm9_v1_chr11_-_87639611_87639615	9.30454	NKX6-1,2.p2	BC016212|Lpo|76113|lactoperoxidase	NM_080420|Lpo|76113|lactoperoxidase
mm9_v1_chr3_+_137976249_137976280	9.1877	NKX6-1,2.p2	AK028114|Adh6a|69117|alcohol dehydrogenase 6A (class V)	NM_026945|Adh6a|69117|alcohol dehydrogenase 6A (class V)	AK007397|Adh6a|69117|alcohol dehydrogenase 6A (class V)	BC130016|Adh6a|69117|alcohol dehydrogenase 6A (class V)
mm9_v1_chr10_-_28706096_28706111	8.8738	NKX6-1,2.p2	BC021783|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	BC055432|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK075881|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009183|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK008407|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009278|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009369|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009472|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009516|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009574|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009594|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009610|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009872|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009911|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009921|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009961|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010028|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010108|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010978|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010037|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010222|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	NM_026336|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene
mm9_v1_chr11_+_76718046_76718079	7.8509	NKX6-1,2.p2	AK009118|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	NM_025655|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC061082|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC022683|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1
mm9_v1_chr1_+_152166546_152166560	7.41423	NKX6-1,2.p2	AK020798|Pdc|20028|phosducin	L08075|Pdc|20028|phosducin	NM_001159730|Pdc|20028|phosducin	NM_024458|Pdc|20028|phosducin	BC021920|Pdc|20028|phosducin	BC037176|Pdc|20028|phosducin	BC012507|Pdc|20028|phosducin
mm9_v1_chr7_-_52965801_52965838	7.38396	NKX6-1,2.p2	AK198375|Sphk2|56632|sphingosine kinase 2	AK202851|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr4_+_122366545_122366557	7.11295	NKX6-1,2.p2	AY077734|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene	AK020534|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr4_-_147016606_147016616	6.82717	NKX6-1,2.p2	BC058858|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene	NM_145078|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene
mm9_v1_chr1_-_152011986_152012077	6.43691	NKX6-1,2.p2	
mm9_v1_chr4_+_122366498_122366501	6.26287	NKX6-1,2.p2	NM_023865|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr4_+_122366510_122366517	6.17867	NKX6-1,2.p2	AF319955|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr14_-_44579933_44579933	6.05997	NKX6-1,2.p2	NM_001011876|Ang6|630952|angiogenin, ribonuclease A family, member 6
mm9_v1_chr7_+_52965052_52965376	5.81466	NKX6-1,2.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr16_-_58928469_58928469	5.7339	NKX6-1,2.p2	NM_146999|Olfr181|259001|olfactory receptor 181
mm9_v1_chr16_+_96689373_96689378	5.52779	NKX6-1,2.p2	X17320|Pcp4|18546|Purkinje cell protein 4
mm9_v1_chr7_-_106987766_106987861	5.52209	NKX6-1,2.p2	AK180141|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm9_v1_chrX_-_26129763_26129763	5.46165	NKX6-1,2.p2	BC048742|Gm14525|100039120|predicted gene 14525	NM_001162364|Gm14525|100039120|predicted gene 14525
mm9_v1_chrX_-_24728580_24728580	5.46143	NKX6-1,2.p2	BC087929|Gm5169|382277|predicted gene 5169	NM_001040669|Gm5169|382277|predicted gene 5169
mm9_v1_chr7_-_25873560_25873562	5.35043	NKX6-1,2.p2	
mm9_v1_chr11_+_19879583_19879598	5.33212	NKX6-1,2.p2	
mm9_v1_chr7_+_23656242_23656242	5.28221	NKX6-1,2.p2	NM_001166724|Vmn1r160|620758|vomeronasal 1 receptor 160
mm9_v1_chr16_-_44333103_44333308	5.23662	NKX6-1,2.p2	AK171920|Sidt1|320007|SID1 transmembrane family, member 1	AK172408|Sidt1|320007|SID1 transmembrane family, member 1	AK171897|Sidt1|320007|SID1 transmembrane family, member 1	AK047199|Sidt1|320007|SID1 transmembrane family, member 1	AK046836|Sidt1|320007|SID1 transmembrane family, member 1
mm9_v1_chr1_+_19202046_19202134	5.22702	NKX6-1,2.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chrX_-_24077885_24077885	5.12808	NKX6-1,2.p2	NM_001100444|Gm5934|546272|predicted gene 5934
mm9_v1_chr11_+_87476588_87476588	5.10849	NKX6-1,2.p2	AK032782|Rnf43|207742|ring finger protein 43	NM_172448|Rnf43|207742|ring finger protein 43
mm9_v1_chr6_+_41797547_41797583	4.98277	NKX6-1,2.p2	AK138795|Pip|18716|prolactin induced protein	NM_008843|Pip|18716|prolactin induced protein	S73282|Pip|18716|prolactin induced protein	X02510|Pip|18716|prolactin induced protein	BC028889|Pip|18716|prolactin induced protein	AB017907|Pip|18716|prolactin induced protein	BC018264|Pip|18716|prolactin induced protein
mm9_v1_chr7_+_28902406_28902521	4.94524	NKX6-1,2.p2	BC024494|Fcgbp|215384|Fc fragment of IgG binding protein	BC100564|Fcgbp|215384|Fc fragment of IgG binding protein
mm9_v1_chr14_+_80400057_80400108	4.94084	NKX6-1,2.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chrX_-_26362794_26362794	4.88823	NKX6-1,2.p2	NM_001104946|Gm2012|100039030|predicted gene 2012	NM_001114754|Gm6121|619991|predicted gene 6121
mm9_v1_chr3_+_107895985_107896200	4.86933	NKX6-1,2.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr6_-_66629677_66629677	4.79858	NKX6-1,2.p2	NM_134167|Vmn1r35|171185|vomeronasal 1 receptor 35
mm9_v1_chrX_-_75491259_75491259	4.65268	NKX6-1,2.p2	NM_001126321|Gm14743|236874|predicted gene 14743
mm9_v1_chr4_-_34754469_34754554	4.61902	NKX6-1,2.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chr16_+_96689206_96689212	4.60789	NKX6-1,2.p2	BC061164|Pcp4|18546|Purkinje cell protein 4	NM_008791|Pcp4|18546|Purkinje cell protein 4
mm9_v1_chr5_-_64360058_64360140	4.54295	NKX6-1,2.p2	AK133845|Rell1|100532|RELT-like 1	AK159944|Rell1|100532|RELT-like 1	AK161061|Rell1|100532|RELT-like 1	BC031198|Rell1|100532|RELT-like 1	BC066137|Rell1|100532|RELT-like 1	BC066160|Rell1|100532|RELT-like 1	AK140108|Rell1|100532|RELT-like 1	NM_145923|Rell1|100532|RELT-like 1
mm9_v1_chrX_+_75370805_75370805	4.53142	NKX6-1,2.p2	NM_001085534|Gm5938|546335|predicted gene 5938
mm9_v1_chrX_-_26904190_26904250	4.49605	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486
mm9_v1_chrX_-_24498453_24498513	4.49605	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486
mm9_v1_chr8_+_22437072_22437123	4.45724	NKX6-1,2.p2	NM_007851|Defa5|13239|defensin, alpha, 5	BC119610|Defa5|13239|defensin, alpha, 5
mm9_v1_chr8_+_22204716_22204716	4.45302	NKX6-1,2.p2	NM_001177481|Gm10104|100041688|predicted gene 10104
mm9_v1_chrX_+_29130521_29130581	4.45227	NKX6-1,2.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chr14_+_51748742_51748810	4.45054	NKX6-1,2.p2	NM_030098|Rnase6|78416|ribonuclease, RNase A family, 6	AY545655|Rnase6|78416|ribonuclease, RNase A family, 6	BC094892|Rnase6|78416|ribonuclease, RNase A family, 6	AK020595|Rnase6|78416|ribonuclease, RNase A family, 6	BC132632|Rnase6|78416|ribonuclease, RNase A family, 6	BC132634|Rnase6|78416|ribonuclease, RNase A family, 6
mm9_v1_chr6_-_127075853_127076093	4.43731	NKX6-1,2.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr1_+_87423176_87423243	4.39202	NKX6-1,2.p2	AK156961|Csprs|114564|component of Sp100-rs
mm9_v1_chrX_-_27912080_27912140	4.36905	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_26822007_26822067	4.36905	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_27251094_27251154	4.34732	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_28258880_28258940	4.34732	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chr16_+_96689322_96689354	4.34247	NKX6-1,2.p2	
mm9_v1_chrX_+_29483950_29484010	4.3309	NKX6-1,2.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chrX_-_29947647_29947707	4.32832	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_27597810_27597870	4.32832	NKX6-1,2.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_+_32944181_32944241	4.3074	NKX6-1,2.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chrX_+_32607378_32607438	4.3074	NKX6-1,2.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chr8_+_22675857_22675857	4.27309	NKX6-1,2.p2	NM_001177522|Gm14850|100041895|predicted gene 14850
mm9_v1_chr12_+_36719492_36719512	4.23259	NKX6-1,2.p2	AK007677|Agr2|23795|anterior gradient 2 (Xenopus laevis)	BC013334|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AF044262|Agr2|23795|anterior gradient 2 (Xenopus laevis)	NM_011783|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AB016592|Agr2|23795|anterior gradient 2 (Xenopus laevis)
mm9_v1_chr7_-_21838802_21838802	4.18913	NKX6-1,2.p2	NM_001166715|Vmn1r120|435953|vomeronasal 1 receptor 120
mm9_v1_chr17_+_47736273_47736367	4.13736	NKX6-1,2.p2	AK191156|Ccnd3|12445|cyclin D3	AK196525|Ccnd3|12445|cyclin D3	AK196937|Ccnd3|12445|cyclin D3	AK201151|Ccnd3|12445|cyclin D3	AK208250|Ccnd3|12445|cyclin D3	AK209470|Ccnd3|12445|cyclin D3
mm9_v1_chr12_+_33987379_33987464	4.01124	NKX6-1,2.p2	NM_001033436|Atxn7l1|380753|ataxin 7-like 1	AK156016|Atxn7l1|380753|ataxin 7-like 1	BC147479|Atxn7l1|380753|ataxin 7-like 1	BC147483|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr5_-_66000506_66000618	3.97136	NKX6-1,2.p2	AK083707|B230308N11Rik|320060|RIKEN cDNA B230308N11 gene
mm9_v1_chr8_+_22341282_22341282	3.93937	NKX6-1,2.p2	NM_001177486|Gm15293|100041759|predicted gene 15293
mm9_v1_chr7_-_21919146_21919146	3.90989	NKX6-1,2.p2	NM_001166714|Vmn1r122|435951|vomeronasal 1 receptor 122
mm9_v1_chr1_-_53813191_53813277	3.80997	NKX6-1,2.p2	
mm9_v1_chr6_+_41304103_41304177	3.80924	NKX6-1,2.p2	BC138698|Try10|436522|trypsin 10	BC146017|Try10|436522|trypsin 10	NM_001038996|Try10|436522|trypsin 10	AK133516|Try10|436522|trypsin 10
mm9_v1_chr7_+_21657274_21657274	3.68035	NKX6-1,2.p2	NM_001166744|Vmn1r116|667268|vomeronasal 1 receptor 116
mm9_v1_chr6_-_98877291_98877410	3.56994	NKX6-1,2.p2	
mm9_v1_chr4_-_147183894_147183948	3.5495	NKX6-1,2.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr13_-_101086551_101086570	3.52777	NKX6-1,2.p2	BC116347|Naip6|17952|NLR family, apoptosis inhibitory protein 6	BC141346|Naip6|17952|NLR family, apoptosis inhibitory protein 6	AF381772|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_010871|Naip6|17952|NLR family, apoptosis inhibitory protein 6
mm9_v1_chr3_+_69026340_69026379	3.52644	NKX6-1,2.p2	AK018621|Arl14|71619|ADP-ribosylation factor-like 14	NM_027843|Arl14|71619|ADP-ribosylation factor-like 14	BC104368|Arl14|71619|ADP-ribosylation factor-like 14	BC104369|Arl14|71619|ADP-ribosylation factor-like 14
mm9_v1_chr19_-_14672472_14672537	3.52451	NKX6-1,2.p2	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr8_+_22165223_22165266	3.47034	NKX6-1,2.p2	AK008266|Defa21|66298|defensin, alpha, 21	NM_183253|Defa21|66298|defensin, alpha, 21	AY746426|Defa21|66298|defensin, alpha, 21
mm9_v1_chrX_-_75336699_75336712	3.45572	NKX6-1,2.p2	BC125514|Obp1a|18249|odorant binding protein Ia	BC125516|Obp1a|18249|odorant binding protein Ia	AK017455|Obp1a|18249|odorant binding protein Ia	NM_008754|Obp1a|18249|odorant binding protein Ia
mm9_v1_chr7_+_21556203_21556203	3.42213	NKX6-1,2.p2	NM_001166847|Vmn1r112|100043569|vomeronasal 1 receptor 112
mm9_v1_chr7_+_22399110_22399110	3.42213	NKX6-1,2.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_22881885_22881885	3.42213	NKX6-1,2.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_23546715_23546715	3.42213	NKX6-1,2.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr1_+_85196183_85196282	3.39763	NKX6-1,2.p2	AK156961|Csprs|114564|component of Sp100-rs	NM_001081746|Gm7609|665378|predicted pseudogene 7609	X82357|Csprs|114564|component of Sp100-rs	BC059276|Gm7609|665378|predicted pseudogene 7609
mm9_v1_chr7_+_113988126_113988127	3.3938	NKX6-1,2.p2	NM_146596|Olfr703|258589|olfactory receptor 703	BC111815|Olfr703|258589|olfactory receptor 703
mm9_v1_chr12_-_11215753_11215777	3.37857	NKX6-1,2.p2	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr1_+_172238933_172238992	3.36487	NKX6-1,2.p2	AK005990|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC099563|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	NM_001039593|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132313|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132315|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene
mm9_v1_chr8_+_22301955_22301998	3.35887	NKX6-1,2.p2	AK008589|Defa22|382059|defensin, alpha, 22	NM_207658|Defa22|382059|defensin, alpha, 22	AY746427|Defa22|382059|defensin, alpha, 22
mm9_v1_chr7_-_20960758_20960758	3.35329	NKX6-1,2.p2	NM_001166713|Gm5728|435949|predicted gene 5728	NM_001166751|Gm8660|667485|predicted gene 8660
mm9_v1_chr7_-_21161589_21161589	3.34665	NKX6-1,2.p2	NM_001167162|Gm4201|100043061|predicted gene 4201	NM_001167163|Gm4141|100042976|predicted gene 4141
mm9_v1_chr18_+_13165498_13165545	3.33592	NKX6-1,2.p2	AF358859|Hrh4|225192|histamine receptor H4	NM_153087|Hrh4|225192|histamine receptor H4	BC111862|Hrh4|225192|histamine receptor H4	EU660535|Hrh4|225192|histamine receptor H4	EU660534|Hrh4|225192|histamine receptor H4
mm9_v1_chr1_+_61034757_61034802	3.32654	NKX6-1,2.p2	NM_017480|Icos|54167|inducible T-cell co-stimulator	AK030827|Icos|54167|inducible T-cell co-stimulator	AJ250559|Icos|54167|inducible T-cell co-stimulator	BC034852|Icos|54167|inducible T-cell co-stimulator	AB023132|Icos|54167|inducible T-cell co-stimulator	AF257230|Icos|54167|inducible T-cell co-stimulator	AF216748|Icos|54167|inducible T-cell co-stimulator
mm9_v1_chr1_-_185857753_185857876	3.31919	NKX6-1,2.p2	NM_028516|1700056E22Rik|73363|RIKEN cDNA 1700056E22 gene
mm9_v1_chr2_+_90858663_90858815	3.31028	NKX6-1,2.p2	AK080832|Celf1|13046|CUGBP, Elav-like family member 1	AK160135|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr3_+_89586320_89586446	3.26382	NKX6-1,2.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr7_-_23628623_23628623	3.2606	NKX6-1,2.p2	NM_001166758|Vmn1r159|670857|vomeronasal 1 receptor 159
mm9_v1_chr7_-_21630003_21630003	3.25894	NKX6-1,2.p2	NM_001166745|Vmn1r115|667273|vomeronasal 1 receptor 115
mm9_v1_chr10_-_126719287_126719357	3.25276	NKX6-1,2.p2	AK034474|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr9_-_21116749_21116776	3.23289	NKX6-1,2.p2	AF067146|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK010478|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK082674|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_001110300|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_009678|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chrX_+_103320051_103320105	3.22523	NKX6-1,2.p2	AK030847|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK040753|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chrX_-_24352289_24352289	3.22473	NKX6-1,2.p2	BC100411|Gm5935|546282|predicted gene 5935	NM_001081657|Gm5935|546282|predicted gene 5935
mm9_v1_chr17_-_42829185_42829232	3.22373	NKX6-1,2.p2	BC140980|Gpr115|78249|G protein-coupled receptor 115	AK019508|Gpr115|78249|G protein-coupled receptor 115	BC089564|Gpr115|78249|G protein-coupled receptor 115	NM_030067|Gpr115|78249|G protein-coupled receptor 115
mm9_v1_chr7_-_23350361_23350361	3.21758	NKX6-1,2.p2	NM_001167162|Gm4201|100043061|predicted gene 4201	NM_001167163|Gm4141|100042976|predicted gene 4141
mm9_v1_chr14_-_51765134_51765162	3.19579	NKX6-1,2.p2	AK019019|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)
mm9_v1_chr7_-_23156057_23156057	3.17024	NKX6-1,2.p2	NM_001166713|Gm5728|435949|predicted gene 5728	NM_001166751|Gm8660|667485|predicted gene 8660
mm9_v1_chr4_+_140257340_140257464	3.12112	NKX6-1,2.p2	NM_173867|Rcc2|108911|regulator of chromosome condensation 2	BC060624|Rcc2|108911|regulator of chromosome condensation 2	AK076040|Rcc2|108911|regulator of chromosome condensation 2	BC086666|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr7_-_22104879_22104879	3.11871	NKX6-1,2.p2	NM_001166726|Vmn1r127|621561|vomeronasal 1 receptor 127
mm9_v1_chr7_-_20753725_20753725	3.07876	NKX6-1,2.p2	NM_001166723|Vmn1r94|620537|vomeronasal 1 receptor 94	NM_001166749|Vmn1r142|667464|vomeronasal 1 receptor 142
mm9_v1_chr4_+_32504409_32504501	3.06569	NKX6-1,2.p2	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr5_-_87964170_87964216	3.05457	NKX6-1,2.p2	BC024361|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr5_+_93112640_93112650	3.01238	NKX6-1,2.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr17_-_40379205_40379215	2.97552	NKX6-1,2.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr6_-_130287518_130287643	2.97001	NKX6-1,2.p2	U56404|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U56405|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC101952|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103543|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103544|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103545|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132524|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132526|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145192|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145193|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U10305|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	AK159595|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U49868|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	NM_010648|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U09739|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3
mm9_v1_chr6_+_124999976_124999984	2.94528	NKX6-1,2.p2	AK132705|Acrbp|54137|proacrosin binding protein	AK076691|Acrbp|54137|proacrosin binding protein	BC061122|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr7_-_141568510_141568510	2.92383	NKX6-1,2.p2	AK145411|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed	NM_001081331|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed
mm9_v1_chr9_+_107790457_107790481	2.90759	NKX6-1,2.p2	NM_028369|Mon1a|72825|MON1 homolog A (yeast)	BC058717|Mon1a|72825|MON1 homolog A (yeast)
mm9_v1_chr13_-_100972022_100972078	2.86709	NKX6-1,2.p2	AF102871|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135489|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135490|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF381770|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147000|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147001|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_001126182|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_010872|Naip2|17948|NLR family, apoptosis inhibitory protein 2
mm9_v1_chr15_-_79363346_79363346	2.85929	NKX6-1,2.p2	NM_152806|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr7_-_22949053_22949053	2.83772	NKX6-1,2.p2	NM_001166723|Vmn1r94|620537|vomeronasal 1 receptor 94	NM_001166749|Vmn1r142|667464|vomeronasal 1 receptor 142
mm9_v1_chr7_-_16457733_16457733	2.81108	NKX6-1,2.p2	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr7_-_23804941_23804941	2.78456	NKX6-1,2.p2	NM_001167166|Gm4216|100043083|predicted gene 4216	NM_001167167|Gm4177|100043025|predicted gene 4177
mm9_v1_chr7_-_22581746_22581746	2.78456	NKX6-1,2.p2	NM_001167166|Gm4216|100043083|predicted gene 4216	NM_001167167|Gm4177|100043025|predicted gene 4177
mm9_v1_chr7_-_23477335_23477335	2.7803	NKX6-1,2.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr8_+_41760430_41760447	2.72803	NKX6-1,2.p2	AK133199|Adam24|13526|a disintegrin and metallopeptidase domain 24 (testase 1)	AK029528|Adam24|13526|a disintegrin and metallopeptidase domain 24 (testase 1)	NM_010086|Adam24|13526|a disintegrin and metallopeptidase domain 24 (testase 1)
mm9_v1_chr16_+_59148654_59148677	2.72609	NKX6-1,2.p2	BC119110|Olfr195|259000|olfactory receptor 195	NM_146998|Olfr195|259000|olfactory receptor 195
mm9_v1_chr2_-_125971986_125971986	2.72016	NKX6-1,2.p2	NM_029455|4930525F21Rik|75823|RIKEN cDNA 4930525F21 gene
mm9_v1_chr1_+_179659944_179659944	2.69996	NKX6-1,2.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
mm9_v1_chr1_-_65119965_65120107	2.68	NKX6-1,2.p2	M64544|Crygc|12966|crystallin, gamma C	NM_007775|Crygc|12966|crystallin, gamma C	BC056454|Crygc|12966|crystallin, gamma C	EF426301|Crygc|12966|crystallin, gamma C	EF426302|Crygc|12966|crystallin, gamma C	NM_001082573|Crygc|12966|crystallin, gamma C
mm9_v1_chr6_+_124999988_124999992	2.67469	NKX6-1,2.p2	BC114591|Acrbp|54137|proacrosin binding protein	D17573|Acrbp|54137|proacrosin binding protein
mm9_v1_chr9_+_77899730_77899780	2.67171	NKX6-1,2.p2	D88612|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	U59876|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	BC066866|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	NM_008103|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	AK142574|Gcm1|14531|glial cells missing homolog 1 (Drosophila)
mm9_v1_chr7_-_24036700_24036700	2.66881	NKX6-1,2.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr7_-_21488234_21488234	2.66881	NKX6-1,2.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr12_+_119082333_119082371	2.66635	NKX6-1,2.p2	BC006933|Cdca7l|217946|cell division cycle associated 7 like	NM_146040|Cdca7l|217946|cell division cycle associated 7 like	AK149673|Cdca7l|217946|cell division cycle associated 7 like	BC071198|Cdca7l|217946|cell division cycle associated 7 like
mm9_v1_chr4_+_140258090_140258179	2.66384	NKX6-1,2.p2	AK186216|Rcc2|108911|regulator of chromosome condensation 2	AK129370|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr14_-_122314994_122315068	2.63309	NKX6-1,2.p2	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr7_+_23198601_23198601	2.62389	NKX6-1,2.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr7_+_21003290_21003290	2.61665	NKX6-1,2.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr7_+_107325179_107325188	2.60254	NKX6-1,2.p2	NM_001190869|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	AK132773|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3
mm9_v1_chr6_-_87483228_87483252	2.56446	NKX6-1,2.p2	AK169897|Arhgap25|232201|Rho GTPase activating protein 25	NM_001037727|Arhgap25|232201|Rho GTPase activating protein 25	AK159598|Arhgap25|232201|Rho GTPase activating protein 25	AK159941|Arhgap25|232201|Rho GTPase activating protein 25
mm9_v1_chr3_+_19431246_19431246	2.5644	NKX6-1,2.p2	NM_001163537|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
mm9_v1_chr14_-_49282546_49282546	2.56247	NKX6-1,2.p2	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr7_+_29573987_29573995	2.55113	NKX6-1,2.p2	BC044761|Rinl|320435|Ras and Rab interactor-like	BC046530|Rinl|320435|Ras and Rab interactor-like	NM_177158|Rinl|320435|Ras and Rab interactor-like	AK020687|Rinl|320435|Ras and Rab interactor-like	AK030993|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr17_+_29178865_29178883	2.54721	NKX6-1,2.p2	
mm9_v1_chr3_-_144512249_144512265	2.53628	NKX6-1,2.p2	BC058766|Clca4|229927|chloride channel calcium activated 4	AY008277|Clca4|229927|chloride channel calcium activated 4	NM_139148|Clca4|229927|chloride channel calcium activated 4
mm9_v1_chrX_-_109812258_109812267	2.52019	NKX6-1,2.p2	AK036922|Pof1b|69693|premature ovarian failure 1B	AK086511|Pof1b|69693|premature ovarian failure 1B	AK137653|Pof1b|69693|premature ovarian failure 1B	NM_181579|Pof1b|69693|premature ovarian failure 1B
mm9_v1_chr5_-_87061409_87061448	2.51864	NKX6-1,2.p2	AK029032|Tmprss11f|243083|transmembrane protease, serine 11f	AK028587|Tmprss11f|243083|transmembrane protease, serine 11f	AK028447|Tmprss11f|243083|transmembrane protease, serine 11f	AK036957|Tmprss11f|243083|transmembrane protease, serine 11f	NM_178730|Tmprss11f|243083|transmembrane protease, serine 11f
mm9_v1_chr7_+_20550760_20550779	2.51625	NKX6-1,2.p2	AK033581|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	NM_027839|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	AK018613|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	BC049361|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20
mm9_v1_chr3_+_137949734_137949755	2.49201	NKX6-1,2.p2	M22611|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr6_-_115568804_115568831	2.48608	NKX6-1,2.p2	AK189599|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr14_+_27813547_27813547	2.47863	NKX6-1,2.p2	NM_010420|Hesx1|15209|homeobox gene expressed in ES cells	U40720|Hesx1|15209|homeobox gene expressed in ES cells
mm9_v1_chr6_-_3295980_3296101	2.47743	NKX6-1,2.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chr14_-_73762324_73762328	2.47157	NKX6-1,2.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr6_-_129225348_129225390	2.47008	NKX6-1,2.p2	BC139135|Cd69|12515|CD69 antigen	BC139136|Cd69|12515|CD69 antigen	BC106997|Cd69|12515|CD69 antigen	BC128272|Cd69|12515|CD69 antigen	BC128273|Cd69|12515|CD69 antigen	AK017979|Cd69|12515|CD69 antigen	AK151076|Cd69|12515|CD69 antigen	AK153224|Cd69|12515|CD69 antigen	AK171645|Cd69|12515|CD69 antigen	NM_001033122|Cd69|12515|CD69 antigen
mm9_v1_chr10_-_116333934_116333934	2.45932	NKX6-1,2.p2	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr2_+_181501718_181501871	2.45538	NKX6-1,2.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr6_+_124999940_124999944	2.43428	NKX6-1,2.p2	D17574|Acrbp|54137|proacrosin binding protein	NM_001127340|Acrbp|54137|proacrosin binding protein	NM_016845|Acrbp|54137|proacrosin binding protein
mm9_v1_chr11_+_106612525_106612642	2.42427	NKX6-1,2.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr1_-_71461469_71461483	2.4218	NKX6-1,2.p2	AK014713|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK028781|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK029031|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	NM_175210|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12
mm9_v1_chr7_+_21357946_21357946	2.41055	NKX6-1,2.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr8_-_5105158_5105231	2.40065	NKX6-1,2.p2	D87059|Slc10a2|20494|solute carrier family 10, member 2	BC120703|Slc10a2|20494|solute carrier family 10, member 2	BC125290|Slc10a2|20494|solute carrier family 10, member 2	AB002693|Slc10a2|20494|solute carrier family 10, member 2	AY529655|Slc10a2|20494|solute carrier family 10, member 2	AY529656|Slc10a2|20494|solute carrier family 10, member 2	NM_011388|Slc10a2|20494|solute carrier family 10, member 2
mm9_v1_chr13_+_95335701_95335710	2.39749	NKX6-1,2.p2	
mm9_v1_chr11_+_87895626_87895848	2.39383	NKX6-1,2.p2	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr13_-_67433435_67433495	2.37296	NKX6-1,2.p2	BC141018|Zfp595|218314|zinc finger protein 595	AK134150|Zfp595|218314|zinc finger protein 595	AK154058|Zfp595|218314|zinc finger protein 595	AK136304|Zfp595|218314|zinc finger protein 595	AK038563|Zfp595|218314|zinc finger protein 595	NM_177622|Zfp595|218314|zinc finger protein 595
mm9_v1_chr19_-_14672540_14672588	2.37052	NKX6-1,2.p2	AK134989|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	BC086631|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr2_+_151398367_151398403	2.33421	NKX6-1,2.p2	BC005556|Sdcbp2|228765|syndecan binding protein (syntenin) 2	NM_145535|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK144452|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK160483|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK136572|Sdcbp2|228765|syndecan binding protein (syntenin) 2
mm9_v1_chr13_+_9171776_9171813	2.29522	NKX6-1,2.p2	AK148903|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr5_+_93238413_93238466	2.2937	NKX6-1,2.p2	NM_001077595|Shroom3|27428|shroom family member 3	AK164918|Shroom3|27428|shroom family member 3	AF199422|Shroom3|27428|shroom family member 3
mm9_v1_chr16_-_14291427_14291500	2.28914	NKX6-1,2.p2	S81516|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	L25860|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK137226|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	D85923|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	D85924|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK137716|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK085742|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK173045|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	NM_001161775|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	NM_013607|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle
mm9_v1_chr12_+_72456427_72456435	2.28422	NKX6-1,2.p2	
mm9_v1_chr8_-_61390372_61390423	2.28283	NKX6-1,2.p2	BC111102|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	AK080614|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	NM_175032|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm9_v1_chr7_+_21119185_21119185	2.27861	NKX6-1,2.p2	NM_001166738|Vmn1r104|667135|vomeronasal 1 receptor 104	NM_001166752|Vmn1r152|667504|vomeronasal 1 receptor 152
mm9_v1_chr11_-_99982369_99982477	2.24768	NKX6-1,2.p2	AK009677|Krt13|16663|keratin 13	X03492|Krt13|16663|keratin 13
mm9_v1_chr4_-_138469861_138469885	2.24265	NKX6-1,2.p2	NM_028453|Otud3|73162|OTU domain containing 3
mm9_v1_chr7_+_3596861_3596991	2.24034	NKX6-1,2.p2	AK172439|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	NM_146176|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK141718|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK044755|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK031774|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC030332|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr7_-_35833597_35833632	2.23256	NKX6-1,2.p2	AK087103|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr19_-_7877065_7877081	2.22749	NKX6-1,2.p2	AJ132857|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr7_-_21288567_21288567	2.2022	NKX6-1,2.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr8_-_44226818_44226839	2.18042	NKX6-1,2.p2	BC141202|Triml1|244448|tripartite motif family-like 1	BC145531|Triml1|244448|tripartite motif family-like 1	AK077092|Triml1|244448|tripartite motif family-like 1	NM_177742|Triml1|244448|tripartite motif family-like 1
mm9_v1_chr1_-_128727208_128727208	2.16759	NKX6-1,2.p2	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr7_-_22813915_22813915	2.15775	NKX6-1,2.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr3_-_58984006_58984035	2.15745	NKX6-1,2.p2	AF295366|Gpr87|84111|G protein-coupled receptor 87	NM_032399|Gpr87|84111|G protein-coupled receptor 87	BC125653|Gpr87|84111|G protein-coupled receptor 87	BC125655|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr6_-_131197295_131197381	2.13706	NKX6-1,2.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr8_+_22776268_22776268	2.13298	NKX6-1,2.p2	BC134360|Defa4|13238|defensin, alpha, 4	NM_001177528|Gm15315|100041952|predicted gene 15315	NM_010039|Defa4|13238|defensin, alpha, 4
mm9_v1_chr6_-_146902928_146902942	2.12106	NKX6-1,2.p2	AK029686|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK006598|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	BC052362|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK076643|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_001164236|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_028509|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene
mm9_v1_chr8_+_26707480_26707573	2.12102	NKX6-1,2.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr7_-_115210309_115210309	2.11873	NKX6-1,2.p2	NM_020291|Olfr480|56861|olfactory receptor 480
mm9_v1_chr5_+_111269020_111269035	2.10846	NKX6-1,2.p2	BC056617|Chek2|50883|CHK2 checkpoint homolog (S. pombe)	AK044913|Chek2|50883|CHK2 checkpoint homolog (S. pombe)	NM_016681|Chek2|50883|CHK2 checkpoint homolog (S. pombe)
mm9_v1_chr17_-_51951378_51951378	2.09478	NKX6-1,2.p2	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr11_+_83251195_83251208	2.09138	NKX6-1,2.p2	AK006174|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	NM_025492|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	AK005809|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	BC152320|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene
mm9_v1_chr17_-_40345499_40345553	2.08401	NKX6-1,2.p2	M18654|Pgk2|18663|phosphoglycerate kinase 2	BC052343|Pgk2|18663|phosphoglycerate kinase 2	AK015016|Pgk2|18663|phosphoglycerate kinase 2	AK133436|Pgk2|18663|phosphoglycerate kinase 2	BC061054|Pgk2|18663|phosphoglycerate kinase 2	NM_031190|Pgk2|18663|phosphoglycerate kinase 2
mm9_v1_chr1_-_109174947_109174947	2.0599	NKX6-1,2.p2	AK003650|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C	NM_201363|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C
mm9_v1_chr19_-_34240392_34240542	2.05703	NKX6-1,2.p2	BC003460|Ankrd22|52024|ankyrin repeat domain 22	AK017408|Ankrd22|52024|ankyrin repeat domain 22	AK037242|Ankrd22|52024|ankyrin repeat domain 22	AK017360|Ankrd22|52024|ankyrin repeat domain 22	NM_024204|Ankrd22|52024|ankyrin repeat domain 22	AK012869|Ankrd22|52024|ankyrin repeat domain 22
mm9_v1_chr15_-_78893275_78893359	2.05537	NKX6-1,2.p2	BC014743|Ankrd54|223690|ankyrin repeat domain 54	NM_144849|Ankrd54|223690|ankyrin repeat domain 54	DQ884878|Ankrd54|223690|ankyrin repeat domain 54	AK133785|Ankrd54|223690|ankyrin repeat domain 54	AK050440|Ankrd54|223690|ankyrin repeat domain 54	AK143625|Ankrd54|223690|ankyrin repeat domain 54	AK084500|Ankrd54|223690|ankyrin repeat domain 54
mm9_v1_chr5_+_120121480_120121522	2.04933	NKX6-1,2.p2	AK157247|Tbx3|21386|T-box 3	AK172118|Tbx3|21386|T-box 3
mm9_v1_chr6_-_72309822_72309877	2.04559	NKX6-1,2.p2	
mm9_v1_chr3_-_154718282_154718370	2.02146	NKX6-1,2.p2	AK052882|Tnni3k|435766|TNNI3 interacting kinase	BC139368|Tnni3k|435766|TNNI3 interacting kinase	BC139394|Tnni3k|435766|TNNI3 interacting kinase	AK084817|Tnni3k|435766|TNNI3 interacting kinase	AY526095|Tnni3k|435766|TNNI3 interacting kinase	AY526096|Tnni3k|435766|TNNI3 interacting kinase	NM_177066|Tnni3k|435766|TNNI3 interacting kinase
mm9_v1_chr2_-_129134865_129134894	2.01857	NKX6-1,2.p2	BC003727|Il1a|16175|interleukin 1 alpha
mm9_v1_chr11_+_42963378_42963378	2.01715	NKX6-1,2.p2	AK033531|Atp10b|319767|ATPase, class V, type 10B	NM_176999|Atp10b|319767|ATPase, class V, type 10B
mm9_v1_chr1_-_65097587_65097736	2.01671	NKX6-1,2.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr7_+_130605807_130605885	2.01181	NKX6-1,2.p2	NM_001109045|Aqp8|11833|aquaporin 8	NM_007474|Aqp8|11833|aquaporin 8	AF018952|Aqp8|11833|aquaporin 8	BC010982|Aqp8|11833|aquaporin 8
mm9_v1_chr11_+_104953532_104953539	1.998	NKX6-1,2.p2	NM_001081046|Efcab3|70894|EF-hand calcium binding domain 3	BC050801|Efcab3|70894|EF-hand calcium binding domain 3	AK014861|Efcab3|70894|EF-hand calcium binding domain 3
mm9_v1_chr5_-_73033990_73033990	1.98369	NKX6-1,2.p2	NM_007723|Cnga1|12788|cyclic nucleotide gated channel alpha 1
mm9_v1_chr2_+_79547936_79548278	1.97858	NKX6-1,2.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr16_-_75909440_75909580	1.96615	NKX6-1,2.p2	AK041340|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AF222928|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK041566|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK053946|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC052906|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC064778|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	DQ333189|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	NM_023380|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1
mm9_v1_chr6_+_67846144_67846176	1.96204	NKX6-1,2.p2	
mm9_v1_chr7_-_21697365_21697365	1.93531	NKX6-1,2.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr7_-_20819176_20819176	1.93342	NKX6-1,2.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr18_+_85104396_85104433	1.93094	NKX6-1,2.p2	AK082809|Fbxo15|50764|F-box protein 15	AK163224|Fbxo15|50764|F-box protein 15	AK166591|Fbxo15|50764|F-box protein 15	AK166599|Fbxo15|50764|F-box protein 15	AK167118|Fbxo15|50764|F-box protein 15	NM_015798|Fbxo15|50764|F-box protein 15	AK167270|Fbxo15|50764|F-box protein 15	AK166918|Fbxo15|50764|F-box protein 15	AF176530|Fbxo15|50764|F-box protein 15
mm9_v1_chr9_-_105999021_105999113	1.92634	NKX6-1,2.p2	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr5_+_66254807_66254997	1.92556	NKX6-1,2.p2	NM_001081105|Rhoh|74734|ras homolog gene family, member H	AK017885|Rhoh|74734|ras homolog gene family, member H	AK169618|Rhoh|74734|ras homolog gene family, member H
mm9_v1_chr1_+_89470601_89470620	1.92219	NKX6-1,2.p2	AK145284|Neu2|23956|neuraminidase 2	NM_001160163|Neu2|23956|neuraminidase 2	NM_001160164|Neu2|23956|neuraminidase 2	FJ613504|Neu2|23956|neuraminidase 2
mm9_v1_chr17_+_87762817_87762839	1.9136	NKX6-1,2.p2	BC057906|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr6_+_136467388_136467391	1.89271	NKX6-1,2.p2	BC060246|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr6_+_129528268_129528303	1.88927	NKX6-1,2.p2	BC145177|Klre1|243655|killer cell lectin-like receptor family E member 1	AF306663|Klre1|243655|killer cell lectin-like receptor family E member 1	NM_153590|Klre1|243655|killer cell lectin-like receptor family E member 1
mm9_v1_chr7_-_4349321_4349345	1.87906	NKX6-1,2.p2	AK079424|Gp6|243816|glycoprotein 6 (platelet)	BC138170|Gp6|243816|glycoprotein 6 (platelet)	BC145172|Gp6|243816|glycoprotein 6 (platelet)	NM_001163014|Gp6|243816|glycoprotein 6 (platelet)
mm9_v1_chr6_+_86578225_86578230	1.8788	NKX6-1,2.p2	AK160494|Asprv1|67855|aspartic peptidase, retroviral-like 1
mm9_v1_chr19_-_28057437_28057437	1.8672	NKX6-1,2.p2	NM_001166414|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chr18_-_61874531_61874583	1.8628	NKX6-1,2.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr5_-_94499570_94499570	1.85607	NKX6-1,2.p2	BC061212|BC061212|381724|cDNA sequence BC061212	NM_198667|BC061212|381724|cDNA sequence BC061212
mm9_v1_chr5_-_96165191_96165191	1.85574	NKX6-1,2.p2	BC061212|BC061212|381724|cDNA sequence BC061212	NM_198667|BC061212|381724|cDNA sequence BC061212
mm9_v1_chr2_+_80193710_80193811	1.84422	NKX6-1,2.p2	
mm9_v1_chr11_+_62692976_62693095	1.84119	NKX6-1,2.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr4_+_150302107_150302108	1.83706	NKX6-1,2.p2	NM_001077509|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK154625|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr7_-_23014502_23014502	1.83027	NKX6-1,2.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr1_-_84741605_84741713	1.82808	NKX6-1,2.p2	BC004085|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr11_+_87430665_87430665	1.81473	NKX6-1,2.p2	NM_001045527|Hsf5|327992|heat shock transcription factor family member 5
mm9_v1_chr5_-_87967164_87967219	1.79653	NKX6-1,2.p2	U92076|Sult1b1|56362|sulfotransferase family 1B, member 1	AK033498|Sult1b1|56362|sulfotransferase family 1B, member 1	NM_019878|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr4_+_89885510_89885510	1.79227	NKX6-1,2.p2	AF290196|Zfp352|236537|zinc finger protein 352	NM_153102|Zfp352|236537|zinc finger protein 352
mm9_v1_chr6_-_99216494_99216530	1.79088	NKX6-1,2.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr2_-_125450836_125450859	1.7846	NKX6-1,2.p2	AK041913|Cep152|99100|centrosomal protein 152	AK173060|Cep152|99100|centrosomal protein 152	NM_001081091|Cep152|99100|centrosomal protein 152
mm9_v1_chrX_+_160578411_160578593	1.77748	NKX6-1,2.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr5_+_93112460_93112460	1.77643	NKX6-1,2.p2	AF199421|Shroom3|27428|shroom family member 3	NM_015756|Shroom3|27428|shroom family member 3
mm9_v1_chr8_-_22995888_22995905	1.7703	NKX6-1,2.p2	BC109177|Defb9|246079|defensin beta 9	AJ437647|Defb9|246079|defensin beta 9	NM_139219|Defb9|246079|defensin beta 9
mm9_v1_chr15_-_81238649_81238728	1.76814	NKX6-1,2.p2	BC104396|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC104397|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC119478|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC048738|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AB028855|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	NM_021317|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AK006201|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AK077186|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7
mm9_v1_chr11_+_98725073_98725122	1.76652	NKX6-1,2.p2	BC057854|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chrX_+_6645338_6645368	1.75712	NKX6-1,2.p2	NM_001042542|Akap4|11643|A kinase (PRKA) anchor protein 4	U07423|Akap4|11643|A kinase (PRKA) anchor protein 4
mm9_v1_chr2_-_72931338_72931457	1.75001	NKX6-1,2.p2	
mm9_v1_chr10_+_28388165_28388438	1.72957	NKX6-1,2.p2	AK041386|Themis|210757|thymocyte selection associated	AK088136|Themis|210757|thymocyte selection associated	AK089077|Themis|210757|thymocyte selection associated	NM_178666|Themis|210757|thymocyte selection associated	AK040594|Themis|210757|thymocyte selection associated	AK041622|Themis|210757|thymocyte selection associated	AK138701|Themis|210757|thymocyte selection associated	AK041562|Themis|210757|thymocyte selection associated	BC125486|Themis|210757|thymocyte selection associated	BC125488|Themis|210757|thymocyte selection associated	AB509340|Themis|210757|thymocyte selection associated	AK169558|Themis|210757|thymocyte selection associated
mm9_v1_chr8_-_23016871_23016903	1.72254	NKX6-1,2.p2	BC099849|Defb11|246081|defensin beta 11	AJ437646|Defb11|246081|defensin beta 11	NM_139221|Defb11|246081|defensin beta 11
mm9_v1_chr1_-_39608739_39608803	1.72015	NKX6-1,2.p2	AK020327|Rnf149|67702|ring finger protein 149
mm9_v1_chr6_-_57340560_57340659	1.7158	NKX6-1,2.p2	NM_134181|Vmn1r18|171199|vomeronasal 1 receptor 18	BC132061|Vmn1r18|171199|vomeronasal 1 receptor 18	BC138409|Vmn1r18|171199|vomeronasal 1 receptor 18
mm9_v1_chr11_-_77538789_77538794	1.68718	NKX6-1,2.p2	AJ239052|Cryba1|12957|crystallin, beta A1	BC107342|Cryba1|12957|crystallin, beta A1	NM_009965|Cryba1|12957|crystallin, beta A1
mm9_v1_chr2_-_155771090_155771102	1.6861	NKX6-1,2.p2	BC034546|Gdf5|14563|growth differentiation factor 5	NM_008109|Gdf5|14563|growth differentiation factor 5	U08337|Gdf5|14563|growth differentiation factor 5
mm9_v1_chr8_-_63433528_63433596	1.67812	NKX6-1,2.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr13_-_99660903_99660996	1.67797	NKX6-1,2.p2	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr4_+_136166351_136166390	1.66454	NKX6-1,2.p2	AK016074|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	NM_026300|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	BC048442|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	AK015053|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene
mm9_v1_chr19_-_34673889_34673923	1.66069	NKX6-1,2.p2	NM_001110517|Gm14446|667373|predicted gene 14446
mm9_v1_chr8_+_23069185_23069185	1.65468	NKX6-1,2.p2	AK135805|C86695|97476|expressed sequence C86695	NM_001081662|C86695|97476|expressed sequence C86695
mm9_v1_chr3_-_74947644_74947693	1.64023	NKX6-1,2.p2	BC050789|Zbbx|213234|zinc finger, B-box domain containing	BC100435|Zbbx|213234|zinc finger, B-box domain containing	NM_172515|Zbbx|213234|zinc finger, B-box domain containing	AK029899|Zbbx|213234|zinc finger, B-box domain containing	AK133102|Zbbx|213234|zinc finger, B-box domain containing
mm9_v1_chr10_-_60561763_60561769	1.63203	NKX6-1,2.p2	
mm9_v1_chr10_+_79283765_79283787	1.62794	NKX6-1,2.p2	AK020266|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene	NM_030218|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene	BC013508|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene
mm9_v1_chr3_-_107135939_107136206	1.62542	NKX6-1,2.p2	BC080828|Rbm15|229700|RNA binding motif protein 15	AK048987|Rbm15|229700|RNA binding motif protein 15	BC051409|Rbm15|229700|RNA binding motif protein 15	AK168242|Rbm15|229700|RNA binding motif protein 15	AK166271|Rbm15|229700|RNA binding motif protein 15	BC057038|Rbm15|229700|RNA binding motif protein 15	AK220162|Rbm15|229700|RNA binding motif protein 15	AK168936|Rbm15|229700|RNA binding motif protein 15	BC120590|Rbm15|229700|RNA binding motif protein 15	BC137741|Rbm15|229700|RNA binding motif protein 15	NM_001045807|Rbm15|229700|RNA binding motif protein 15
mm9_v1_chr3_-_88258754_88258795	1.62181	NKX6-1,2.p2	AK035918|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr6_-_102414660_102414660	1.61878	NKX6-1,2.p2	NM_008779|Cntn3|18488|contactin 3
mm9_v1_chr3_+_97734095_97734095	1.6099	NKX6-1,2.p2	AK142329|Gm5544|433632|predicted gene 5544	NM_001033779|Gm5544|433632|predicted gene 5544
mm9_v1_chr8_-_44613490_44613490	1.60832	NKX6-1,2.p2	AK015931|Adam26b|382007|a disintegrin and metallopeptidase domain 26B	NM_001009547|Adam26b|382007|a disintegrin and metallopeptidase domain 26B
mm9_v1_chr6_+_134961629_134961652	1.60731	NKX6-1,2.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr3_-_86352170_86352368	1.60072	NKX6-1,2.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr19_+_54003803_54003809	1.59979	NKX6-1,2.p2	AK050175|Pdcd4|18569|programmed cell death 4
mm9_v1_chr6_+_136467315_136467378	1.59187	NKX6-1,2.p2	AK082697|Atf7ip|54343|activating transcription factor 7 interacting protein	AK167542|Atf7ip|54343|activating transcription factor 7 interacting protein	BC048827|Atf7ip|54343|activating transcription factor 7 interacting protein	AK134252|Atf7ip|54343|activating transcription factor 7 interacting protein	BC052460|Atf7ip|54343|activating transcription factor 7 interacting protein	NM_019426|Atf7ip|54343|activating transcription factor 7 interacting protein	AJ132702|Atf7ip|54343|activating transcription factor 7 interacting protein	BC022714|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr11_-_94644016_94644016	1.58904	NKX6-1,2.p2	AK139848|Tmem92-ps|544806|transmembrane protein 92, pseudogene	NM_001034896|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr1_-_58026858_58026927	1.56858	NKX6-1,2.p2	AK032658|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK132699|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK053098|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK079700|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_001159864|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_001159865|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_030211|Kctd18|51960|potassium channel tetramerisation domain containing 18
mm9_v1_chr8_+_23348971_23348971	1.55672	NKX6-1,2.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr1_-_65128840_65128863	1.54568	NKX6-1,2.p2	BC056455|Crygb|12965|crystallin, gamma B	NM_144761|Crygb|12965|crystallin, gamma B	EF426303|Crygb|12965|crystallin, gamma B	AK143110|Crygb|12965|crystallin, gamma B
mm9_v1_chr6_-_3349470_3349570	1.52835	NKX6-1,2.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr1_+_43502537_43502605	1.52464	NKX6-1,2.p2	AK051665|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	NM_010879|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	AK014949|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chr8_+_74066795_74066869	1.52385	NKX6-1,2.p2	BC020119|Fam125a|73711|family with sequence similarity 125, member A	NM_028617|Fam125a|73711|family with sequence similarity 125, member A	BC087734|Fam125a|73711|family with sequence similarity 125, member A	AK003644|Fam125a|73711|family with sequence similarity 125, member A	BC027419|Fam125a|73711|family with sequence similarity 125, member A
mm9_v1_chr8_+_126547293_126547372	1.51226	NKX6-1,2.p2	BC151125|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	NM_001029876|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr17_+_35998262_35998322	1.51004	NKX6-1,2.p2	BC021750|Nrm|106582|nurim (nuclear envelope membrane protein)	NM_134122|Nrm|106582|nurim (nuclear envelope membrane protein)	BC026576|Nrm|106582|nurim (nuclear envelope membrane protein)
mm9_v1_chr11_-_115794529_115794818	1.50694	NKX6-1,2.p2	BC066176|Recql5|170472|RecQ protein-like 5	BC053086|Recql5|170472|RecQ protein-like 5	BC060070|Recql5|170472|RecQ protein-like 5	BC059000|Recql5|170472|RecQ protein-like 5	AK029060|Recql5|170472|RecQ protein-like 5	AK083513|Recql5|170472|RecQ protein-like 5
mm9_v1_chr14_-_52393218_52393266	1.5049	NKX6-1,2.p2	BC132444|Ang4|219033|angiogenin, ribonuclease A family, member 4	BC132448|Ang4|219033|angiogenin, ribonuclease A family, member 4	AK136415|Ang4|219033|angiogenin, ribonuclease A family, member 4	AK165799|Ang4|219033|angiogenin, ribonuclease A family, member 4	AY219870|Ang4|219033|angiogenin, ribonuclease A family, member 4	NM_177544|Ang4|219033|angiogenin, ribonuclease A family, member 4
mm9_v1_chr15_+_96199877_96199934	1.50442	NKX6-1,2.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr11_-_17847399_17847495	1.48658	NKX6-1,2.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr6_-_136730254_136730285	1.46772	NKX6-1,2.p2	BC099968|Gucy2c|14917|guanylate cyclase 2c	NM_001127318|Gucy2c|14917|guanylate cyclase 2c	NM_145067|Gucy2c|14917|guanylate cyclase 2c	AK136496|Gucy2c|14917|guanylate cyclase 2c
mm9_v1_chr2_+_127164374_127164374	1.45962	NKX6-1,2.p2	AK033037|Astl|215095|astacin-like metalloendopeptidase (M12 family)	NM_172539|Astl|215095|astacin-like metalloendopeptidase (M12 family)
mm9_v1_chr3_+_94641479_94641499	1.45461	NKX6-1,2.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr15_-_101403190_101403258	1.44413	NKX6-1,2.p2	AF343088|Krt75|109052|keratin 75
mm9_v1_chr13_-_38069696_38069810	1.44192	NKX6-1,2.p2	
mm9_v1_chr11_+_108543922_108543950	1.43522	NKX6-1,2.p2	NM_145688|Ccdc46|76380|coiled-coil domain containing 46	AK005611|Ccdc46|76380|coiled-coil domain containing 46	NM_029586|Ccdc46|76380|coiled-coil domain containing 46	AK006504|Ccdc46|76380|coiled-coil domain containing 46	BC048677|Ccdc46|76380|coiled-coil domain containing 46
mm9_v1_chr5_+_104599721_104599730	1.43084	NKX6-1,2.p2	U67916|Dspp|666279|dentin sialophosphoprotein	BC116172|Dspp|666279|dentin sialophosphoprotein	BC116173|Dspp|666279|dentin sialophosphoprotein	BC129802|Dspp|666279|dentin sialophosphoprotein	NM_010080|Dspp|666279|dentin sialophosphoprotein
mm9_v1_chr19_-_7877136_7877156	1.42745	NKX6-1,2.p2	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr17_-_44951745_44951745	1.42511	NKX6-1,2.p2	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr3_-_153568808_153569101	1.42167	NKX6-1,2.p2	AF178957|Msh4|55993|mutS homolog 4 (E. coli)	AK161474|Msh4|55993|mutS homolog 4 (E. coli)	BC138163|Msh4|55993|mutS homolog 4 (E. coli)	BC145838|Msh4|55993|mutS homolog 4 (E. coli)	AY351585|Msh4|55993|mutS homolog 4 (E. coli)	AF298655|Msh4|55993|mutS homolog 4 (E. coli)	NM_031870|Msh4|55993|mutS homolog 4 (E. coli)
mm9_v1_chr9_+_35024031_35024058	1.4214	NKX6-1,2.p2	AK219602|Srpr|67398|signal recognition particle receptor ('docking protein')
mm9_v1_chr11_-_101828286_101828333	1.40476	NKX6-1,2.p2	AF326740|Sost|74499|sclerostin	BC137832|Sost|74499|sclerostin	BC137833|Sost|74499|sclerostin	AK017295|Sost|74499|sclerostin	AK041382|Sost|74499|sclerostin	NM_024449|Sost|74499|sclerostin
mm9_v1_chr6_-_129187965_129188001	1.40002	NKX6-1,2.p2	AK030376|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene	AK009064|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene
mm9_v1_chr8_+_42416046_42416071	1.4	NKX6-1,2.p2	AK040482|Pcm1|18536|pericentriolar material 1
mm9_v1_chr19_+_8876985_8877044	1.3814	NKX6-1,2.p2	AK142256|Zbtb3|75291|zinc finger and BTB domain containing 3	NM_133759|Zbtb3|75291|zinc finger and BTB domain containing 3	AK049258|Zbtb3|75291|zinc finger and BTB domain containing 3	BC119186|Zbtb3|75291|zinc finger and BTB domain containing 3	BC119188|Zbtb3|75291|zinc finger and BTB domain containing 3	NM_001098237|Zbtb3|75291|zinc finger and BTB domain containing 3	BC012410|Zbtb3|75291|zinc finger and BTB domain containing 3
mm9_v1_chr6_-_40981647_40981696	1.3748	NKX6-1,2.p2	AK007775|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene
mm9_v1_chr7_+_22296798_22296798	1.36479	NKX6-1,2.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr6_+_54839147_54839273	1.35612	NKX6-1,2.p2	AK078666|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr7_+_21947203_21947203	1.35509	NKX6-1,2.p2	NM_001166707|Vmn1r123|384695|vomeronasal 1 receptor 123
mm9_v1_chr11_+_98724908_98724950	1.34713	NKX6-1,2.p2	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr1_+_87546558_87546676	1.33867	NKX6-1,2.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr4_+_155387803_155387982	1.33106	NKX6-1,2.p2	NM_011659|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139239|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139266|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC065782|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	Z21674|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4
mm9_v1_chr9_-_85637765_85637765	1.33016	NKX6-1,2.p2	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr19_-_5468482_5468500	1.3271	NKX6-1,2.p2	AF014941|Ctsw|13041|cathepsin W	BC019136|Ctsw|13041|cathepsin W	AK088375|Ctsw|13041|cathepsin W	NM_009985|Ctsw|13041|cathepsin W	AK163626|Ctsw|13041|cathepsin W
mm9_v1_chr6_-_58385838_58385887	1.3247	NKX6-1,2.p2	NM_134177|Vmn1r30|171195|vomeronasal 1 receptor 30	BC138075|Vmn1r30|171195|vomeronasal 1 receptor 30	BC138078|Vmn1r30|171195|vomeronasal 1 receptor 30
mm9_v1_chr5_-_87335956_87335985	1.3239	NKX6-1,2.p2	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr5_-_86539474_86539529	1.32026	NKX6-1,2.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr9_-_43951401_43951528	1.31991	NKX6-1,2.p2	
mm9_v1_chr10_+_129759907_129759934	1.31118	NKX6-1,2.p2	NM_183264|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene	AK038220|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene	AK039795|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene	AK163027|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene	AK156313|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene	AK040038|5830405N20Rik|67596|RIKEN cDNA 5830405N20 gene
mm9_v1_chr12_-_88605193_88605194	1.29879	NKX6-1,2.p2	NM_134044|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	BC023716|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr17_+_29178771_29178812	1.28899	NKX6-1,2.p2	
mm9_v1_chr5_+_86500770_86500862	1.28804	NKX6-1,2.p2	AK162655|Stap1|56792|signal transducing adaptor family member 1	AK153661|Stap1|56792|signal transducing adaptor family member 1	BC057898|Stap1|56792|signal transducing adaptor family member 1	AK042475|Stap1|56792|signal transducing adaptor family member 1	BC145550|Stap1|56792|signal transducing adaptor family member 1	BC145828|Stap1|56792|signal transducing adaptor family member 1	BC145830|Stap1|56792|signal transducing adaptor family member 1	AK041474|Stap1|56792|signal transducing adaptor family member 1	NM_019992|Stap1|56792|signal transducing adaptor family member 1	AB036058|Stap1|56792|signal transducing adaptor family member 1
mm9_v1_chr8_-_8666771_8666782	1.28713	NKX6-1,2.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr15_-_58220798_58220828	1.28148	NKX6-1,2.p2	BC013521|Anxa13|69787|annexin A13	AJ306451|Anxa13|69787|annexin A13	NM_027211|Anxa13|69787|annexin A13
mm9_v1_chr14_-_118450875_118451546	1.27503	NKX6-1,2.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr16_-_21153958_21154072	1.27159	NKX6-1,2.p2	AK009367|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009777|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009766|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009984|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115655|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115656|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009496|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009632|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009635|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK010016|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009997|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009566|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	NM_025634|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009751|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene
mm9_v1_chr11_-_17853850_17853896	1.26951	NKX6-1,2.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr7_+_23307985_23307985	1.26554	NKX6-1,2.p2	NM_001166738|Vmn1r104|667135|vomeronasal 1 receptor 104	NM_001166752|Vmn1r152|667504|vomeronasal 1 receptor 152
mm9_v1_chr6_+_58257261_58257290	1.26475	NKX6-1,2.p2	BC150722|Vmn1r29|113859|vomeronasal 1 receptor 29	NM_053232|Vmn1r29|113859|vomeronasal 1 receptor 29
mm9_v1_chr6_+_24683244_24683306	1.26426	NKX6-1,2.p2	AK016575|Hyal6|74409|hyaluronoglucosaminidase 6	AK030190|Hyal6|74409|hyaluronoglucosaminidase 6	NM_028920|Hyal6|74409|hyaluronoglucosaminidase 6	AK029715|Hyal6|74409|hyaluronoglucosaminidase 6	BC151178|Hyal6|74409|hyaluronoglucosaminidase 6	BC151179|Hyal6|74409|hyaluronoglucosaminidase 6
mm9_v1_chr1_-_89283173_89283296	1.25635	NKX6-1,2.p2	
mm9_v1_chr7_+_5996762_5996870	1.2561	NKX6-1,2.p2	AK133284|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AY596194|Nlrp4c|83564|NLR family, pyrin domain containing 4C	NM_031389|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166817|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166869|Nlrp4c|83564|NLR family, pyrin domain containing 4C
mm9_v1_chr7_+_22057197_22057197	1.2545	NKX6-1,2.p2	NM_001166740|Vmn1r125|667215|vomeronasal 1 receptor 125
mm9_v1_chr15_-_63640293_63640293	1.2469	NKX6-1,2.p2	AK137662|Gsdmc|83492|gasdermin C	NM_031378|Gsdmc|83492|gasdermin C
mm9_v1_chr1_-_175157322_175157359	1.24136	NKX6-1,2.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr7_+_23840558_23840558	1.23982	NKX6-1,2.p2	NM_001166747|Vmn1r135|667404|vomeronasal 1 receptor 135	NM_001166755|Vmn1r163|667586|vomeronasal 1 receptor 163
mm9_v1_chr16_-_55843956_55843970	1.23925	NKX6-1,2.p2	AK034283|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr2_-_25095376_25095416	1.23846	NKX6-1,2.p2	AK003658|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	AK009095|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	BC117777|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	BC117778|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	NM_026415|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene
mm9_v1_chr11_+_87032504_87032509	1.23449	NKX6-1,2.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr11_-_98862163_98862321	1.23395	NKX6-1,2.p2	AK138079|Top2a|21973|topoisomerase (DNA) II alpha	BC094326|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr7_+_16633755_16633793	1.22642	NKX6-1,2.p2	AK008102|2010004M13Rik|76511|RIKEN cDNA 2010004M13 gene
mm9_v1_chr4_+_128688217_128688363	1.21522	NKX6-1,2.p2	
mm9_v1_chr1_+_175350728_175350734	1.2142	NKX6-1,2.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr11_+_62692956_62692968	1.19741	NKX6-1,2.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr10_+_100055019_100055050	1.19604	NKX6-1,2.p2	NM_001081246|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK014917|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK006074|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene
mm9_v1_chr4_+_146237770_146237770	1.19109	NKX6-1,2.p2	NM_027285|1700029I01Rik|70005|RIKEN cDNA 1700029I01 gene
mm9_v1_chr5_-_92792262_92792321	1.1896	NKX6-1,2.p2	AK040051|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	BC025903|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF136449|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF178672|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF179872|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	NM_019494|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AK020750|Cxcl11|56066|chemokine (C-X-C motif) ligand 11
mm9_v1_chr2_-_103104559_103104567	1.18684	NKX6-1,2.p2	BC012652|Ehf|13661|ets homologous factor
mm9_v1_chr13_-_67585160_67585193	1.18679	NKX6-1,2.p2	AK137581|Zfp874b|408067|zinc finger protein 874b	NM_001076791|Zfp874b|408067|zinc finger protein 874b	AK079330|Zfp874b|408067|zinc finger protein 874b
mm9_v1_chrX_+_88577028_88577243	1.18506	NKX6-1,2.p2	BC145851|Mageb2|17146|melanoma antigen, family B, 2	NM_010759|Mageb1|17145|melanoma antigen, family B, 1	BC119227|Mageb2|17146|melanoma antigen, family B, 2	AY196960|Mageb2|17146|melanoma antigen, family B, 2	NM_031171|Mageb2|17146|melanoma antigen, family B, 2
mm9_v1_chr6_+_53523365_53523387	1.18033	NKX6-1,2.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr14_+_3224445_3224445	1.17671	NKX6-1,2.p2	AK085928|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene	NM_177135|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene
mm9_v1_chr15_-_77591830_77592015	1.175	NKX6-1,2.p2	M88754|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK087164|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC026521|Myh9|17886|myosin, heavy polypeptide 9, non-muscle
mm9_v1_chr19_-_11239795_11239809	1.17289	NKX6-1,2.p2	BC048529|1700025F22Rik|69416|RIKEN cDNA 1700025F22 gene	BC061241|1700025F22Rik|69416|RIKEN cDNA 1700025F22 gene	AK006335|1700025F22Rik|69416|RIKEN cDNA 1700025F22 gene	NM_027074|1700025F22Rik|69416|RIKEN cDNA 1700025F22 gene
mm9_v1_chr15_-_74686747_74686747	1.17102	NKX6-1,2.p2	BC116908|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	BC119321|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	NM_009991|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2
mm9_v1_chr7_+_27542160_27542205	1.16819	NKX6-1,2.p2	BC137965|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	BC137966|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AK029227|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AF047529|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	NM_007814|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19
mm9_v1_chr6_-_72382855_72382865	1.16723	NKX6-1,2.p2	
mm9_v1_chr18_+_61799306_61799327	1.16712	NKX6-1,2.p2	AK143260|LOC545261|545261|hypothetical protein LOC545261
mm9_v1_chr5_+_151325197_151325232	1.164	NKX6-1,2.p2	AK148272|Brca2|12190|breast cancer 2	NM_009765|Brca2|12190|breast cancer 2	AK087379|Brca2|12190|breast cancer 2	NM_001081001|Brca2|12190|breast cancer 2	AK164598|Brca2|12190|breast cancer 2	U65594|Brca2|12190|breast cancer 2	AK145017|Brca2|12190|breast cancer 2
mm9_v1_chr6_-_41264706_41264793	1.16119	NKX6-1,2.p2	AK007843|Try5|103964|trypsin 5	AK131898|Try5|103964|trypsin 5	AK160484|Try5|103964|trypsin 5	AB009661|Try5|103964|trypsin 5	NM_001003405|Try5|103964|trypsin 5	BC139220|Try5|103964|trypsin 5	BC139223|Try5|103964|trypsin 5
mm9_v1_chr6_-_85854877_85854931	1.16005	NKX6-1,2.p2	BC029200|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene	NM_029331|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene
mm9_v1_chr5_+_88805132_88805132	1.15643	NKX6-1,2.p2	AK017352|Amtn|71421|amelotin	NM_027793|Amtn|71421|amelotin
mm9_v1_chr3_-_10183884_10183884	1.15429	NKX6-1,2.p2	BC099520|Pmp2|18857|peripheral myelin protein 2	NM_001030305|Pmp2|18857|peripheral myelin protein 2
mm9_v1_chr16_-_16829386_16829548	1.15423	NKX6-1,2.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr5_-_94735787_94735820	1.15397	NKX6-1,2.p2	BC147369|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene	AK040373|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene	NM_177913|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene
mm9_v1_chr8_+_22274328_22274385	1.14616	NKX6-1,2.p2	NM_001177485|Gm15284|100038927|predicted gene 15284	AJ564869|Defa-rs2|13222|defensin, alpha, related sequence 2
mm9_v1_chr7_+_21254266_21254266	1.14529	NKX6-1,2.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_21453935_21453935	1.14529	NKX6-1,2.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_23443036_23443036	1.14529	NKX6-1,2.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_52877180_52877296	1.1452	NKX6-1,2.p2	AB195681|Izumo1|73456|izumo sperm-egg fusion 1	AK006830|Izumo1|73456|izumo sperm-egg fusion 1	NM_001018013|Izumo1|73456|izumo sperm-egg fusion 1	BC139270|Izumo1|73456|izumo sperm-egg fusion 1
mm9_v1_chr7_+_22617369_22617369	1.14471	NKX6-1,2.p2	NM_001166747|Vmn1r135|667404|vomeronasal 1 receptor 135	NM_001166755|Vmn1r163|667586|vomeronasal 1 receptor 163
mm9_v1_chr6_+_18816317_18816373	1.14375	NKX6-1,2.p2	BC049731|Ankrd7|75196|ankyrin repeat domain 7	NM_001167757|Ankrd7|75196|ankyrin repeat domain 7	NM_029202|Ankrd7|75196|ankyrin repeat domain 7	AK077080|Ankrd7|75196|ankyrin repeat domain 7	AK015948|Ankrd7|75196|ankyrin repeat domain 7
mm9_v1_chr11_-_120924851_120924882	1.14301	NKX6-1,2.p2	AK007321|Sectm1b|58210|secreted and transmembrane 1B	BC010805|Sectm1b|58210|secreted and transmembrane 1B	AK143807|Sectm1b|58210|secreted and transmembrane 1B	AK029082|Sectm1b|58210|secreted and transmembrane 1B	NM_026907|Sectm1b|58210|secreted and transmembrane 1B
mm9_v1_chr7_+_20779058_20779058	1.14146	NKX6-1,2.p2	NM_001166750|Vmn1r143|667469|vomeronasal 1 receptor 143	NM_001167538|Vmn1r95|100312475|vomeronasal 1 receptor, 95
mm9_v1_chr6_-_129572590_129572688	1.14127	NKX6-1,2.p2	AY860972|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	CT010384|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AF039026|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	BC057147|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK040436|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_033078|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr7_+_24002350_24002350	1.14123	NKX6-1,2.p2	BC154405|Vmn1r178|232959|vomeronasal 1 receptor 178	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_22779605_22779605	1.14123	NKX6-1,2.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_22974395_22974395	1.14005	NKX6-1,2.p2	NM_001166750|Vmn1r143|667469|vomeronasal 1 receptor 143	NM_001167538|Vmn1r95|100312475|vomeronasal 1 receptor, 95
mm9_v1_chr17_-_87827021_87827080	1.13939	NKX6-1,2.p2	AK005861|1700011E24Rik|75467|RIKEN cDNA 1700011E24 gene	NM_029298|1700011E24Rik|75467|RIKEN cDNA 1700011E24 gene
mm9_v1_chr5_-_95384342_95384375	1.1383	NKX6-1,2.p2	BC147369|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene	AK040373|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene	NM_177913|A430089I19Rik|331195|RIKEN cDNA A430089I19 gene
mm9_v1_chr2_+_24008680_24008706	1.13795	NKX6-1,2.p2	AK009787|Il1f8|69677|interleukin 1 family, member 8	BC119517|Il1f8|69677|interleukin 1 family, member 8	NM_027163|Il1f8|69677|interleukin 1 family, member 8	AY071842|Il1f8|69677|interleukin 1 family, member 8
mm9_v1_chr15_-_82979687_82979804	1.13596	NKX6-1,2.p2	BC046505|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK167552|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK081139|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	BC037652|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK150130|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK052722|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	BC058225|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK083924|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	NM_178627|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK087446|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK220221|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3	AK152060|Poldip3|73826|polymerase (DNA-directed), delta interacting protein 3
mm9_v1_chr11_+_26287083_26287211	1.12914	NKX6-1,2.p2	AF513619|Fancl|67030|Fanconi anemia, complementation group L	NM_025923|Fancl|67030|Fanconi anemia, complementation group L	AK011520|Fancl|67030|Fanconi anemia, complementation group L	AK168538|Fancl|67030|Fanconi anemia, complementation group L	AK008605|Fancl|67030|Fanconi anemia, complementation group L	AK011903|Fancl|67030|Fanconi anemia, complementation group L	AK017431|Fancl|67030|Fanconi anemia, complementation group L	AK020981|Fancl|67030|Fanconi anemia, complementation group L	AK076017|Fancl|67030|Fanconi anemia, complementation group L	AK018018|Fancl|67030|Fanconi anemia, complementation group L	AK011752|Fancl|67030|Fanconi anemia, complementation group L	BC032876|Fancl|67030|Fanconi anemia, complementation group L
mm9_v1_chr16_+_36885096_36885119	1.12868	NKX6-1,2.p2	NM_030035|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC145221|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC150731|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr14_-_45344661_45344661	1.12759	NKX6-1,2.p2	NM_001162954|Gm8267|666744|predicted gene 8267
mm9_v1_chr4_+_146506201_146506201	1.12371	NKX6-1,2.p2	BC024323|Gm13139|666532|predicted gene 13139	NM_001083918|Gm13139|666532|predicted gene 13139
mm9_v1_chr19_+_11566527_11566537	1.12355	NKX6-1,2.p2	NM_001164202|Gm8369|666926|predicted gene 8369
mm9_v1_chr4_-_154010868_154010981	1.12304	NKX6-1,2.p2	AB078338|Prdm16|70673|PR domain containing 16	AK083829|Prdm16|70673|PR domain containing 16	BC053082|Prdm16|70673|PR domain containing 16	BC059838|Prdm16|70673|PR domain containing 16	NM_001177995|Prdm16|70673|PR domain containing 16	NM_027504|Prdm16|70673|PR domain containing 16
mm9_v1_chr11_-_94154354_94154488	1.12188	NKX6-1,2.p2	BC055921|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chr11_+_20443315_20443422	1.11634	NKX6-1,2.p2	AB041541|Sertad2|58172|SERTA domain containing 2	BC014726|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr13_+_54203236_54203344	1.11468	NKX6-1,2.p2	AK048238|Sfxn1|14057|sideroflexin 1
mm9_v1_chr6_+_137703029_137703138	1.10939	NKX6-1,2.p2	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr6_-_130079852_130079915	1.10721	NKX6-1,2.p2	AK143236|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	NM_010650|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	AY338977|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AY338978|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116399|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116400|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AF288380|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_053151|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_001101620|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8
mm9_v1_chr3_+_87975676_87975677	1.10272	NKX6-1,2.p2	
mm9_v1_chr12_-_88784769_88784966	1.10149	NKX6-1,2.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr6_-_82724366_82724447	1.10089	NKX6-1,2.p2	BC054472|Hk2|15277|hexokinase 2	AJ238540|Hk2|15277|hexokinase 2	AK019092|Hk2|15277|hexokinase 2	AK145936|Hk2|15277|hexokinase 2	AK009328|Hk2|15277|hexokinase 2	NM_013820|Hk2|15277|hexokinase 2
mm9_v1_chrX_+_104284572_104284678	1.09974	NKX6-1,2.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr6_+_48597232_48597434	1.09744	NKX6-1,2.p2	AK134199|Gimap8|243374|GTPase, IMAP family member 8	NM_001077410|Gimap8|243374|GTPase, IMAP family member 8	AB178029|Gimap8|243374|GTPase, IMAP family member 8	AK155985|Gimap8|243374|GTPase, IMAP family member 8	NM_212486|Gimap8|243374|GTPase, IMAP family member 8	BC137943|Gimap8|243374|GTPase, IMAP family member 8	BC137944|Gimap8|243374|GTPase, IMAP family member 8	AJ617674|Gimap8|243374|GTPase, IMAP family member 8
mm9_v1_chr3_-_113061599_113061616	1.09639	NKX6-1,2.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5
mm9_v1_chr6_-_115712483_115712483	1.09347	NKX6-1,2.p2	NM_001168256|Tmem40|94346|transmembrane protein 40	NM_001168257|Tmem40|94346|transmembrane protein 40
mm9_v1_chr8_-_44662019_44662060	1.08941	NKX6-1,2.p2	AF167404|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	AK015043|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	AK029756|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)	NM_010085|Adam26a|13525|a disintegrin and metallopeptidase domain 26A (testase 3)
mm9_v1_chr16_-_57292963_57292977	1.08635	NKX6-1,2.p2	AK161475|Tmem30c|71027|transmembrane protein 30C	NM_027651|Tmem30c|71027|transmembrane protein 30C	AK016747|Tmem30c|71027|transmembrane protein 30C	AK016597|Tmem30c|71027|transmembrane protein 30C
mm9_v1_chr10_+_45297632_45297737	1.08237	NKX6-1,2.p2	NM_172473|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK156958|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK042879|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120695|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120697|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm9_v1_chr11_-_59601120_59601161	1.07651	NKX6-1,2.p2	AK077214|Pld6|194908|phospholipase D family, member 6	AK139586|Pld6|194908|phospholipase D family, member 6	BC119245|Pld6|194908|phospholipase D family, member 6	BC145052|Pld6|194908|phospholipase D family, member 6	NM_183139|Pld6|194908|phospholipase D family, member 6
mm9_v1_chr10_+_87663839_87663973	1.07391	NKX6-1,2.p2	AK013835|Ccdc53|67282|coiled-coil domain containing 53	AK158822|Ccdc53|67282|coiled-coil domain containing 53	NM_001122960|Ccdc53|67282|coiled-coil domain containing 53	NM_026070|Ccdc53|67282|coiled-coil domain containing 53	NM_027487|Ccdc53|67282|coiled-coil domain containing 53	AK017732|Ccdc53|67282|coiled-coil domain containing 53	AK004206|Ccdc53|67282|coiled-coil domain containing 53	AK028599|Ccdc53|67282|coiled-coil domain containing 53	AK009358|Ccdc53|67282|coiled-coil domain containing 53	BC029256|Ccdc53|67282|coiled-coil domain containing 53
mm9_v1_chr7_+_24416996_24417006	1.07166	NKX6-1,2.p2	AF324871|Vmn1r171|81012|vomeronasal 1 receptor 171	BC111911|Vmn1r171|81012|vomeronasal 1 receptor 171	NM_030737|Vmn1r171|81012|vomeronasal 1 receptor 171
mm9_v1_chr10_-_14438019_14438019	1.06661	NKX6-1,2.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr8_-_46380114_46380132	1.06651	NKX6-1,2.p2	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr11_+_58234612_58234640	1.06502	NKX6-1,2.p2	NM_027239|1810065E05Rik|69864|RIKEN cDNA 1810065E05 gene	BC026941|1810065E05Rik|69864|RIKEN cDNA 1810065E05 gene
mm9_v1_chr12_-_70576533_70576536	1.06436	NKX6-1,2.p2	AK039829|5830428M24Rik|76062|RIKEN cDNA 5830428M24 gene	AK017954|5830428M24Rik|76062|RIKEN cDNA 5830428M24 gene
mm9_v1_chr2_-_79969429_79969614	1.05309	NKX6-1,2.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr1_-_53353810_53353878	1.04711	NKX6-1,2.p2	AK045010|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	BC028939|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	NM_153556|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	AK140689|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)
mm9_v1_chr7_+_147433182_147433279	1.04157	NKX6-1,2.p2	AK030813|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	AK040624|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_175533|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	BC139294|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624462|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128146|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624463|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128145|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene
mm9_v1_chr1_-_173957407_173957430	1.03881	NKX6-1,2.p2	AK049613|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AK046036|Vangl2|93840|vang-like 2 (van gogh, Drosophila)
mm9_v1_chr14_+_69647294_69647485	1.03844	NKX6-1,2.p2	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr1_-_37592976_37593103	1.03446	NKX6-1,2.p2	AB053217|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	AK163327|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	AK082702|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A	NM_173870|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm9_v1_chr5_+_16981913_16981939	1.03438	NKX6-1,2.p2	BC116901|Speer4f|70935|spermatogenesis associated glutamate (E)-rich protein 4f	BC116903|Speer4f|70935|spermatogenesis associated glutamate (E)-rich protein 4f	AK015022|Speer4f|70935|spermatogenesis associated glutamate (E)-rich protein 4f	NM_027609|Speer4f|70935|spermatogenesis associated glutamate (E)-rich protein 4f
mm9_v1_chr3_-_112959644_112959644	1.02899	NKX6-1,2.p2	NM_001190403|Amy2b|545562|amylase 2b	NM_001190404|Amy2b|545562|amylase 2b
mm9_v1_chr7_-_142720274_142720338	1.02826	NKX6-1,2.p2	AK085267|Clrn3|212070|clarin 3	AK033715|Clrn3|212070|clarin 3	BC036176|Clrn3|212070|clarin 3	AK146608|Clrn3|212070|clarin 3	NM_178669|Clrn3|212070|clarin 3
mm9_v1_chr15_+_58731646_58731691	1.02468	NKX6-1,2.p2	AK016137|Rnf139|75841|ring finger protein 139
mm9_v1_chr1_+_185858324_185858355	1.0235	NKX6-1,2.p2	BC025066|Dusp10|63953|dual specificity phosphatase 10	AB037908|Dusp10|63953|dual specificity phosphatase 10	AK142568|Dusp10|63953|dual specificity phosphatase 10	AK088186|Dusp10|63953|dual specificity phosphatase 10	NM_022019|Dusp10|63953|dual specificity phosphatase 10	AK035293|Dusp10|63953|dual specificity phosphatase 10	AK050528|Dusp10|63953|dual specificity phosphatase 10	AK088357|Dusp10|63953|dual specificity phosphatase 10	AK088024|Dusp10|63953|dual specificity phosphatase 10	AK011995|Dusp10|63953|dual specificity phosphatase 10
mm9_v1_chr1_+_154622471_154622540	1.02064	NKX6-1,2.p2	
mm9_v1_chr16_-_88962877_88963117	1.01794	NKX6-1,2.p2	AF345296|Krtap16-6|170655|keratin associated protein 16-6	BC107303|Krtap16-10|71369|keratin associated protein 16-10	BC107304|Krtap16-10|71369|keratin associated protein 16-10	BC119504|Krtap16-10|71369|keratin associated protein 16-10	BC127231|Krtap16-10|71369|keratin associated protein 16-10	BC127232|Krtap16-10|71369|keratin associated protein 16-10	BC132658|Krtap16-10|71369|keratin associated protein 16-10	BC132660|Krtap16-10|71369|keratin associated protein 16-10	AK017265|Krtap16-10|71369|keratin associated protein 16-10	NM_183296|Krtap16-10|71369|keratin associated protein 16-10
mm9_v1_chr6_-_3444484_3444497	1.01755	NKX6-1,2.p2	BC096374|Hepacam2|101202|HEPACAM family member 2	AK033728|Hepacam2|101202|HEPACAM family member 2	AK050501|Hepacam2|101202|HEPACAM family member 2	NM_178899|Hepacam2|101202|HEPACAM family member 2
mm9_v1_chr6_-_30865541_30865572	1.01745	NKX6-1,2.p2	AF294348|Tsga13|116732|testis specific gene A13	AK006265|Tsga13|116732|testis specific gene A13	NM_054073|Tsga13|116732|testis specific gene A13
mm9_v1_chr8_-_46380165_46380188	1.01421	NKX6-1,2.p2	NM_008455|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr9_+_108417075_108417146	0.99041	NKX6-1,2.p2	BC018274|Qars|97541|glutaminyl-tRNA synthetase	AK189247|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr1_+_164569335_164569367	0.988449	NKX6-1,2.p2	BC125329|Myoc|17926|myocilin	BC137606|Myoc|17926|myocilin
mm9_v1_chr9_+_114976396_114976396	0.987959	NKX6-1,2.p2	BC027256|Osbpl10|74486|oxysterol binding protein-like 10	NM_148958|Osbpl10|74486|oxysterol binding protein-like 10
mm9_v1_chr7_-_111656285_111656372	0.986694	NKX6-1,2.p2	AF220015|Trim30a|20128|tripartite motif-containing 30A	BC056631|Trim30d|209387|tripartite motif-containing 30D	AK164938|Trim30d|209387|tripartite motif-containing 30D	AK136456|Trim30d|209387|tripartite motif-containing 30D	NM_001167828|Trim30d|209387|tripartite motif-containing 30D	NM_199146|Trim30d|209387|tripartite motif-containing 30D
mm9_v1_chr1_+_46123582_46123582	0.984309	NKX6-1,2.p2	NM_001160386|Dnahc7b|227058|dynein, axonemal, heavy chain 7B
mm9_v1_chr11_+_102254949_102254989	0.982209	NKX6-1,2.p2	U73941|Rundc3a|51799|RUN domain containing 3A
mm9_v1_chr5_-_121357467_121357543	0.977413	NKX6-1,2.p2	BC057878|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	AK149613|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	BC013715|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	M33863|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	X04958|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	NM_145211|Oas1a|246730|2'-5' oligoadenylate synthetase 1A
mm9_v1_chr15_-_72929166_72929248	0.971583	NKX6-1,2.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr11_+_59355080_59355087	0.968615	NKX6-1,2.p2	AF486632|Nlrp3|216799|NLR family, pyrin domain containing 3
mm9_v1_chr9_+_50924105_50924222	0.967923	NKX6-1,2.p2	AB050983|Btg4|56057|B-cell translocation gene 4	AK136149|Btg4|56057|B-cell translocation gene 4	AK136185|Btg4|56057|B-cell translocation gene 4	NM_019493|Btg4|56057|B-cell translocation gene 4	AK136041|Btg4|56057|B-cell translocation gene 4	AK136124|Btg4|56057|B-cell translocation gene 4	AK162122|Btg4|56057|B-cell translocation gene 4	AK163407|Btg4|56057|B-cell translocation gene 4	BC066811|Btg4|56057|B-cell translocation gene 4	AJ005120|Btg4|56057|B-cell translocation gene 4
mm9_v1_chr7_-_21597204_21597204	0.967033	NKX6-1,2.p2	NM_001166837|Vmn1r114|100042996|vomeronasal 1 receptor 114
mm9_v1_chr9_+_91263809_91263809	0.963235	NKX6-1,2.p2	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr6_-_135068260_135068300	0.959122	NKX6-1,2.p2	BC119192|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	BC119194|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AK137739|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AF218809|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	NM_053118|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D
mm9_v1_chr6_+_34362333_34362371	0.958937	NKX6-1,2.p2	AK147775|Akr1b7|11997|aldo-keto reductase family 1, member B7	NM_009731|Akr1b7|11997|aldo-keto reductase family 1, member B7	AK002705|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr7_+_20686506_20686506	0.956225	NKX6-1,2.p2	NM_001166736|Vmn1r91|667067|vomeronasal 1 receptor 91
mm9_v1_chr10_+_128143313_128143342	0.95616	NKX6-1,2.p2	AK012808|Pmel|20431|premelanosome protein	AK131956|Pmel|20431|premelanosome protein	NM_021882|Pmel|20431|premelanosome protein	BC075667|Pmel|20431|premelanosome protein	BC082555|Pmel|20431|premelanosome protein	U14133|Pmel|20431|premelanosome protein
mm9_v1_chr3_+_95697820_95698061	0.956144	NKX6-1,2.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr2_-_87814819_87814819	0.954109	NKX6-1,2.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr7_-_55237665_55237665	0.949594	NKX6-1,2.p2	AY042194|Mrgpra4|235854|MAS-related GPR, member A4	NM_153524|Mrgpra4|235854|MAS-related GPR, member A4
mm9_v1_chr15_+_99800504_99800504	0.948068	NKX6-1,2.p2	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr5_-_51945054_51945159	0.947895	NKX6-1,2.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr10_+_111520409_111520427	0.947093	NKX6-1,2.p2	AK014846|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK161292|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	BC118017|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	NM_026223|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK015834|Glipr1l2|67537|GLI pathogenesis-related 1 like 2
mm9_v1_chr16_+_49911557_49911575	0.946397	NKX6-1,2.p2	AK164165|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	AK021021|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr5_+_120121292_120121326	0.939178	NKX6-1,2.p2	AK145436|Tbx3|21386|T-box 3
mm9_v1_chr6_+_67966702_67966735	0.934584	NKX6-1,2.p2	
mm9_v1_chr1_-_138856866_138857085	0.934242	NKX6-1,2.p2	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr7_+_77510266_77510283	0.932584	NKX6-1,2.p2	AK045070|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr1_-_158330120_158330120	0.932359	NKX6-1,2.p2	AK134071|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene	NM_001198597|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene
mm9_v1_chr10_+_33577526_33577529	0.93081	NKX6-1,2.p2	AF026075|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125593|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125595|Sult3a1|57430|sulfotransferase family 3A, member 1	NM_020565|Sult3a1|57430|sulfotransferase family 3A, member 1
mm9_v1_chr7_-_22331108_22331108	0.930142	NKX6-1,2.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr1_+_166205728_166205836	0.926876	NKX6-1,2.p2	BC060044|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	NM_029115|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK076640|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK149168|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK015464|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	BC048086|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene
mm9_v1_chr1_+_90203286_90203286	0.925847	NKX6-1,2.p2	BC117934|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8	NM_134252|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8
mm9_v1_chrX_-_89261521_89261736	0.914851	NKX6-1,2.p2	AY196960|Mageb2|17146|melanoma antigen, family B, 2	NM_031171|Mageb2|17146|melanoma antigen, family B, 2	BC119227|Mageb2|17146|melanoma antigen, family B, 2	NM_010759|Mageb1|17145|melanoma antigen, family B, 1	BC145851|Mageb2|17146|melanoma antigen, family B, 2
mm9_v1_chr14_-_44749035_44749035	0.912093	NKX6-1,2.p2	AK015686|4930503E14Rik|74954|RIKEN cDNA 4930503E14 gene	NM_029131|4930503E14Rik|74954|RIKEN cDNA 4930503E14 gene
mm9_v1_chr4_+_140723459_140723541	0.902697	NKX6-1,2.p2	AK020135|Fbxo42|213499|F-box protein 42
mm9_v1_chr18_+_37514924_37514931	0.894136	NKX6-1,2.p2	AY013790|Pcdhb8|93879|protocadherin beta 8	BC116268|Pcdhb8|93879|protocadherin beta 8	BC127160|Pcdhb8|93879|protocadherin beta 8	NM_053133|Pcdhb8|93879|protocadherin beta 8	BC116269|Pcdhb8|93879|protocadherin beta 8
mm9_v1_chr6_-_138028436_138028436	0.893	NKX6-1,2.p2	NM_177787|Slc15a5|277898|solute carrier family 15, member 5
mm9_v1_chr2_+_11093936_11094008	0.892246	NKX6-1,2.p2	AK037664|Prkcq|18761|protein kinase C, theta	D11091|Prkcq|18761|protein kinase C, theta	NM_008859|Prkcq|18761|protein kinase C, theta
mm9_v1_chr6_+_34362388_34362389	0.88733	NKX6-1,2.p2	BC086929|Akr1b7|11997|aldo-keto reductase family 1, member B7	J05663|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chrX_+_130593711_130593811	0.884082	NKX6-1,2.p2	AK049971|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	AK032817|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	AF317552|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616680|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616681|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616682|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	BC036719|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2
mm9_v1_chr5_+_88408469_88408475	0.883891	NKX6-1,2.p2	AK016441|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	AK076636|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	BC049750|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	NM_027631|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene
mm9_v1_chr10_+_42580317_42580598	0.882538	NKX6-1,2.p2	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr9_-_96371668_96371747	0.87636	NKX6-1,2.p2	AK208401|Rnf7|19823|ring finger protein 7
mm9_v1_chr9_+_45127182_45127182	0.875496	NKX6-1,2.p2	BC085323|Tmprss13|214531|transmembrane protease, serine 13	NM_001013373|Tmprss13|214531|transmembrane protease, serine 13
mm9_v1_chr6_+_57531124_57531158	0.873717	NKX6-1,2.p2	AK017888|Herc6|67138|hect domain and RLD 6
mm9_v1_chr4_+_147433130_147433233	0.873568	NKX6-1,2.p2	AK191706|Mthfr|17769|5,10-methylenetetrahydrofolate reductase
mm9_v1_chr3_+_87329497_87329593	0.86315	NKX6-1,2.p2	NM_001083318|Etv3|27049|ets variant gene 3	NM_012051|Etv3|27049|ets variant gene 3	AF218539|Etv3|27049|ets variant gene 3	AK147552|Etv3|27049|ets variant gene 3	AK163509|Etv3|27049|ets variant gene 3	AK155080|Etv3|27049|ets variant gene 3	AK089640|Etv3|27049|ets variant gene 3	AK156824|Etv3|27049|ets variant gene 3	AK155957|Etv3|27049|ets variant gene 3	BC078636|Etv3|27049|ets variant gene 3	BC057151|Etv3|27049|ets variant gene 3
mm9_v1_chr11_+_43495499_43495538	0.862818	NKX6-1,2.p2	NM_001164231|Pwwp2a|70802|PWWP domain containing 2A	NM_027557|Pwwp2a|70802|PWWP domain containing 2A	AK173305|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chrX_+_157205944_157206093	0.861362	NKX6-1,2.p2	BC046422|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	NM_011302|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF084561|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF073780|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AJ011381|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)
mm9_v1_chr2_-_74497475_74497613	0.853514	NKX6-1,2.p2	M93128|Evx2|14029|even skipped homeotic gene 2 homolog	NM_007967|Evx2|14029|even skipped homeotic gene 2 homolog	BC061467|Evx2|14029|even skipped homeotic gene 2 homolog
mm9_v1_chr4_-_116358626_116358644	0.848032	NKX6-1,2.p2	AK131819|AV051173|100502959|expressed sequence AV051173
mm9_v1_chrX_+_97170927_97171053	0.847688	NKX6-1,2.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr10_+_32803288_32803366	0.846567	NKX6-1,2.p2	NM_029726|Trdn|76757|triadin	AK009816|Trdn|76757|triadin	AF223415|Trdn|76757|triadin	AF223416|Trdn|76757|triadin	BC034343|Trdn|76757|triadin	AF223417|Trdn|76757|triadin
mm9_v1_chrX_+_104871850_104871850	0.845008	NKX6-1,2.p2	AK084312|Tbx22|245572|T-box 22	NM_145224|Tbx22|245572|T-box 22
mm9_v1_chr12_+_103793130_103793206	0.843018	NKX6-1,2.p2	M64278|Chga|12652|chromogranin A	NM_007693|Chga|12652|chromogranin A	AK144504|Chga|12652|chromogranin A	BC026554|Chga|12652|chromogranin A
mm9_v1_chr2_+_85815369_85815369	0.842026	NKX6-1,2.p2	BC150841|Olfr1029|258154|olfactory receptor 1029	NM_001011852|Olfr1029|258154|olfactory receptor 1029
mm9_v1_chr17_+_19499098_19499098	0.840514	NKX6-1,2.p2	NM_001104551|Vmn2r99|665376|vomeronasal 2, receptor 99
mm9_v1_chr3_+_51299646_51299685	0.83925	NKX6-1,2.p2	
mm9_v1_chr19_-_11735008_11735048	0.838617	NKX6-1,2.p2	BC099498|Plac1l|225922|placenta-specific 1-like	AK143411|Plac1l|225922|placenta-specific 1-like	NM_001037634|Plac1l|225922|placenta-specific 1-like
mm9_v1_chr2_-_32942666_32942723	0.834561	NKX6-1,2.p2	BC132143|Garnl3|99326|GTPase activating RANGAP domain-like 3	AK034068|Garnl3|99326|GTPase activating RANGAP domain-like 3	NM_178888|Garnl3|99326|GTPase activating RANGAP domain-like 3
mm9_v1_chr6_+_134874663_134874674	0.83278	NKX6-1,2.p2	AK154276|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK169586|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chrX_+_160577312_160577325	0.832161	NKX6-1,2.p2	EF408739|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	EF408740|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr3_-_37024751_37024880	0.825621	NKX6-1,2.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr10_-_24555898_24556005	0.825606	NKX6-1,2.p2	AY630402|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC117533|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC118512|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC006944|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_134005|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK132256|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3
mm9_v1_chr10_+_62562532_62562550	0.823761	NKX6-1,2.p2	BC092234|Atoh7|53404|atonal homolog 7 (Drosophila)
mm9_v1_chr19_+_58803376_58803466	0.817155	NKX6-1,2.p2	AF061274|Pnliprp1|18946|pancreatic lipase related protein 1	NM_018874|Pnliprp1|18946|pancreatic lipase related protein 1	AK028105|Pnliprp1|18946|pancreatic lipase related protein 1	BC090985|Pnliprp1|18946|pancreatic lipase related protein 1
mm9_v1_chr3_+_103718042_103718073	0.811672	NKX6-1,2.p2	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr8_-_64601861_64601991	0.808411	NKX6-1,2.p2	BC125319|Anxa10|26359|annexin A10	BC132207|Anxa10|26359|annexin A10	AJ238978|Anxa10|26359|annexin A10	AK168715|Anxa10|26359|annexin A10	NM_001136089|Anxa10|26359|annexin A10	AK131880|Anxa10|26359|annexin A10	AK008772|Anxa10|26359|annexin A10	AK008808|Anxa10|26359|annexin A10	AK020288|Anxa10|26359|annexin A10	NM_011922|Anxa10|26359|annexin A10	AK018597|Anxa10|26359|annexin A10	AK008930|Anxa10|26359|annexin A10
mm9_v1_chr12_+_80309899_80309933	0.80082	NKX6-1,2.p2	AK164157|Rdh12|77974|retinol dehydrogenase 12	AK039233|Rdh12|77974|retinol dehydrogenase 12	NM_030017|Rdh12|77974|retinol dehydrogenase 12	AK020927|Rdh12|77974|retinol dehydrogenase 12	BC016204|Rdh12|77974|retinol dehydrogenase 12	BC067213|Rdh12|77974|retinol dehydrogenase 12
mm9_v1_chr13_-_97804287_97804316	0.800019	NKX6-1,2.p2	AK006488|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	BC049576|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	AK006036|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_001080777|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_025585|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene
mm9_v1_chr6_-_24118065_24118091	0.798221	NKX6-1,2.p2	BC040789|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	BC049981|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK019876|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199365|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199366|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK128899|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_019481|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1
mm9_v1_chr1_-_135557934_135557977	0.797992	NKX6-1,2.p2	AK148376|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK078105|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK145740|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK167700|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK041148|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK017663|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK035705|Zbed6|667118|zinc finger, BED domain containing 6	NM_144530|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr14_+_96280472_96280516	0.796379	NKX6-1,2.p2	BC049573|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK014987|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	NM_025733|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK005846|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene
mm9_v1_chr17_-_33783578_33783579	0.79374	NKX6-1,2.p2	AK150477|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr16_+_36277233_36277264	0.791107	NKX6-1,2.p2	NM_001082543|Stfa1|20861|stefin A1	M92417|Stfa1|20861|stefin A1
mm9_v1_chr3_+_30645214_30645214	0.787745	NKX6-1,2.p2	AK044227|Samd7|75953|sterile alpha motif domain containing 7	NM_029489|Samd7|75953|sterile alpha motif domain containing 7
mm9_v1_chr14_-_111154292_111154370	0.787271	NKX6-1,2.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr1_-_173465366_173465415	0.785439	NKX6-1,2.p2	BC150795|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157363|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157364|Itln1|16429|intelectin 1 (galactofuranose binding)	AY619693|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chr1_+_74438182_74438368	0.784125	NKX6-1,2.p2	NM_153088|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AK089478|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC049184|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC058085|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr2_-_68309996_68310080	0.781497	NKX6-1,2.p2	AK017292|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AF099988|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	BC064443|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	NM_016866|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AK148456|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr1_-_180259089_180259120	0.780387	NKX6-1,2.p2	AK049600|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr1_-_173465423_173465424	0.778098	NKX6-1,2.p2	AB016496|Itln1|16429|intelectin 1 (galactofuranose binding)	NM_010584|Itln1|16429|intelectin 1 (galactofuranose binding)	AK007447|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chr10_-_116782524_116782604	0.777415	NKX6-1,2.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr10_+_101621712_101621712	0.774229	NKX6-1,2.p2	AK032009|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_001162369|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr6_-_115542515_115542614	0.769645	NKX6-1,2.p2	AK028760|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	AK011120|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	NM_001101431|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene
mm9_v1_chr2_+_152495196_152495240	0.768224	NKX6-1,2.p2	NM_001159551|H13|14950|histocompatibility 13	NM_001159552|H13|14950|histocompatibility 13	NM_001159553|H13|14950|histocompatibility 13	NM_010376|H13|14950|histocompatibility 13	AJ345032|H13|14950|histocompatibility 13	BC056977|H13|14950|histocompatibility 13	DQ168449|H13|14950|histocompatibility 13	AK012600|H13|14950|histocompatibility 13	AK007664|H13|14950|histocompatibility 13	AK004690|H13|14950|histocompatibility 13	AK019877|H13|14950|histocompatibility 13	AK039008|H13|14950|histocompatibility 13	AK049101|H13|14950|histocompatibility 13	AK159176|H13|14950|histocompatibility 13	AK028109|H13|14950|histocompatibility 13	AF483214|H13|14950|histocompatibility 13	AK080966|H13|14950|histocompatibility 13	AK169922|H13|14950|histocompatibility 13
mm9_v1_chr3_+_133902563_133902608	0.763865	NKX6-1,2.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr7_-_88837850_88837850	0.76331	NKX6-1,2.p2	NM_001164087|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr8_+_61390551_61390637	0.760966	NKX6-1,2.p2	BC030500|BC030500|234290|cDNA sequence BC030500	NM_173411|BC030500|234290|cDNA sequence BC030500
mm9_v1_chr3_-_41546402_41546435	0.7597	NKX6-1,2.p2	BC043136|Sclt1|67161|sodium channel and clathrin linker 1	BC060271|Sclt1|67161|sodium channel and clathrin linker 1	AK083894|Sclt1|67161|sodium channel and clathrin linker 1	AK016469|Sclt1|67161|sodium channel and clathrin linker 1	NM_001081411|Sclt1|67161|sodium channel and clathrin linker 1
mm9_v1_chr18_+_35750406_35750586	0.757285	NKX6-1,2.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr13_+_105077914_105078054	0.752566	NKX6-1,2.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr16_-_36367622_36367655	0.744615	NKX6-1,2.p2	AY169235|BC117090|100038854|cDNA sequence BC1179090	BC117064|BC117090|100038854|cDNA sequence BC1179090	BC117090|BC117090|100038854|cDNA sequence BC1179090	NM_001082546|BC100530|100034684|cDNA sequence BC100530
mm9_v1_chrY_-_1976583_1976583	0.743165	NKX6-1,2.p2	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr16_-_79091336_79091341	0.740362	NKX6-1,2.p2	NM_008941|Tmprss15|19146|transmembrane protease, serine 15	U73378|Tmprss15|19146|transmembrane protease, serine 15	BC117917|Tmprss15|19146|transmembrane protease, serine 15	BC117918|Tmprss15|19146|transmembrane protease, serine 15	AK033582|Tmprss15|19146|transmembrane protease, serine 15	NM_178855|Tmprss15|19146|transmembrane protease, serine 15
mm9_v1_chr6_+_126803115_126803190	0.738451	NKX6-1,2.p2	NM_009650|Akap3|11642|A kinase (PRKA) anchor protein 3	BC100458|Akap3|11642|A kinase (PRKA) anchor protein 3	AF093406|Akap3|11642|A kinase (PRKA) anchor protein 3
mm9_v1_chrX_+_160577257_160577273	0.73401	NKX6-1,2.p2	NM_001130513|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr11_-_116332384_116332670	0.732211	NKX6-1,2.p2	AK217597|Prpsap1|67763|phosphoribosyl pyrophosphate synthetase-associated protein 1	AK217106|Prpsap1|67763|phosphoribosyl pyrophosphate synthetase-associated protein 1	AK193081|Prpsap1|67763|phosphoribosyl pyrophosphate synthetase-associated protein 1	AK182083|Prpsap1|67763|phosphoribosyl pyrophosphate synthetase-associated protein 1
mm9_v1_chr12_+_120084801_120084801	0.731416	NKX6-1,2.p2	AK053093|Sp8|320145|trans-acting transcription factor 8	NM_177082|Sp8|320145|trans-acting transcription factor 8
mm9_v1_chr13_-_46788898_46788932	0.730774	NKX6-1,2.p2	
mm9_v1_chr9_-_107581922_107581964	0.728863	NKX6-1,2.p2	BC022793|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	NM_008140|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC051412|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC058810|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	AK149254|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1
mm9_v1_chr4_+_33149973_33150101	0.727531	NKX6-1,2.p2	AF024621|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	NM_008076|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	BC057957|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm9_v1_chr4_-_43713678_43713678	0.726085	NKX6-1,2.p2	BC046311|Olfr70|56014|olfactory receptor 70	NM_019485|Olfr70|56014|olfactory receptor 70
mm9_v1_chr15_+_35301320_35301357	0.725037	NKX6-1,2.p2	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr2_+_85791221_85791221	0.721975	NKX6-1,2.p2	NM_001011774|Olfr1028|257936|olfactory receptor 1028
mm9_v1_chrX_-_100678555_100678592	0.721862	NKX6-1,2.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr6_+_30462285_30462303	0.721564	NKX6-1,2.p2	NM_029373|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	AK006332|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr4_+_21801372_21801440	0.718866	NKX6-1,2.p2	AK035634|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr15_+_80629020_80629144	0.718353	NKX6-1,2.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr6_+_129543505_129543505	0.712597	NKX6-1,2.p2	AF030311|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1	AF057714|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1	NM_010654|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1
mm9_v1_chr1_-_135557925_135557932	0.712456	NKX6-1,2.p2	BC066163|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr11_-_62190182_62190262	0.710767	NKX6-1,2.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr17_+_56752805_56752873	0.710414	NKX6-1,2.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chr12_-_81861527_81861701	0.7102	NKX6-1,2.p2	AK147473|Gm1568|380768|predicted gene 1568	BC067044|Gm1568|380768|predicted gene 1568	NM_001008423|Gm1568|380768|predicted gene 1568
mm9_v1_chrX_-_86655017_86655027	0.709538	NKX6-1,2.p2	M95564|Pet2|18630|plasmacytoma expressed transcript 2	NM_008821|Pet2|18630|plasmacytoma expressed transcript 2
mm9_v1_chr1_-_166865638_166865652	0.707741	NKX6-1,2.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr7_-_15078274_15078316	0.702104	NKX6-1,2.p2	NM_001184981|Sult2a7|638251|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
mm9_v1_chr13_+_95793012_95793015	0.698618	NKX6-1,2.p2	
mm9_v1_chr19_+_8840883_8840977	0.697352	NKX6-1,2.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr3_-_37131486_37131557	0.692055	NKX6-1,2.p2	AY428162|Il21|60505|interleukin 21	DQ645418|Il21|60505|interleukin 21	BC125414|Il21|60505|interleukin 21	BC125416|Il21|60505|interleukin 21	AF254070|Il21|60505|interleukin 21	NM_021782|Il21|60505|interleukin 21
mm9_v1_chr2_-_156960826_156961007	0.68879	NKX6-1,2.p2	AK128954|Samhd1|56045|SAM domain and HD domain, 1	AK149865|Samhd1|56045|SAM domain and HD domain, 1	AK151335|Samhd1|56045|SAM domain and HD domain, 1	AK153390|Samhd1|56045|SAM domain and HD domain, 1	AK054490|Samhd1|56045|SAM domain and HD domain, 1	AK170688|Samhd1|56045|SAM domain and HD domain, 1	AK171565|Samhd1|56045|SAM domain and HD domain, 1	BC067198|Samhd1|56045|SAM domain and HD domain, 1	U15635|Samhd1|56045|SAM domain and HD domain, 1	BC012721|Samhd1|56045|SAM domain and HD domain, 1	AK078936|Samhd1|56045|SAM domain and HD domain, 1	NM_001139520|Samhd1|56045|SAM domain and HD domain, 1	NM_018851|Samhd1|56045|SAM domain and HD domain, 1
mm9_v1_chr6_-_130258378_130258378	0.686599	NKX6-1,2.p2	AF074459|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF074463|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	NM_024470|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23
mm9_v1_chr14_-_49865069_49865102	0.686318	NKX6-1,2.p2	AK005866|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	BC026534|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	AK007176|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	NM_025956|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene
mm9_v1_chr19_+_22522646_22522721	0.683149	NKX6-1,2.p2	AK044454|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_177341|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141400|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141412|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr6_-_148719426_148719561	0.681241	NKX6-1,2.p2	X67534|Ipo8|320727|importin 8
mm9_v1_chr4_-_126540249_126540348	0.679235	NKX6-1,2.p2	AK018207|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chrX_-_159987479_159987608	0.677218	NKX6-1,2.p2	BC113145|Grpr|14829|gastrin releasing peptide receptor	M61000|Grpr|14829|gastrin releasing peptide receptor	NM_008177|Grpr|14829|gastrin releasing peptide receptor	AK033473|Grpr|14829|gastrin releasing peptide receptor	M57922|Grpr|14829|gastrin releasing peptide receptor
mm9_v1_chr10_-_126748678_126748747	0.677195	NKX6-1,2.p2	BC052042|Mars|216443|methionine-tRNA synthetase	BC079643|Mars|216443|methionine-tRNA synthetase	BC058968|Mars|216443|methionine-tRNA synthetase
mm9_v1_chr6_-_129628927_129628990	0.67611	NKX6-1,2.p2	AF095447|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109782|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109783|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109784|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	NM_001136068|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	NM_010652|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF106009|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AK138801|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF106008|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	BC145003|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	BC145694|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1
mm9_v1_chr6_-_122692754_122692762	0.674687	NKX6-1,2.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr3_+_19794876_19794911	0.673859	NKX6-1,2.p2	BC023403|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene	BC037267|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene	AK014580|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene
mm9_v1_chr10_+_60634711_60634711	0.673024	NKX6-1,2.p2	AK132793|Tbata|65971|thymus, brain and testes associated	NM_001017419|Tbata|65971|thymus, brain and testes associated	NM_001017433|Tbata|65971|thymus, brain and testes associated	NM_001017441|Tbata|65971|thymus, brain and testes associated
mm9_v1_chr14_+_73637697_73637874	0.671582	NKX6-1,2.p2	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr7_+_22134391_22134391	0.671088	NKX6-1,2.p2	NM_001166739|Vmn1r128|667199|vomeronasal 1 receptor 128
mm9_v1_chr19_+_34082779_34082838	0.66995	NKX6-1,2.p2	AK037106|Lipk|240633|lipase, family member K	NM_172837|Lipk|240633|lipase, family member K	BC055815|Lipk|240633|lipase, family member K	AK162706|Lipk|240633|lipase, family member K	BC037229|Lipk|240633|lipase, family member K
mm9_v1_chr1_-_140071630_140071766	0.669479	NKX6-1,2.p2	M11934|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M92933|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr1_-_39608846_39608882	0.667149	NKX6-1,2.p2	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr14_+_51781934_51781934	0.665928	NKX6-1,2.p2	BC117776|Ear5|54159|eosinophil-associated, ribonuclease A family, member 5	NM_019398|Ear5|54159|eosinophil-associated, ribonuclease A family, member 5
mm9_v1_chr6_+_37820779_37820898	0.66089	NKX6-1,2.p2	AK080890|Trim24|21848|tripartite motif-containing 24	NM_145076|Trim24|21848|tripartite motif-containing 24	S78219|Trim24|21848|tripartite motif-containing 24	S78221|Trim24|21848|tripartite motif-containing 24	AK084870|Trim24|21848|tripartite motif-containing 24	BC056959|Trim24|21848|tripartite motif-containing 24
mm9_v1_chrX_+_54662330_54662330	0.657421	NKX6-1,2.p2	NM_001128625|Gm364|245423|predicted gene 364
mm9_v1_chr1_+_164569280_164569299	0.65646	NKX6-1,2.p2	NM_010865|Myoc|17926|myocilin	AK144395|Myoc|17926|myocilin	AB013592|Myoc|17926|myocilin	AF039869|Myoc|17926|myocilin
mm9_v1_chr7_+_46773116_46773135	0.656408	NKX6-1,2.p2	BC080693|Zfp619|70227|zinc finger protein 619	NM_001004139|Zfp619|70227|zinc finger protein 619
mm9_v1_chr18_+_20469364_20469373	0.654183	NKX6-1,2.p2	BC154410|Dsg1a|13510|desmoglein 1 alpha	NM_010079|Dsg1a|13510|desmoglein 1 alpha
mm9_v1_chr9_-_123587923_123587963	0.652358	NKX6-1,2.p2	AJ964961|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	BC118933|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	NM_139142|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK160468|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK043297|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK080979|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK140445|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AJ428067|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A
mm9_v1_chr3_+_96025040_96025063	0.651547	NKX6-1,2.p2	AK090189|Hist2h2be|319190|histone cluster 2, H2be	AK143398|Hist2h2be|319190|histone cluster 2, H2be	AK162494|Hist2h2be|319190|histone cluster 2, H2be	AK167546|Hist2h2be|319190|histone cluster 2, H2be	AK170749|Hist2h2be|319190|histone cluster 2, H2be	BC058562|Hist2h2be|319190|histone cluster 2, H2be	AK078533|Hist2h2be|319190|histone cluster 2, H2be	NM_178214|Hist2h2be|319190|histone cluster 2, H2be	AK168767|Hist2h2be|319190|histone cluster 2, H2be	BC047137|Hist2h2be|319190|histone cluster 2, H2be
mm9_v1_chr17_+_8565260_8565260	0.65141	NKX6-1,2.p2	NM_001161832|T2|21331|brachyury 2
mm9_v1_chr2_+_118598504_118598509	0.650512	NKX6-1,2.p2	NM_001145644|Phgr1|53906|proline/histidine/glycine-rich 1	AK008311|Phgr1|53906|proline/histidine/glycine-rich 1	AK019007|Phgr1|53906|proline/histidine/glycine-rich 1
mm9_v1_chr12_-_56087322_56087322	0.649001	NKX6-1,2.p2	AK135668|Baz1a|217578|bromodomain adjacent to zinc finger domain 1A	NM_013815|Baz1a|217578|bromodomain adjacent to zinc finger domain 1A
mm9_v1_chr6_-_123600652_123600652	0.648284	NKX6-1,2.p2	NM_001104637|Vmn2r22|546913|vomeronasal 2, receptor 22
mm9_v1_chr10_+_87553816_87553819	0.645433	NKX6-1,2.p2	AK138363|Pmch|110312|pro-melanin-concentrating hormone	BC048534|Pmch|110312|pro-melanin-concentrating hormone	NM_029971|Pmch|110312|pro-melanin-concentrating hormone	AK020723|Pmch|110312|pro-melanin-concentrating hormone
mm9_v1_chr7_+_127317371_127317410	0.645353	NKX6-1,2.p2	NM_028085|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	AK008229|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC115784|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC118013|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B
mm9_v1_chr7_+_134380580_134380598	0.644622	NKX6-1,2.p2	AK218462|Zfp553|233887|zinc finger protein 553
mm9_v1_chr12_+_120681882_120681882	0.644022	NKX6-1,2.p2	NM_001163136|Macc1|238455|metastasis associated in colon cancer 1
mm9_v1_chr11_-_82834223_82834322	0.643885	NKX6-1,2.p2	BC152549|Slfn8|276950|schlafen 8	NM_001167743|Slfn8|276950|schlafen 8	AY261799|Slfn8|276950|schlafen 8	AY261798|Slfn8|276950|schlafen 8	NM_181545|Slfn8|276950|schlafen 8
mm9_v1_chr19_-_21028691_21028691	0.642118	NKX6-1,2.p2	AF417579|Tmc1|13409|transmembrane channel-like gene family 1	NM_028953|Tmc1|13409|transmembrane channel-like gene family 1
mm9_v1_chr17_+_70871393_70871416	0.641431	NKX6-1,2.p2	AK036307|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr9_-_6266546_6266546	0.637889	NKX6-1,2.p2	AK005882|Ddi1|71829|DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	NM_027942|Ddi1|71829|DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)
mm9_v1_chr9_+_35366065_35366179	0.637481	NKX6-1,2.p2	AK030639|Pus3|67049|pseudouridine synthase 3
mm9_v1_chr8_-_8667108_8667134	0.633926	NKX6-1,2.p2	AK034581|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr3_+_60432922_60432975	0.630355	NKX6-1,2.p2	AK166145|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr8_+_34887177_34887229	0.628728	NKX6-1,2.p2	AK178391|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr4_+_154256366_154256404	0.628376	NKX6-1,2.p2	AK154366|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chr2_+_172196428_172196504	0.627638	NKX6-1,2.p2	BC003440|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1	NM_024199|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1	AK050686|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm9_v1_chr11_-_120421805_120421818	0.626398	NKX6-1,2.p2	AK196256|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK201336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr13_+_105019467_105019467	0.624744	NKX6-1,2.p2	AB043687|Cenpk|60411|centromere protein K	NM_021790|Cenpk|60411|centromere protein K
mm9_v1_chr19_+_12873063_12873098	0.62363	NKX6-1,2.p2	AK039922|Lpxn|107321|leupaxin	AB071194|Lpxn|107321|leupaxin	NM_134152|Lpxn|107321|leupaxin
mm9_v1_chr4_-_94595442_94595518	0.620831	NKX6-1,2.p2	AB438105|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AB438106|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK006446|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	DQ336137|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016313|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	BC089517|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	NM_027089|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016738|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828781|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828782|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene
mm9_v1_chr19_+_11482121_11482202	0.620569	NKX6-1,2.p2	AK157137|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	NM_029499|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK151045|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK017928|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK172650|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AF237914|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	BC027496|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C
mm9_v1_chr8_-_124884624_124884645	0.617437	NKX6-1,2.p2	BC117988|Trhr2|170732|thyrotropin releasing hormone receptor 2	BC117989|Trhr2|170732|thyrotropin releasing hormone receptor 2	AF283762|Trhr2|170732|thyrotropin releasing hormone receptor 2	NM_133202|Trhr2|170732|thyrotropin releasing hormone receptor 2
mm9_v1_chr5_-_100465086_100465197	0.615631	NKX6-1,2.p2	AK011143|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chr3_+_93197619_93197620	0.615052	NKX6-1,2.p2	AK009453|Rptn|20129|repetin	NM_009100|Rptn|20129|repetin
mm9_v1_chr1_-_140071818_140071883	0.610926	NKX6-1,2.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr4_-_131909543_131909559	0.60994	NKX6-1,2.p2	AJ006837|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3	AK076188|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr16_+_43321404_43321450	0.607756	NKX6-1,2.p2	
mm9_v1_chr7_-_38804503_38804582	0.607557	NKX6-1,2.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr11_-_78200059_78200059	0.606109	NKX6-1,2.p2	NM_008238|Foxn1|15218|forkhead box N1	X81593|Foxn1|15218|forkhead box N1
mm9_v1_chr19_+_38470458_38470592	0.60376	NKX6-1,2.p2	BC137663|Tmem20|240660|transmembrane protein 20	BC137664|Tmem20|240660|transmembrane protein 20	AK041618|Tmem20|240660|transmembrane protein 20	NM_175507|Tmem20|240660|transmembrane protein 20	AK030517|Tmem20|240660|transmembrane protein 20	AK171987|Tmem20|240660|transmembrane protein 20	AK052365|Tmem20|240660|transmembrane protein 20
mm9_v1_chr6_-_118361541_118361556	0.602479	NKX6-1,2.p2	BC030906|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr1_-_93308194_93308203	0.601414	NKX6-1,2.p2	
mm9_v1_chr5_-_44162032_44162072	0.600866	NKX6-1,2.p2	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr6_-_50250316_50250352	0.600172	NKX6-1,2.p2	AK042104|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr2_-_9800211_9800245	0.600015	NKX6-1,2.p2	AK156634|Gata3|14462|GATA binding protein 3	AK053728|Gata3|14462|GATA binding protein 3	AK090089|Gata3|14462|GATA binding protein 3	AK155549|Gata3|14462|GATA binding protein 3	NM_008091|Gata3|14462|GATA binding protein 3
mm9_v1_chr5_-_137918291_137918291	0.59768	NKX6-1,2.p2	NM_011741|Zan|22635|zonadhesin	U97068|Zan|22635|zonadhesin
mm9_v1_chr7_+_111367306_111367377	0.59638	NKX6-1,2.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chr9_-_109064517_109064535	0.594782	NKX6-1,2.p2	BC099397|Fbxw21|320082|F-box and WD-40 domain protein 21	AK136136|Fbxw21|320082|F-box and WD-40 domain protein 21	AK087902|Fbxw21|320082|F-box and WD-40 domain protein 21	AK135949|Fbxw21|320082|F-box and WD-40 domain protein 21	AK087710|Fbxw21|320082|F-box and WD-40 domain protein 21	NM_177069|Fbxw21|320082|F-box and WD-40 domain protein 21
mm9_v1_chr11_+_118338269_118338301	0.59359	NKX6-1,2.p2	AK048667|Engase|217364|endo-beta-N-acetylglucosaminidase	BC120923|Engase|217364|endo-beta-N-acetylglucosaminidase	BC120924|Engase|217364|endo-beta-N-acetylglucosaminidase	NM_172573|Engase|217364|endo-beta-N-acetylglucosaminidase	AK084254|Engase|217364|endo-beta-N-acetylglucosaminidase	BC060640|Engase|217364|endo-beta-N-acetylglucosaminidase	AK167142|Engase|217364|endo-beta-N-acetylglucosaminidase
mm9_v1_chr8_-_112563233_112563253	0.590875	NKX6-1,2.p2	AK009113|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	NM_011998|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	BC057886|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4
mm9_v1_chr3_+_40439675_40439741	0.590613	NKX6-1,2.p2	NM_175515|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	AK035092|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC125523|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC132387|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)
mm9_v1_chr18_+_57628139_57628180	0.590346	NKX6-1,2.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr17_+_18718690_18718690	0.589373	NKX6-1,2.p2	NM_001104547|Vmn2r96|433070|vomeronasal 2, receptor 96
mm9_v1_chr18_+_37649118_37649272	0.589084	NKX6-1,2.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr9_-_44550590_44550598	0.587482	NKX6-1,2.p2	
mm9_v1_chr4_+_139209452_139209483	0.584434	NKX6-1,2.p2	AF337041|Tas1r2|83770|taste receptor, type 1, member 2	NM_031873|Tas1r2|83770|taste receptor, type 1, member 2	BC137740|Tas1r2|83770|taste receptor, type 1, member 2	BC144879|Tas1r2|83770|taste receptor, type 1, member 2	AY032623|Tas1r2|83770|taste receptor, type 1, member 2
mm9_v1_chr7_-_138289796_138289827	0.583369	NKX6-1,2.p2	BC115646|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	BC115647|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	NM_173409|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK016625|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK016371|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK029607|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK161407|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene
mm9_v1_chr3_-_144595486_144595494	0.582616	NKX6-1,2.p2	BC139088|AI747448|99709|expressed sequence AI747448	BC139089|AI747448|99709|expressed sequence AI747448	AK136515|AI747448|99709|expressed sequence AI747448	NM_001033199|AI747448|99709|expressed sequence AI747448
mm9_v1_chr5_-_145962668_145962756	0.58017	NKX6-1,2.p2	BC099448|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC141244|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	U62906|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC027512|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK153972|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK013258|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK009842|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK138775|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	NM_023322|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14
mm9_v1_chr15_-_96245209_96245211	0.579997	NKX6-1,2.p2	AK219742|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr16_-_97392319_97392342	0.579606	NKX6-1,2.p2	AY005483|Dscam|13508|Down syndrome cell adhesion molecule	NM_031174|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr9_-_96233411_96233654	0.578374	NKX6-1,2.p2	AK217555|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK213033|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK205378|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK217181|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK178890|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK181142|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK185963|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK212665|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK214140|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK216038|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218295|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218384|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chrX_-_162948399_162948409	0.574541	NKX6-1,2.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr8_-_74736717_74736735	0.574256	NKX6-1,2.p2	BC120812|Cib3|234421|calcium and integrin binding family member 3	BC120814|Cib3|234421|calcium and integrin binding family member 3	AK050094|Cib3|234421|calcium and integrin binding family member 3	NM_001080812|Cib3|234421|calcium and integrin binding family member 3
mm9_v1_chr5_+_88885015_88885035	0.573425	NKX6-1,2.p2	AK017250|Ambn|11698|ameloblastin	BC087927|Ambn|11698|ameloblastin	NM_009664|Ambn|11698|ameloblastin	U65021|Ambn|11698|ameloblastin
mm9_v1_chr17_+_13208071_13208135	0.573337	NKX6-1,2.p2	AK206580|Sod2|20656|superoxide dismutase 2, mitochondrial
mm9_v1_chr6_-_130143018_130143129	0.57328	NKX6-1,2.p2	BC116376|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC131790|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF237686|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	NM_010651|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49865|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49866|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49867|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9
mm9_v1_chr19_+_45150586_45150639	0.573174	NKX6-1,2.p2	AK030678|Kazald1|107250|Kazal-type serine peptidase inhibitor domain 1	NM_178929|Kazald1|107250|Kazal-type serine peptidase inhibitor domain 1	BC115642|Kazald1|107250|Kazal-type serine peptidase inhibitor domain 1	BC115643|Kazald1|107250|Kazal-type serine peptidase inhibitor domain 1
mm9_v1_chr14_-_37862119_37862149	0.570845	NKX6-1,2.p2	AF076930|Rgr|57811|retinal G protein coupled receptor	BC086689|Rgr|57811|retinal G protein coupled receptor	BC119055|Rgr|57811|retinal G protein coupled receptor	BC082611|Rgr|57811|retinal G protein coupled receptor	AK044450|Rgr|57811|retinal G protein coupled receptor	AK044649|Rgr|57811|retinal G protein coupled receptor	AK149272|Rgr|57811|retinal G protein coupled receptor	NM_021340|Rgr|57811|retinal G protein coupled receptor
mm9_v1_chr12_-_74147698_74147707	0.570683	NKX6-1,2.p2	AK131925|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	NM_009189|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK144753|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chrX_-_20639111_20639168	0.570414	NKX6-1,2.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr10_+_115254308_115254566	0.570334	NKX6-1,2.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr1_+_176260648_176260661	0.569082	NKX6-1,2.p2	AK007658|1810030J14Rik|66289|RIKEN cDNA 1810030J14 gene	NM_025470|1810030J14Rik|66289|RIKEN cDNA 1810030J14 gene	AK007963|1810030J14Rik|66289|RIKEN cDNA 1810030J14 gene	BC024348|1810030J14Rik|66289|RIKEN cDNA 1810030J14 gene
mm9_v1_chr2_-_37502738_37502804	0.56797	NKX6-1,2.p2	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr6_+_122576437_122576540	0.566989	NKX6-1,2.p2	AK135769|Dppa3|73708|developmental pluripotency-associated 3	AK136263|Dppa3|73708|developmental pluripotency-associated 3	AY134859|Dppa3|73708|developmental pluripotency-associated 3	AF490347|Dppa3|73708|developmental pluripotency-associated 3	AY082485|Dppa3|73708|developmental pluripotency-associated 3	NM_139218|Dppa3|73708|developmental pluripotency-associated 3	BC099433|Dppa3|73708|developmental pluripotency-associated 3	BC100331|Dppa3|73708|developmental pluripotency-associated 3	BC107340|Dppa3|73708|developmental pluripotency-associated 3	BC107341|Dppa3|73708|developmental pluripotency-associated 3	AK010723|Dppa3|73708|developmental pluripotency-associated 3	AB072734|Dppa3|73708|developmental pluripotency-associated 3
mm9_v1_chr9_-_78226334_78226394	0.566674	NKX6-1,2.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chrX_+_130722039_130722141	0.565424	NKX6-1,2.p2	AK016872|Arl13a|74448|ADP-ribosylation factor-like 13A	NM_028947|Arl13a|74448|ADP-ribosylation factor-like 13A	BC100522|Arl13a|74448|ADP-ribosylation factor-like 13A
mm9_v1_chr18_+_32996878_32997001	0.565305	NKX6-1,2.p2	AK156822|Wdr36|225348|WD repeat domain 36	NM_001110015|Wdr36|225348|WD repeat domain 36	NM_001110016|Wdr36|225348|WD repeat domain 36	NM_144863|Wdr36|225348|WD repeat domain 36	AK045396|Wdr36|225348|WD repeat domain 36	BC022132|Wdr36|225348|WD repeat domain 36	BC094453|Wdr36|225348|WD repeat domain 36	AK171683|Wdr36|225348|WD repeat domain 36	AK077545|Wdr36|225348|WD repeat domain 36	AK172377|Wdr36|225348|WD repeat domain 36	AK140019|Wdr36|225348|WD repeat domain 36	AK172054|Wdr36|225348|WD repeat domain 36	AK041763|Wdr36|225348|WD repeat domain 36	BC025809|Wdr36|225348|WD repeat domain 36	AK155965|Wdr36|225348|WD repeat domain 36
mm9_v1_chr11_-_95973271_95973275	0.564933	NKX6-1,2.p2	AK166939|Calcoco2|76815|calcium binding and coiled-coil domain 2	AF490344|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK010816|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK145542|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166710|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166756|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167009|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167172|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167291|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_001100177|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_029755|Calcoco2|76815|calcium binding and coiled-coil domain 2
mm9_v1_chr2_-_5635517_5635531	0.564818	NKX6-1,2.p2	AK147657|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK162754|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr15_-_83895778_83895778	0.564525	NKX6-1,2.p2	BC065111|Efcab6|77627|EF-hand calcium binding domain 6	NM_029946|Efcab6|77627|EF-hand calcium binding domain 6
mm9_v1_chr15_-_102993757_102993775	0.563431	NKX6-1,2.p2	AK045411|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK172510|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK004735|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr16_-_58918311_58918311	0.556963	NKX6-1,2.p2	NM_001011662|Olfr180|258178|olfactory receptor 180
mm9_v1_chr4_-_128639595_128639690	0.556637	NKX6-1,2.p2	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr5_-_121822213_121822316	0.554913	NKX6-1,2.p2	AK211451|Trafd1|231712|TRAF type zinc finger domain containing 1	AK212088|Trafd1|231712|TRAF type zinc finger domain containing 1
mm9_v1_chr11_+_96668506_96668525	0.553575	NKX6-1,2.p2	AK080243|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	AK088236|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)
mm9_v1_chr12_+_53800302_53800317	0.553453	NKX6-1,2.p2	DQ233645|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr6_+_8159188_8159393	0.553205	NKX6-1,2.p2	NM_145374|Mios|252875|missing oocyte, meiosis regulator, homolog (Drosophila)	BC020002|Mios|252875|missing oocyte, meiosis regulator, homolog (Drosophila)
mm9_v1_chr7_+_13615892_13615926	0.552017	NKX6-1,2.p2	AK193916|Trim28|21849|tripartite motif-containing 28	AK194102|Trim28|21849|tripartite motif-containing 28	AK190398|Trim28|21849|tripartite motif-containing 28	AK177374|Trim28|21849|tripartite motif-containing 28	AK189444|Trim28|21849|tripartite motif-containing 28	AK190056|Trim28|21849|tripartite motif-containing 28	AK190280|Trim28|21849|tripartite motif-containing 28	AK192048|Trim28|21849|tripartite motif-containing 28	AK196455|Trim28|21849|tripartite motif-containing 28	AK196856|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr14_+_67254087_67254180	0.55047	NKX6-1,2.p2	AK085653|Adra1a|11549|adrenergic receptor, alpha 1a	AK079597|Adra1a|11549|adrenergic receptor, alpha 1a	NM_013461|Adra1a|11549|adrenergic receptor, alpha 1a	AK050183|Adra1a|11549|adrenergic receptor, alpha 1a	AK042759|Adra1a|11549|adrenergic receptor, alpha 1a	AK138919|Adra1a|11549|adrenergic receptor, alpha 1a
mm9_v1_chr2_-_35892046_35892111	0.549626	NKX6-1,2.p2	
mm9_v1_chr1_+_109407998_109408121	0.548776	NKX6-1,2.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr10_+_87429415_87429534	0.548455	NKX6-1,2.p2	M30774|Tyms-ps|22172|thymidylate synthase, pseudogene
mm9_v1_chr6_+_125072851_125072907	0.547304	NKX6-1,2.p2	AK148402|Chd4|107932|chromodomain helicase DNA binding protein 4
mm9_v1_chr12_-_16747022_16747030	0.543596	NKX6-1,2.p2	AK147337|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr7_+_7124063_7124102	0.543548	NKX6-1,2.p2	NM_146179|Zfp418|232854|zinc finger protein 418	AK054428|Zfp418|232854|zinc finger protein 418	BC024761|Zfp418|232854|zinc finger protein 418	BC026490|Zfp418|232854|zinc finger protein 418	AK039147|Zfp418|232854|zinc finger protein 418
mm9_v1_chr10_-_40602888_40602905	0.541751	NKX6-1,2.p2	AK040680|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr7_-_97103461_97103540	0.541409	NKX6-1,2.p2	
mm9_v1_chr6_-_69193672_69193737	0.54113	NKX6-1,2.p2	
mm9_v1_chr10_-_117229719_117229775	0.539252	NKX6-1,2.p2	AK133938|Nup107|103468|nucleoporin 107	BC057591|Nup107|103468|nucleoporin 107	AK088625|Nup107|103468|nucleoporin 107	AK088303|Nup107|103468|nucleoporin 107	BC092261|Nup107|103468|nucleoporin 107	AK043454|Nup107|103468|nucleoporin 107	AK161665|Nup107|103468|nucleoporin 107	AK088069|Nup107|103468|nucleoporin 107	NM_134010|Nup107|103468|nucleoporin 107
mm9_v1_chr19_-_44181897_44181978	0.537758	NKX6-1,2.p2	AK035326|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	U12473|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK150039|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK165275|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK018671|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155328|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	BC018243|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155393|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK164236|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_001162410|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_007700|Chuk|12675|conserved helix-loop-helix ubiquitous kinase
mm9_v1_chr14_+_37881214_37881259	0.536503	NKX6-1,2.p2	BC037728|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044611|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044383|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	NM_173418|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	BC057628|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
mm9_v1_chr1_+_66368571_66368671	0.533519	NKX6-1,2.p2	AK046341|Mtap2|17756|microtubule-associated protein 2	AK086484|Mtap2|17756|microtubule-associated protein 2	M21041|Mtap2|17756|microtubule-associated protein 2	AK141458|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr14_+_52913867_52913879	0.532615	NKX6-1,2.p2	AK207275|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr1_-_175912844_175912974	0.531683	NKX6-1,2.p2	AF140672|Ifi202b|26388|interferon activated gene 202B	NM_008327|Ifi202b|26388|interferon activated gene 202B	NM_011940|Ifi202b|26388|interferon activated gene 202B
mm9_v1_chr2_+_178165235_178165311	0.530548	NKX6-1,2.p2	AK132328|Cdh26|381409|cadherin-like 26	BC053928|Cdh26|381409|cadherin-like 26	NM_198656|Cdh26|381409|cadherin-like 26
mm9_v1_chr15_-_99609550_99609679	0.53016	NKX6-1,2.p2	AK218310|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr4_-_3865501_3865606	0.52925	NKX6-1,2.p2	BC139283|Plag1|56711|pleiomorphic adenoma gene 1	BC139285|Plag1|56711|pleiomorphic adenoma gene 1	AY574219|Plag1|56711|pleiomorphic adenoma gene 1	AK044405|Plag1|56711|pleiomorphic adenoma gene 1	NM_019969|Plag1|56711|pleiomorphic adenoma gene 1
mm9_v1_chr3_+_102800607_102800650	0.528941	NKX6-1,2.p2	
mm9_v1_chr10_+_89280918_89280988	0.528345	NKX6-1,2.p2	AK079985|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK046432|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK008586|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like
mm9_v1_chr15_+_80453912_80453951	0.52578	NKX6-1,2.p2	AF055465|Grap2|17444|GRB2-related adaptor protein 2	NM_010815|Grap2|17444|GRB2-related adaptor protein 2	AK156939|Grap2|17444|GRB2-related adaptor protein 2	AJ011735|Grap2|17444|GRB2-related adaptor protein 2	AF129477|Grap2|17444|GRB2-related adaptor protein 2	AF236118|Grap2|17444|GRB2-related adaptor protein 2
mm9_v1_chr4_+_88487719_88487764	0.5247	NKX6-1,2.p2	BC119349|Ifna4|15967|interferon alpha 4	BC119351|Ifna4|15967|interferon alpha 4	NM_010504|Ifna4|15967|interferon alpha 4	BC116217|Ifna4|15967|interferon alpha 4
mm9_v1_chr3_+_14641726_14641789	0.524579	NKX6-1,2.p2	AK162621|Car13|71934|carbonic anhydrase 13	NM_024495|Car13|71934|carbonic anhydrase 13	AK153080|Car13|71934|carbonic anhydrase 13	AK153353|Car13|71934|carbonic anhydrase 13	AK010166|Car13|71934|carbonic anhydrase 13	AK150871|Car13|71934|carbonic anhydrase 13	AK150897|Car13|71934|carbonic anhydrase 13	AK151978|Car13|71934|carbonic anhydrase 13	BC064050|Car13|71934|carbonic anhydrase 13	AF231123|Car13|71934|carbonic anhydrase 13	AK152124|Car13|71934|carbonic anhydrase 13	AK153258|Car13|71934|carbonic anhydrase 13	AK151519|Car13|71934|carbonic anhydrase 13
mm9_v1_chr14_+_44534733_44534733	0.524533	NKX6-1,2.p2	NM_001123394|Ang3|11730|angiogenin, ribonuclease A family, member 3	NM_007448|Ang5|503844|angiogenin, ribonuclease A family, member 5	U72672|Ang3|11730|angiogenin, ribonuclease A family, member 3
mm9_v1_chr1_-_87495323_87495391	0.524355	NKX6-1,2.p2	AK019873|Sp110|109032|Sp110 nuclear body protein	AK150373|Sp110|109032|Sp110 nuclear body protein	BC099598|Sp110|109032|Sp110 nuclear body protein	AK077800|Sp110|109032|Sp110 nuclear body protein	BC094500|Sp110|109032|Sp110 nuclear body protein	BC018413|Sp110|109032|Sp110 nuclear body protein	BC035444|Sp110|109032|Sp110 nuclear body protein	BC039938|Sp110|109032|Sp110 nuclear body protein	AY845948|Sp110|109032|Sp110 nuclear body protein
mm9_v1_chr19_-_6986037_6986245	0.52328	NKX6-1,2.p2	AK008536|Esrra|26379|estrogen related receptor, alpha	BC052930|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chr1_-_177618483_177618483	0.521815	NKX6-1,2.p2	BC118932|Chml|12663|choroideremia-like	NM_021350|Chml|12663|choroideremia-like
mm9_v1_chr4_-_144311306_144311306	0.521815	NKX6-1,2.p2	NM_001085536|Gm13178|546849|predicted gene 13178
mm9_v1_chr14_+_66424675_66424787	0.521436	NKX6-1,2.p2	AK076121|Pbk|52033|PDZ binding kinase	BC020099|Pbk|52033|PDZ binding kinase	AB041882|Pbk|52033|PDZ binding kinase	NM_023209|Pbk|52033|PDZ binding kinase	AK003838|Pbk|52033|PDZ binding kinase
mm9_v1_chr19_+_12502394_12502461	0.521057	NKX6-1,2.p2	NM_019540|Pfpl|56093|pore forming protein-like	AF250839|Pfpl|56093|pore forming protein-like	BC052215|Pfpl|56093|pore forming protein-like	AK141262|Pfpl|56093|pore forming protein-like
mm9_v1_chr16_-_19884312_19884367	0.520601	NKX6-1,2.p2	BC053981|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK153879|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK086168|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr15_+_98538624_98538661	0.51998	NKX6-1,2.p2	AK077174|Ccdc65|105833|coiled-coil domain containing 65	BC048073|Ccdc65|105833|coiled-coil domain containing 65	AF454432|Ccdc65|105833|coiled-coil domain containing 65	NM_153518|Ccdc65|105833|coiled-coil domain containing 65	BC056947|Ccdc65|105833|coiled-coil domain containing 65	BC060155|Ccdc65|105833|coiled-coil domain containing 65
mm9_v1_chr15_-_59848167_59848172	0.519891	NKX6-1,2.p2	AK016789|4933412E24Rik|71088|RIKEN cDNA 4933412E24 gene	NM_027668|4933412E24Rik|71088|RIKEN cDNA 4933412E24 gene
mm9_v1_chr11_+_46385014_46385159	0.518489	NKX6-1,2.p2	NM_001025435|BC053393|407814|cDNA sequence BC053393	BC052651|BC053393|407814|cDNA sequence BC053393	AK166706|BC053393|407814|cDNA sequence BC053393	AK166838|BC053393|407814|cDNA sequence BC053393	AK145729|BC053393|407814|cDNA sequence BC053393	AK140690|BC053393|407814|cDNA sequence BC053393
mm9_v1_chr1_-_65169708_65169766	0.516097	NKX6-1,2.p2	AK164708|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	BC137870|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	AK085417|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	NM_175293|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene
mm9_v1_chr6_-_56319574_56319627	0.513957	NKX6-1,2.p2	AK077123|Pde1c|18575|phosphodiesterase 1C	AK015375|Pde1c|18575|phosphodiesterase 1C	AK014887|Pde1c|18575|phosphodiesterase 1C	AK133243|Pde1c|18575|phosphodiesterase 1C	AK029531|Pde1c|18575|phosphodiesterase 1C	NM_001159955|Pde1c|18575|phosphodiesterase 1C	NM_001159956|Pde1c|18575|phosphodiesterase 1C	NM_001159957|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr2_-_69627542_69627605	0.5127	NKX6-1,2.p2	BC125570|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC132491|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC145015|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	NM_001077684|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	AK015894|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	AK016309|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC099565|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene
mm9_v1_chr6_-_40850379_40850385	0.5084	NKX6-1,2.p2	BC048599|BC048599|232717|cDNA sequence BC048599	AK075754|BC048599|232717|cDNA sequence BC048599	NM_175020|BC048599|232717|cDNA sequence BC048599
mm9_v1_chr18_+_37571327_37571327	0.506937	NKX6-1,2.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr5_-_86626849_86626920	0.505494	NKX6-1,2.p2	L28757|Gnrhr|14715|gonadotropin releasing hormone receptor	L28758|Gnrhr|14715|gonadotropin releasing hormone receptor	BC061250|Gnrhr|14715|gonadotropin releasing hormone receptor	M93108|Gnrhr|14715|gonadotropin releasing hormone receptor	L01119|Gnrhr|14715|gonadotropin releasing hormone receptor	NM_010323|Gnrhr|14715|gonadotropin releasing hormone receptor	L28756|Gnrhr|14715|gonadotropin releasing hormone receptor
mm9_v1_chr2_+_29925959_29926154	0.505245	NKX6-1,2.p2	BC012508|Set|56086|SET nuclear oncogene
mm9_v1_chr19_+_12873115_12873132	0.502768	NKX6-1,2.p2	BC026563|Lpxn|107321|leupaxin
mm9_v1_chr5_-_87998014_87998030	0.497362	NKX6-1,2.p2	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr17_+_8118823_8118919	0.496658	NKX6-1,2.p2	NM_145968|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC030886|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC039780|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC150728|Tagap|72536|T-cell activation Rho GTPase-activating protein
mm9_v1_chr11_+_79845841_79845980	0.495506	NKX6-1,2.p2	AK076010|Suz12|52615|suppressor of zeste 12 homolog (Drosophila)
mm9_v1_chr7_-_69609363_69609425	0.494845	NKX6-1,2.p2	BC138242|Peg12|27412|paternally expressed 12	BC138243|Peg12|27412|paternally expressed 12	AF148857|Peg12|27412|paternally expressed 12	NM_013788|Peg12|27412|paternally expressed 12
mm9_v1_chr1_+_42908077_42908173	0.494242	NKX6-1,2.p2	NM_023514|Mrps9|69527|mitochondrial ribosomal protein S9	AK049465|Mrps9|69527|mitochondrial ribosomal protein S9	AK144656|Mrps9|69527|mitochondrial ribosomal protein S9	AK150985|Mrps9|69527|mitochondrial ribosomal protein S9	AK031497|Mrps9|69527|mitochondrial ribosomal protein S9	AK009082|Mrps9|69527|mitochondrial ribosomal protein S9	BC116437|Mrps9|69527|mitochondrial ribosomal protein S9
mm9_v1_chr6_+_17616617_17616660	0.492737	NKX6-1,2.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr16_-_64786146_64786199	0.49072	NKX6-1,2.p2	BC068018|Zfp654|72020|zinc finger protein 654	NM_028059|Zfp654|72020|zinc finger protein 654	AK005508|Zfp654|72020|zinc finger protein 654
mm9_v1_chr3_-_145770980_145771093	0.48991	NKX6-1,2.p2	AK029903|Wdr63|242253|WD repeat domain 63	NM_172864|Wdr63|242253|WD repeat domain 63	BC158119|Wdr63|242253|WD repeat domain 63
mm9_v1_chr7_+_125740810_125740810	0.48952	NKX6-1,2.p2	AK028404|Tmc5|74424|transmembrane channel-like gene family 5	NM_001105252|Tmc5|74424|transmembrane channel-like gene family 5
mm9_v1_chrX_+_137457727_137457737	0.488854	NKX6-1,2.p2	AK006862|Vsig1|78789|V-set and immunoglobulin domain containing 1	NM_026103|Vsig1|78789|V-set and immunoglobulin domain containing 1	AK006251|Vsig1|78789|V-set and immunoglobulin domain containing 1	BC048589|Vsig1|78789|V-set and immunoglobulin domain containing 1
mm9_v1_chr13_-_35118959_35118964	0.486132	NKX6-1,2.p2	
mm9_v1_chr6_-_130183339_130183339	0.484878	NKX6-1,2.p2	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr11_-_106257752_106257921	0.483444	NKX6-1,2.p2	AK162104|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1
mm9_v1_chr13_+_3837037_3837046	0.482686	NKX6-1,2.p2	BC145379|Calm4|80796|calmodulin 4
mm9_v1_chr13_-_55201578_55201611	0.481847	NKX6-1,2.p2	BC051659|Uimc1|20184|ubiquitin interaction motif containing 1	BC066220|Uimc1|20184|ubiquitin interaction motif containing 1	AK083342|Uimc1|20184|ubiquitin interaction motif containing 1	BC037092|Uimc1|20184|ubiquitin interaction motif containing 1	BC040808|Uimc1|20184|ubiquitin interaction motif containing 1
mm9_v1_chr1_+_129625987_129626062	0.481627	NKX6-1,2.p2	AK143962|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	NM_001033041|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	BC139281|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	AB071419|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase
mm9_v1_chr15_+_102236709_102236810	0.480621	NKX6-1,2.p2	EF200005|Sp1|20683|trans-acting transcription factor 1	NM_013672|Sp1|20683|trans-acting transcription factor 1	AF022363|Sp1|20683|trans-acting transcription factor 1	S79832|Sp1|20683|trans-acting transcription factor 1	AF062566|Sp1|20683|trans-acting transcription factor 1
mm9_v1_chr3_+_59729135_59729135	0.480247	NKX6-1,2.p2	AK081819|C130079G13Rik|229333|RIKEN cDNA C130079G13 gene	NM_177661|C130079G13Rik|229333|RIKEN cDNA C130079G13 gene
mm9_v1_chr7_+_111392968_111392986	0.479395	NKX6-1,2.p2	NM_030684|Trim34a|94094|tripartite motif-containing 34A	AK089187|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chrX_+_104344953_104344955	0.479136	NKX6-1,2.p2	NM_175442|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene	AK041740|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr2_-_121282428_121282516	0.478716	NKX6-1,2.p2	BC026459|Serinc4|574418|serine incorporator 4	BC083132|Serinc4|574418|serine incorporator 4	NM_001025371|Serinc4|574418|serine incorporator 4	AK044479|Serinc4|574418|serine incorporator 4
mm9_v1_chr10_-_52058305_52058381	0.478059	NKX6-1,2.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr2_+_17986187_17986431	0.477688	NKX6-1,2.p2	AK154320|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC055298|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK147388|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC069988|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF010135|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK220504|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK045042|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr16_-_88869611_88869654	0.47517	NKX6-1,2.p2	AF345292|Krtap16-2|170652|keratin associated protein 16-2	AF345299|Krtap16-9|170657|keratin associated protein 16-9	NM_130876|Krtap16-9|170657|keratin associated protein 16-9
mm9_v1_chr18_+_50438022_50438024	0.470945	NKX6-1,2.p2	AY692448|Fam170a|225497|family with sequence similarity 170, member A	AY692449|Fam170a|225497|family with sequence similarity 170, member A	NM_001004061|Fam170a|225497|family with sequence similarity 170, member A	BC147592|Fam170a|225497|family with sequence similarity 170, member A	BC147595|Fam170a|225497|family with sequence similarity 170, member A	BC172108|Fam170a|225497|family with sequence similarity 170, member A	BC172111|Fam170a|225497|family with sequence similarity 170, member A	BC172113|Fam170a|225497|family with sequence similarity 170, member A
mm9_v1_chr2_-_125549883_125549883	0.470841	NKX6-1,2.p2	AK036946|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4	NM_199022|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4
mm9_v1_chr13_+_67964262_67964324	0.468742	NKX6-1,2.p2	AK133011|BC048507|408058|cDNA sequence BC048507	BC048507|BC048507|408058|cDNA sequence BC048507	NM_001001185|BC048507|408058|cDNA sequence BC048507
mm9_v1_chr9_+_5308846_5308883	0.468005	NKX6-1,2.p2	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr3_+_17848443_17848443	0.460221	NKX6-1,2.p2	AK005586|Cypt12|75439|cysteine-rich perinuclear theca 12	NM_029289|Cypt12|75439|cysteine-rich perinuclear theca 12
mm9_v1_chr14_+_30806158_30806226	0.456204	NKX6-1,2.p2	AK179069|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)
mm9_v1_chr5_+_111717505_111717674	0.455866	NKX6-1,2.p2	AK132014|Ttc28|209683|tetratricopeptide repeat domain 28	AK172165|Ttc28|209683|tetratricopeptide repeat domain 28
mm9_v1_chr5_-_84846348_84846408	0.453816	NKX6-1,2.p2	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr4_-_73566663_73566663	0.451911	NKX6-1,2.p2	NM_001126326|Gm11756|623281|predicted gene 11756
mm9_v1_chr11_-_99412144_99412178	0.450578	NKX6-1,2.p2	BC120760|Krtap3-3|66380|keratin associated protein 3-3	BC120762|Krtap3-3|66380|keratin associated protein 3-3	AK009410|Krtap3-3|66380|keratin associated protein 3-3	AK010142|Krtap3-3|66380|keratin associated protein 3-3	NM_025524|Krtap3-3|66380|keratin associated protein 3-3	AK009052|Krtap3-3|66380|keratin associated protein 3-3
mm9_v1_chr6_-_50604391_50604439	0.450382	NKX6-1,2.p2	AB040289|Npvf|60531|neuropeptide VF precursor	AF330058|Npvf|60531|neuropeptide VF precursor	NM_021892|Npvf|60531|neuropeptide VF precursor	AK138200|Npvf|60531|neuropeptide VF precursor	BC116905|Npvf|60531|neuropeptide VF precursor	BC116907|Npvf|60531|neuropeptide VF precursor
mm9_v1_chr17_-_34941343_34941505	0.449781	NKX6-1,2.p2	BC127167|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1	NM_009995|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1	AK146565|Cyp21a1|13079|cytochrome P450, family 21, subfamily a, polypeptide 1
mm9_v1_chr10_-_17635007_17635085	0.445457	NKX6-1,2.p2	BC094026|Heca|380629|headcase homolog (Drosophila)	AK134782|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr9_+_117161650_117161701	0.444189	NKX6-1,2.p2	
mm9_v1_chr6_+_57087346_57087346	0.442781	NKX6-1,2.p2	BC104398|Vmn1r11|113860|vomeronasal 1 receptor 11	BC104399|Vmn1r11|113860|vomeronasal 1 receptor 11	NM_053233|Vmn1r11|113860|vomeronasal 1 receptor 11
mm9_v1_chr15_-_73015227_73015327	0.442188	NKX6-1,2.p2	BC128379|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC129922|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	AB081472|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC096465|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2
mm9_v1_chr15_-_102993714_102993747	0.441052	NKX6-1,2.p2	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr18_+_37581071_37581102	0.440991	NKX6-1,2.p2	AK078189|Pcdhb11|93882|protocadherin beta 11	NM_053136|Pcdhb11|93882|protocadherin beta 11	AK160803|Pcdhb11|93882|protocadherin beta 11
mm9_v1_chr10_-_122550401_122550537	0.440149	NKX6-1,2.p2	AK088952|Usp15|14479|ubiquitin specific peptidase 15
mm9_v1_chr9_-_13631343_13631398	0.437589	NKX6-1,2.p2	AY225093|Cep57|74360|centrosomal protein 57	AK028458|Cep57|74360|centrosomal protein 57	AK028408|Cep57|74360|centrosomal protein 57
mm9_v1_chr8_+_4238780_4238837	0.434837	NKX6-1,2.p2	AK165184|Map2k7|26400|mitogen-activated protein kinase kinase 7	BC070467|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060945|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060946|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060947|Map2k7|26400|mitogen-activated protein kinase kinase 7	AK031137|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr6_-_69557773_69557830	0.434832	NKX6-1,2.p2	
mm9_v1_chr6_-_129281770_129281798	0.430052	NKX6-1,2.p2	AK076635|4922502D21Rik|381816|RIKEN cDNA 4922502D21 gene	AK132711|4922502D21Rik|381816|RIKEN cDNA 4922502D21 gene	BC089479|4922502D21Rik|381816|RIKEN cDNA 4922502D21 gene	NM_199034|4922502D21Rik|381816|RIKEN cDNA 4922502D21 gene
mm9_v1_chr1_+_154597680_154597706	0.42921	NKX6-1,2.p2	BC100465|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)	NM_001081197|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)	AK017014|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
mm9_v1_chr18_-_32071556_32071556	0.42875	NKX6-1,2.p2	NM_026006|Sft2d3|67158|SFT2 domain containing 3
mm9_v1_chr7_-_91763744_91763768	0.428121	NKX6-1,2.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr18_-_50728323_50728377	0.427799	NKX6-1,2.p2	AK014922|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	BC048447|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	NM_026108|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	AK007231|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A
mm9_v1_chr18_+_37595274_37595294	0.425927	NKX6-1,2.p2	NM_053137|Pcdhb12|93883|protocadherin beta 12
mm9_v1_chr11_-_63892874_63892978	0.424623	NKX6-1,2.p2	AK213695|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC038046|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC018301|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK149999|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK171661|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK010385|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK154668|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK156865|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK172718|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	NM_178379|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
mm9_v1_chr11_-_4341084_4341105	0.424247	NKX6-1,2.p2	BC120781|Hormad2|75828|HORMA domain containing 2	BC120783|Hormad2|75828|HORMA domain containing 2	BC144842|Hormad2|75828|HORMA domain containing 2	NM_029458|Hormad2|75828|HORMA domain containing 2	AK015939|Hormad2|75828|HORMA domain containing 2
mm9_v1_chr3_+_137880777_137880845	0.423805	NKX6-1,2.p2	AK009588|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AK144795|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	BC047267|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	U20257|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr4_+_116269290_116269349	0.421327	NKX6-1,2.p2	AK029257|Ccdc17|622665|coiled-coil domain containing 17	NM_001037916|Ccdc17|622665|coiled-coil domain containing 17	BC150874|Ccdc17|622665|coiled-coil domain containing 17	BC172023|Ccdc17|622665|coiled-coil domain containing 17
mm9_v1_chr1_-_56694278_56694294	0.421117	NKX6-1,2.p2	AK016803|Hsfy2|71066|heat shock transcription factor, Y linked 2	BC049724|Hsfy2|71066|heat shock transcription factor, Y linked 2	NM_027661|Hsfy2|71066|heat shock transcription factor, Y linked 2
mm9_v1_chr8_-_67542418_67542586	0.420438	NKX6-1,2.p2	AY063496|Trim61|260296|tripartite motif-containing 61	AY063495|Trim61|260296|tripartite motif-containing 61	BC064738|Trim61|260296|tripartite motif-containing 61	BC139468|Trim60|234329|tripartite motif-containing 60	BC139469|Trim60|234329|tripartite motif-containing 60	AK054544|Trim61|260296|tripartite motif-containing 61	AF290197|Trim60|234329|tripartite motif-containing 60	AK135841|Trim60|234329|tripartite motif-containing 60	AK136037|Trim61|260296|tripartite motif-containing 61	NM_001177551|Trim61|260296|tripartite motif-containing 61	NM_153097|Trim60|234329|tripartite motif-containing 60	NM_153110|Trim61|260296|tripartite motif-containing 61
mm9_v1_chr7_+_11273141_11273169	0.4177	NKX6-1,2.p2	AK054426|Nlrp4b|210045|NLR family, pyrin domain containing 4B	AY355342|Nlrp4b|210045|NLR family, pyrin domain containing 4B	NM_172481|Nlrp4b|210045|NLR family, pyrin domain containing 4B	BC066795|Nlrp4b|210045|NLR family, pyrin domain containing 4B
mm9_v1_chr18_-_74367400_74367471	0.416498	NKX6-1,2.p2	AK007138|Ska1|66468|spindle and kinetochore associated complex subunit 1	DQ926863|Ska1|66468|spindle and kinetochore associated complex subunit 1	DQ926864|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK006442|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK013233|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK021226|Ska1|66468|spindle and kinetochore associated complex subunit 1	NM_001164355|Ska1|66468|spindle and kinetochore associated complex subunit 1	NM_025581|Ska1|66468|spindle and kinetochore associated complex subunit 1
mm9_v1_chr10_+_98725871_98725972	0.415756	NKX6-1,2.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr2_+_14096150_14096167	0.414725	NKX6-1,2.p2	AK144489|Fam23a|625286|family with sequence similarity 23, member A	NM_001081310|Fam23a|625286|family with sequence similarity 23, member A
mm9_v1_chr15_+_35301285_35301305	0.412834	NKX6-1,2.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr11_-_97372344_97372370	0.412663	NKX6-1,2.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chrX_+_108009728_108009803	0.411693	NKX6-1,2.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr14_-_8164908_8164908	0.411556	NKX6-1,2.p2	BC090991|Gm5797|545013|predicted gene 5797	NM_001025085|Gm5797|545013|predicted gene 5797
mm9_v1_chr6_-_129610573_129610706	0.410867	NKX6-1,2.p2	AF109785|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	NM_010653|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AK036555|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AF106011|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	NM_001098669|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AK040721|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AF106010|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2
mm9_v1_chr2_-_60589953_60589966	0.40991	NKX6-1,2.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr8_-_72440219_72440255	0.409447	NKX6-1,2.p2	BC031407|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr9_-_71743854_71743929	0.408805	NKX6-1,2.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr10_-_60561786_60561820	0.408717	NKX6-1,2.p2	
mm9_v1_chr6_-_51413182_51413233	0.408435	NKX6-1,2.p2	AK049735|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr1_-_180259336_180259529	0.407657	NKX6-1,2.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr17_-_56724005_56724033	0.407384	NKX6-1,2.p2	NM_001029979|Safb2|224902|scaffold attachment factor B2
mm9_v1_chr7_-_29678773_29678890	0.406175	NKX6-1,2.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr6_-_38074549_38074585	0.405252	NKX6-1,2.p2	AK165464|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AF435090|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK128892|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK143790|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	NM_080467|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4
mm9_v1_chr2_-_9800100_9800104	0.403869	NKX6-1,2.p2	AK157939|Gata3|14462|GATA binding protein 3	AK161099|Gata3|14462|GATA binding protein 3
mm9_v1_chr17_+_35259896_35259930	0.403413	NKX6-1,2.p2	BC120637|Gpank1|81845|G patch domain and ankyrin repeats 1	BC120639|Gpank1|81845|G patch domain and ankyrin repeats 1	NM_032460|Gpank1|81845|G patch domain and ankyrin repeats 1	AB221568|Gpank1|81845|G patch domain and ankyrin repeats 1
mm9_v1_chr9_+_95758015_95758123	0.402174	NKX6-1,2.p2	AK157757|Atr|245000|ataxia telangiectasia and Rad3 related	NM_019864|Atr|245000|ataxia telangiectasia and Rad3 related	AK139834|Atr|245000|ataxia telangiectasia and Rad3 related	AK142244|Atr|245000|ataxia telangiectasia and Rad3 related	AK162661|Atr|245000|ataxia telangiectasia and Rad3 related	AK157754|Atr|245000|ataxia telangiectasia and Rad3 related	AK030118|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	AK171072|Atr|245000|ataxia telangiectasia and Rad3 related	AK170039|Atr|245000|ataxia telangiectasia and Rad3 related	AK135538|Atr|245000|ataxia telangiectasia and Rad3 related
mm9_v1_chr6_-_97409251_97409295	0.40138	NKX6-1,2.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr1_-_93295259_93295297	0.401214	NKX6-1,2.p2	BC027439|Ilkap|67444|integrin-linked kinase-associated serine/threonine phosphatase 2C
mm9_v1_chr6_-_144157971_144158077	0.400675	NKX6-1,2.p2	BC110478|Sox5|20678|SRY-box containing gene 5	AK132307|Sox5|20678|SRY-box containing gene 5	AB006330|Sox5|20678|SRY-box containing gene 5	AJ010604|Sox5|20678|SRY-box containing gene 5	NM_001113559|Sox5|20678|SRY-box containing gene 5	NM_011444|Sox5|20678|SRY-box containing gene 5
mm9_v1_chr5_-_100392845_100392900	0.400519	NKX6-1,2.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr5_+_32541456_32541456	0.399512	NKX6-1,2.p2	AK161095|Plb1|665270|phospholipase B1	NM_001081407|Plb1|665270|phospholipase B1
mm9_v1_chr5_-_137748860_137748870	0.398071	NKX6-1,2.p2	BC066831|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)
mm9_v1_chr2_+_40412520_40412541	0.396948	NKX6-1,2.p2	AK196468|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210662|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr5_-_130214385_130214385	0.396397	NKX6-1,2.p2	NM_028826|Sept14|74222|septin 14
mm9_v1_chr15_-_72891441_72891633	0.395496	NKX6-1,2.p2	AK156739|Trappc9|76510|trafficking protein particle complex 9	AK013485|Trappc9|76510|trafficking protein particle complex 9	AK028504|Trappc9|76510|trafficking protein particle complex 9	AK029106|Trappc9|76510|trafficking protein particle complex 9	AK031788|Trappc9|76510|trafficking protein particle complex 9	AK138682|Trappc9|76510|trafficking protein particle complex 9	BC070463|Trappc9|76510|trafficking protein particle complex 9	NM_001164641|Trappc9|76510|trafficking protein particle complex 9	NM_001164642|Trappc9|76510|trafficking protein particle complex 9	NM_001164643|Trappc9|76510|trafficking protein particle complex 9	NM_180662|Trappc9|76510|trafficking protein particle complex 9
mm9_v1_chr11_+_20443168_20443285	0.394224	NKX6-1,2.p2	AK147674|Sertad2|58172|SERTA domain containing 2	AK142268|Sertad2|58172|SERTA domain containing 2	NM_021372|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr4_-_117438214_117438270	0.39339	NKX6-1,2.p2	BC064748|Klf17|75753|Kruppel-like factor 17	AF508984|Klf17|75753|Kruppel-like factor 17	AK018361|Klf17|75753|Kruppel-like factor 17	AK139827|Klf17|75753|Kruppel-like factor 17	NM_029416|Klf17|75753|Kruppel-like factor 17
mm9_v1_chr7_+_111392998_111393087	0.392921	NKX6-1,2.p2	AK171840|Trim34a|94094|tripartite motif-containing 34A	AK172135|Trim34a|94094|tripartite motif-containing 34A	AF220139|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chrX_-_143838294_143838374	0.392655	NKX6-1,2.p2	BC003723|Il13ra2|16165|interleukin 13 receptor, alpha 2	NM_008356|Il13ra2|16165|interleukin 13 receptor, alpha 2	U65747|Il13ra2|16165|interleukin 13 receptor, alpha 2
mm9_v1_chrX_-_110299092_110299131	0.39189	NKX6-1,2.p2	BC047461|Chm|12662|choroidermia	AK035956|Chm|12662|choroidermia	AK141830|Chm|12662|choroidermia	AF218084|Chm|12662|choroidermia	NM_018818|Chm|12662|choroidermia	AK021238|Chm|12662|choroidermia
mm9_v1_chr4_+_55093796_55093934	0.391068	NKX6-1,2.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr16_+_87553574_87553800	0.390286	NKX6-1,2.p2	AY033899|ORF63|224419|open reading frame 63	NM_144854|ORF63|224419|open reading frame 63	AK041664|ORF63|224419|open reading frame 63	BC115624|ORF63|224419|open reading frame 63	BC115625|ORF63|224419|open reading frame 63
mm9_v1_chr5_+_7304126_7304163	0.388021	NKX6-1,2.p2	BC049718|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK133311|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK014870|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK076678|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	NM_027603|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene
mm9_v1_chr12_-_36944788_36944804	0.387206	NKX6-1,2.p2	AK007140|1700108M19Rik|71156|RIKEN cDNA 1700108M19 gene	NM_027699|1700108M19Rik|71156|RIKEN cDNA 1700108M19 gene	AK077182|1700108M19Rik|71156|RIKEN cDNA 1700108M19 gene
mm9_v1_chr12_-_36883307_36883421	0.387015	NKX6-1,2.p2	BC058796|Bzw2|66912|basic leucine zipper and W2 domains 2	AB244988|Bzw2|66912|basic leucine zipper and W2 domains 2	BC013060|Bzw2|66912|basic leucine zipper and W2 domains 2	AK088108|Bzw2|66912|basic leucine zipper and W2 domains 2	AK132595|Bzw2|66912|basic leucine zipper and W2 domains 2	AK162647|Bzw2|66912|basic leucine zipper and W2 domains 2	AK011253|Bzw2|66912|basic leucine zipper and W2 domains 2	AK160544|Bzw2|66912|basic leucine zipper and W2 domains 2	AK003229|Bzw2|66912|basic leucine zipper and W2 domains 2	NM_025840|Bzw2|66912|basic leucine zipper and W2 domains 2
mm9_v1_chr15_+_102839909_102840036	0.382426	NKX6-1,2.p2	X16511|Hoxc6|15425|homeobox C6	BC028482|Hoxc6|15425|homeobox C6	NM_010465|Hoxc6|15425|homeobox C6	BC141061|Hoxc6|15425|homeobox C6	AB221685|Hoxc6|15425|homeobox C6
mm9_v1_chr1_-_140743779_140743951	0.381268	NKX6-1,2.p2	AB221560|Lhx9|16876|LIM homeobox protein 9	AK013209|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr12_-_74147683_74147691	0.376934	NKX6-1,2.p2	BC023304|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr8_-_27109536_27109553	0.37589	NKX6-1,2.p2	
mm9_v1_chr10_+_73284612_73284690	0.373027	NKX6-1,2.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr3_-_92289795_92289819	0.371086	NKX6-1,2.p2	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr1_-_13117243_13117243	0.369392	NKX6-1,2.p2	AK134292|Prdm14|383491|PR domain containing 14	NM_001081209|Prdm14|383491|PR domain containing 14
mm9_v1_chr3_+_95363598_95363600	0.366505	NKX6-1,2.p2	AK016743|Hormad1|67981|HORMA domain containing 1	NM_026489|Hormad1|67981|HORMA domain containing 1	BC051129|Hormad1|67981|HORMA domain containing 1	AK014945|Hormad1|67981|HORMA domain containing 1	AK016324|Hormad1|67981|HORMA domain containing 1	AK163995|Hormad1|67981|HORMA domain containing 1	AY626343|Hormad1|67981|HORMA domain containing 1	AY634284|Hormad1|67981|HORMA domain containing 1
mm9_v1_chr5_+_120120870_120121055	0.366414	NKX6-1,2.p2	BC096551|Tbx3|21386|T-box 3	AK052453|Tbx3|21386|T-box 3
mm9_v1_chr7_+_116084192_116084237	0.364002	NKX6-1,2.p2	
mm9_v1_chr11_-_107209443_107209486	0.363422	NKX6-1,2.p2	AK021206|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr8_-_84927109_84927120	0.362349	NKX6-1,2.p2	AK085441|Il15|16168|interleukin 15	AK155616|Il15|16168|interleukin 15
mm9_v1_chr4_+_154932761_154932805	0.362316	NKX6-1,2.p2	AK194739|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK203879|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK205062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr15_-_99609351_99609491	0.362192	NKX6-1,2.p2	AK003890|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr3_+_52153283_52153283	0.360266	NKX6-1,2.p2	AK054289|Foxo1|56458|forkhead box O1
mm9_v1_chr15_+_96117952_96118007	0.359428	NKX6-1,2.p2	AK007269|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)	NM_175251|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr10_-_117252126_117252166	0.359416	NKX6-1,2.p2	
mm9_v1_chrX_-_6618729_6618744	0.358769	NKX6-1,2.p2	AJ555465|Ccnb3|209091|cyclin B3	AJ555464|Ccnb3|209091|cyclin B3	NM_183015|Ccnb3|209091|cyclin B3
mm9_v1_chr13_-_98669545_98669547	0.35546	NKX6-1,2.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr1_+_21339757_21339831	0.354332	NKX6-1,2.p2	NM_183322|Khdc1a|368204|KH domain containing 1A	AK136166|Khdc1a|368204|KH domain containing 1A
mm9_v1_chr3_+_138078450_138078473	0.353055	NKX6-1,2.p2	AK132994|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_011996|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	AJ245750|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100729|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100736|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100730|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide
mm9_v1_chr13_-_27734332_27734361	0.352416	NKX6-1,2.p2	AF020525|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AF011381|Prl7a1|19113|prolactin family 7, subfamily a, member 1	BC051671|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK028371|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK141309|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK146050|Prl7a1|19113|prolactin family 7, subfamily a, member 1	NM_001164058|Prl7a1|19113|prolactin family 7, subfamily a, member 1	NM_008930|Prl7a1|19113|prolactin family 7, subfamily a, member 1
mm9_v1_chr12_-_60305853_60305917	0.352076	NKX6-1,2.p2	BC006669|Fbxo33|70611|F-box protein 33
mm9_v1_chr4_-_94316806_94316834	0.350967	NKX6-1,2.p2	BC061228|Lrrc19|100061|leucine rich repeat containing 19	AK033594|Lrrc19|100061|leucine rich repeat containing 19	NM_175305|Lrrc19|100061|leucine rich repeat containing 19
mm9_v1_chr11_-_83462722_83462879	0.350714	NKX6-1,2.p2	AK153155|Ccl3|20302|chemokine (C-C motif) ligand 3	EU366956|Ccl3|20302|chemokine (C-C motif) ligand 3	BC111443|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065939|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065940|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065941|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065942|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065943|Ccl3|20302|chemokine (C-C motif) ligand 3	J04491|Ccl3|20302|chemokine (C-C motif) ligand 3	X12531|Ccl3|20302|chemokine (C-C motif) ligand 3	M23447|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150590|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150634|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150698|Ccl3|20302|chemokine (C-C motif) ligand 3	AK151581|Ccl3|20302|chemokine (C-C motif) ligand 3	AK152648|Ccl3|20302|chemokine (C-C motif) ligand 3	AK155058|Ccl3|20302|chemokine (C-C motif) ligand 3	NM_011337|Ccl3|20302|chemokine (C-C motif) ligand 3
mm9_v1_chr8_+_94190341_94190551	0.349644	NKX6-1,2.p2	
mm9_v1_chr10_-_80380806_80381016	0.348304	NKX6-1,2.p2	AK180471|Lmnb2|16907|lamin B2	X54098|Lmnb2|16907|lamin B2	BC051985|Lmnb2|16907|lamin B2	BC042430|Lmnb2|16907|lamin B2	NM_010722|Lmnb2|16907|lamin B2
mm9_v1_chr2_-_155979971_155980032	0.34749	NKX6-1,2.p2	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr3_-_93982114_93982114	0.345181	NKX6-1,2.p2	AK139538|Gm10696|100043188|predicted gene 10696	NM_001146107|Gm10696|100043188|predicted gene 10696
mm9_v1_chr10_+_101837068_101837081	0.344154	NKX6-1,2.p2	AK018672|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK033482|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_026243|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK018574|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	BC046987|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr7_+_77509969_77510044	0.343796	NKX6-1,2.p2	BC070425|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr5_-_123496828_123496828	0.343749	NKX6-1,2.p2	BC019987|Morn3|74890|MORN repeat containing 3	NM_029112|Morn3|74890|MORN repeat containing 3
mm9_v1_chr10_-_88875526_88875657	0.343601	NKX6-1,2.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr11_+_67611772_67611789	0.343126	NKX6-1,2.p2	NM_001013013|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	AK003267|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	BC039565|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C
mm9_v1_chr10_+_99803471_99803471	0.342246	NKX6-1,2.p2	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr10_-_85474581_85474639	0.341563	NKX6-1,2.p2	BC112376|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK028764|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	NM_177772|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK132518|Bpil2|270757|bactericidal/permeability-increasing protein-like 2
mm9_v1_chr15_-_57309179_57309179	0.340814	NKX6-1,2.p2	AK030222|BC026439|210463|cDNA sequence BC026439	NM_172378|BC026439|210463|cDNA sequence BC026439
mm9_v1_chr4_-_88238283_88238288	0.340804	NKX6-1,2.p2	BC117775|Ifna9|15972|interferon alpha 9	BC117774|Ifna6|15969|interferon alpha 6	NM_010507|Ifna9|15972|interferon alpha 9
mm9_v1_chr7_+_140175699_140175731	0.339066	NKX6-1,2.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr8_+_97381349_97381467	0.33895	NKX6-1,2.p2	NM_009090|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	BC099548|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	AK160053|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	AK137796|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	AK146763|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	AK151270|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	D83999|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C	BC002023|Polr2c|20021|polymerase (RNA) II (DNA directed) polypeptide C
mm9_v1_chr5_+_91456489_91456542	0.338788	NKX6-1,2.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr9_-_36540210_36540345	0.337587	NKX6-1,2.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr14_-_104921839_104921882	0.337249	NKX6-1,2.p2	BC029231|Rnf219|72486|ring finger protein 219	AK020974|Rnf219|72486|ring finger protein 219	AK013314|Rnf219|72486|ring finger protein 219	NM_026047|Rnf219|72486|ring finger protein 219
mm9_v1_chr11_-_99949426_99949428	0.335149	NKX6-1,2.p2	BC118064|Krt32|16670|keratin 32	BC117553|Krt32|16670|keratin 32	NM_001159374|Krt32|16670|keratin 32	X75649|Krt32|16670|keratin 32
mm9_v1_chr3_-_10197187_10197261	0.334065	NKX6-1,2.p2	AK161314|Fabp9|21884|fatty acid binding protein 9, testis	AK005745|Fabp9|21884|fatty acid binding protein 9, testis	BC048437|Fabp9|21884|fatty acid binding protein 9, testis	NM_011598|Fabp9|21884|fatty acid binding protein 9, testis
mm9_v1_chr7_-_30691111_30691122	0.330925	NKX6-1,2.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr6_-_72382995_72383001	0.330129	NKX6-1,2.p2	
mm9_v1_chr18_-_42356324_42356362	0.329046	NKX6-1,2.p2	BC110558|Plac8l1|69401|PLAC8-like 1	BC110559|Plac8l1|69401|PLAC8-like 1	AK006002|Plac8l1|69401|PLAC8-like 1	AK005800|Plac8l1|69401|PLAC8-like 1	NM_027072|Plac8l1|69401|PLAC8-like 1
mm9_v1_chr2_+_177493957_177493997	0.328088	NKX6-1,2.p2	BC092145|Gm14322|626802|predicted gene 14322
mm9_v1_chr9_+_46081146_46081375	0.326498	NKX6-1,2.p2	NM_011752|Zfp259|22687|zinc finger protein 259	AK158995|Zfp259|22687|zinc finger protein 259	AK170372|Zfp259|22687|zinc finger protein 259	AK044472|Zfp259|22687|zinc finger protein 259	AB041612|Zfp259|22687|zinc finger protein 259	BC021397|Zfp259|22687|zinc finger protein 259	AK167849|Zfp259|22687|zinc finger protein 259	AK168061|Zfp259|22687|zinc finger protein 259	AK215085|Zfp259|22687|zinc finger protein 259
mm9_v1_chr17_+_21625972_21626045	0.325497	NKX6-1,2.p2	BC020362|Zfp53|24132|zinc finger protein 53
mm9_v1_chr11_+_11389268_11389268	0.324157	NKX6-1,2.p2	AK015144|4930415F15Rik|73862|RIKEN cDNA 4930415F15 gene	NM_028669|4930415F15Rik|73862|RIKEN cDNA 4930415F15 gene
mm9_v1_chr16_-_88885333_88885333	0.321108	NKX6-1,2.p2	AF345294|Krtap16-4|170654|keratin associated protein 16-4	BC116200|Krtap16-4|170654|keratin associated protein 16-4	BC116201|Krtap16-4|170654|keratin associated protein 16-4	NM_130873|Krtap16-4|170654|keratin associated protein 16-4
mm9_v1_chrX_+_73509642_73509644	0.320923	NKX6-1,2.p2	BC048515|Gm4937|238829|predicted gene 4937	NM_001013760|Gm4937|238829|predicted gene 4937
mm9_v1_chr2_-_181333786_181333936	0.320547	NKX6-1,2.p2	AK053884|Samd10|229011|sterile alpha motif domain containing 10	AK053048|Samd10|229011|sterile alpha motif domain containing 10	BC052921|Samd10|229011|sterile alpha motif domain containing 10	NM_172676|Samd10|229011|sterile alpha motif domain containing 10	AK171151|Samd10|229011|sterile alpha motif domain containing 10	BC019475|Samd10|229011|sterile alpha motif domain containing 10	AK164204|Samd10|229011|sterile alpha motif domain containing 10
mm9_v1_chr6_+_89593981_89593999	0.319922	NKX6-1,2.p2	AK041046|Txnrd3|232223|thioredoxin reductase 3	NM_001178058|Txnrd3|232223|thioredoxin reductase 3	NM_001178059|Txnrd3|232223|thioredoxin reductase 3	NM_001178060|Txnrd3|232223|thioredoxin reductase 3	NM_153162|Txnrd3|232223|thioredoxin reductase 3	AK012699|Txnrd3|232223|thioredoxin reductase 3	AK080362|Txnrd3|232223|thioredoxin reductase 3	AK134987|Txnrd3|232223|thioredoxin reductase 3
mm9_v1_chr18_+_21230844_21230846	0.318465	NKX6-1,2.p2	AK098127|Mep1b|17288|meprin 1 beta	L15193|Mep1b|17288|meprin 1 beta	NM_008586|Mep1b|17288|meprin 1 beta	BC145979|Mep1b|17288|meprin 1 beta	BC125627|Mep1b|17288|meprin 1 beta
mm9_v1_chr14_-_79647102_79647173	0.315263	NKX6-1,2.p2	AK139686|Zfp957|105590|zinc finger protein 957	NM_001033215|Zfp957|105590|zinc finger protein 957
mm9_v1_chr11_-_86900256_86900280	0.31182	NKX6-1,2.p2	AK004714|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene	BC020005|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene	NM_024262|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene
mm9_v1_chr7_+_148127289_148127427	0.310692	NKX6-1,2.p2	AK171694|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr2_-_65405546_65405588	0.310622	NKX6-1,2.p2	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr7_+_30569807_30569808	0.309065	NKX6-1,2.p2	BC049120|Zfp30|22693|zinc finger protein 30	AY605122|Zfp30|22693|zinc finger protein 30	NM_013705|Zfp30|22693|zinc finger protein 30	Z30174|Zfp30|22693|zinc finger protein 30
mm9_v1_chr14_+_3500819_3500830	0.308779	NKX6-1,2.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_3740222_3740233	0.308779	NKX6-1,2.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_6956219_6956230	0.308779	NKX6-1,2.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr15_+_84770146_84770307	0.308421	NKX6-1,2.p2	AK197009|Nup50|18141|nucleoporin 50
mm9_v1_chr6_+_89594017_89594072	0.307879	NKX6-1,2.p2	BC076605|Txnrd3|232223|thioredoxin reductase 3	AK135794|Txnrd3|232223|thioredoxin reductase 3	AF349659|Txnrd3|232223|thioredoxin reductase 3
mm9_v1_chr19_-_41289045_41289143	0.305971	NKX6-1,2.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr15_-_79158357_79158407	0.305375	NKX6-1,2.p2	BC057209|Pla2g6|53357|phospholipase A2, group VI	AK183678|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr1_-_140744146_140744155	0.305105	NKX6-1,2.p2	AF134761|Lhx9|16876|LIM homeobox protein 9	AJ243851|Lhx9|16876|LIM homeobox protein 9	NM_010714|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr13_-_23853025_23853117	0.301333	NKX6-1,2.p2	NM_178192|Hist1h4a|326619|histone cluster 1, H4a	AK016310|Hist1h4a|326619|histone cluster 1, H4a	BC119241|Hist1h4a|326619|histone cluster 1, H4a	BC119243|Hist1h4a|326619|histone cluster 1, H4a
mm9_v1_chr18_+_3435267_3435359	0.300521	NKX6-1,2.p2	AK162910|Cul2|71745|cullin 2
mm9_v1_chr13_-_108516475_108516490	0.300058	NKX6-1,2.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr17_-_37004131_37004154	0.297816	NKX6-1,2.p2	BC027186|Trim15|69097|tripartite motif-containing 15	NM_001024134|Trim15|69097|tripartite motif-containing 15	AK007445|Trim15|69097|tripartite motif-containing 15	NM_001177872|Trim15|69097|tripartite motif-containing 15
mm9_v1_chr10_-_4707228_4707322	0.297691	NKX6-1,2.p2	BC089511|Vip|22353|vasoactive intestinal polypeptide	AK018599|Vip|22353|vasoactive intestinal polypeptide	NM_011702|Vip|22353|vasoactive intestinal polypeptide
mm9_v1_chr14_-_60845511_60845640	0.297328	NKX6-1,2.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr11_-_82804594_82804643	0.296488	NKX6-1,2.p2	AK050355|Slfn9|237886|schlafen 9
mm9_v1_chr11_-_105318037_105318048	0.293289	NKX6-1,2.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr8_+_4238862_4238907	0.292543	NKX6-1,2.p2	AB005654|Map2k7|26400|mitogen-activated protein kinase kinase 7	AK028772|Map2k7|26400|mitogen-activated protein kinase kinase 7	U74463|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr3_-_20266045_20266098	0.290718	NKX6-1,2.p2	BC109153|Agtr1b|11608|angiotensin II receptor, type 1b	AK087228|Agtr1b|11608|angiotensin II receptor, type 1b	NM_175086|Agtr1b|11608|angiotensin II receptor, type 1b
mm9_v1_chr12_+_75398460_75398460	0.29046	NKX6-1,2.p2	NM_198866|Dbpht2|386753|DNA binding protein with his-thr domain
mm9_v1_chr10_+_99798309_99798309	0.290054	NKX6-1,2.p2	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr5_-_65844386_65844460	0.290026	NKX6-1,2.p2	BC029314|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chr19_+_46227052_46227083	0.289345	NKX6-1,2.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr2_+_119456102_119456195	0.289293	NKX6-1,2.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr3_+_92736900_92736917	0.287815	NKX6-1,2.p2	AK009001|Lce3b|66344|late cornified envelope 3B	AK009201|Lce3b|66344|late cornified envelope 3B	NM_025501|Lce3b|66344|late cornified envelope 3B	BC115788|Lce3b|66344|late cornified envelope 3B	BC115817|Lce3b|66344|late cornified envelope 3B	BC059084|Lce3b|66344|late cornified envelope 3B
mm9_v1_chr2_+_121282841_121282867	0.287431	NKX6-1,2.p2	AK168506|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC021588|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr18_+_37170365_37170627	0.287253	NKX6-1,2.p2	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr10_-_126748757_126748841	0.285001	NKX6-1,2.p2	NM_001003913|Mars|216443|methionine-tRNA synthetase	NM_001171582|Mars|216443|methionine-tRNA synthetase
mm9_v1_chr6_-_3349415_3349463	0.284791	NKX6-1,2.p2	AK172649|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr13_-_4522566_4522580	0.28433	NKX6-1,2.p2	AB097220|Akr1c20|116852|aldo-keto reductase family 1, member C20	BC021607|Akr1c20|116852|aldo-keto reductase family 1, member C20	AK012162|Akr1c20|116852|aldo-keto reductase family 1, member C20	NM_054080|Akr1c20|116852|aldo-keto reductase family 1, member C20
mm9_v1_chr6_-_35258102_35258131	0.28333	NKX6-1,2.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chrX_+_136916509_136916509	0.28283	NKX6-1,2.p2	AK047241|Frmpd3|245643|FERM and PDZ domain containing 3	NM_177750|Frmpd3|245643|FERM and PDZ domain containing 3
mm9_v1_chr6_-_40890495_40890555	0.282358	NKX6-1,2.p2	AK006951|1700074P13Rik|73481|RIKEN cDNA 1700074P13 gene	BC061035|1700074P13Rik|73481|RIKEN cDNA 1700074P13 gene	AK030264|1700074P13Rik|73481|RIKEN cDNA 1700074P13 gene	NM_028550|1700074P13Rik|73481|RIKEN cDNA 1700074P13 gene
mm9_v1_chr1_+_191552133_191552202	0.282165	NKX6-1,2.p2	AK037646|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	NM_008976|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	AK086524|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	AK028783|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14
mm9_v1_chr14_+_56372605_56372670	0.280323	NKX6-1,2.p2	AK208092|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr8_-_75090050_75090196	0.280046	NKX6-1,2.p2	AK215124|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK217818|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK207517|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr4_-_120624286_120624305	0.279856	NKX6-1,2.p2	NM_001005788|Zfp69|381549|zinc finger protein 69
mm9_v1_chr18_+_59222034_59222186	0.279595	NKX6-1,2.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr19_-_44266763_44266931	0.278693	NKX6-1,2.p2	AB290927|Pkd2l1|329064|polycystic kidney disease 2-like 1	BC116297|Pkd2l1|329064|polycystic kidney disease 2-like 1	BC116323|Pkd2l1|329064|polycystic kidney disease 2-like 1	AF271381|Pkd2l1|329064|polycystic kidney disease 2-like 1	AK046772|Pkd2l1|329064|polycystic kidney disease 2-like 1	NM_181422|Pkd2l1|329064|polycystic kidney disease 2-like 1
mm9_v1_chr13_-_55672471_55672500	0.278349	NKX6-1,2.p2	AK155237|Fam193b|212483|family with sequence similarity 193, member B	NM_145382|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr10_-_99845190_99845193	0.276406	NKX6-1,2.p2	BC158090|Gm4303|100043231|predicted gene 4303	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr3_-_144347983_144348061	0.272262	NKX6-1,2.p2	
mm9_v1_chr18_+_35750071_35750097	0.271891	NKX6-1,2.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr17_+_18435244_18435244	0.271478	NKX6-1,2.p2	NM_001104542|Vmn2r93|627132|vomeronasal 2, receptor 93
mm9_v1_chr1_-_34617764_34617802	0.271453	NKX6-1,2.p2	AB008911|Prss40|21756|protease, serine, 40	AK132909|Prss40|21756|protease, serine, 40	NM_009356|Prss40|21756|protease, serine, 40	BC145989|Prss40|21756|protease, serine, 40
mm9_v1_chr2_-_118375365_118375421	0.271064	NKX6-1,2.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr18_+_37673305_37673473	0.270149	NKX6-1,2.p2	AK134846|Pcdhb21|93892|protocadherin beta 21	NM_053146|Pcdhb21|93892|protocadherin beta 21	BC138121|Pcdhb21|93892|protocadherin beta 21	BC138122|Pcdhb21|93892|protocadherin beta 21	AF326314|Pcdhb21|93892|protocadherin beta 21	AY013783|Pcdhb21|93892|protocadherin beta 21
mm9_v1_chr8_+_4238838_4238860	0.265756	NKX6-1,2.p2	AK049267|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr5_-_52541869_52541943	0.264702	NKX6-1,2.p2	AK208682|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr3_+_41359653_41359655	0.264576	NKX6-1,2.p2	AK049332|Phf17|269424|PHD finger protein 17	NM_001130184|Phf17|269424|PHD finger protein 17
mm9_v1_chr11_-_101032604_101032630	0.264048	NKX6-1,2.p2	BC020025|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	NM_146030|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	AK154510|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	AK164128|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr1_+_74438139_74438172	0.264037	NKX6-1,2.p2	AY028804|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr2_-_128769687_128769755	0.263297	NKX6-1,2.p2	BC048687|Zc3h8|57432|zinc finger CCCH type containing 8	AK132679|Zc3h8|57432|zinc finger CCCH type containing 8	AK164491|Zc3h8|57432|zinc finger CCCH type containing 8	AF061961|Zc3h8|57432|zinc finger CCCH type containing 8	AK021376|Zc3h8|57432|zinc finger CCCH type containing 8	NM_020594|Zc3h8|57432|zinc finger CCCH type containing 8
mm9_v1_chr5_-_122907269_122907331	0.263218	NKX6-1,2.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr5_+_53174293_53174344	0.261874	NKX6-1,2.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr13_-_3944594_3944594	0.261288	NKX6-1,2.p2	AK148451|Ucn3|83428|urocortin 3	NM_031250|Ucn3|83428|urocortin 3
mm9_v1_chr13_+_101439309_101439435	0.261064	NKX6-1,2.p2	NM_001168386|Ccdc125|76041|coiled-coil domain containing 125	NM_183115|Ccdc125|76041|coiled-coil domain containing 125
mm9_v1_chr4_-_87452140_87452217	0.260842	NKX6-1,2.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr12_-_52849709_52849723	0.260695	NKX6-1,2.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr6_-_136783899_136783972	0.258757	NKX6-1,2.p2	AK047766|C030030A07Rik|654818|RIKEN cDNA C030030A07 gene	AK045581|C030030A07Rik|654818|RIKEN cDNA C030030A07 gene	NM_001039558|C030030A07Rik|654818|RIKEN cDNA C030030A07 gene	AK078719|C030030A07Rik|654818|RIKEN cDNA C030030A07 gene
mm9_v1_chr4_+_126800830_126800906	0.258655	NKX6-1,2.p2	BC060297|Zmym6|100177|zinc finger, MYM-type 6
mm9_v1_chr3_-_72861724_72861729	0.25666	NKX6-1,2.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr7_+_5626844_5626923	0.256202	NKX6-1,2.p2	BC147681|Vmn1r62|81016|vomeronasal 1 receptor 62	BC147684|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_001167567|Vmn1r186|100039479|vomeronasal 1 receptor Vmn1r186
mm9_v1_chr13_-_55201655_55201679	0.25539	NKX6-1,2.p2	AK052704|Uimc1|20184|ubiquitin interaction motif containing 1	NM_011307|Uimc1|20184|ubiquitin interaction motif containing 1	AK078206|Uimc1|20184|ubiquitin interaction motif containing 1	AK161177|Uimc1|20184|ubiquitin interaction motif containing 1	AK160926|Uimc1|20184|ubiquitin interaction motif containing 1
mm9_v1_chr18_-_55149819_55149833	0.253938	NKX6-1,2.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr9_-_35419452_35419469	0.252639	NKX6-1,2.p2	AK020540|Pate4|56872|prostate and testis expressed 4	BC120764|Pate4|56872|prostate and testis expressed 4	BC120766|Pate4|56872|prostate and testis expressed 4	NM_020264|Pate4|56872|prostate and testis expressed 4
mm9_v1_chr16_-_58826586_58826586	0.252605	NKX6-1,2.p2	NM_147002|Olfr175-ps1|259004|olfactory receptor 175, pseudogene 1
mm9_v1_chr9_-_35419430_35419434	0.249894	NKX6-1,2.p2	AF134204|Pate4|56872|prostate and testis expressed 4
mm9_v1_chr18_-_84255781_84255953	0.247359	NKX6-1,2.p2	BC040215|Tshz1|110796|teashirt zinc finger family member 1	AK220545|Tshz1|110796|teashirt zinc finger family member 1	AK152140|Tshz1|110796|teashirt zinc finger family member 1	NM_001081300|Tshz1|110796|teashirt zinc finger family member 1
mm9_v1_chr18_+_63158808_63158850	0.246055	NKX6-1,2.p2	AK217399|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr2_+_59192308_59192366	0.244089	NKX6-1,2.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr2_+_152106052_152106158	0.244016	NKX6-1,2.p2	AK042898|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr4_+_116269256_116269264	0.243176	NKX6-1,2.p2	AK076542|Ccdc17|622665|coiled-coil domain containing 17
mm9_v1_chr10_+_99829132_99829132	0.241017	NKX6-1,2.p2	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr7_+_13914668_13914694	0.240904	NKX6-1,2.p2	AK136143|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK162196|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK136098|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	NM_001004762|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK145339|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AY694793|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC138548|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC145767|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)
mm9_v1_chr7_-_89796961_89797037	0.238852	NKX6-1,2.p2	AK007285|Fam154b|330577|family with sequence similarity 154, member B	AK007315|Fam154b|330577|family with sequence similarity 154, member B	AK051095|Fam154b|330577|family with sequence similarity 154, member B	AK038727|Fam154b|330577|family with sequence similarity 154, member B	NM_177894|Fam154b|330577|family with sequence similarity 154, member B
mm9_v1_chr14_+_5153653_5153668	0.238221	NKX6-1,2.p2	NM_175393|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene	AK076920|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene
mm9_v1_chr8_-_73421336_73421350	0.237541	NKX6-1,2.p2	NM_029751|Rpl18a|76808|ribosomal protein L18A
mm9_v1_chr4_-_116855158_116855228	0.237496	NKX6-1,2.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr9_-_115152895_115153139	0.230916	NKX6-1,2.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr17_+_86577946_86578063	0.230794	NKX6-1,2.p2	
mm9_v1_chr11_-_86900220_86900252	0.230599	NKX6-1,2.p2	AK031106|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene
mm9_v1_chr8_+_111482660_111482698	0.229727	NKX6-1,2.p2	AK031741|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chrX_+_72661966_72662056	0.228887	NKX6-1,2.p2	NM_001166457|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_001166459|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_145956|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	S68022|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK149844|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK028483|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK030736|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC021313|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK038919|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK011876|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC048179|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3
mm9_v1_chr10_-_44178372_44178385	0.227816	NKX6-1,2.p2	AK149344|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr1_-_184271729_184271762	0.227492	NKX6-1,2.p2	BC094542|Fbxo28|67948|F-box protein 28	NM_175127|Fbxo28|67948|F-box protein 28	AK076211|Fbxo28|67948|F-box protein 28	AK077653|Fbxo28|67948|F-box protein 28
mm9_v1_chr12_+_85983845_85983845	0.226938	NKX6-1,2.p2	BC103771|Vrtn|432677|vertebrae development homolog (pig)	NM_001033776|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr5_+_138575144_138575283	0.226581	NKX6-1,2.p2	
mm9_v1_chr13_+_95558851_95558906	0.22579	NKX6-1,2.p2	AK140276|Tbca|21371|tubulin cofactor A	BC087931|Tbca|21371|tubulin cofactor A	AK010859|Tbca|21371|tubulin cofactor A	BC055749|Tbca|21371|tubulin cofactor A	AK151218|Tbca|21371|tubulin cofactor A	AK168296|Tbca|21371|tubulin cofactor A	NM_009321|Tbca|21371|tubulin cofactor A	U05333|Tbca|21371|tubulin cofactor A	BC051475|Tbca|21371|tubulin cofactor A	BC034267|Tbca|21371|tubulin cofactor A
mm9_v1_chr11_-_116711807_116712035	0.22564	NKX6-1,2.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr16_-_96413824_96413863	0.22499	NKX6-1,2.p2	AK031481|Lca5l|385668|Leber congenital amaurosis 5-like	AK029554|Lca5l|385668|Leber congenital amaurosis 5-like	AK133316|Lca5l|385668|Leber congenital amaurosis 5-like	NM_001001492|Lca5l|385668|Leber congenital amaurosis 5-like
mm9_v1_chr2_+_163264188_163264268	0.224656	NKX6-1,2.p2	NM_144891|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK164991|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK140488|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK141371|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	BC019941|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1
mm9_v1_chr13_-_58456221_58456222	0.224346	NKX6-1,2.p2	BC116646|Kif27|75050|kinesin family member 27	NM_175214|Kif27|75050|kinesin family member 27
mm9_v1_chr19_+_8665743_8665780	0.223973	NKX6-1,2.p2	NM_001164634|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	NM_031194|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK031962|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr10_+_42398721_42398783	0.22136	NKX6-1,2.p2	AK044897|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AF533890|Ostm1|14628|osteopetrosis associated transmembrane protein 1	NM_172416|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK004546|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK050513|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK053664|Ostm1|14628|osteopetrosis associated transmembrane protein 1	BC057635|Ostm1|14628|osteopetrosis associated transmembrane protein 1
mm9_v1_chr2_+_122310676_122310676	0.220717	NKX6-1,2.p2	NM_001085518|Gm14085|381417|predicted gene 14085
mm9_v1_chr18_+_69843588_69843609	0.220409	NKX6-1,2.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr17_+_3482314_3482460	0.220282	NKX6-1,2.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr1_-_90102270_90102322	0.21859	NKX6-1,2.p2	AK005690|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	AK005688|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	BC048490|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_008299|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	U95607|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3
mm9_v1_chr1_-_183111470_183111575	0.218292	NKX6-1,2.p2	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr5_+_140895245_140895309	0.2178	NKX6-1,2.p2	AK033722|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK170938|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	NM_133916|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK167618|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK089978|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC031704|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC023767|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC051065|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B
mm9_v1_chr1_+_89652645_89652774	0.217626	NKX6-1,2.p2	AK030983|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	NM_029846|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK145673|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK155358|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK163246|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK170073|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	BC049122|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK048873|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK005181|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087879|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087880|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087881|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chrM_-_13886_13905	0.216803	NKX6-1,2.p2	
mm9_v1_chr19_+_55255374_55255445	0.214398	NKX6-1,2.p2	NM_009348|Tectb|21684|tectorin beta	X99806|Tectb|21684|tectorin beta	BC138888|Tectb|21684|tectorin beta	BC138889|Tectb|21684|tectorin beta
mm9_v1_chr6_+_134590957_134591017	0.214093	NKX6-1,2.p2	NM_026371|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)	BC023059|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)
mm9_v1_chr17_-_31335918_31335919	0.21379	NKX6-1,2.p2	NM_001163776|Tmprss3|140765|transmembrane protease, serine 3	AK158203|Tmprss3|140765|transmembrane protease, serine 3
mm9_v1_chrX_-_131011028_131011028	0.213053	NKX6-1,2.p2	AK017109|Taf7l|74469|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_028958|Taf7l|74469|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr4_-_112447424_112447470	0.212775	NKX6-1,2.p2	EF494906|Skint10|230613|selection and upkeep of intraepithelial T cells 10	EF494905|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK037152|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK042291|Skint10|230613|selection and upkeep of intraepithelial T cells 10	NM_177668|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK040044|Skint10|230613|selection and upkeep of intraepithelial T cells 10
mm9_v1_chr6_+_146754051_146754051	0.211161	NKX6-1,2.p2	AY005163|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	AY014836|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108965|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108966|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ322241|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ355143|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	NM_172309|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2
mm9_v1_chr3_+_53267715_53267853	0.210235	NKX6-1,2.p2	AK087909|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK038404|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	NM_173382|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK012908|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK161440|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr6_+_134591028_134591136	0.21022	NKX6-1,2.p2	AK018019|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)	AK169615|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)	AK151342|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)	AK089648|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)	AK007423|Loh12cr1|67774|loss of heterozygosity, 12, chromosomal region 1 homolog (human)
mm9_v1_chr13_+_46369073_46369089	0.209694	NKX6-1,2.p2	BC064117|Gm1574|380842|predicted gene 1574	NM_001005422|Gm1574|380842|predicted gene 1574
mm9_v1_chr3_+_84756090_84756352	0.209524	NKX6-1,2.p2	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr3_-_142456600_142456910	0.209505	NKX6-1,2.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr6_+_57183432_57183432	0.208123	NKX6-1,2.p2	NM_053237|Vmn1r14|113864|vomeronasal 1 receptor 14
mm9_v1_chr9_-_78326621_78326646	0.208107	NKX6-1,2.p2	AK199391|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210662|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK196468|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr5_-_87997908_87998005	0.208025	NKX6-1,2.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr18_-_9282615_9282806	0.207738	NKX6-1,2.p2	AJ414562|Gjd4|225152|gap junction protein, delta 4	AK053016|Gjd4|225152|gap junction protein, delta 4	BC137984|Gjd4|225152|gap junction protein, delta 4	AK034663|Gjd4|225152|gap junction protein, delta 4	NM_153086|Gjd4|225152|gap junction protein, delta 4
mm9_v1_chr11_+_67051530_67051557	0.206786	NKX6-1,2.p2	NM_010855|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066419|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ233297|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr3_+_142428186_142428231	0.205343	NKX6-1,2.p2	AK146223|Gtf2b|229906|general transcription factor IIB	AK131856|Gtf2b|229906|general transcription factor IIB	AK133097|Gtf2b|229906|general transcription factor IIB	AK133825|Gtf2b|229906|general transcription factor IIB	AK143935|Gtf2b|229906|general transcription factor IIB	AK145403|Gtf2b|229906|general transcription factor IIB	AK146666|Gtf2b|229906|general transcription factor IIB	AK146910|Gtf2b|229906|general transcription factor IIB	AK151577|Gtf2b|229906|general transcription factor IIB	BC016637|Gtf2b|229906|general transcription factor IIB	NM_145546|Gtf2b|229906|general transcription factor IIB
mm9_v1_chr15_-_76205367_76205367	0.203955	NKX6-1,2.p2	AK007032|Tssk5|73542|testis-specific serine kinase 5	NM_183099|Tssk5|73542|testis-specific serine kinase 5
mm9_v1_chr4_-_91042997_91043190	0.203031	NKX6-1,2.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr11_+_3558702_3558702	0.202845	NKX6-1,2.p2	BC059243|Morc2a|74522|microrchidia 2A	NM_198162|Morc2a|74522|microrchidia 2A
mm9_v1_chr7_-_22086485_22086485	0.20076	NKX6-1,2.p2	NM_001166838|Vmn1r126|100043013|vomeronasal 1 receptor 126	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr17_-_23736453_23736453	0.19877	NKX6-1,2.p2	AK030240|Zfp13|22654|zinc finger protein 13	NM_011747|Zfp13|22654|zinc finger protein 13
mm9_v1_chr7_+_6173879_6173879	0.198174	NKX6-1,2.p2	AK139659|Zscan5b|170734|zinc finger and SCAN domain containing 5B	NM_133204|Zscan5b|170734|zinc finger and SCAN domain containing 5B
mm9_v1_chr3_+_94641626_94641643	0.196053	NKX6-1,2.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr6_+_114593104_114593174	0.195698	NKX6-1,2.p2	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chr11_+_115794942_115794982	0.194205	NKX6-1,2.p2	AK147869|Sap30bp|57230|SAP30 binding protein	AK012245|Sap30bp|57230|SAP30 binding protein	BC021757|Sap30bp|57230|SAP30 binding protein	NM_020483|Sap30bp|57230|SAP30 binding protein	X68061|Sap30bp|57230|SAP30 binding protein
mm9_v1_chr1_+_173144098_173144105	0.193172	NKX6-1,2.p2	AK133515|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	NM_009803|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr11_-_82805221_82805331	0.193168	NKX6-1,2.p2	AY261801|Slfn9|237886|schlafen 9	AY261800|Slfn9|237886|schlafen 9	AK036579|Slfn9|237886|schlafen 9	NM_172796|Slfn9|237886|schlafen 9
mm9_v1_chr3_+_96474053_96474053	0.191774	NKX6-1,2.p2	NM_001081139|Ankrd35|213121|ankyrin repeat domain 35
mm9_v1_chr11_+_99769233_99769265	0.191508	NKX6-1,2.p2	AK014635|Krtap31-1|70831|keratin associated protein 31-1	NM_027568|Krtap31-1|70831|keratin associated protein 31-1	BC147672|Krtap31-1|70831|keratin associated protein 31-1	BC147678|Krtap31-1|70831|keratin associated protein 31-1
mm9_v1_chr17_-_53985142_53985282	0.189675	NKX6-1,2.p2	AK007384|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AK144336|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	BC022665|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AY005469|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	NM_026935|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2
mm9_v1_chr3_-_20142068_20142081	0.188489	NKX6-1,2.p2	BC108409|Cpa3|12873|carboxypeptidase A3, mast cell	J05118|Cpa3|12873|carboxypeptidase A3, mast cell	AK088906|Cpa3|12873|carboxypeptidase A3, mast cell	NM_007753|Cpa3|12873|carboxypeptidase A3, mast cell
mm9_v1_chr11_+_120094240_120094260	0.188386	NKX6-1,2.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr7_-_20724436_20724436	0.187678	NKX6-1,2.p2	NM_001167573|Gm10666|100043037|predicted gene 10666	NM_207547|Vmn1r93|404290|vomernasal 1 receptor Vmn1r93
mm9_v1_chr8_+_22950397_22950409	0.187489	NKX6-1,2.p2	AJ011800|Defb2|13215|defensin beta 2	NM_010030|Defb2|13215|defensin beta 2	BC109129|Defb2|13215|defensin beta 2	BC109130|Defb2|13215|defensin beta 2
mm9_v1_chr2_+_69588414_69588564	0.187227	NKX6-1,2.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr8_-_73421276_73421316	0.185146	NKX6-1,2.p2	BC024609|Rpl18a|76808|ribosomal protein L18A	AK150820|Rpl18a|76808|ribosomal protein L18A	AK152611|Rpl18a|76808|ribosomal protein L18A	AK168258|Rpl18a|76808|ribosomal protein L18A	AK010983|Rpl18a|76808|ribosomal protein L18A	AK146543|Rpl18a|76808|ribosomal protein L18A	AK161942|Rpl18a|76808|ribosomal protein L18A	AK162047|Rpl18a|76808|ribosomal protein L18A	NM_001111116|Gm15427|100041686|predicted pseudogene 15427
mm9_v1_chr9_-_15084310_15084404	0.184297	NKX6-1,2.p2	BC020185|Med17|234959|mediator complex subunit 17	NM_144933|Med17|234959|mediator complex subunit 17	AK033151|Med17|234959|mediator complex subunit 17	AK142033|Med17|234959|mediator complex subunit 17	AK038451|Med17|234959|mediator complex subunit 17	AK049112|Med17|234959|mediator complex subunit 17	AK151377|Med17|234959|mediator complex subunit 17
mm9_v1_chr1_+_9537027_9537275	0.183703	NKX6-1,2.p2	AK214958|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK013172|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr7_-_129125061_129125233	0.182989	NKX6-1,2.p2	AK191299|Cog7|233824|component of oligomeric golgi complex 7	AK030709|Cog7|233824|component of oligomeric golgi complex 7	AK145163|Cog7|233824|component of oligomeric golgi complex 7	AK154693|Cog7|233824|component of oligomeric golgi complex 7	NM_001033318|Cog7|233824|component of oligomeric golgi complex 7	AK172200|Cog7|233824|component of oligomeric golgi complex 7	AK163143|Cog7|233824|component of oligomeric golgi complex 7
mm9_v1_chr5_-_89088843_89089007	0.181498	NKX6-1,2.p2	AK208573|Grsf1|231413|G-rich RNA sequence binding factor 1	AK211991|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chrX_+_68463941_68463941	0.181362	NKX6-1,2.p2	AK016445|Mtm1|17772|X-linked myotubular myopathy gene 1	NM_001164190|Mtm1|17772|X-linked myotubular myopathy gene 1
mm9_v1_chr11_-_78510874_78510941	0.179659	NKX6-1,2.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr11_-_115138199_115138306	0.179544	NKX6-1,2.p2	BC057146|Fdxr|14149|ferredoxin reductase	AK134068|Fdxr|14149|ferredoxin reductase	BC071268|Fdxr|14149|ferredoxin reductase	D49920|Fdxr|14149|ferredoxin reductase	NM_007997|Fdxr|14149|ferredoxin reductase
mm9_v1_chr7_-_21060272_21060273	0.178307	NKX6-1,2.p2	BC107204|Gm10670|100042971|predicted gene 10670	NM_001167160|Gm10665|100043058|predicted gene 10665	NM_001167161|Gm10670|100042971|predicted gene 10670
mm9_v1_chr2_-_26092876_26092939	0.177825	NKX6-1,2.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr12_-_4745123_4745235	0.177666	NKX6-1,2.p2	BC138846|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene	BC138853|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene	AK029492|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene	NM_029107|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene	AK133272|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene	AK015158|4930417G10Rik|74855|RIKEN cDNA 4930417G10 gene
mm9_v1_chr8_-_125152673_125152702	0.177011	NKX6-1,2.p2	AK148139|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm9_v1_chr6_-_129593305_129593354	0.17689	NKX6-1,2.p2	AF195779|Klrc3|58179|killer cell lectin-like receptor subfamily C, member 3	BC130234|Klrc3|58179|killer cell lectin-like receptor subfamily C, member 3	NM_021378|Klrc3|58179|killer cell lectin-like receptor subfamily C, member 3	BC144931|Klrc3|58179|killer cell lectin-like receptor subfamily C, member 3
mm9_v1_chr5_+_34014563_34014669	0.176681	NKX6-1,2.p2	
mm9_v1_chr10_-_100051657_100051858	0.176262	NKX6-1,2.p2	AK015251|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK043358|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	BC082587|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK082894|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK032226|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr7_-_23769691_23769691	0.175788	NKX6-1,2.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr7_-_22546493_22546493	0.175788	NKX6-1,2.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr17_+_34077595_34077668	0.174681	NKX6-1,2.p2	AK145068|Wdr46|57315|WD repeat domain 46	BC013527|Wdr46|57315|WD repeat domain 46	BC046977|Wdr46|57315|WD repeat domain 46	NM_020603|Wdr46|57315|WD repeat domain 46
mm9_v1_chr3_+_102975621_102975695	0.174325	NKX6-1,2.p2	NM_026602|Bcas2|68183|breast carcinoma amplified sequence 2	BC013627|Bcas2|68183|breast carcinoma amplified sequence 2	BC037062|Bcas2|68183|breast carcinoma amplified sequence 2	AK018786|Bcas2|68183|breast carcinoma amplified sequence 2	AK005825|Bcas2|68183|breast carcinoma amplified sequence 2	AK020098|Bcas2|68183|breast carcinoma amplified sequence 2	AK153513|Bcas2|68183|breast carcinoma amplified sequence 2	AK166967|Bcas2|68183|breast carcinoma amplified sequence 2	AY043239|Bcas2|68183|breast carcinoma amplified sequence 2	BC023382|Bcas2|68183|breast carcinoma amplified sequence 2
mm9_v1_chr11_+_20125239_20125296	0.174314	NKX6-1,2.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr3_-_102586596_102586636	0.173258	NKX6-1,2.p2	M35719|Tshb|22094|thyroid stimulating hormone, beta subunit	M35720|Tshb|22094|thyroid stimulating hormone, beta subunit	M35721|Tshb|22094|thyroid stimulating hormone, beta subunit	M35723|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165939|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165940|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_009432|Tshb|22094|thyroid stimulating hormone, beta subunit
mm9_v1_chr11_+_67051128_67051361	0.171392	NKX6-1,2.p2	DQ066415|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066416|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066417|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AK138608|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AY963801|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066418|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr5_+_141717417_141717443	0.171078	NKX6-1,2.p2	AK147578|Sdk1|330222|sidekick homolog 1 (chicken)
mm9_v1_chr7_-_23249092_23249093	0.170279	NKX6-1,2.p2	BC107204|Gm10670|100042971|predicted gene 10670	NM_001167160|Gm10665|100043058|predicted gene 10665	NM_001167161|Gm10670|100042971|predicted gene 10670
mm9_v1_chr6_+_140602773_140602776	0.168808	NKX6-1,2.p2	AK050137|Aebp2|11569|AE binding protein 2
mm9_v1_chr2_-_62321694_62321709	0.168319	NKX6-1,2.p2	BC012975|Gcg|14526|glucagon	AK007911|Gcg|14526|glucagon	AK148544|Gcg|14526|glucagon	AF276754|Gcg|14526|glucagon	NM_008100|Gcg|14526|glucagon
mm9_v1_chr7_-_21883531_21883531	0.167712	NKX6-1,2.p2	NM_001166741|Vmn1r121|667240|vomeronasal 1 receptor 121
mm9_v1_chr11_-_86331141_86331142	0.167698	NKX6-1,2.p2	AK012045|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr14_-_54902599_54902599	0.167132	NKX6-1,2.p2	BC145891|Olfr49|18348|olfactory receptor 49	BC145893|Olfr49|18348|olfactory receptor 49	NM_010991|Olfr49|18348|olfactory receptor 49
mm9_v1_chr5_+_145965427_145965536	0.166819	NKX6-1,2.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr1_-_162133574_162133640	0.166587	NKX6-1,2.p2	AK164472|Cacybp|12301|calcyclin binding protein
mm9_v1_chr15_+_66502314_66502353	0.166191	NKX6-1,2.p2	U76389|Tg|21819|thyroglobulin	NM_009375|Tg|21819|thyroglobulin	BC111467|Tg|21819|thyroglobulin	AF076186|Tg|21819|thyroglobulin	AF076187|Tg|21819|thyroglobulin
mm9_v1_chr13_-_21545556_21545633	0.166091	NKX6-1,2.p2	AK156196|Zfp187|432731|zinc finger protein 187	NM_001013786|Zfp187|432731|zinc finger protein 187
mm9_v1_chr1_+_179374783_179374796	0.165337	NKX6-1,2.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr11_-_86400309_86400486	0.165122	NKX6-1,2.p2	AK154616|Tmem49|75909|transmembrane protein 49
mm9_v1_chr6_-_123368078_123368078	0.164542	NKX6-1,2.p2	NM_001104634|Vmn2r20|667180|vomeronasal 2, receptor 20
mm9_v1_chr10_+_116018336_116018351	0.16452	NKX6-1,2.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr1_-_34496128_34496223	0.161936	NKX6-1,2.p2	AK162237|Ccdc115|69668|coiled-coil domain containing 115	AK154179|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr13_+_23635920_23635920	0.161231	NKX6-1,2.p2	BC101954|Hist1h3f|260423|histone cluster 1, H3f	BC101955|Hist1h3f|260423|histone cluster 1, H3f	BC101956|Hist1h3f|260423|histone cluster 1, H3f	BC103549|Hist1h3f|260423|histone cluster 1, H3f	NM_013548|Hist1h3f|260423|histone cluster 1, H3f
mm9_v1_chr11_-_103265172_103265227	0.160853	NKX6-1,2.p2	AK154703|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr1_+_173144116_173144124	0.16059	NKX6-1,2.p2	AK149430|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr1_+_132916420_132916446	0.159765	NKX6-1,2.p2	AK152344|Il10|16153|interleukin 10	NM_010548|Il10|16153|interleukin 10	M37897|Il10|16153|interleukin 10	BC120612|Il10|16153|interleukin 10	BC137844|Il10|16153|interleukin 10
mm9_v1_chr10_-_61441817_61441832	0.158967	NKX6-1,2.p2	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr12_+_30213224_30213265	0.158745	NKX6-1,2.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr8_-_28524173_28524415	0.15862	NKX6-1,2.p2	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr10_+_20059547_20059574	0.158072	NKX6-1,2.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr1_+_70772288_70772496	0.157788	NKX6-1,2.p2	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chrX_+_104344265_104344265	0.1575	NKX6-1,2.p2	NM_001122596|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr4_+_106323673_106323718	0.156242	NKX6-1,2.p2	NM_001083887|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	NM_172272|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	AK154150|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	BC038817|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)
mm9_v1_chr8_+_3665753_3665761	0.154777	NKX6-1,2.p2	AK007679|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	AK087121|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	AK036449|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	NM_026985|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene
mm9_v1_chr7_-_22919759_22919759	0.15457	NKX6-1,2.p2	NM_001167573|Gm10666|100043037|predicted gene 10666	NM_207547|Vmn1r93|404290|vomernasal 1 receptor Vmn1r93
mm9_v1_chr18_-_46471470_46471581	0.15403	NKX6-1,2.p2	NM_001160399|Ccdc112|240261|coiled-coil domain containing 112
mm9_v1_chr11_-_103815334_103815354	0.152886	NKX6-1,2.p2	AK042341|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK049281|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK051430|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK141986|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK153905|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr18_-_73914084_73914137	0.152092	NKX6-1,2.p2	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr6_-_129976943_129976977	0.15193	NKX6-1,2.p2	BC116377|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC116822|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	BC116824|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_008464|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	U10092|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	AF288378|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_053154|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19
mm9_v1_chr9_-_119932620_119932715	0.151503	NKX6-1,2.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr8_-_120195414_120195414	0.151467	NKX6-1,2.p2	AK014586|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1	NM_028725|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1
mm9_v1_chr2_-_60589059_60589160	0.151397	NKX6-1,2.p2	AK011205|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr10_-_40602908_40602950	0.151055	NKX6-1,2.p2	AK004569|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK135411|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC061220|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK084140|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC147503|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC158078|Cdc40|71713|cell division cycle 40 homolog (yeast)	NM_027879|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr13_-_67601323_67601457	0.148418	NKX6-1,2.p2	BC139150|Zfp58|238693|zinc finger protein 58	BC139151|Zfp58|238693|zinc finger protein 58	AK041250|Zfp58|238693|zinc finger protein 58	AK162259|Zfp58|238693|zinc finger protein 58	AK167399|Zfp58|238693|zinc finger protein 58	NM_001007575|Zfp58|238693|zinc finger protein 58
mm9_v1_chr7_-_7230911_7230973	0.145413	NKX6-1,2.p2	AK046541|Vmn2r29|76229|vomeronasal 2, receptor 29	AK084962|Vmn2r29|76229|vomeronasal 2, receptor 29	BC096375|Vmn2r29|76229|vomeronasal 2, receptor 29	AK018294|Vmn2r29|76229|vomeronasal 2, receptor 29
mm9_v1_chr2_+_142904128_142904227	0.14467	NKX6-1,2.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr17_+_21625914_21625965	0.143654	NKX6-1,2.p2	BC023798|Zfp53|24132|zinc finger protein 53	BC046328|Zfp53|24132|zinc finger protein 53	AK148857|Zfp53|24132|zinc finger protein 53	NM_013843|Zfp53|24132|zinc finger protein 53	AK147827|Zfp53|24132|zinc finger protein 53	AK030965|Zfp53|24132|zinc finger protein 53
mm9_v1_chr16_+_87354429_87354497	0.143511	NKX6-1,2.p2	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chrX_+_156411885_156411895	0.143458	NKX6-1,2.p2	AK200438|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr4_-_6202747_6202782	0.141528	NKX6-1,2.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr3_+_93136665_93136689	0.140293	NKX6-1,2.p2	AK004070|Hrnr|68723|hornerin
mm9_v1_chr14_+_65885454_65885579	0.140249	NKX6-1,2.p2	AK164657|Fbxo16|50759|F-box protein 16	AK081947|Fbxo16|50759|F-box protein 16	AF176531|Fbxo16|50759|F-box protein 16	NM_015795|Fbxo16|50759|F-box protein 16	AK043554|Fbxo16|50759|F-box protein 16	BC086690|Fbxo16|50759|F-box protein 16	BC115890|Fbxo16|50759|F-box protein 16
mm9_v1_chr7_+_63305516_63305584	0.137869	NKX6-1,2.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr19_-_61216675_61216742	0.136615	NKX6-1,2.p2	BC055757|Zfp826|414758|zinc finger protein 826	AK045970|Zfp826|414758|zinc finger protein 826	AK029211|Zfp826|414758|zinc finger protein 826	AK164548|Zfp826|414758|zinc finger protein 826	BC086681|Zfp826|414758|zinc finger protein 826	AK139999|Zfp826|414758|zinc finger protein 826	AK039536|Zfp826|414758|zinc finger protein 826
mm9_v1_chr8_+_48072271_48072307	0.136045	NKX6-1,2.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr3_+_134951618_134951625	0.133194	NKX6-1,2.p2	AK007603|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr7_+_97177668_97177676	0.132788	NKX6-1,2.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr12_+_80398268_80398337	0.132493	NKX6-1,2.p2	AK032913|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)	NM_009014|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)	AK015771|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)
mm9_v1_chr11_-_100800603_100800824	0.130423	NKX6-1,2.p2	U06922|Stat3|20848|signal transducer and activator of transcription 3	AK145486|Stat3|20848|signal transducer and activator of transcription 3	U08378|Stat3|20848|signal transducer and activator of transcription 3	BC003806|Stat3|20848|signal transducer and activator of transcription 3	U30709|Stat3|20848|signal transducer and activator of transcription 3	BC019168|Stat3|20848|signal transducer and activator of transcription 3	AK153472|Stat3|20848|signal transducer and activator of transcription 3	AK153005|Stat3|20848|signal transducer and activator of transcription 3	L29278|Stat3|20848|signal transducer and activator of transcription 3	NM_011486|Stat3|20848|signal transducer and activator of transcription 3	NM_213659|Stat3|20848|signal transducer and activator of transcription 3	NM_213660|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr10_-_33501920_33501920	0.129825	NKX6-1,2.p2	NM_001101452|Gm4794|215895|predicted gene 4794
mm9_v1_chr14_+_57287083_57287181	0.127169	NKX6-1,2.p2	AB041598|Mphosph8|75339|M-phase phosphoprotein 8	NM_023773|Mphosph8|75339|M-phase phosphoprotein 8	AK018784|Mphosph8|75339|M-phase phosphoprotein 8	AK158773|Mphosph8|75339|M-phase phosphoprotein 8	AK159495|Mphosph8|75339|M-phase phosphoprotein 8	AK145432|Mphosph8|75339|M-phase phosphoprotein 8	AK145518|Mphosph8|75339|M-phase phosphoprotein 8	AK135958|Mphosph8|75339|M-phase phosphoprotein 8	BC079558|Mphosph8|75339|M-phase phosphoprotein 8	BC145164|Mphosph8|75339|M-phase phosphoprotein 8	BC145700|Mphosph8|75339|M-phase phosphoprotein 8
mm9_v1_chrY_+_2188491_2188510	0.126541	NKX6-1,2.p2	AK016258|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_001166384|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_011253|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	Y15131|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1
mm9_v1_chr4_+_45861687_45861850	0.126356	NKX6-1,2.p2	AK045033|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	NM_028788|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050152|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050348|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK004855|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene
mm9_v1_chrX_+_90900201_90900217	0.126253	NKX6-1,2.p2	AK149304|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189950|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	NM_177546|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK053577|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr2_+_13504271_13504305	0.124972	NKX6-1,2.p2	
mm9_v1_chr11_+_101303558_101303776	0.124959	NKX6-1,2.p2	NM_011289|Rpl27|19942|ribosomal protein L27	AF214527|Rpl27|19942|ribosomal protein L27	AK132027|Rpl27|19942|ribosomal protein L27	AK146291|Rpl27|19942|ribosomal protein L27	AK008120|Rpl27|19942|ribosomal protein L27	AK012566|Rpl27|19942|ribosomal protein L27	AK010627|Rpl27|19942|ribosomal protein L27	AK002945|Rpl27|19942|ribosomal protein L27	BC024366|Rpl27|19942|ribosomal protein L27	BC082284|Rpl27|19942|ribosomal protein L27	AK088211|Rpl27|19942|ribosomal protein L27	BC090395|Rpl27|19942|ribosomal protein L27
mm9_v1_chr11_-_79056525_79056525	0.124688	NKX6-1,2.p2	AK048511|Wsb1|78889|WD repeat and SOCS box-containing 1	NM_001042565|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chrX_-_165625110_165625142	0.124441	NKX6-1,2.p2	BC059090|Amelx|11704|amelogenin X chromosome	D31768|Amelx|11704|amelogenin X chromosome	D31769|Amelx|11704|amelogenin X chromosome	AK029358|Amelx|11704|amelogenin X chromosome	NM_001081978|Amelx|11704|amelogenin X chromosome	NM_009666|Amelx|11704|amelogenin X chromosome	S74899|Amelx|11704|amelogenin X chromosome
mm9_v1_chr4_-_107890526_107890526	0.124426	NKX6-1,2.p2	NM_001167936|Zyg11a|230590|zyg-11 homolog A (C. elegans)
mm9_v1_chrX_+_166123130_166123181	0.123165	NKX6-1,2.p2	AK160120|Mid1|17318|midline 1	NM_010797|Mid1|17318|midline 1	Y14848|Mid1|17318|midline 1
mm9_v1_chr4_-_73596693_73596749	0.122888	NKX6-1,2.p2	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chr3_-_88214215_88214225	0.122737	NKX6-1,2.p2	BC034333|Pmf1|67037|polyamine-modulated factor 1
mm9_v1_chr16_+_16892913_16892944	0.122721	NKX6-1,2.p2	
mm9_v1_chr9_+_20016650_20016744	0.121833	NKX6-1,2.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr19_+_46227039_46227050	0.120682	NKX6-1,2.p2	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr2_+_70312979_70313222	0.12041	NKX6-1,2.p2	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr19_+_34035676_34035740	0.120272	NKX6-1,2.p2	AK009923|Lipf|67717|lipase, gastric	AK009428|Lipf|67717|lipase, gastric	AK009431|Lipf|67717|lipase, gastric	AK009546|Lipf|67717|lipase, gastric	AK075913|Lipf|67717|lipase, gastric	AK009300|Lipf|67717|lipase, gastric	AK009359|Lipf|67717|lipase, gastric	AK009413|Lipf|67717|lipase, gastric	AK009437|Lipf|67717|lipase, gastric	AK009459|Lipf|67717|lipase, gastric	AK009473|Lipf|67717|lipase, gastric	AK009474|Lipf|67717|lipase, gastric	AK009523|Lipf|67717|lipase, gastric	AK009525|Lipf|67717|lipase, gastric	AK009537|Lipf|67717|lipase, gastric	AK009560|Lipf|67717|lipase, gastric	AK009571|Lipf|67717|lipase, gastric	AK009573|Lipf|67717|lipase, gastric	AK009729|Lipf|67717|lipase, gastric	AK009773|Lipf|67717|lipase, gastric	AK009875|Lipf|67717|lipase, gastric	AK009990|Lipf|67717|lipase, gastric	AK010019|Lipf|67717|lipase, gastric	AK010026|Lipf|67717|lipase, gastric	AK010035|Lipf|67717|lipase, gastric	AK010036|Lipf|67717|lipase, gastric	AK010058|Lipf|67717|lipase, gastric	AK010061|Lipf|67717|lipase, gastric	AK010091|Lipf|67717|lipase, gastric	AK010093|Lipf|67717|lipase, gastric	AK010103|Lipf|67717|lipase, gastric	AK010106|Lipf|67717|lipase, gastric	AK010110|Lipf|67717|lipase, gastric	AK010116|Lipf|67717|lipase, gastric	AK010123|Lipf|67717|lipase, gastric	AK010125|Lipf|67717|lipase, gastric	AK010139|Lipf|67717|lipase, gastric	AK010148|Lipf|67717|lipase, gastric	AK010173|Lipf|67717|lipase, gastric	AK010203|Lipf|67717|lipase, gastric	AK010231|Lipf|67717|lipase, gastric	AK010236|Lipf|67717|lipase, gastric	BC061067|Lipf|67717|lipase, gastric	NM_026334|Lipf|67717|lipase, gastric	AK009479|Lipf|67717|lipase, gastric	AK009544|Lipf|67717|lipase, gastric
mm9_v1_chr17_+_72119030_72119041	0.119063	NKX6-1,2.p2	AK029962|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	NM_175378|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK018895|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK075758|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK161301|Clip4|78785|CAP-GLY domain containing linker protein family, member 4
mm9_v1_chr11_+_102254816_102254873	0.119047	NKX6-1,2.p2	BC046319|Rundc3a|51799|RUN domain containing 3A
mm9_v1_chr1_+_173144142_173144169	0.116744	NKX6-1,2.p2	AK149381|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	BC089541|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	AF009327|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr19_-_33664731_33664800	0.114807	NKX6-1,2.p2	AK170332|Lipo1|381236|lipase, member O1	AK139790|Lipo1|381236|lipase, member O1	NM_001013770|Lipo1|381236|lipase, member O1
mm9_v1_chr4_+_88465822_88465822	0.114727	NKX6-1,2.p2	BC116870|Ifna11|15964|interferon alpha 11	BC116872|Ifna11|15964|interferon alpha 11	NM_008333|Ifna11|15964|interferon alpha 11
mm9_v1_chr3_-_68930721_68930780	0.113958	NKX6-1,2.p2	AF020771|Kpna4|16649|karyopherin (importin) alpha 4	CT010281|Kpna4|16649|karyopherin (importin) alpha 4
mm9_v1_chr8_-_124468764_124468811	0.111376	NKX6-1,2.p2	BC030174|Car5a|12352|carbonic anhydrase 5a, mitochondrial	X51971|Car5a|12352|carbonic anhydrase 5a, mitochondrial	NM_007608|Car5a|12352|carbonic anhydrase 5a, mitochondrial
mm9_v1_chr5_-_76792766_76792812	0.110739	NKX6-1,2.p2	BC125545|Nmu|56183|neuromedin U	BC138071|Nmu|56183|neuromedin U	BC145135|Nmu|56183|neuromedin U	AF203444|Nmu|56183|neuromedin U	NM_019515|Nmu|56183|neuromedin U	AK077478|Nmu|56183|neuromedin U
mm9_v1_chr2_-_175261262_175261335	0.109998	NKX6-1,2.p2	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001099349|Gm14308|100043381|predicted gene 14308	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK039408|Gm4724|100043915|predicted gene 4724
mm9_v1_chr1_+_53353995_53354002	0.109524	NKX6-1,2.p2	BC023903|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)
mm9_v1_chr2_+_175737015_175737088	0.108739	NKX6-1,2.p2	AK039408|Gm4724|100043915|predicted gene 4724	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr8_+_23057233_23057262	0.108346	NKX6-1,2.p2	AJ437649|Defb13|246083|defensin beta 13	NM_139223|Defb13|246083|defensin beta 13	AJ575427|Defb13|246083|defensin beta 13
mm9_v1_chr12_+_29334537_29334550	0.108237	NKX6-1,2.p2	BC019411|Rnaseh1|19819|ribonuclease H1
mm9_v1_chrY_+_2156898_2156920	0.108204	NKX6-1,2.p2	AK016258|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_001166384|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_011253|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	BC150670|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	Y15131|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	U36929|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1
mm9_v1_chr7_-_113102453_113102483	0.10675	NKX6-1,2.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113358823_113358853	0.10675	NKX6-1,2.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr11_-_106642357_106642481	0.105862	NKX6-1,2.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr1_-_162281701_162281701	0.105621	NKX6-1,2.p2	AK147634|Rabgap1l|29809|RAB GTPase activating protein 1-like	NM_001038621|Rabgap1l|29809|RAB GTPase activating protein 1-like
mm9_v1_chr8_+_108417466_108417479	0.105295	NKX6-1,2.p2	BC100315|Nrn1l|234700|neuritin 1-like	AK080711|Nrn1l|234700|neuritin 1-like	AK090312|Nrn1l|234700|neuritin 1-like	NM_175024|Nrn1l|234700|neuritin 1-like	DQ176852|Nrn1l|234700|neuritin 1-like
mm9_v1_chr6_-_130256444_130256498	0.10497	NKX6-1,2.p2	AF204265|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204266|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204267|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204268|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	BC099861|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF074460|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF283250|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283251|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283252|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF307947|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF307948|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	NM_010646|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12
mm9_v1_chr2_+_175639464_175639537	0.103468	NKX6-1,2.p2	AK039408|Gm4724|100043915|predicted gene 4724	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr11_-_113511366_113511407	0.102	NKX6-1,2.p2	AK165545|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11
mm9_v1_chr15_+_97622785_97622875	0.101446	NKX6-1,2.p2	AK195068|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK196553|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK214093|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK216369|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1
mm9_v1_chr4_-_134323845_134323948	0.100241	NKX6-1,2.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr8_+_108424267_108424373	0.0995131	NKX6-1,2.p2	AK153861|Pskh1|244631|protein serine kinase H1	AK053397|Pskh1|244631|protein serine kinase H1	AK154570|Pskh1|244631|protein serine kinase H1	AK166338|Pskh1|244631|protein serine kinase H1	BC050128|Pskh1|244631|protein serine kinase H1	NM_173432|Pskh1|244631|protein serine kinase H1
mm9_v1_chr5_-_37087142_37087184	0.0982689	NKX6-1,2.p2	AK152987|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	AK032804|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	AK139370|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr13_+_97408920_97408964	0.097644	NKX6-1,2.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr12_+_103707401_103707414	0.0956762	NKX6-1,2.p2	BC016883|Golga5|27277|golgi autoantigen, golgin subfamily a, 5
mm9_v1_chr6_+_5340417_5340708	0.0956214	NKX6-1,2.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr2_+_176266744_176266783	0.0944588	NKX6-1,2.p2	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr9_-_45636638_45636736	0.0935926	NKX6-1,2.p2	AK158671|Cep164|214552|centrosomal protein 164	NM_001081373|Cep164|214552|centrosomal protein 164
mm9_v1_chr5_-_123237776_123238028	0.093081	NKX6-1,2.p2	
mm9_v1_chr13_+_21454688_21454753	0.0911727	NKX6-1,2.p2	AK129138|Zscan12|22758|zinc finger and SCAN domain containing 12	NM_016684|Zscan12|22758|zinc finger and SCAN domain containing 12	AK075886|Zscan12|22758|zinc finger and SCAN domain containing 12	AK139837|Zscan12|22758|zinc finger and SCAN domain containing 12	AK142005|Zscan12|22758|zinc finger and SCAN domain containing 12	BC027041|Zscan12|22758|zinc finger and SCAN domain containing 12
mm9_v1_chr11_-_51799215_51799347	0.0907532	NKX6-1,2.p2	AK190260|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr9_+_21400165_21400200	0.0904751	NKX6-1,2.p2	
mm9_v1_chrX_+_100688896_100688955	0.0903574	NKX6-1,2.p2	AK148110|Enox|70252|expressed neighbor of Xist	AK137473|Enox|70252|expressed neighbor of Xist	AK007997|Enox|70252|expressed neighbor of Xist
mm9_v1_chr11_+_99797604_99797636	0.0896908	NKX6-1,2.p2	AK037252|Krtap31-2|432602|keratin associated protein 31-2	NM_001025244|Krtap31-2|432602|keratin associated protein 31-2	BC147120|Krtap31-2|432602|keratin associated protein 31-2	BC147121|Krtap31-2|432602|keratin associated protein 31-2
mm9_v1_chr2_-_3339919_3339919	0.0892424	NKX6-1,2.p2	BC049538|Meig1|104362|meiosis expressed gene 1	NM_008579|Meig1|104362|meiosis expressed gene 1
mm9_v1_chr2_-_176421012_176421051	0.0884052	NKX6-1,2.p2	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001099349|Gm14308|100043381|predicted gene 14308	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr3_+_90097269_90097314	0.0871816	NKX6-1,2.p2	AK041594|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr6_-_136123521_136123528	0.0871488	NKX6-1,2.p2	AJ459261|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AJ459262|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AJ459263|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AK002963|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	NM_008171|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr7_+_74792295_74792398	0.0865547	NKX6-1,2.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr4_+_126698539_126698547	0.085724	NKX6-1,2.p2	NM_023603|Sfpq|71514|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm9_v1_chr9_-_22112081_22112120	0.0849231	NKX6-1,2.p2	BC005471|Zfp810|235050|zinc finger protein 810	NM_145612|Zfp810|235050|zinc finger protein 810	AK032556|Zfp810|235050|zinc finger protein 810
mm9_v1_chr6_-_56654667_56654692	0.0841507	NKX6-1,2.p2	BC048459|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK008480|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK011218|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC061085|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK009617|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132626|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132628|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_025520|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr11_-_94515067_94515072	0.0822124	NKX6-1,2.p2	AK078516|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)	NM_177752|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm9_v1_chr7_+_25055436_25055599	0.0818131	NKX6-1,2.p2	AK132229|Zfp93|22755|zinc finger protein 93	NM_009567|Zfp93|22755|zinc finger protein 93	U46186|Zfp93|22755|zinc finger protein 93	AK146095|Zfp93|22755|zinc finger protein 93	AK165630|Zfp93|22755|zinc finger protein 93	AK040325|Zfp93|22755|zinc finger protein 93	AK028905|Zfp93|22755|zinc finger protein 93
mm9_v1_chr11_+_96179580_96179580	0.0816815	NKX6-1,2.p2	BC095947|Hoxb4|15412|homeobox B4	NM_010459|Hoxb4|15412|homeobox B4
mm9_v1_chr5_-_147395979_147395979	0.081451	NKX6-1,2.p2	BC055746|Gpr12|14738|G-protein coupled receptor 12	NM_008151|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr11_-_94515034_94515062	0.0813367	NKX6-1,2.p2	BC089459|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm9_v1_chr2_-_175163697_175163736	0.0806791	NKX6-1,2.p2	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001099349|Gm14308|100043381|predicted gene 14308	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr4_-_49421014_49421022	0.0805054	NKX6-1,2.p2	AK050357|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	AK050308|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	NM_145368|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2
mm9_v1_chr11_+_46564012_46564012	0.0803715	NKX6-1,2.p2	AK133466|Havcr1|171283|hepatitis A virus cellular receptor 1	NM_001166631|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr2_+_65683823_65683911	0.0793199	NKX6-1,2.p2	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr1_+_63223689_63223722	0.0787138	NKX6-1,2.p2	BC039635|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK027911|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK168191|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC023139|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK012756|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC003899|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr2_+_152891690_152891738	0.0779477	NKX6-1,2.p2	BC020535|BC020535|228788|cDNA sequence BC020535	NM_145536|BC020535|228788|cDNA sequence BC020535
mm9_v1_chr16_-_62846777_62846879	0.0773276	NKX6-1,2.p2	AK016794|Arl13b|68146|ADP-ribosylation factor-like 13B	AK020859|Arl13b|68146|ADP-ribosylation factor-like 13B	AK051159|Arl13b|68146|ADP-ribosylation factor-like 13B	AK021270|Arl13b|68146|ADP-ribosylation factor-like 13B	NM_026577|Arl13b|68146|ADP-ribosylation factor-like 13B
mm9_v1_chr9_+_113721698_113721717	0.0765075	NKX6-1,2.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr18_-_74367362_74367371	0.0762068	NKX6-1,2.p2	AK172500|Ska1|66468|spindle and kinetochore associated complex subunit 1
mm9_v1_chr10_+_40199817_40199881	0.0761718	NKX6-1,2.p2	AK030146|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr1_-_127289729_127289773	0.0758094	NKX6-1,2.p2	
mm9_v1_chr5_-_115086269_115086364	0.0756671	NKX6-1,2.p2	AK158652|Trpv4|63873|transient receptor potential cation channel, subfamily V, member 4
mm9_v1_chr2_-_172195998_172196037	0.0754354	NKX6-1,2.p2	U69106|Aurka|20878|aurora kinase A	BC014711|Aurka|20878|aurora kinase A	NM_011497|Aurka|20878|aurora kinase A	BC005425|Aurka|20878|aurora kinase A	U80932|Aurka|20878|aurora kinase A	AK085861|Aurka|20878|aurora kinase A	AK169363|Aurka|20878|aurora kinase A	AK077513|Aurka|20878|aurora kinase A	AK145968|Aurka|20878|aurora kinase A
mm9_v1_chr9_+_119354040_119354104	0.0751289	NKX6-1,2.p2	NM_001172136|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	NM_172456|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK148426|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK028887|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK051300|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK162566|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK163555|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC119024|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC144729|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK034654|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC094589|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC052171|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC059920|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC064730|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like
mm9_v1_chr16_+_49699314_49699432	0.075118	NKX6-1,2.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr1_+_93194900_93195016	0.0737447	NKX6-1,2.p2	AK036750|Scly|50880|selenocysteine lyase	NM_016717|Scly|50880|selenocysteine lyase	BC021389|Scly|50880|selenocysteine lyase	AK036533|Scly|50880|selenocysteine lyase	BC019879|Scly|50880|selenocysteine lyase	AF175407|Scly|50880|selenocysteine lyase	AK020864|Scly|50880|selenocysteine lyase	AK178608|Scly|50880|selenocysteine lyase	AK179665|Scly|50880|selenocysteine lyase	AK183254|Scly|50880|selenocysteine lyase	AK188684|Scly|50880|selenocysteine lyase
mm9_v1_chr11_+_68859125_68859285	0.0735498	NKX6-1,2.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr11_+_6446883_6447007	0.07156	NKX6-1,2.p2	NM_001190343|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)	NM_146014|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)	AK155145|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)	BC029157|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)	AY442689|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)
mm9_v1_chr5_+_31916313_31916404	0.0711983	NKX6-1,2.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr11_+_97565100_97565174	0.071147	NKX6-1,2.p2	BC098233|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3
mm9_v1_chr7_+_30969184_30969226	0.0704533	NKX6-1,2.p2	AK079950|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	NM_009944|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	BC060974|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	AF037370|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1
mm9_v1_chr2_+_164648185_164648185	0.0703658	NKX6-1,2.p2	BC046831|Zswim1|71971|zinc finger, SWIM domain containing 1	NM_028028|Zswim1|71971|zinc finger, SWIM domain containing 1
mm9_v1_chrX_-_146875621_146875705	0.0699782	NKX6-1,2.p2	BC058428|Tmem29|382245|transmembrane protein 29	AK018228|Tmem29|382245|transmembrane protein 29	NM_001164684|Tmem29|382245|transmembrane protein 29	AK165152|Tmem29|382245|transmembrane protein 29
mm9_v1_chr9_+_123371135_123371218	0.0699709	NKX6-1,2.p2	AY248755|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chrX_-_147531030_147531085	0.0691499	NKX6-1,2.p2	BC037444|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC025008|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	AK044504|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC049668|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_001164578|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_175146|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
mm9_v1_chr3_-_19164956_19164968	0.0685768	NKX6-1,2.p2	U68171|Pde7a|18583|phosphodiesterase 7A	AK168957|Pde7a|18583|phosphodiesterase 7A	NM_008802|Pde7a|18583|phosphodiesterase 7A
mm9_v1_chr15_+_103070840_103070935	0.068073	NKX6-1,2.p2	AK131999|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK136113|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146630|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_001039129|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_010447|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168531|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK135391|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK152684|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK161730|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166901|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167161|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167810|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167811|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168420|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168733|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK169216|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK007802|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK088308|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146126|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166989|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167820|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167913|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	M99167|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC052723|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC080675|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC092395|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC089340|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC083136|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86728|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86729|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1
mm9_v1_chr11_+_6460185_6460185	0.0678908	NKX6-1,2.p2	AK169727|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)	NM_001190344|Ccm2|216527|cerebral cavernous malformation 2 homolog (human)
mm9_v1_chr11_+_17157549_17157664	0.0666413	NKX6-1,2.p2	X95591|C1d|57316|C1D nuclear receptor co-repressor	AK028702|C1d|57316|C1D nuclear receptor co-repressor	AK035169|C1d|57316|C1D nuclear receptor co-repressor	NM_020558|C1d|57316|C1D nuclear receptor co-repressor	BC005436|C1d|57316|C1D nuclear receptor co-repressor
mm9_v1_chr12_+_81891598_81891755	0.0666087	NKX6-1,2.p2	AK129100|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr8_+_46970814_46970842	0.0656584	NKX6-1,2.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr2_+_172196161_172196250	0.0624603	NKX6-1,2.p2	AK145001|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm9_v1_chr1_-_12980994_12981257	0.0624388	NKX6-1,2.p2	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr19_-_8040489_8040530	0.0616965	NKX6-1,2.p2	AB056443|AB056442|171405|cDNA sequence AB056442	AB056442|AB056442|171405|cDNA sequence AB056442	NM_134256|AB056442|171405|cDNA sequence AB056442
mm9_v1_chr11_-_29447745_29447783	0.060185	NKX6-1,2.p2	BC081446|Rps27a|78294|ribosomal protein S27A	BC096392|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr1_+_173367685_173367771	0.0588429	NKX6-1,2.p2	AK033574|F11r|16456|F11 receptor	NM_172647|F11r|16456|F11 receptor	BC021876|F11r|16456|F11 receptor	CT010347|F11r|16456|F11 receptor
mm9_v1_chr17_-_49703661_49703689	0.0580509	NKX6-1,2.p2	BC050043|Daam2|76441|dishevelled associated activator of morphogenesis 2	NM_001008231|Daam2|76441|dishevelled associated activator of morphogenesis 2	AY426536|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chr11_-_29447830_29448039	0.0578492	NKX6-1,2.p2	BC002108|Rps27a|78294|ribosomal protein S27A	AK018706|Rps27a|78294|ribosomal protein S27A	NM_001033865|Rps27a|78294|ribosomal protein S27A	NM_024277|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr8_+_114535258_114535298	0.0558195	NKX6-1,2.p2	NM_020584|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK161452|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	BC017641|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148537|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148508|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein
mm9_v1_chr8_-_108515606_108515687	0.0556457	NKX6-1,2.p2	AK170094|Dpep2|319446|dipeptidase 2	AK155099|Dpep2|319446|dipeptidase 2	AK155308|Dpep2|319446|dipeptidase 2	AK170970|Dpep2|319446|dipeptidase 2	AK171044|Dpep2|319446|dipeptidase 2	AK171122|Dpep2|319446|dipeptidase 2	AK171196|Dpep2|319446|dipeptidase 2	AK171268|Dpep2|319446|dipeptidase 2	AK171503|Dpep2|319446|dipeptidase 2	AK155417|Dpep2|319446|dipeptidase 2	AK171606|Dpep2|319446|dipeptidase 2	AK171155|Dpep2|319446|dipeptidase 2	AK089165|Dpep2|319446|dipeptidase 2	AK089244|Dpep2|319446|dipeptidase 2
mm9_v1_chr1_-_129998984_129999039	0.0520323	NKX6-1,2.p2	BC066035|Zranb3|226409|zinc finger, RAN-binding domain containing 3	NM_027678|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK042139|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK083641|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK084943|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK085488|Zranb3|226409|zinc finger, RAN-binding domain containing 3
mm9_v1_chr4_+_8533630_8533662	0.0519331	NKX6-1,2.p2	AK213817|Rab2a|59021|RAB2A, member RAS oncogene family	AK218701|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr1_-_132586370_132586494	0.050979	NKX6-1,2.p2	BC065379|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr2_-_104689616_104690006	0.0503717	NKX6-1,2.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chrX_+_35688564_35688695	0.0502324	NKX6-1,2.p2	AK004245|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr3_+_63780020_63780051	0.049892	NKX6-1,2.p2	AK146654|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr9_-_103104394_103104479	0.0456969	NKX6-1,2.p2	AK030437|Srprb|20818|signal recognition particle receptor, B subunit	NM_009275|Srprb|20818|signal recognition particle receptor, B subunit	AK075583|Srprb|20818|signal recognition particle receptor, B subunit	AK007859|Srprb|20818|signal recognition particle receptor, B subunit	AK167039|Srprb|20818|signal recognition particle receptor, B subunit	U17343|Srprb|20818|signal recognition particle receptor, B subunit	BC003798|Srprb|20818|signal recognition particle receptor, B subunit	AK004854|Srprb|20818|signal recognition particle receptor, B subunit	AK008383|Srprb|20818|signal recognition particle receptor, B subunit	AK015469|Srprb|20818|signal recognition particle receptor, B subunit	AK160600|Srprb|20818|signal recognition particle receptor, B subunit
mm9_v1_chr15_+_101904294_101904371	0.0451594	NKX6-1,2.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr7_+_139802303_139802366	0.0447942	NKX6-1,2.p2	NM_029609|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase	AK009207|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase	BC065789|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase
mm9_v1_chr6_-_113451922_113451926	0.0447312	NKX6-1,2.p2	AK031947|Prrt3|210673|proline-rich transmembrane protein 3
mm9_v1_chr2_+_87366184_87366358	0.0410945	NKX6-1,2.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr4_-_122817165_122817212	0.0407617	NKX6-1,2.p2	AF182825|Ppie|56031|peptidylprolyl isomerase E (cyclophilin E)	BC045154|Ppie|56031|peptidylprolyl isomerase E (cyclophilin E)	AK008177|Ppie|56031|peptidylprolyl isomerase E (cyclophilin E)	NM_019489|Ppie|56031|peptidylprolyl isomerase E (cyclophilin E)	AK042165|Ppie|56031|peptidylprolyl isomerase E (cyclophilin E)
mm9_v1_chr2_+_150735306_150735352	0.0395145	NKX6-1,2.p2	NM_001163476|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	NM_027014|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	AK013116|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	BC027537|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)
mm9_v1_chr16_+_17980657_17980657	0.0387759	NKX6-1,2.p2	NM_016983|Vpreb2|22363|pre-B lymphocyte gene 2
mm9_v1_chr8_+_15011024_15011024	0.0386633	NKX6-1,2.p2	AK013531|Kbtbd11|74901|kelch repeat and BTB (POZ) domain containing 11	NM_029116|Kbtbd11|74901|kelch repeat and BTB (POZ) domain containing 11
mm9_v1_chr9_-_51137021_51137021	0.0385653	NKX6-1,2.p2	AK007796|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene	NM_027217|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene
mm9_v1_chr15_+_44455984_44456003	0.0380913	NKX6-1,2.p2	AK004366|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AF076524|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9
mm9_v1_chr11_-_94834751_94834776	0.0352059	NKX6-1,2.p2	AF019564|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	BC060287|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK009015|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK075915|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	NM_001136080|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)
mm9_v1_chr8_+_107828491_107828506	0.0339677	NKX6-1,2.p2	AK212171|E2f4|104394|E2F transcription factor 4
mm9_v1_chr4_+_15211137_15211173	0.0330256	NKX6-1,2.p2	AK162736|Tmem64|100201|transmembrane protein 64
mm9_v1_chrX_-_102265380_102265463	0.0326904	NKX6-1,2.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr19_+_41624128_41624128	0.0322876	NKX6-1,2.p2	AK041090|Lcor|212391|ligand dependent nuclear receptor corepressor	NM_172154|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr18_+_37678006_37678134	0.0321981	NKX6-1,2.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr4_-_96220294_96220351	0.0316099	NKX6-1,2.p2	AK045421|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	BC050832|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK033614|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	NM_010008|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK084025|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr4_-_147808800_147808920	0.0314671	NKX6-1,2.p2	
mm9_v1_chr10_+_80291835_80291840	0.0313873	NKX6-1,2.p2	
mm9_v1_chr12_-_85262786_85262867	0.0309624	NKX6-1,2.p2	AK004553|Numb|18222|numb gene homolog (Drosophila)	BC050108|Numb|18222|numb gene homolog (Drosophila)	BC033459|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr10_+_19341803_19341845	0.0299741	NKX6-1,2.p2	AK139024|Il22ra2|237310|interleukin 22 receptor, alpha 2	AK040641|Il22ra2|237310|interleukin 22 receptor, alpha 2	AK138913|Il22ra2|237310|interleukin 22 receptor, alpha 2	NM_178258|Il22ra2|237310|interleukin 22 receptor, alpha 2	AJ555484|Il22ra2|237310|interleukin 22 receptor, alpha 2	BC126872|Il22ra2|237310|interleukin 22 receptor, alpha 2	BC124998|Il22ra2|237310|interleukin 22 receptor, alpha 2	AF493604|Il22ra2|237310|interleukin 22 receptor, alpha 2
mm9_v1_chr7_-_11242322_11242322	0.0292243	NKX6-1,2.p2	NM_001110020|Gm6900|628596|predicted gene 6900
mm9_v1_chr1_+_72354084_72354123	0.0289959	NKX6-1,2.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr18_+_42671130_42671146	0.0287668	NKX6-1,2.p2	NM_001039474|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr15_+_78744576_78744597	0.0271804	NKX6-1,2.p2	BC069982|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase
mm9_v1_chr6_+_77192839_77192971	0.0271256	NKX6-1,2.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr7_+_53172153_53172156	0.02593	NKX6-1,2.p2	
mm9_v1_chr9_+_54758322_54758381	0.0258411	NKX6-1,2.p2	AK038058|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr5_+_151062363_151062504	0.0257392	NKX6-1,2.p2	NM_172887|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr11_+_23156482_23156531	0.0251994	NKX6-1,2.p2	BC034710|Xpo1|103573|exportin 1, CRM1 homolog (yeast)
mm9_v1_chr6_+_86145477_86145494	0.0248293	NKX6-1,2.p2	AK162680|Tgfa|21802|transforming growth factor alpha	M92420|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr17_-_34077264_34077287	0.0221946	NKX6-1,2.p2	AK076015|H2-Ke2|14976|H2-K region expressed gene 2	AK167900|H2-Ke2|14976|H2-K region expressed gene 2	NM_001185182|H2-Ke2|14976|H2-K region expressed gene 2	AK010679|H2-Ke2|14976|H2-K region expressed gene 2	NM_010385|H2-Ke2|14976|H2-K region expressed gene 2
mm9_v1_chr16_-_17531176_17531234	0.0219157	NKX6-1,2.p2	AK154641|Thap7|69009|THAP domain containing 7
mm9_v1_chr5_-_110537215_110537219	0.0217812	NKX6-1,2.p2	AK144812|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152225|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152972|Gtpbp6|107999|GTP binding protein 6 (putative)	NM_145147|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr19_-_12840121_12840121	0.0209643	NKX6-1,2.p2	BC027539|Cntf|12803|ciliary neurotrophic factor	NM_170786|Cntf|12803|ciliary neurotrophic factor
mm9_v1_chr8_+_46970860_46970893	0.0201179	NKX6-1,2.p2	AK016447|Pdlim3|53318|PDZ and LIM domain 3	BC070418|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr2_+_62502329_62502489	0.0195295	NKX6-1,2.p2	AK046347|Gca|227960|grancalcin	AK050540|Gca|227960|grancalcin	AK033740|Gca|227960|grancalcin	AK040549|Gca|227960|grancalcin	AK049317|Gca|227960|grancalcin	AK078915|Gca|227960|grancalcin	NM_145523|Gca|227960|grancalcin	AF518325|Gca|227960|grancalcin	BC021450|Gca|227960|grancalcin	AB088388|Gca|227960|grancalcin
mm9_v1_chr3_+_53267587_53267689	0.0191466	NKX6-1,2.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr11_-_77893846_77893871	0.0188919	NKX6-1,2.p2	AF190730|Eral1|57837|Era (G-protein)-like 1 (E. coli)	AF190731|Eral1|57837|Era (G-protein)-like 1 (E. coli)	BC037603|Eral1|57837|Era (G-protein)-like 1 (E. coli)	AB049389|Eral1|57837|Era (G-protein)-like 1 (E. coli)	BC068271|Eral1|57837|Era (G-protein)-like 1 (E. coli)	AK018664|Eral1|57837|Era (G-protein)-like 1 (E. coli)
mm9_v1_chr17_+_71533317_71533374	0.0161756	NKX6-1,2.p2	AF286723|Lpin2|64898|lipin 2	NM_022882|Lpin2|64898|lipin 2
mm9_v1_chr16_+_16870904_16870931	0.0135629	NKX6-1,2.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr8_+_13869640_13869740	0.0119554	NKX6-1,2.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr14_+_4126976_4126976	0.0108437	NKX6-1,2.p2	BC093494|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790	NM_001029930|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790
mm9_v1_chr1_-_186669744_186669758	0.0108035	NKX6-1,2.p2	AK013440|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2
mm9_v1_chr1_-_187941133_187941207	0.0105495	NKX6-1,2.p2	AK148533|Lyplal1|226791|lysophospholipase-like 1	BC027340|Lyplal1|226791|lysophospholipase-like 1	NM_146106|Lyplal1|226791|lysophospholipase-like 1
mm9_v1_chr13_+_55694491_55694540	0.00993747	NKX6-1,2.p2	NM_026211|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK012474|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152496|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152581|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK153383|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK010259|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK169001|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC049282|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC058801|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC004691|Tmed9|67511|transmembrane emp24 protein transport domain containing 9
mm9_v1_chr11_+_97564712_97564785	0.00947824	NKX6-1,2.p2	AK153162|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	AK002331|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	NM_011971|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	AK050108|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	AK080755|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	AK010488|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	BC014783|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3	AF060092|Psmb3|26446|proteasome (prosome, macropain) subunit, beta type 3
mm9_v1_chr2_-_177691943_177692036	0.00919555	NKX6-1,2.p2	BC042711|Gm14326|665211|predicted gene 14326	BC079554|Gm14326|665211|predicted gene 14326	NM_001190302|Gm14326|665211|predicted gene 14326
mm9_v1_chr9_+_123936700_123936876	0.00820246	NKX6-1,2.p2	AK041106|Ccr3|12771|chemokine (C-C motif) receptor 3	AK089875|Ccr3|12771|chemokine (C-C motif) receptor 3	NM_009914|Ccr3|12771|chemokine (C-C motif) receptor 3	AK153518|Ccr3|12771|chemokine (C-C motif) receptor 3	AK089895|Ccr3|12771|chemokine (C-C motif) receptor 3	BC108967|Ccr3|12771|chemokine (C-C motif) receptor 3	BC108968|Ccr3|12771|chemokine (C-C motif) receptor 3
mm9_v1_chr1_-_99666564_99666675	0.00812386	NKX6-1,2.p2	AK087712|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK149804|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK129140|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK166095|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	NM_173760|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2
mm9_v1_chr2_+_69627711_69627793	0.00762008	NKX6-1,2.p2	BC025612|Phospho2|73373|phosphatase, orphan 2	AK159551|Phospho2|73373|phosphatase, orphan 2	AK010147|Phospho2|73373|phosphatase, orphan 2	AK006724|Phospho2|73373|phosphatase, orphan 2	NM_028521|Phospho2|73373|phosphatase, orphan 2
mm9_v1_chr17_+_8138441_8138546	0.00721972	NKX6-1,2.p2	NM_025789|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK148230|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC057649|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC022760|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC110424|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr5_-_87683812_87683841	0.00677815	NKX6-1,2.p2	BC019487|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37	NM_053215|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37	AK002736|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37
mm9_v1_chr11_-_102046532_102046628	0.00579835	NKX6-1,2.p2	AK081685|Lsm12|268490|LSM12 homolog (S. cerevisiae)	AK011126|Lsm12|268490|LSM12 homolog (S. cerevisiae)	BC027784|Lsm12|268490|LSM12 homolog (S. cerevisiae)	AK132889|Lsm12|268490|LSM12 homolog (S. cerevisiae)	AK075668|Lsm12|268490|LSM12 homolog (S. cerevisiae)	AK151118|Lsm12|268490|LSM12 homolog (S. cerevisiae)	NM_172947|Lsm12|268490|LSM12 homolog (S. cerevisiae)
mm9_v1_chr1_+_87804881_87804999	0.00554397	NKX6-1,2.p2	AK195066|Itm2c|64294|integral membrane protein 2C	AK181068|Itm2c|64294|integral membrane protein 2C	AK184077|Itm2c|64294|integral membrane protein 2C	AK184543|Itm2c|64294|integral membrane protein 2C	AK184789|Itm2c|64294|integral membrane protein 2C	AK185815|Itm2c|64294|integral membrane protein 2C	AK187837|Itm2c|64294|integral membrane protein 2C	AK202316|Itm2c|64294|integral membrane protein 2C	AK208625|Itm2c|64294|integral membrane protein 2C	AK210908|Itm2c|64294|integral membrane protein 2C	AK214441|Itm2c|64294|integral membrane protein 2C	AK214627|Itm2c|64294|integral membrane protein 2C	AK188840|Itm2c|64294|integral membrane protein 2C	AK215527|Itm2c|64294|integral membrane protein 2C
mm9_v1_chr19_+_34658016_34658052	0.004388	NKX6-1,2.p2	AK153226|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	NM_010501|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK077459|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK151032|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC089563|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	L32974|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC003804|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3
mm9_v1_chr1_-_186669499_186669729	0.00311441	NKX6-1,2.p2	AK178160|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK180823|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC006888|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC042686|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK002874|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK051230|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK078650|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	NM_133684|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK017150|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2
mm9_v1_chr6_-_123483423_123483423	0.00248881	NKX6-1,2.p2	NM_001104635|Vmn2r21|546912|vomeronasal 2, receptor 21
mm9_v1_chr15_+_99543952_99544029	0.00245305	NKX6-1,2.p2	AK190322|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr7_-_134563059_134563065	0.000629495	NKX6-1,2.p2	BC038680|Zfp688|69234|zinc finger protein 688
mm9_v1_chr2_-_171868868_171868965	0.000611777	NKX6-1,2.p2	BC094540|Cbln4|228942|cerebellin 4 precursor protein	AK032621|Cbln4|228942|cerebellin 4 precursor protein	NM_175631|Cbln4|228942|cerebellin 4 precursor protein
mm9_v1_chr1_-_134439500_134439516	0.000439701	NKX6-1,2.p2	AK147602|Cntn2|21367|contactin 2	NM_177129|Cntn2|21367|contactin 2
mm9_v1_chr1_+_173612173_173612224	0.000151259	NKX6-1,2.p2	X17501|Cd48|12506|CD48 antigen	X53526|Cd48|12506|CD48 antigen	AK007741|Cd48|12506|CD48 antigen	NM_007649|Cd48|12506|CD48 antigen	AK151601|Cd48|12506|CD48 antigen	AB196820|Cd48|12506|CD48 antigen	AB196821|Cd48|12506|CD48 antigen	AB196822|Cd48|12506|CD48 antigen	AB196823|Cd48|12506|CD48 antigen
