mm9_v1_chrX_+_7496899_7497045	182.767	RFX1..5_RFXANK_RFXAP.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chr9_-_60535699_60535786	150.267	RFX1..5_RFXANK_RFXAP.p2	BC016574|Lrrc49|102747|leucine rich repeat containing 49	AK041627|Lrrc49|102747|leucine rich repeat containing 49	AK049268|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr10_+_34017221_34017318	99.331	RFX1..5_RFXANK_RFXAP.p2	NM_030203|Tspyl4|72480|TSPY-like 4	AK034070|Tspyl4|72480|TSPY-like 4	AK158197|Tspyl4|72480|TSPY-like 4	BC017540|Tspyl4|72480|TSPY-like 4	BC034656|Tspyl4|72480|TSPY-like 4	AK030740|Tspyl4|72480|TSPY-like 4	AK034414|Tspyl4|72480|TSPY-like 4	AK020999|Tspyl4|72480|TSPY-like 4
mm9_v1_chr12_-_73509668_73509745	87.579	RFX1..5_RFXANK_RFXAP.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr12_-_73509537_73509656	87.0424	RFX1..5_RFXANK_RFXAP.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr14_-_9142289_9142295	86.6555	RFX1..5_RFXANK_RFXAP.p2	BC055107|Fam107a|268709|family with sequence similarity 107, member A	NM_183187|Fam107a|268709|family with sequence similarity 107, member A	AK165722|Fam107a|268709|family with sequence similarity 107, member A
mm9_v1_chr11_-_70846926_70847014	78.5117	RFX1..5_RFXANK_RFXAP.p2	AJ271140|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	BC069976|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK083923|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK018106|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr4_+_122860705_122860828	73.5428	RFX1..5_RFXANK_RFXAP.p2	AK032591|Hpcal4|170638|hippocalcin-like 4	NM_174998|Hpcal4|170638|hippocalcin-like 4
mm9_v1_chr11_-_70847078_70847118	71.9985	RFX1..5_RFXANK_RFXAP.p2	NM_134022|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr9_-_60535841_60535940	70.8596	RFX1..5_RFXANK_RFXAP.p2	AK085022|Lrrc49|102747|leucine rich repeat containing 49	NM_001146046|Lrrc49|102747|leucine rich repeat containing 49	NM_145616|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chrX_+_133527693_133527841	70.5407	RFX1..5_RFXANK_RFXAP.p2	NM_001035509|Zcchc18|66995|zinc finger, CCHC domain containing 18	NM_001035510|Zcchc18|66995|zinc finger, CCHC domain containing 18	NM_025893|Zcchc18|66995|zinc finger, CCHC domain containing 18	AK005317|Zcchc18|66995|zinc finger, CCHC domain containing 18	BC017627|Zcchc18|66995|zinc finger, CCHC domain containing 18	AK134856|Zcchc18|66995|zinc finger, CCHC domain containing 18
mm9_v1_chr5_+_31117077_31117214	68.0752	RFX1..5_RFXANK_RFXAP.p2	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr17_+_27822162_27822200	68.0477	RFX1..5_RFXANK_RFXAP.p2	AK043967|Pacsin1|23969|protein kinase C and casein kinase substrate in neurons 1	NM_178365|Pacsin1|23969|protein kinase C and casein kinase substrate in neurons 1
mm9_v1_chr10_+_74500008_74500039	67.7461	RFX1..5_RFXANK_RFXAP.p2	AK046113|Rab36|76877|RAB36, member RAS oncogene family
mm9_v1_chr17_+_46390828_46391138	66.9409	RFX1..5_RFXANK_RFXAP.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr7_+_17530050_17530063	61.4933	RFX1..5_RFXANK_RFXAP.p2	AK143183|Pnmal2|434128|PNMA-like 2
mm9_v1_chr3_+_82162091_82162153	60.6305	RFX1..5_RFXANK_RFXAP.p2	AK135823|Mtap9|213582|microtubule-associated protein 9	BC087935|Mtap9|213582|microtubule-associated protein 9	AK147287|Mtap9|213582|microtubule-associated protein 9	AK147416|Mtap9|213582|microtubule-associated protein 9	BC061216|Mtap9|213582|microtubule-associated protein 9	AK030527|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr7_+_17529961_17530046	60.3376	RFX1..5_RFXANK_RFXAP.p2	AK140282|Pnmal2|434128|PNMA-like 2	NM_001099636|Pnmal2|434128|PNMA-like 2
mm9_v1_chrX_+_33735898_33735993	58.0157	RFX1..5_RFXANK_RFXAP.p2	NM_028325|Zcchc12|72693|zinc finger, CCHC domain containing 12	BC049071|Zcchc12|72693|zinc finger, CCHC domain containing 12	BC055714|Zcchc12|72693|zinc finger, CCHC domain containing 12	AK012833|Zcchc12|72693|zinc finger, CCHC domain containing 12
mm9_v1_chr18_-_43847367_43847426	57.4535	RFX1..5_RFXANK_RFXAP.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr7_-_147268395_147268472	57.3349	RFX1..5_RFXANK_RFXAP.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr7_+_106416854_106416924	56.6602	RFX1..5_RFXANK_RFXAP.p2	NM_001043355|Mtap6|17760|microtubule-associated protein 6	AK154455|Mtap6|17760|microtubule-associated protein 6	Y16032|Mtap6|17760|microtubule-associated protein 6
mm9_v1_chr11_+_87574041_87574047	56.4237	RFX1..5_RFXANK_RFXAP.p2	AK043747|Bzrap1|207777|benzodiazepine receptor associated protein 1	NM_172449|Bzrap1|207777|benzodiazepine receptor associated protein 1
mm9_v1_chr10_+_20672352_20672469	56.1538	RFX1..5_RFXANK_RFXAP.p2	AK080373|Ahi1|52906|Abelson helper integration site 1	NM_026203|Ahi1|52906|Abelson helper integration site 1	AK005991|Ahi1|52906|Abelson helper integration site 1	AK013997|Ahi1|52906|Abelson helper integration site 1	AK019416|Ahi1|52906|Abelson helper integration site 1	BC106130|Ahi1|52906|Abelson helper integration site 1	BC065146|Ahi1|52906|Abelson helper integration site 1	AK036336|Ahi1|52906|Abelson helper integration site 1	AY133241|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr7_-_147268150_147268199	54.6935	RFX1..5_RFXANK_RFXAP.p2	BC049663|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190386|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr3_+_82162037_82162075	54.199	RFX1..5_RFXANK_RFXAP.p2	AK162555|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr4_+_43681807_43681971	53.9095	RFX1..5_RFXANK_RFXAP.p2	AK029713|Tmem8b|242409|transmembrane protein 8B	NM_001085508|Tmem8b|242409|transmembrane protein 8B	BC147569|Tmem8b|242409|transmembrane protein 8B	BC147574|Tmem8b|242409|transmembrane protein 8B	BC151067|Tmem8b|242409|transmembrane protein 8B	BC151070|Tmem8b|242409|transmembrane protein 8B
mm9_v1_chr3_+_124023954_124024027	53.8642	RFX1..5_RFXANK_RFXAP.p2	NM_146140|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK052946|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK048118|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK083053|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK044115|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC024829|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC027120|Tram1l1|229801|translocation associated membrane protein 1-like 1
mm9_v1_chr3_+_82161952_82161996	53.5747	RFX1..5_RFXANK_RFXAP.p2	AK138540|Mtap9|213582|microtubule-associated protein 9	AK038737|Mtap9|213582|microtubule-associated protein 9	NM_001081230|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr2_-_73613381_73613446	53.1091	RFX1..5_RFXANK_RFXAP.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr19_-_4906607_4906628	51.8858	RFX1..5_RFXANK_RFXAP.p2	AK037753|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	BC076577|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK161343|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK045850|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK168901|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	NM_001033128|Bbs1|52028|Bardet-Biedl syndrome 1 (human)
mm9_v1_chr2_+_121115337_121115465	51.5402	RFX1..5_RFXANK_RFXAP.p2	AF182213|Mtap1a|17754|microtubule-associated protein 1 A	NM_032393|Mtap1a|17754|microtubule-associated protein 1 A	AK044057|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr15_-_33617572_33617639	51.3243	RFX1..5_RFXANK_RFXAP.p2	AK087510|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	AK173253|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	BC079547|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	NM_001085421|Tspyl5|239364|testis-specific protein, Y-encoded-like 5
mm9_v1_chr5_-_115263896_115263992	50.3985	RFX1..5_RFXANK_RFXAP.p2	AK165632|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene	AK087533|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene	AK018264|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene	AK005199|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene	BC061238|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene	AK161363|1500011B03Rik|66236|RIKEN cDNA 1500011B03 gene
mm9_v1_chr9_-_7176964_7177059	49.3626	RFX1..5_RFXANK_RFXAP.p2	BC088991|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	AK045978|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	AK084796|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	AK032860|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	AK046538|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	DQ104402|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	NM_029851|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1
mm9_v1_chr3_-_126701367_126701380	49.1388	RFX1..5_RFXANK_RFXAP.p2	AK032060|Ank2|109676|ankyrin 2, brain	NM_178655|Ank2|109676|ankyrin 2, brain
mm9_v1_chr16_-_59639164_59639244	48.8091	RFX1..5_RFXANK_RFXAP.p2	NM_019665|Arl6|56297|ADP-ribosylation factor-like 6	AK158832|Arl6|56297|ADP-ribosylation factor-like 6
mm9_v1_chr17_-_31414288_31414300	48.6819	RFX1..5_RFXANK_RFXAP.p2	AB006535|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	BC049584|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	NM_025290|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)
mm9_v1_chr17_-_31414199_31414284	48.4134	RFX1..5_RFXANK_RFXAP.p2	DQ141549|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141550|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141551|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141553|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141554|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141555|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141556|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	AK005739|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)
mm9_v1_chr2_-_91284778_91284823	46.8566	RFX1..5_RFXANK_RFXAP.p2	BC089006|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK164320|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC085239|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK045977|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	NM_175123|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC032255|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr5_+_125048757_125048805	46.6303	RFX1..5_RFXANK_RFXAP.p2	AK031829|Tctn2|67978|tectonic family member 2	NM_026486|Tctn2|67978|tectonic family member 2	DQ278869|Tctn2|67978|tectonic family member 2	AK012720|Tctn2|67978|tectonic family member 2	AK014476|Tctn2|67978|tectonic family member 2	AK165102|Tctn2|67978|tectonic family member 2	AK083080|Tctn2|67978|tectonic family member 2	AK032378|Tctn2|67978|tectonic family member 2	AK087856|Tctn2|67978|tectonic family member 2	BC058375|Tctn2|67978|tectonic family member 2
mm9_v1_chr16_-_59638878_59638986	46.5154	RFX1..5_RFXANK_RFXAP.p2	AF031903|Arl6|56297|ADP-ribosylation factor-like 6	AK152980|Arl6|56297|ADP-ribosylation factor-like 6	AK160666|Arl6|56297|ADP-ribosylation factor-like 6	BC018497|Arl6|56297|ADP-ribosylation factor-like 6
mm9_v1_chr16_-_59638990_59639024	46.0168	RFX1..5_RFXANK_RFXAP.p2	AK003778|Arl6|56297|ADP-ribosylation factor-like 6
mm9_v1_chr10_+_74499810_74499858	45.7313	RFX1..5_RFXANK_RFXAP.p2	AK043946|Rab36|76877|RAB36, member RAS oncogene family	AK018269|Rab36|76877|RAB36, member RAS oncogene family	AK038445|Rab36|76877|RAB36, member RAS oncogene family	AK087892|Rab36|76877|RAB36, member RAS oncogene family	AK163455|Rab36|76877|RAB36, member RAS oncogene family	NM_029781|Rab36|76877|RAB36, member RAS oncogene family	BC119094|Rab36|76877|RAB36, member RAS oncogene family	BC119098|Rab36|76877|RAB36, member RAS oncogene family
mm9_v1_chr3_+_13946371_13946410	45.5747	RFX1..5_RFXANK_RFXAP.p2	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr7_-_4498168_4498168	45.3913	RFX1..5_RFXANK_RFXAP.p2	BC047148|Syt5|53420|synaptotagmin V	NM_016908|Syt5|53420|synaptotagmin V
mm9_v1_chr14_-_71028756_71028866	45.0475	RFX1..5_RFXANK_RFXAP.p2	AK162866|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr1_-_89406861_89406998	44.9109	RFX1..5_RFXANK_RFXAP.p2	AK138433|Ngef|53972|neuronal guanine nucleotide exchange factor	AY038025|Ngef|53972|neuronal guanine nucleotide exchange factor	AJ238898|Ngef|53972|neuronal guanine nucleotide exchange factor	NM_019867|Ngef|53972|neuronal guanine nucleotide exchange factor
mm9_v1_chr7_-_112717810_112717827	44.2993	RFX1..5_RFXANK_RFXAP.p2	AK075730|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1
mm9_v1_chr2_-_91284827_91284865	43.9117	RFX1..5_RFXANK_RFXAP.p2	AK018339|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC049648|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr10_-_38853662_38853700	43.5524	RFX1..5_RFXANK_RFXAP.p2	BC094255|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006431|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006353|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	NM_183254|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene
mm9_v1_chr11_-_4060222_4060295	43.1043	RFX1..5_RFXANK_RFXAP.p2	AK076934|Ccdc157|216516|coiled-coil domain containing 157	AK143216|Ccdc157|216516|coiled-coil domain containing 157	AK220409|Ccdc157|216516|coiled-coil domain containing 157	AK133165|Ccdc157|216516|coiled-coil domain containing 157	NM_001164620|Ccdc157|216516|coiled-coil domain containing 157	NM_177616|Ccdc157|216516|coiled-coil domain containing 157
mm9_v1_chr15_+_97998282_97998326	43.0744	RFX1..5_RFXANK_RFXAP.p2	BC090621|AI836003|239650|expressed sequence AI836003
mm9_v1_chr1_-_38851746_38851816	42.231	RFX1..5_RFXANK_RFXAP.p2	AK013739|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2
mm9_v1_chr9_+_82723787_82723813	42.0663	RFX1..5_RFXANK_RFXAP.p2	AJ242722|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chrX_+_45976916_45976963	41.6961	RFX1..5_RFXANK_RFXAP.p2	AK051145|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AK148277|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr17_-_36116411_36116411	41.6755	RFX1..5_RFXANK_RFXAP.p2	NM_001165892|Prr3|75210|proline-rich polypeptide 3	NM_145487|Prr3|75210|proline-rich polypeptide 3
mm9_v1_chr15_-_78971563_78971688	41.5682	RFX1..5_RFXANK_RFXAP.p2	BC068203|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC096672|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116891|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116893|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144714|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144715|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK030004|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK006539|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK007028|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	NM_138581|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene
mm9_v1_chr14_+_60997104_60997126	41.3517	RFX1..5_RFXANK_RFXAP.p2	NM_001164705|Fam123a|72125|family with sequence similarity 123, member A	NM_028113|Fam123a|72125|family with sequence similarity 123, member A
mm9_v1_chr2_+_69485227_69485311	40.9711	RFX1..5_RFXANK_RFXAP.p2	AK006743|Bbs5|72569|Bardet-Biedl syndrome 5 (human)	BC061031|Bbs5|72569|Bardet-Biedl syndrome 5 (human)	AK012283|Bbs5|72569|Bardet-Biedl syndrome 5 (human)	NM_028284|Bbs5|72569|Bardet-Biedl syndrome 5 (human)
mm9_v1_chr11_+_78139476_78139615	40.1304	RFX1..5_RFXANK_RFXAP.p2	AJ132391|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr4_+_151712739_151712761	40.0305	RFX1..5_RFXANK_RFXAP.p2	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chr9_+_20836560_20836569	39.9484	RFX1..5_RFXANK_RFXAP.p2	AK135040|Icam5|15898|intercellular adhesion molecule 5, telencephalin
mm9_v1_chr4_+_125735850_125735887	39.5162	RFX1..5_RFXANK_RFXAP.p2	AB154826|Oscp1|230751|organic solute carrier partner 1	BC045150|Oscp1|230751|organic solute carrier partner 1	AK077909|Oscp1|230751|organic solute carrier partner 1
mm9_v1_chr4_+_137237557_137237628	39.4465	RFX1..5_RFXANK_RFXAP.p2	NM_001081155|Rap1gap|110351|Rap1 GTPase-activating protein	BC052065|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr6_+_38331516_38331524	39.4442	RFX1..5_RFXANK_RFXAP.p2	AK035185|Ttc26|264134|tetratricopeptide repeat domain 26	BC066060|Ttc26|264134|tetratricopeptide repeat domain 26	NM_153600|Ttc26|264134|tetratricopeptide repeat domain 26	BC031513|Ttc26|264134|tetratricopeptide repeat domain 26	BC066087|Ttc26|264134|tetratricopeptide repeat domain 26
mm9_v1_chrX_+_45976650_45976756	39.101	RFX1..5_RFXANK_RFXAP.p2	AF076981|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535150|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535151|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	NM_011398|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr9_-_26962964_26963002	39.0326	RFX1..5_RFXANK_RFXAP.p2	AJ300304|Jam3|83964|junction adhesion molecule 3	AK003326|Jam3|83964|junction adhesion molecule 3	AK013156|Jam3|83964|junction adhesion molecule 3	AK032833|Jam3|83964|junction adhesion molecule 3	NM_023277|Jam3|83964|junction adhesion molecule 3	BC024357|Jam3|83964|junction adhesion molecule 3	AK008187|Jam3|83964|junction adhesion molecule 3	AK160648|Jam3|83964|junction adhesion molecule 3
mm9_v1_chr5_-_103640272_103640352	38.9253	RFX1..5_RFXANK_RFXAP.p2	AK036275|Mapk10|26414|mitogen-activated protein kinase 10	BC046625|Mapk10|26414|mitogen-activated protein kinase 10	AK163206|Mapk10|26414|mitogen-activated protein kinase 10	AK076990|Mapk10|26414|mitogen-activated protein kinase 10	BC026697|Mapk10|26414|mitogen-activated protein kinase 10	AK082242|Mapk10|26414|mitogen-activated protein kinase 10	NM_001081567|Mapk10|26414|mitogen-activated protein kinase 10	NM_009158|Mapk10|26414|mitogen-activated protein kinase 10
mm9_v1_chr7_-_6683113_6683136	38.7587	RFX1..5_RFXANK_RFXAP.p2	BC085183|Peg3|18616|paternally expressed 3	BC072661|Peg3|18616|paternally expressed 3	AB003040|Peg3|18616|paternally expressed 3	AK044602|Peg3|18616|paternally expressed 3	AK053523|Peg3|18616|paternally expressed 3	AK141217|Peg3|18616|paternally expressed 3	NM_008817|Peg3|18616|paternally expressed 3	AK163845|Peg3|18616|paternally expressed 3
mm9_v1_chr4_-_119088052_119088125	38.5587	RFX1..5_RFXANK_RFXAP.p2	AK078362|Ccdc30|73332|coiled-coil domain containing 30	BC114436|Ccdc30|73332|coiled-coil domain containing 30	AK163185|Ccdc30|73332|coiled-coil domain containing 30	AK225009|Ccdc30|73332|coiled-coil domain containing 30	AK005616|Ccdc30|73332|coiled-coil domain containing 30	AK148014|Ccdc30|73332|coiled-coil domain containing 30	AK225018|Ccdc30|73332|coiled-coil domain containing 30	AK079015|Ccdc30|73332|coiled-coil domain containing 30	NM_029286|Ccdc30|73332|coiled-coil domain containing 30
mm9_v1_chr8_-_73987384_73987575	38.406	RFX1..5_RFXANK_RFXAP.p2	AK178916|Abhd8|64296|abhydrolase domain containing 8	AK212822|Abhd8|64296|abhydrolase domain containing 8	BC026540|Abhd8|64296|abhydrolase domain containing 8	AK037669|Abhd8|64296|abhydrolase domain containing 8	AK003090|Abhd8|64296|abhydrolase domain containing 8	AB030191|Abhd8|64296|abhydrolase domain containing 8	AK080618|Abhd8|64296|abhydrolase domain containing 8	AK155503|Abhd8|64296|abhydrolase domain containing 8	NM_022419|Abhd8|64296|abhydrolase domain containing 8
mm9_v1_chr3_-_89049088_89049120	38.286	RFX1..5_RFXANK_RFXAP.p2	AK132368|Trim46|360213|tripartite motif-containing 46	AK170904|Trim46|360213|tripartite motif-containing 46	NM_001039466|Trim46|360213|tripartite motif-containing 46
mm9_v1_chr10_+_41210244_41210283	38.1687	RFX1..5_RFXANK_RFXAP.p2	NM_028430|Ppil6|73075|peptidylprolyl isomerase (cyclophilin)-like 6	BC147756|Ppil6|73075|peptidylprolyl isomerase (cyclophilin)-like 6	BC147757|Ppil6|73075|peptidylprolyl isomerase (cyclophilin)-like 6	AK013818|Ppil6|73075|peptidylprolyl isomerase (cyclophilin)-like 6
mm9_v1_chr4_+_125735808_125735847	38.1635	RFX1..5_RFXANK_RFXAP.p2	NM_172701|Oscp1|230751|organic solute carrier partner 1	AK077467|Oscp1|230751|organic solute carrier partner 1	AB286960|Oscp1|230751|organic solute carrier partner 1
mm9_v1_chr11_-_87172419_87172533	37.8117	RFX1..5_RFXANK_RFXAP.p2	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr14_+_60997156_60997209	37.7693	RFX1..5_RFXANK_RFXAP.p2	BC056350|Fam123a|72125|family with sequence similarity 123, member A	AK139177|Fam123a|72125|family with sequence similarity 123, member A	AK032651|Fam123a|72125|family with sequence similarity 123, member A	AK011185|Fam123a|72125|family with sequence similarity 123, member A
mm9_v1_chr13_+_24936973_24937045	37.6645	RFX1..5_RFXANK_RFXAP.p2	AK019624|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene	NM_001081051|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene	AK051381|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene	AK122246|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene
mm9_v1_chrX_+_45976982_45977308	37.2772	RFX1..5_RFXANK_RFXAP.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr5_-_149740213_149740268	37.0663	RFX1..5_RFXANK_RFXAP.p2	NM_153572|Katnal1|231912|katanin p60 subunit A-like 1
mm9_v1_chr11_-_61267383_61267510	36.8189	RFX1..5_RFXANK_RFXAP.p2	AB013097|Rnf112|22671|ring finger protein 112	BC013139|Rnf112|22671|ring finger protein 112	NM_009548|Rnf112|22671|ring finger protein 112	BC037118|Rnf112|22671|ring finger protein 112	AK131651|Rnf112|22671|ring finger protein 112
mm9_v1_chr15_-_84387921_84388066	36.748	RFX1..5_RFXANK_RFXAP.p2	BC058638|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr15_+_97998090_97998244	36.653	RFX1..5_RFXANK_RFXAP.p2	AK080988|AI836003|239650|expressed sequence AI836003	NM_177716|AI836003|239650|expressed sequence AI836003
mm9_v1_chr11_+_53380870_53380943	36.5384	RFX1..5_RFXANK_RFXAP.p2	AK161223|Kif3a|16568|kinesin family member 3A	NM_008443|Kif3a|16568|kinesin family member 3A	D12645|Kif3a|16568|kinesin family member 3A	AK161920|Kif3a|16568|kinesin family member 3A	AK169425|Kif3a|16568|kinesin family member 3A	BC052707|Kif3a|16568|kinesin family member 3A	BC044720|Kif3a|16568|kinesin family member 3A	AK147078|Kif3a|16568|kinesin family member 3A	BC023936|Kif3a|16568|kinesin family member 3A
mm9_v1_chr15_-_84388113_84388233	36.334	RFX1..5_RFXANK_RFXAP.p2	AK083881|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr8_+_14777772_14777775	36.086	RFX1..5_RFXANK_RFXAP.p2	AK033077|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr17_+_80689536_80689571	35.9231	RFX1..5_RFXANK_RFXAP.p2	AY367765|Morn2|378462|MORN repeat containing 2	NM_194269|Morn2|378462|MORN repeat containing 2	BC037365|Morn2|378462|MORN repeat containing 2
mm9_v1_chr7_+_3303657_3303670	35.6934	RFX1..5_RFXANK_RFXAP.p2	AK144419|Prkcc|18752|protein kinase C, gamma	NM_011102|Prkcc|18752|protein kinase C, gamma
mm9_v1_chr7_+_3303770_3303847	35.476	RFX1..5_RFXANK_RFXAP.p2	BC111807|Prkcc|18752|protein kinase C, gamma	X67129|Prkcc|18752|protein kinase C, gamma
mm9_v1_chr18_+_23656024_23656160	35.2335	RFX1..5_RFXANK_RFXAP.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chrX_-_7709452_7709736	35.0608	RFX1..5_RFXANK_RFXAP.p2	AF513713|Wdr13|73447|WD repeat domain 13	BC125287|Wdr13|73447|WD repeat domain 13	BC120553|Wdr13|73447|WD repeat domain 13	AK017549|Wdr13|73447|WD repeat domain 13	AF353243|Wdr13|73447|WD repeat domain 13	BC037502|Wdr13|73447|WD repeat domain 13	BC108332|Wdr13|73447|WD repeat domain 13
mm9_v1_chr6_-_124813720_124813826	35.0486	RFX1..5_RFXANK_RFXAP.p2	AK144543|Gpr162|14788|G protein-coupled receptor 162	AK158847|Gpr162|14788|G protein-coupled receptor 162	AK134941|Gpr162|14788|G protein-coupled receptor 162	BC016413|Gpr162|14788|G protein-coupled receptor 162
mm9_v1_chr15_-_84388245_84388282	34.7151	RFX1..5_RFXANK_RFXAP.p2	BC094559|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like	NM_177630|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr12_+_30213224_30213265	34.5989	RFX1..5_RFXANK_RFXAP.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr3_-_57651621_57651757	34.5117	RFX1..5_RFXANK_RFXAP.p2	NM_019410|Pfn2|18645|profilin 2
mm9_v1_chr9_+_47338255_47338425	33.6126	RFX1..5_RFXANK_RFXAP.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr8_+_41393330_41393406	33.4492	RFX1..5_RFXANK_RFXAP.p2	NM_030110|Efha2|78506|EF-hand domain family, member A2
mm9_v1_chr6_-_122289630_122289670	33.4238	RFX1..5_RFXANK_RFXAP.p2	S73882|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73883|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73884|Phc1|13619|polyhomeotic-like 1 (Drosophila)	BC046535|Phc1|13619|polyhomeotic-like 1 (Drosophila)	AK167590|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr19_-_46401618_46401645	33.3063	RFX1..5_RFXANK_RFXAP.p2	BC057353|Psd|73728|pleckstrin and Sec7 domain containing	NM_028627|Psd|73728|pleckstrin and Sec7 domain containing
mm9_v1_chr13_+_24937049_24937086	33.0967	RFX1..5_RFXANK_RFXAP.p2	BC115723|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene	BC115940|D130043K22Rik|210108|RIKEN cDNA D130043K22 gene
mm9_v1_chr7_-_31836457_31836500	33.0722	RFX1..5_RFXANK_RFXAP.p2	NM_022007|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	AK004113|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	BC048737|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	BC061101|Fxyd7|57780|FXYD domain-containing ion transport regulator 7
mm9_v1_chr7_-_99785544_99785651	32.8365	RFX1..5_RFXANK_RFXAP.p2	AK048925|Ankrd42|73845|ankyrin repeat domain 42	AK029888|Ankrd42|73845|ankyrin repeat domain 42	AK133339|Ankrd42|73845|ankyrin repeat domain 42	AK033599|Ankrd42|73845|ankyrin repeat domain 42	BC100433|Ankrd42|73845|ankyrin repeat domain 42	AK029511|Ankrd42|73845|ankyrin repeat domain 42	NM_028665|Ankrd42|73845|ankyrin repeat domain 42
mm9_v1_chr8_+_125736728_125736783	32.8295	RFX1..5_RFXANK_RFXAP.p2	AK028607|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene	NM_177279|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene	AK049895|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene	BC059919|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene	AK076656|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene
mm9_v1_chr10_+_74429876_74429984	32.7723	RFX1..5_RFXANK_RFXAP.p2	NM_010311|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit	AK080716|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit
mm9_v1_chr16_+_14906698_14906846	32.6504	RFX1..5_RFXANK_RFXAP.p2	AK042748|Efcab1|66793|EF hand calcium binding domain 1	AK015866|Efcab1|66793|EF hand calcium binding domain 1	AK030381|Efcab1|66793|EF hand calcium binding domain 1	AK038735|Efcab1|66793|EF hand calcium binding domain 1	AK077722|Efcab1|66793|EF hand calcium binding domain 1	AK017267|Efcab1|66793|EF hand calcium binding domain 1	NM_025769|Efcab1|66793|EF hand calcium binding domain 1	AK015426|Efcab1|66793|EF hand calcium binding domain 1	AK043519|Efcab1|66793|EF hand calcium binding domain 1	BC085167|Efcab1|66793|EF hand calcium binding domain 1
mm9_v1_chr6_+_115803545_115803666	32.5392	RFX1..5_RFXANK_RFXAP.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr1_+_166205728_166205836	32.4646	RFX1..5_RFXANK_RFXAP.p2	BC060044|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	NM_029115|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK076640|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK149168|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK015464|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	BC048086|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene
mm9_v1_chr3_-_108339375_108339439	32.3551	RFX1..5_RFXANK_RFXAP.p2	AK139330|5330417C22Rik|229722|RIKEN cDNA 5330417C22 gene	NM_001033304|5330417C22Rik|229722|RIKEN cDNA 5330417C22 gene
mm9_v1_chr9_+_47338431_47338446	32.1445	RFX1..5_RFXANK_RFXAP.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr14_-_78936606_78936676	31.9042	RFX1..5_RFXANK_RFXAP.p2	NM_001164503|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chr19_+_5050805_5050813	31.8046	RFX1..5_RFXANK_RFXAP.p2	BC011277|Rin1|225870|Ras and Rab interactor 1	NM_145495|Rin1|225870|Ras and Rab interactor 1
mm9_v1_chr9_-_60535274_60535340	31.775	RFX1..5_RFXANK_RFXAP.p2	AK051325|Lrrc49|102747|leucine rich repeat containing 49	NM_001146047|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr6_+_83106397_83106458	31.7696	RFX1..5_RFXANK_RFXAP.p2	NM_027948|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene	AK005628|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene
mm9_v1_chr9_+_110379461_110379473	30.9674	RFX1..5_RFXANK_RFXAP.p2	NM_010628|Kif9|16578|kinesin family member 9
mm9_v1_chr6_+_83106466_83106494	30.4588	RFX1..5_RFXANK_RFXAP.p2	BC126949|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene
mm9_v1_chr15_+_78258993_78259251	30.3868	RFX1..5_RFXANK_RFXAP.p2	BC144818|Kctd17|72844|potassium channel tetramerisation domain containing 17	BC144820|Kctd17|72844|potassium channel tetramerisation domain containing 17	BC145799|Kctd17|72844|potassium channel tetramerisation domain containing 17	NM_001081367|Kctd17|72844|potassium channel tetramerisation domain containing 17
mm9_v1_chr9_+_110379481_110379600	30.3587	RFX1..5_RFXANK_RFXAP.p2	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chr3_-_94276817_94276835	30.2315	RFX1..5_RFXANK_RFXAP.p2	AK019569|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr16_+_49699314_49699432	30.2277	RFX1..5_RFXANK_RFXAP.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr11_-_29147217_29147312	30.0704	RFX1..5_RFXANK_RFXAP.p2	BC005731|Ccdc104|216618|coiled-coil domain containing 104	AK075858|Ccdc104|216618|coiled-coil domain containing 104	NM_025740|Ccdc104|216618|coiled-coil domain containing 104	AK010468|Ccdc104|216618|coiled-coil domain containing 104	AK016479|Ccdc104|216618|coiled-coil domain containing 104
mm9_v1_chr2_+_71819264_71819343	30.0073	RFX1..5_RFXANK_RFXAP.p2	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr3_-_36512237_36512327	29.9587	RFX1..5_RFXANK_RFXAP.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr9_+_82723591_82723695	29.8429	RFX1..5_RFXANK_RFXAP.p2	AK076594|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK013036|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK045436|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC046301|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC061099|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AF093135|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK014712|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK020448|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr18_-_32109233_32109289	29.754	RFX1..5_RFXANK_RFXAP.p2	BC070439|Gpr17|574402|G protein-coupled receptor 17	NM_001025381|Gpr17|574402|G protein-coupled receptor 17
mm9_v1_chr7_+_17545027_17545143	29.7218	RFX1..5_RFXANK_RFXAP.p2	AK079661|Pnmal1|71691|PNMA-like 1	BC048228|Pnmal1|71691|PNMA-like 1	NM_001007569|Pnmal1|71691|PNMA-like 1
mm9_v1_chr4_-_151851574_151851597	29.6569	RFX1..5_RFXANK_RFXAP.p2	BC039178|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	NM_010598|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	U31908|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr9_-_50535949_50536088	29.5791	RFX1..5_RFXANK_RFXAP.p2	AY549884|Dixdc1|330938|DIX domain containing 1	AK016205|Dixdc1|330938|DIX domain containing 1	BC048182|Dixdc1|330938|DIX domain containing 1	BC063085|Dixdc1|330938|DIX domain containing 1	AK164424|Dixdc1|330938|DIX domain containing 1	NM_178118|Dixdc1|330938|DIX domain containing 1
mm9_v1_chr1_-_60099916_60100030	29.3286	RFX1..5_RFXANK_RFXAP.p2	BC079669|Ica1l|70375|islet cell autoantigen 1-like	NM_027407|Ica1l|70375|islet cell autoantigen 1-like	AK029991|Ica1l|70375|islet cell autoantigen 1-like	AK165131|Ica1l|70375|islet cell autoantigen 1-like
mm9_v1_chr4_-_151851624_151851635	29.305	RFX1..5_RFXANK_RFXAP.p2	AK143166|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr9_-_121186287_121186314	29.2272	RFX1..5_RFXANK_RFXAP.p2	AK016524|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	AK132731|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	NM_177589|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	BC065094|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	AK043628|Ulk4|209012|unc-51-like kinase 4 (C. elegans)
mm9_v1_chr8_+_125736919_125736968	28.692	RFX1..5_RFXANK_RFXAP.p2	AK053679|4732415M23Rik|320869|RIKEN cDNA 4732415M23 gene
mm9_v1_chr10_+_105907394_105907408	28.5237	RFX1..5_RFXANK_RFXAP.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr9_-_54349409_54349432	28.2912	RFX1..5_RFXANK_RFXAP.p2	AK170274|Dmxl2|235380|Dmx-like 2	AK048831|Dmxl2|235380|Dmx-like 2	AK053672|Dmxl2|235380|Dmx-like 2	NM_172771|Dmxl2|235380|Dmx-like 2
mm9_v1_chr12_-_85489188_85489438	28.1602	RFX1..5_RFXANK_RFXAP.p2	BC116688|Pnma1|70481|paraneoplastic antigen MA1	BC116687|Pnma1|70481|paraneoplastic antigen MA1	AK017476|Pnma1|70481|paraneoplastic antigen MA1	AK028331|Pnma1|70481|paraneoplastic antigen MA1	AK136933|Pnma1|70481|paraneoplastic antigen MA1	NM_027438|Pnma1|70481|paraneoplastic antigen MA1
mm9_v1_chr17_+_28314083_28314176	28.1414	RFX1..5_RFXANK_RFXAP.p2	BC060611|Zfp523|224656|zinc finger protein 523
mm9_v1_chr11_+_61318701_61318705	28.1353	RFX1..5_RFXANK_RFXAP.p2	BC008113|B9d1|27078|B9 protein domain 1
mm9_v1_chr12_+_53800369_53800393	28.0727	RFX1..5_RFXANK_RFXAP.p2	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr12_-_112079127_112079148	27.8995	RFX1..5_RFXANK_RFXAP.p2	BC037614|Stk30|26448|serine/threonine kinase 30	BC049604|Stk30|26448|serine/threonine kinase 30	BC087925|Stk30|26448|serine/threonine kinase 30	AB022695|Stk30|26448|serine/threonine kinase 30	NM_011973|Stk30|26448|serine/threonine kinase 30
mm9_v1_chr5_+_137384005_137384101	27.8904	RFX1..5_RFXANK_RFXAP.p2	AK160464|Rabl5|67286|RAB, member of RAS oncogene family-like 5	BC009150|Rabl5|67286|RAB, member of RAS oncogene family-like 5	NM_026073|Rabl5|67286|RAB, member of RAS oncogene family-like 5	AK005820|Rabl5|67286|RAB, member of RAS oncogene family-like 5
mm9_v1_chr19_-_42160732_42160861	27.7039	RFX1..5_RFXANK_RFXAP.p2	AK180979|Morn4|226123|MORN repeat containing 4	AK214121|Morn4|226123|MORN repeat containing 4	BC023055|Morn4|226123|MORN repeat containing 4	AK159230|Morn4|226123|MORN repeat containing 4	AK154147|Morn4|226123|MORN repeat containing 4	NM_198108|Morn4|226123|MORN repeat containing 4
mm9_v1_chr18_-_77285981_77286025	27.611	RFX1..5_RFXANK_RFXAP.p2	BC056963|Katnal2|71206|katanin p60 subunit A-like 2	AK014074|Katnal2|71206|katanin p60 subunit A-like 2	BC069977|Katnal2|71206|katanin p60 subunit A-like 2
mm9_v1_chr15_+_36109284_36109284	27.2906	RFX1..5_RFXANK_RFXAP.p2	BC046313|Spag1|26942|sperm associated antigen 1	NM_012031|Spag1|26942|sperm associated antigen 1
mm9_v1_chr17_-_46281016_46281172	26.9665	RFX1..5_RFXANK_RFXAP.p2	AK165820|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	BC019423|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	AK006440|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	NM_029338|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)
mm9_v1_chr17_+_36116923_36116951	26.9019	RFX1..5_RFXANK_RFXAP.p2	BC010298|Gnl1|14670|guanine nucleotide binding protein-like 1	AK078187|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr12_-_73171976_73172111	26.8896	RFX1..5_RFXANK_RFXAP.p2	BC114990|Gpr135|238252|G protein-coupled receptor 135	BC115824|Gpr135|238252|G protein-coupled receptor 135	AY288425|Gpr135|238252|G protein-coupled receptor 135	BC148305|Gpr135|238252|G protein-coupled receptor 135	NM_181752|Gpr135|238252|G protein-coupled receptor 135	BC062104|Gpr135|238252|G protein-coupled receptor 135	BC139332|Gpr135|238252|G protein-coupled receptor 135	BC139335|Gpr135|238252|G protein-coupled receptor 135	AK141053|Gpr135|238252|G protein-coupled receptor 135	AK132237|Gpr135|238252|G protein-coupled receptor 135
mm9_v1_chr10_-_80464109_80464109	26.6238	RFX1..5_RFXANK_RFXAP.p2	AK158963|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	NM_001038655|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7
mm9_v1_chr10_-_79600131_79600131	26.5308	RFX1..5_RFXANK_RFXAP.p2	BC052075|Dos|100503659|downstream of Stk11	NM_001195268|Dos|100503659|downstream of Stk11
mm9_v1_chr1_+_163072784_163072870	26.5159	RFX1..5_RFXANK_RFXAP.p2	AK016757|Ankrd45|73844|ankyrin repeat domain 45	NM_028664|Ankrd45|73844|ankyrin repeat domain 45	BC049713|Ankrd45|73844|ankyrin repeat domain 45
mm9_v1_chr11_+_61318645_61318683	26.3557	RFX1..5_RFXANK_RFXAP.p2	AK010355|B9d1|27078|B9 protein domain 1	AB030483|B9d1|27078|B9 protein domain 1	NM_013717|B9d1|27078|B9 protein domain 1	AK003038|B9d1|27078|B9 protein domain 1	AK131701|B9d1|27078|B9 protein domain 1
mm9_v1_chr11_+_51817722_51817929	26.3426	RFX1..5_RFXANK_RFXAP.p2	AK046394|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166653|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166654|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166655|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166656|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_001166657|Cdkl3|213084|cyclin-dependent kinase-like 3	NM_153785|Cdkl3|213084|cyclin-dependent kinase-like 3	AK050990|Cdkl3|213084|cyclin-dependent kinase-like 3	AK078804|Cdkl3|213084|cyclin-dependent kinase-like 3	AK090045|Cdkl3|213084|cyclin-dependent kinase-like 3	AK045036|Cdkl3|213084|cyclin-dependent kinase-like 3	AK166428|Cdkl3|213084|cyclin-dependent kinase-like 3	AK045356|Cdkl3|213084|cyclin-dependent kinase-like 3	BC028871|Cdkl3|213084|cyclin-dependent kinase-like 3	AK186403|Cdkl3|213084|cyclin-dependent kinase-like 3	AK210497|Cdkl3|213084|cyclin-dependent kinase-like 3
mm9_v1_chr2_-_134469754_134469776	26.332	RFX1..5_RFXANK_RFXAP.p2	BC050918|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK033111|Tmx4|52837|thioredoxin-related transmembrane protein 4
mm9_v1_chr8_-_47060486_47060605	26.1152	RFX1..5_RFXANK_RFXAP.p2	BC107256|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK006501|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK156041|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	NM_001033148|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene
mm9_v1_chr4_-_61869579_61869584	26.1144	RFX1..5_RFXANK_RFXAP.p2	NM_009554|Zfp37|22696|zinc finger protein 37
mm9_v1_chr1_+_174451174_174451236	26.0688	RFX1..5_RFXANK_RFXAP.p2	BC150929|Ccdc19|71870|coiled-coil domain containing 19
mm9_v1_chr19_+_45635070_45635130	25.9321	RFX1..5_RFXANK_RFXAP.p2	BC027559|Dpcd|226162|deleted in primary ciliary dyskinesia	AK077347|Dpcd|226162|deleted in primary ciliary dyskinesia	NM_172639|Dpcd|226162|deleted in primary ciliary dyskinesia
mm9_v1_chr2_+_180954720_180954720	25.8043	RFX1..5_RFXANK_RFXAP.p2	BC051628|BC051628|332713|cDNA sequence BC051628	NM_199312|BC051628|332713|cDNA sequence BC051628
mm9_v1_chr1_-_59176902_59176978	25.7566	RFX1..5_RFXANK_RFXAP.p2	BC147243|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC147244|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK161697|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_001033449|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
mm9_v1_chr17_+_36116889_36116901	25.7272	RFX1..5_RFXANK_RFXAP.p2	NM_008136|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr7_+_19661548_19661579	25.2903	RFX1..5_RFXANK_RFXAP.p2	NM_010058|Dmwd|13401|dystrophia myotonica-containing WD repeat motif
mm9_v1_chr9_+_50425460_50425487	25.2767	RFX1..5_RFXANK_RFXAP.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr2_-_110790259_110790446	24.8717	RFX1..5_RFXANK_RFXAP.p2	NM_001128103|Ano3|228432|anoctamin 3	AK045930|Ano3|228432|anoctamin 3	NM_001081556|Ano3|228432|anoctamin 3
mm9_v1_chr9_+_82723410_82723412	24.8667	RFX1..5_RFXANK_RFXAP.p2	AK020170|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_001168240|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_022986|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr11_-_105805442_105805573	24.7718	RFX1..5_RFXANK_RFXAP.p2	AK169711|Cyb561|13056|cytochrome b-561	AK014395|Cyb561|13056|cytochrome b-561	NM_007805|Cyb561|13056|cytochrome b-561	U16297|Cyb561|13056|cytochrome b-561	BC006732|Cyb561|13056|cytochrome b-561	AK158978|Cyb561|13056|cytochrome b-561
mm9_v1_chr11_-_5965555_5965582	24.7142	RFX1..5_RFXANK_RFXAP.p2	BC024803|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	X63615|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	AK163698|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr8_+_55686133_55686133	24.636	RFX1..5_RFXANK_RFXAP.p2	AF395083|Spata4|69281|spermatogenesis associated 4	AF530515|Spata4|69281|spermatogenesis associated 4	AK005612|Spata4|69281|spermatogenesis associated 4	BC048650|Spata4|69281|spermatogenesis associated 4	NM_133711|Spata4|69281|spermatogenesis associated 4
mm9_v1_chr11_-_5965544_5965554	24.3727	RFX1..5_RFXANK_RFXAP.p2	BC080273|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr4_-_118293009_118293009	24.0732	RFX1..5_RFXANK_RFXAP.p2	NM_026789|Wdr65|68625|WD repeat domain 65
mm9_v1_chr2_-_29904342_29904416	23.8465	RFX1..5_RFXANK_RFXAP.p2	BC085113|Wdr34|71820|WD repeat domain 34	AK014304|Wdr34|71820|WD repeat domain 34	NM_001008498|Wdr34|71820|WD repeat domain 34
mm9_v1_chr16_+_38902431_38902466	23.7464	RFX1..5_RFXANK_RFXAP.p2	BC057555|Igsf11|207683|immunoglobulin superfamily, member 11	NM_170599|Igsf11|207683|immunoglobulin superfamily, member 11
mm9_v1_chr18_-_77286034_77286037	23.6081	RFX1..5_RFXANK_RFXAP.p2	AK017114|Katnal2|71206|katanin p60 subunit A-like 2	NM_027721|Katnal2|71206|katanin p60 subunit A-like 2	AK083612|Katnal2|71206|katanin p60 subunit A-like 2
mm9_v1_chrX_+_6644644_6644708	23.5328	RFX1..5_RFXANK_RFXAP.p2	NM_009651|Akap4|11643|A kinase (PRKA) anchor protein 4	U10341|Akap4|11643|A kinase (PRKA) anchor protein 4	BC130271|Akap4|11643|A kinase (PRKA) anchor protein 4
mm9_v1_chr5_-_150438750_150438824	23.4697	RFX1..5_RFXANK_RFXAP.p2	BC018378|Hsph1|15505|heat shock 105kDa/110kDa protein 1	D67017|Hsph1|15505|heat shock 105kDa/110kDa protein 1	L40406|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK146697|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr7_+_147080594_147081085	23.4332	RFX1..5_RFXANK_RFXAP.p2	AK147335|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	NM_177261|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AK090282|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AK046817|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AB257857|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AK147672|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AK147693|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	BC150787|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1	AJ580324|Kndc1|76484|kinase non-catalytic C-lobe domain (KIND) containing 1
mm9_v1_chr15_+_54577256_54577521	23.3907	RFX1..5_RFXANK_RFXAP.p2	AK081944|Nov|18133|nephroblastoma overexpressed gene	AK081310|Nov|18133|nephroblastoma overexpressed gene	AK136407|Nov|18133|nephroblastoma overexpressed gene	AK155048|Nov|18133|nephroblastoma overexpressed gene	BC003774|Nov|18133|nephroblastoma overexpressed gene	NM_010930|Nov|18133|nephroblastoma overexpressed gene	X96585|Nov|18133|nephroblastoma overexpressed gene	AK039481|Nov|18133|nephroblastoma overexpressed gene	Y09257|Nov|18133|nephroblastoma overexpressed gene
mm9_v1_chr7_-_116582511_116582566	23.3102	RFX1..5_RFXANK_RFXAP.p2	BC117798|Stk33|117229|serine/threonine kinase 33	BC117799|Stk33|117229|serine/threonine kinase 33	BC127158|Stk33|117229|serine/threonine kinase 33	AK014819|Stk33|117229|serine/threonine kinase 33	NM_054103|Stk33|117229|serine/threonine kinase 33
mm9_v1_chr5_-_150438704_150438747	23.2375	RFX1..5_RFXANK_RFXAP.p2	D67016|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK083179|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr5_-_150438856_150438925	23.2362	RFX1..5_RFXANK_RFXAP.p2	AK165046|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK160824|Hsph1|15505|heat shock 105kDa/110kDa protein 1	NM_013559|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr4_-_149148173_149148404	23.1106	RFX1..5_RFXANK_RFXAP.p2	AK017628|Slc25a33|70556|solute carrier family 25, member 33	BC011293|Slc25a33|70556|solute carrier family 25, member 33	AK157423|Slc25a33|70556|solute carrier family 25, member 33	NM_027460|Slc25a33|70556|solute carrier family 25, member 33
mm9_v1_chr11_-_72175341_72175381	23.0344	RFX1..5_RFXANK_RFXAP.p2	BC098181|Tekt1|21689|tektin 1	AK076858|Tekt1|21689|tektin 1	AF081947|Tekt1|21689|tektin 1	NM_011569|Tekt1|21689|tektin 1
mm9_v1_chr9_+_50425425_50425450	22.9673	RFX1..5_RFXANK_RFXAP.p2	NM_028300|Pih1d2|72614|PIH1 domain containing 2	AK080744|Pih1d2|72614|PIH1 domain containing 2	BC039645|Pih1d2|72614|PIH1 domain containing 2	AK012458|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr17_-_85489544_85489623	22.8443	RFX1..5_RFXANK_RFXAP.p2	AK083070|Prepl|213760|prolyl endopeptidase-like	BC004612|Prepl|213760|prolyl endopeptidase-like	AK028877|Prepl|213760|prolyl endopeptidase-like	AK163108|Prepl|213760|prolyl endopeptidase-like	AK020557|Prepl|213760|prolyl endopeptidase-like	AK050878|Prepl|213760|prolyl endopeptidase-like	NM_001163622|Prepl|213760|prolyl endopeptidase-like	NM_001163623|Prepl|213760|prolyl endopeptidase-like	NM_145984|Prepl|213760|prolyl endopeptidase-like	NM_001163624|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr12_+_112127468_112127521	22.8209	RFX1..5_RFXANK_RFXAP.p2	AK147592|Tecpr2|104859|tectonin beta-propeller repeat containing 2	NM_001081057|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK031736|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK129113|Tecpr2|104859|tectonin beta-propeller repeat containing 2
mm9_v1_chr3_-_105804304_105804414	22.7472	RFX1..5_RFXANK_RFXAP.p2	HM237137|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene	AK006407|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene	NM_029604|1700027A23Rik|100503311|RIKEN cDNA 1700027A23 gene
mm9_v1_chr17_+_85025803_85025818	22.7433	RFX1..5_RFXANK_RFXAP.p2	AK160259|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1
mm9_v1_chr5_-_143026961_143027030	22.5212	RFX1..5_RFXANK_RFXAP.p2	AK052964|Radil|231858|Ras association and DIL domains	AK038570|Radil|231858|Ras association and DIL domains	AK163852|Radil|231858|Ras association and DIL domains	AK154169|Radil|231858|Ras association and DIL domains	BC056483|Radil|231858|Ras association and DIL domains	AK173277|Radil|231858|Ras association and DIL domains	AK162917|Radil|231858|Ras association and DIL domains	NM_178702|Radil|231858|Ras association and DIL domains
mm9_v1_chr14_+_77556622_77556644	22.4161	RFX1..5_RFXANK_RFXAP.p2	AK051821|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1	NM_172813|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1	AK045500|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1
mm9_v1_chr14_-_119322244_119322388	22.2571	RFX1..5_RFXANK_RFXAP.p2	AK129256|Dzip1|66573|DAZ interacting protein 1	NM_025943|Dzip1|66573|DAZ interacting protein 1
mm9_v1_chr8_+_112017926_112017974	22.1551	RFX1..5_RFXANK_RFXAP.p2	AB029919|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	NM_019938|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138245|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138246|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1
mm9_v1_chr4_-_12098948_12098955	22.1055	RFX1..5_RFXANK_RFXAP.p2	BC020162|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr2_-_118082593_118082701	22.0891	RFX1..5_RFXANK_RFXAP.p2	BC125024|Fsip1|71313|fibrous sheath-interacting protein 1	AK017026|Fsip1|71313|fibrous sheath-interacting protein 1	AK005924|Fsip1|71313|fibrous sheath-interacting protein 1	AF448787|Fsip1|71313|fibrous sheath-interacting protein 1	NM_027759|Fsip1|71313|fibrous sheath-interacting protein 1
mm9_v1_chr18_+_63868337_63868349	21.9016	RFX1..5_RFXANK_RFXAP.p2	AK052730|Wdr7|104082|WD repeat domain 7	NM_001014981|Wdr7|104082|WD repeat domain 7
mm9_v1_chr2_+_28555680_28555693	21.8979	RFX1..5_RFXANK_RFXAP.p2	NM_001033874|Ak8|68870|adenylate kinase 8	AK004439|Ak8|68870|adenylate kinase 8	BC100481|Ak8|68870|adenylate kinase 8	BC109352|Ak8|68870|adenylate kinase 8
mm9_v1_chr2_-_5816381_5816442	21.819	RFX1..5_RFXANK_RFXAP.p2	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr4_-_12098960_12099006	21.6915	RFX1..5_RFXANK_RFXAP.p2	BC055848|Fam92a|68099|family with sequence similarity 92, member A	AK013129|Fam92a|68099|family with sequence similarity 92, member A	AK019574|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr4_-_102786828_102786903	21.6041	RFX1..5_RFXANK_RFXAP.p2	BC028975|Wdr78|242584|WD repeat domain 78	AK087151|E030030F06Rik|320382|RIKEN cDNA E030030F06 gene	NM_146254|Wdr78|242584|WD repeat domain 78
mm9_v1_chr6_+_29867012_29867023	21.5264	RFX1..5_RFXANK_RFXAP.p2	AK041004|Fam40b|320609|family with sequence similarity 40, member B	AK042073|Fam40b|320609|family with sequence similarity 40, member B	AK052271|Fam40b|320609|family with sequence similarity 40, member B	AK163706|Fam40b|320609|family with sequence similarity 40, member B	NM_001037740|Fam40b|320609|family with sequence similarity 40, member B	NM_177204|Fam40b|320609|family with sequence similarity 40, member B	BC147502|Fam40b|320609|family with sequence similarity 40, member B	BC172034|Fam40b|320609|family with sequence similarity 40, member B
mm9_v1_chr8_-_23916037_23916141	21.4915	RFX1..5_RFXANK_RFXAP.p2	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr2_+_21127350_21127413	21.468	RFX1..5_RFXANK_RFXAP.p2	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr18_+_52853332_52853357	21.4116	RFX1..5_RFXANK_RFXAP.p2	AF117733|Gykl1|14625|glycerol kinase-like 1	BC050968|Gykl1|14625|glycerol kinase-like 1	NM_010293|Gykl1|14625|glycerol kinase-like 1	BC119574|Gykl1|14625|glycerol kinase-like 1	AK076631|Gykl1|14625|glycerol kinase-like 1
mm9_v1_chr17_+_85025830_85025873	21.3404	RFX1..5_RFXANK_RFXAP.p2	BC030450|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	BC039070|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	NM_172256|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	AK008822|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1
mm9_v1_chr1_-_59176583_59176664	21.231	RFX1..5_RFXANK_RFXAP.p2	AK170118|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK167733|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_001037812|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
mm9_v1_chr5_-_137521896_137522032	21.1325	RFX1..5_RFXANK_RFXAP.p2	AK002225|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	M62418|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	NM_007457|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	BC052692|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr2_-_134469806_134469920	21.0979	RFX1..5_RFXANK_RFXAP.p2	BC138168|Tmx4|52837|thioredoxin-related transmembrane protein 4	BC138169|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK040779|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK147465|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK129301|Tmx4|52837|thioredoxin-related transmembrane protein 4	BC054558|Tmx4|52837|thioredoxin-related transmembrane protein 4	NM_029148|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK015667|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK053897|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK030696|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK172572|Tmx4|52837|thioredoxin-related transmembrane protein 4
mm9_v1_chr3_-_37211319_37211367	20.9818	RFX1..5_RFXANK_RFXAP.p2	BC060991|Cetn4|207175|centrin 4	BC087905|Cetn4|207175|centrin 4	AK090064|Cetn4|207175|centrin 4	AK131808|Cetn4|207175|centrin 4	AK078275|Cetn4|207175|centrin 4	AF362367|Cetn4|207175|centrin 4	NM_145825|Cetn4|207175|centrin 4
mm9_v1_chr19_-_60019266_60019313	20.9341	RFX1..5_RFXANK_RFXAP.p2	AK154916|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001033172|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr18_+_23962468_23962588	20.7635	RFX1..5_RFXANK_RFXAP.p2	NM_153058|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK038562|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK140595|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK040767|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045904|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148954|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046221|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC027056|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC035254|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC025804|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK050527|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148480|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046095|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK088734|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC028987|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045493|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr1_+_20941706_20941814	20.7418	RFX1..5_RFXANK_RFXAP.p2	NM_027974|Efhc1|71877|EF-hand domain (C-terminal) containing 1	AK006489|Efhc1|71877|EF-hand domain (C-terminal) containing 1	EU520262|Efhc1|71877|EF-hand domain (C-terminal) containing 1
mm9_v1_chr2_-_21126852_21126991	20.7175	RFX1..5_RFXANK_RFXAP.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr6_-_77929660_77929669	20.6911	RFX1..5_RFXANK_RFXAP.p2	NM_001109764|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	NM_009819|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	NM_145732|Ctnna2|12386|catenin (cadherin associated protein), alpha 2
mm9_v1_chr9_+_107950953_107951021	20.6838	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr16_+_32099870_32099906	20.4886	RFX1..5_RFXANK_RFXAP.p2	AK005324|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	NM_025892|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	AK007713|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene
mm9_v1_chr12_-_88067400_88067409	20.341	RFX1..5_RFXANK_RFXAP.p2	BC019148|Angel1|68737|angel homolog 1 (Drosophila)	AK143549|Angel1|68737|angel homolog 1 (Drosophila)	NM_144524|Angel1|68737|angel homolog 1 (Drosophila)
mm9_v1_chr8_-_28313004_28313018	20.2831	RFX1..5_RFXANK_RFXAP.p2	AK006984|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	BC052754|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	NM_029674|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1
mm9_v1_chr1_+_174451244_174451278	20.2533	RFX1..5_RFXANK_RFXAP.p2	NM_027972|Ccdc19|71870|coiled-coil domain containing 19	AK006449|Ccdc19|71870|coiled-coil domain containing 19	BC151048|Ccdc19|71870|coiled-coil domain containing 19	BC151055|Ccdc19|71870|coiled-coil domain containing 19
mm9_v1_chr13_+_43711165_43711165	20.2108	RFX1..5_RFXANK_RFXAP.p2	NM_183204|Rnf182|328234|ring finger protein 182
mm9_v1_chr8_-_4259126_4259300	20.1743	RFX1..5_RFXANK_RFXAP.p2	AK158759|Ctxn1|330695|cortexin 1	BC028881|Ctxn1|330695|cortexin 1	AK154120|Ctxn1|330695|cortexin 1	NM_183315|Ctxn1|330695|cortexin 1
mm9_v1_chr6_-_77929685_77929694	19.9574	RFX1..5_RFXANK_RFXAP.p2	AK158916|Ctnna2|12386|catenin (cadherin associated protein), alpha 2
mm9_v1_chr19_-_7016916_7016939	19.8231	RFX1..5_RFXANK_RFXAP.p2	AK143450|Gpr137|107173|G protein-coupled receptor 137	NM_001177361|Gpr137|107173|G protein-coupled receptor 137
mm9_v1_chr5_-_116102983_116102996	19.76	RFX1..5_RFXANK_RFXAP.p2	AK170295|Ccdc64|75665|coiled-coil domain containing 64
mm9_v1_chr11_-_6506056_6506056	19.7285	RFX1..5_RFXANK_RFXAP.p2	BC072589|Nacad|192950|NAC alpha domain containing	NM_001081652|Nacad|192950|NAC alpha domain containing
mm9_v1_chr4_-_155043283_155043335	19.7227	RFX1..5_RFXANK_RFXAP.p2	AK147940|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK081738|Mib2|76580|mindbomb homolog 2 (Drosophila)	NM_145124|Mib2|76580|mindbomb homolog 2 (Drosophila)
mm9_v1_chr3_-_30546739_30546790	19.6181	RFX1..5_RFXANK_RFXAP.p2	BC100519|Lrrc34|71827|leucine rich repeat containing 34	NM_027941|Lrrc34|71827|leucine rich repeat containing 34	AK005720|Lrrc34|71827|leucine rich repeat containing 34
mm9_v1_chr2_+_164648495_164648533	19.5538	RFX1..5_RFXANK_RFXAP.p2	AK010358|Zswim1|71971|zinc finger, SWIM domain containing 1	AK149816|Zswim1|71971|zinc finger, SWIM domain containing 1	AK150174|Zswim1|71971|zinc finger, SWIM domain containing 1
mm9_v1_chr6_-_124729735_124729744	19.5325	RFX1..5_RFXANK_RFXAP.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chr3_+_103772032_103772368	19.4824	RFX1..5_RFXANK_RFXAP.p2	AJ133721|Phtf1|18685|putative homeodomain transcription factor 1	NM_001163467|Phtf1|18685|putative homeodomain transcription factor 1	AJ242864|Phtf1|18685|putative homeodomain transcription factor 1	NM_001163468|Phtf1|18685|putative homeodomain transcription factor 1	NM_001163469|Phtf1|18685|putative homeodomain transcription factor 1	NM_013629|Phtf1|18685|putative homeodomain transcription factor 1	AK013292|Phtf1|18685|putative homeodomain transcription factor 1	AK019146|Phtf1|18685|putative homeodomain transcription factor 1	AK131629|Phtf1|18685|putative homeodomain transcription factor 1	AK088714|Phtf1|18685|putative homeodomain transcription factor 1	BC057340|Phtf1|18685|putative homeodomain transcription factor 1	BC060177|Phtf1|18685|putative homeodomain transcription factor 1	BC021147|Phtf1|18685|putative homeodomain transcription factor 1	BC050825|Phtf1|18685|putative homeodomain transcription factor 1
mm9_v1_chr2_-_5816330_5816380	19.4647	RFX1..5_RFXANK_RFXAP.p2	AF145254|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AF222748|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	BC005458|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK017615|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK136447|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr4_-_61869287_61869463	19.3556	RFX1..5_RFXANK_RFXAP.p2	AK032469|Zfp37|22696|zinc finger protein 37	BC063757|Zfp37|22696|zinc finger protein 37
mm9_v1_chr6_-_83106268_83106377	19.3508	RFX1..5_RFXANK_RFXAP.p2	AK006536|Wdr54|75659|WD repeat domain 54	BC083332|Wdr54|75659|WD repeat domain 54	AF053628|Wdr54|75659|WD repeat domain 54	AK154345|Wdr54|75659|WD repeat domain 54	NM_023790|Wdr54|75659|WD repeat domain 54
mm9_v1_chr16_+_3908975_3909105	19.0689	RFX1..5_RFXANK_RFXAP.p2	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chr15_-_66332402_66332471	19.0111	RFX1..5_RFXANK_RFXAP.p2	AF092208|Lrrc6|54562|leucine rich repeat containing 6 (testis)	BC046277|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK077124|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK016236|Lrrc6|54562|leucine rich repeat containing 6 (testis)	NM_019457|Lrrc6|54562|leucine rich repeat containing 6 (testis)
mm9_v1_chr5_+_34326081_34326346	18.9665	RFX1..5_RFXANK_RFXAP.p2	BC147444|Gm1673|381633|predicted gene 1673	BC147468|Gm1673|381633|predicted gene 1673	BC048625|Gm1673|381633|predicted gene 1673	AK141724|Gm1673|381633|predicted gene 1673	NM_001033458|Gm1673|381633|predicted gene 1673	BC100514|Gm1673|381633|predicted gene 1673	BC055794|Gm1673|381633|predicted gene 1673	AK131594|Gm1673|381633|predicted gene 1673
mm9_v1_chr19_+_6061181_6061301	18.9551	RFX1..5_RFXANK_RFXAP.p2	BC092256|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene	AF119498|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene	AK086863|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene	NM_013859|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene	AK164029|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene	BC019440|Znhit2-ps|29805|zinc finger, HIT domain containing 2, pseudogene
mm9_v1_chr7_-_90943328_90943348	18.8985	RFX1..5_RFXANK_RFXAP.p2	BC048079|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	AK006375|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	BC061016|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	NM_029335|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene
mm9_v1_chr1_-_174188554_174188554	18.8662	RFX1..5_RFXANK_RFXAP.p2	NM_013734|Atp1a4|27222|ATPase, Na+/K+ transporting, alpha 4 polypeptide
mm9_v1_chr10_-_68004607_68004622	18.8509	RFX1..5_RFXANK_RFXAP.p2	BC087900|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK006661|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK029622|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	NM_028491|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene
mm9_v1_chr4_-_61869471_61869486	18.8215	RFX1..5_RFXANK_RFXAP.p2	X89264|Zfp37|22696|zinc finger protein 37
mm9_v1_chr5_-_49280703_49280795	18.8095	RFX1..5_RFXANK_RFXAP.p2	AF453243|Kcnip4|80334|Kv channel interacting protein 4	AK165773|Kcnip4|80334|Kv channel interacting protein 4	AK049662|Kcnip4|80334|Kv channel interacting protein 4	DQ148503|Kcnip4|80334|Kv channel interacting protein 4	AK039048|Kcnip4|80334|Kv channel interacting protein 4	NM_030265|Kcnip4|80334|Kv channel interacting protein 4
mm9_v1_chr9_-_15432357_15432376	18.5813	RFX1..5_RFXANK_RFXAP.p2	AK030153|Ccdc67|234964|coiled-coil domain containing 67	NM_181816|Ccdc67|234964|coiled-coil domain containing 67
mm9_v1_chr4_-_43681677_43681730	18.3559	RFX1..5_RFXANK_RFXAP.p2	AK076680|4930412F15Rik|242408|RIKEN cDNA 4930412F15 gene	BC119804|4930412F15Rik|242408|RIKEN cDNA 4930412F15 gene	BC122881|4930412F15Rik|242408|RIKEN cDNA 4930412F15 gene	AK076646|4930412F15Rik|242408|RIKEN cDNA 4930412F15 gene	NM_175517|4930412F15Rik|242408|RIKEN cDNA 4930412F15 gene
mm9_v1_chr2_-_118529608_118529698	18.1169	RFX1..5_RFXANK_RFXAP.p2	NM_001081971|Gm1337|383787|predicted gene 1337
mm9_v1_chr9_+_47338449_47338455	18.0747	RFX1..5_RFXANK_RFXAP.p2	AK013775|Cadm1|54725|cell adhesion molecule 1	AB064265|Cadm1|54725|cell adhesion molecule 1	AB092414|Cadm1|54725|cell adhesion molecule 1	AB183399|Cadm1|54725|cell adhesion molecule 1	AB183400|Cadm1|54725|cell adhesion molecule 1	AB183401|Cadm1|54725|cell adhesion molecule 1	AB183402|Cadm1|54725|cell adhesion molecule 1	AY351388|Cadm1|54725|cell adhesion molecule 1	DQ279856|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr19_-_10076122_10076122	17.9084	RFX1..5_RFXANK_RFXAP.p2	NM_011913|Best1|24115|bestrophin 1
mm9_v1_chr4_-_91813911_91813924	17.9038	RFX1..5_RFXANK_RFXAP.p2	BC099579|Izumo3|69314|IZUMO family member 3	NM_027034|Izumo3|69314|IZUMO family member 3	AK005867|Izumo3|69314|IZUMO family member 3
mm9_v1_chr4_-_128639595_128639690	17.8914	RFX1..5_RFXANK_RFXAP.p2	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr4_+_33069972_33070146	17.6899	RFX1..5_RFXANK_RFXAP.p2	NM_027491|Rragd|52187|Ras-related GTP binding D	AF490406|Rragd|52187|Ras-related GTP binding D
mm9_v1_chr8_+_98057984_98058038	17.6689	RFX1..5_RFXANK_RFXAP.p2	AK077130|Ccdc113|244608|coiled-coil domain containing 113	NM_172914|Ccdc113|244608|coiled-coil domain containing 113	BC060957|Ccdc113|244608|coiled-coil domain containing 113	BC048506|Ccdc113|244608|coiled-coil domain containing 113
mm9_v1_chr2_+_136357921_136358056	17.6624	RFX1..5_RFXANK_RFXAP.p2	AK029804|Ankrd5|319196|ankyrin repeat domain 5	BC089504|Ankrd5|319196|ankyrin repeat domain 5	BC120825|Ankrd5|319196|ankyrin repeat domain 5	BC144833|Ankrd5|319196|ankyrin repeat domain 5	NM_175667|Ankrd5|319196|ankyrin repeat domain 5
mm9_v1_chr7_-_89796961_89797037	17.6539	RFX1..5_RFXANK_RFXAP.p2	AK007285|Fam154b|330577|family with sequence similarity 154, member B	AK007315|Fam154b|330577|family with sequence similarity 154, member B	AK051095|Fam154b|330577|family with sequence similarity 154, member B	AK038727|Fam154b|330577|family with sequence similarity 154, member B	NM_177894|Fam154b|330577|family with sequence similarity 154, member B
mm9_v1_chr15_+_79059802_79059887	17.4737	RFX1..5_RFXANK_RFXAP.p2	NM_001045558|Pick1|18693|protein interacting with C kinase 1	AK090155|Pick1|18693|protein interacting with C kinase 1	AK050224|Pick1|18693|protein interacting with C kinase 1	BC023088|Pick1|18693|protein interacting with C kinase 1	BC048788|Pick1|18693|protein interacting with C kinase 1	AK162724|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chr4_-_141346551_141346594	17.4716	RFX1..5_RFXANK_RFXAP.p2	AK051048|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	NM_172338|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK028692|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK164023|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK154946|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16
mm9_v1_chr8_-_97666364_97666472	17.441	RFX1..5_RFXANK_RFXAP.p2	AK166482|Kifc3|16582|kinesin family member C3	BC070429|Kifc3|16582|kinesin family member C3	NM_001145831|Kifc3|16582|kinesin family member C3	NM_010631|Kifc3|16582|kinesin family member C3	D49546|Kifc3|16582|kinesin family member C3
mm9_v1_chr15_+_81494399_81494424	17.3352	RFX1..5_RFXANK_RFXAP.p2	BC023933|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	BC030864|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK141810|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr1_+_166237784_166237874	17.331	RFX1..5_RFXANK_RFXAP.p2	AK144915|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_138314|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_178071|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK043515|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK085222|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK164652|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK044962|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC038021|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC049225|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr5_+_27588579_27588623	17.3294	RFX1..5_RFXANK_RFXAP.p2	BC048383|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr15_+_81494375_81494386	17.2974	RFX1..5_RFXANK_RFXAP.p2	AK145560|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237000|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237001|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237002|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr9_-_121748578_121748578	17.2757	RFX1..5_RFXANK_RFXAP.p2	NM_028384|Ccdc13|434446|coiled-coil domain containing 13
mm9_v1_chr7_+_140968543_140968573	17.2446	RFX1..5_RFXANK_RFXAP.p2	AY819025|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	AK017071|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	AK005694|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	BC046278|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	NM_025850|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1
mm9_v1_chr7_+_19576593_19576667	17.227	RFX1..5_RFXANK_RFXAP.p2	NM_145579|Mypop|232934|Myb-related transcription factor, partner of profilin	M82902|Mypop|232934|Myb-related transcription factor, partner of profilin	AF364868|Mypop|232934|Myb-related transcription factor, partner of profilin
mm9_v1_chr12_+_85750017_85750095	17.205	RFX1..5_RFXANK_RFXAP.p2	AK013494|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	NM_028377|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	AK133381|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151099|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151103|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene
mm9_v1_chr4_+_133658497_133658531	17.1364	RFX1..5_RFXANK_RFXAP.p2	AK048494|Ubxn11|67586|UBX domain protein 11	NM_026257|Ubxn11|67586|UBX domain protein 11	AK015720|Ubxn11|67586|UBX domain protein 11	BC019461|Ubxn11|67586|UBX domain protein 11
mm9_v1_chr11_-_5965743_5965763	17.1268	RFX1..5_RFXANK_RFXAP.p2	AK046454|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_001174053|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_001174054|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_007595|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chrX_-_130432840_130432967	17.0946	RFX1..5_RFXANK_RFXAP.p2	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr11_+_101329615_101329668	17.0621	RFX1..5_RFXANK_RFXAP.p2	BC107022|Rnd2|11858|Rho family GTPase 2	NM_009708|Rnd2|11858|Rho family GTPase 2	BC128475|Rnd2|11858|Rho family GTPase 2	BC127034|Rnd2|11858|Rho family GTPase 2	AF016482|Rnd2|11858|Rho family GTPase 2
mm9_v1_chr10_-_62041134_62041209	17.0055	RFX1..5_RFXANK_RFXAP.p2	AK149629|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK003009|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK158730|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	BC055307|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	BC090974|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	BC046485|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK161007|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK129320|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK035659|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	AK141324|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene	NM_028197|2510003E04Rik|72320|RIKEN cDNA 2510003E04 gene
mm9_v1_chr7_+_133991066_133991211	16.9163	RFX1..5_RFXANK_RFXAP.p2	BC055768|Doc2a|13446|double C2, alpha	NM_010069|Doc2a|13446|double C2, alpha
mm9_v1_chr15_-_98593432_98593456	16.8638	RFX1..5_RFXANK_RFXAP.p2	AK195626|Arf3|11842|ADP-ribosylation factor 3
mm9_v1_chr5_+_66651256_66651363	16.8277	RFX1..5_RFXANK_RFXAP.p2	AK163500|Nsun7|70918|NOL1/NOP2/Sun domain family, member 7	AK035181|Nsun7|70918|NOL1/NOP2/Sun domain family, member 7	NM_027602|Nsun7|70918|NOL1/NOP2/Sun domain family, member 7
mm9_v1_chr9_+_108998083_108998108	16.7958	RFX1..5_RFXANK_RFXAP.p2	AB072381|Plxnb1|235611|plexin B1
mm9_v1_chr9_-_72833159_72833188	16.7558	RFX1..5_RFXANK_RFXAP.p2	BC099568|Gm5918|546143|predicted gene 5918	BC048630|Gm5918|546143|predicted gene 5918	NM_001198789|Gm5918|546143|predicted gene 5918	AK145722|Gm5918|546143|predicted gene 5918
mm9_v1_chr2_+_119798434_119798434	16.5468	RFX1..5_RFXANK_RFXAP.p2	BC070449|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1	NM_011941|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1
mm9_v1_chr7_-_134732108_134732108	16.5122	RFX1..5_RFXANK_RFXAP.p2	AK140121|Gm166|233899|predicted gene 166	NM_001033040|Gm166|233899|predicted gene 166
mm9_v1_chr5_+_31014229_31014273	16.4822	RFX1..5_RFXANK_RFXAP.p2	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr12_+_114424066_114424140	16.4787	RFX1..5_RFXANK_RFXAP.p2	NM_153776|Tmem121|69195|transmembrane protein 121	AK010454|Tmem121|69195|transmembrane protein 121	AF488729|Tmem121|69195|transmembrane protein 121
mm9_v1_chrX_-_7709907_7709983	16.4735	RFX1..5_RFXANK_RFXAP.p2	BC080853|Wdr13|73447|WD repeat domain 13	BC057366|Wdr13|73447|WD repeat domain 13	NM_026137|Wdr13|73447|WD repeat domain 13
mm9_v1_chr7_+_132512374_132512374	16.4498	RFX1..5_RFXANK_RFXAP.p2	NM_001145759|4930571K23Rik|75861|RIKEN cDNA 4930571K23 gene
mm9_v1_chr10_-_79049826_79049880	16.4365	RFX1..5_RFXANK_RFXAP.p2	BC061243|Theg|21830|testicular haploid expressed gene	AB033128|Theg|21830|testicular haploid expressed gene	AK017058|Theg|21830|testicular haploid expressed gene	BC050970|Theg|21830|testicular haploid expressed gene	NM_011583|Theg|21830|testicular haploid expressed gene	NM_199226|Theg|21830|testicular haploid expressed gene
mm9_v1_chr12_+_73637330_73637353	16.3522	RFX1..5_RFXANK_RFXAP.p2	AK076035|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene	NM_026327|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene
mm9_v1_chr15_+_81494364_81494367	16.3207	RFX1..5_RFXANK_RFXAP.p2	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr15_+_81494368_81494374	16.2968	RFX1..5_RFXANK_RFXAP.p2	AK029115|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr5_-_141178229_141178331	16.2736	RFX1..5_RFXANK_RFXAP.p2	AK029333|Iqce|74239|IQ motif containing E	BC059223|Iqce|74239|IQ motif containing E	NM_028833|Iqce|74239|IQ motif containing E
mm9_v1_chr7_+_58877199_58877199	16.2668	RFX1..5_RFXANK_RFXAP.p2	NM_080853|Slc17a6|140919|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm9_v1_chr11_+_59652991_59653017	16.2351	RFX1..5_RFXANK_RFXAP.p2	AK008226|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr1_+_154597680_154597706	16.2016	RFX1..5_RFXANK_RFXAP.p2	BC100465|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)	NM_001081197|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)	AK017014|Apobec4|71281|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
mm9_v1_chr1_-_174259356_174259436	16.196	RFX1..5_RFXANK_RFXAP.p2	AF130860|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK033970|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	NM_008429|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	U11860|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK046084|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK015907|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9
mm9_v1_chr11_+_3795221_3795283	16.0925	RFX1..5_RFXANK_RFXAP.p2	NM_173745|Dusp18|75219|dual specificity phosphatase 18	AK079664|Dusp18|75219|dual specificity phosphatase 18	BC020036|Dusp18|75219|dual specificity phosphatase 18	AK015917|Dusp18|75219|dual specificity phosphatase 18	AK081916|Dusp18|75219|dual specificity phosphatase 18
mm9_v1_chr4_-_138281162_138281179	16.0451	RFX1..5_RFXANK_RFXAP.p2	AK133185|Ubxn10|212190|UBX domain protein 10	AK161245|Ubxn10|212190|UBX domain protein 10	NM_178671|Ubxn10|212190|UBX domain protein 10	AK077656|Ubxn10|212190|UBX domain protein 10
mm9_v1_chr7_-_116637251_116637251	15.9421	RFX1..5_RFXANK_RFXAP.p2	AK147559|Trim66|330627|tripartite motif-containing 66	NM_001170913|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr3_-_126701320_126701358	15.9181	RFX1..5_RFXANK_RFXAP.p2	BC059251|Ank2|109676|ankyrin 2, brain	AK082352|Ank2|109676|ankyrin 2, brain
mm9_v1_chr9_-_14575435_14575473	15.9009	RFX1..5_RFXANK_RFXAP.p2	BC092535|1700012B09Rik|69325|RIKEN cDNA 1700012B09 gene	AK005890|1700012B09Rik|69325|RIKEN cDNA 1700012B09 gene	AK005747|1700012B09Rik|69325|RIKEN cDNA 1700012B09 gene	NM_029306|1700012B09Rik|69325|RIKEN cDNA 1700012B09 gene
mm9_v1_chr16_-_38341897_38341905	15.8551	RFX1..5_RFXANK_RFXAP.p2	AK045121|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr8_+_38056628_38056675	15.7442	RFX1..5_RFXANK_RFXAP.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chr7_-_29999001_29999053	15.7021	RFX1..5_RFXANK_RFXAP.p2	AK133307|Catsperg1|320225|cation channel, sperm-associated, gamma 1	NM_001164658|Catsperg1|320225|cation channel, sperm-associated, gamma 1	AK039202|Catsperg1|320225|cation channel, sperm-associated, gamma 1
mm9_v1_chr17_+_56749361_56749367	15.7007	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr9_-_69989168_69989278	15.6248	RFX1..5_RFXANK_RFXAP.p2	AK046408|Fam81a|76886|family with sequence similarity 81, member A
mm9_v1_chr14_-_21271443_21271446	15.5683	RFX1..5_RFXANK_RFXAP.p2	AK029536|Ttc18|76670|tetratricopeptide repeat domain 18	BC138269|Ttc18|76670|tetratricopeptide repeat domain 18	BC145225|Ttc18|76670|tetratricopeptide repeat domain 18	BC145226|Ttc18|76670|tetratricopeptide repeat domain 18	NM_001163638|Ttc18|76670|tetratricopeptide repeat domain 18	NM_001163639|Ttc18|76670|tetratricopeptide repeat domain 18	NM_029698|Ttc18|76670|tetratricopeptide repeat domain 18
mm9_v1_chr11_-_74710462_74710503	15.5166	RFX1..5_RFXANK_RFXAP.p2	AK122273|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr16_-_16829386_16829548	15.4565	RFX1..5_RFXANK_RFXAP.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr4_-_124742875_124742900	15.4383	RFX1..5_RFXANK_RFXAP.p2	BC118619|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	BC122552|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	AK077109|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	NM_175223|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1
mm9_v1_chr11_+_101329457_101329578	15.4295	RFX1..5_RFXANK_RFXAP.p2	BC139330|Rnd2|11858|Rho family GTPase 2	BC139331|Rnd2|11858|Rho family GTPase 2
mm9_v1_chr3_+_108394195_108394337	15.426	RFX1..5_RFXANK_RFXAP.p2	NM_181400|Wdr47|99512|WD repeat domain 47	AK047357|Wdr47|99512|WD repeat domain 47	AK163422|Wdr47|99512|WD repeat domain 47	BC040337|Wdr47|99512|WD repeat domain 47
mm9_v1_chr16_-_90934985_90935126	15.4167	RFX1..5_RFXANK_RFXAP.p2	AK003413|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	BC019533|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	AK018510|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	AK045905|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	NM_026502|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene
mm9_v1_chr15_+_81494352_81494363	15.4005	RFX1..5_RFXANK_RFXAP.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr11_-_105318037_105318048	15.3236	RFX1..5_RFXANK_RFXAP.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr7_-_52184801_52184822	15.3008	RFX1..5_RFXANK_RFXAP.p2	BC031433|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr11_-_118203813_118203855	15.2699	RFX1..5_RFXANK_RFXAP.p2	Y09878|BC100451|58251|cDNA sequence BC100451	BC100451|BC100451|58251|cDNA sequence BC100451	NM_021440|BC100451|58251|cDNA sequence BC100451	AK132657|BC100451|58251|cDNA sequence BC100451
mm9_v1_chr17_-_15080040_15080162	15.2505	RFX1..5_RFXANK_RFXAP.p2	AK004434|1190001L17Rik|68923|RIKEN cDNA 1190001L17 gene	AK077050|Wdr27|71682|WD repeat domain 27	NM_175173|Wdr27|71682|WD repeat domain 27	AK084217|Wdr27|71682|WD repeat domain 27	AK002615|Wdr27|71682|WD repeat domain 27
mm9_v1_chr11_-_67779142_67779152	15.2442	RFX1..5_RFXANK_RFXAP.p2	BC118541|Wdr16|71860|WD repeat domain 16	AK006118|Wdr16|71860|WD repeat domain 16	NM_027963|Wdr16|71860|WD repeat domain 16	AK016839|Wdr16|71860|WD repeat domain 16
mm9_v1_chr18_-_39078304_39078358	15.1621	RFX1..5_RFXANK_RFXAP.p2	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr17_+_85489991_85490039	15.1096	RFX1..5_RFXANK_RFXAP.p2	AK155246|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene	NM_028576|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chr7_-_4636519_4636597	15.0909	RFX1..5_RFXANK_RFXAP.p2	AK088469|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	AK013263|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	BC014758|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	NM_024172|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm9_v1_chrX_-_49034548_49034559	15.0849	RFX1..5_RFXANK_RFXAP.p2	BC047151|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK052348|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr9_-_59201234_59201314	15.0563	RFX1..5_RFXANK_RFXAP.p2	BC055797|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	BC089507|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	AK141430|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	BC092531|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	AK039560|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	AK089970|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	AK134734|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	BC145771|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	BC145773|Bbs4|102774|Bardet-Biedl syndrome 4 (human)	NM_175325|Bbs4|102774|Bardet-Biedl syndrome 4 (human)
mm9_v1_chr5_-_141178143_141178224	15.0254	RFX1..5_RFXANK_RFXAP.p2	AK006472|Iqce|74239|IQ motif containing E	BC065128|Iqce|74239|IQ motif containing E
mm9_v1_chr18_+_61085303_61085326	15.0167	RFX1..5_RFXANK_RFXAP.p2	BC031745|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr6_+_55153376_55153497	14.969	RFX1..5_RFXANK_RFXAP.p2	AK082855|Fam188b|330323|family with sequence similarity 188, member B	NM_001142781|Fam188b|330323|family with sequence similarity 188, member B	NM_177883|Fam188b|330323|family with sequence similarity 188, member B	BC118939|Fam188b|330323|family with sequence similarity 188, member B	BC118940|Fam188b|330323|family with sequence similarity 188, member B	AK142385|Fam188b|330323|family with sequence similarity 188, member B	AK161304|Fam188b|330323|family with sequence similarity 188, member B
mm9_v1_chr9_-_67407509_67407509	14.9538	RFX1..5_RFXANK_RFXAP.p2	NM_001081242|Tln2|70549|talin 2
mm9_v1_chr6_+_126803115_126803190	14.8913	RFX1..5_RFXANK_RFXAP.p2	NM_009650|Akap3|11642|A kinase (PRKA) anchor protein 3	BC100458|Akap3|11642|A kinase (PRKA) anchor protein 3	AF093406|Akap3|11642|A kinase (PRKA) anchor protein 3
mm9_v1_chr10_+_83185609_83185706	14.8342	RFX1..5_RFXANK_RFXAP.p2	BC048550|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	NM_001145198|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	AK012407|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	AK005183|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene
mm9_v1_chr11_+_68884268_68884388	14.7414	RFX1..5_RFXANK_RFXAP.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chr4_-_117545030_117545074	14.6449	RFX1..5_RFXANK_RFXAP.p2	AK133118|Ccdc24|381546|coiled-coil domain containing 24	NM_001034876|Ccdc24|381546|coiled-coil domain containing 24
mm9_v1_chr8_+_108351630_108351673	14.6228	RFX1..5_RFXANK_RFXAP.p2	BC100431|Tsnaxip1|72236|translin-associated factor X (Tsnax) interacting protein 1	AK006041|Tsnaxip1|72236|translin-associated factor X (Tsnax) interacting protein 1	NM_024445|Tsnaxip1|72236|translin-associated factor X (Tsnax) interacting protein 1	AF343750|Tsnaxip1|72236|translin-associated factor X (Tsnax) interacting protein 1
mm9_v1_chr4_+_45903174_45903208	14.6182	RFX1..5_RFXANK_RFXAP.p2	NM_198660|E230008N13Rik|381522|RIKEN cDNA E230008N13 gene
mm9_v1_chr2_-_83781362_83781384	14.5695	RFX1..5_RFXANK_RFXAP.p2	BC120837|Zswim2|71861|zinc finger, SWIM domain containing 2	BC144860|Zswim2|71861|zinc finger, SWIM domain containing 2	AK006367|Zswim2|71861|zinc finger, SWIM domain containing 2	NM_027964|Zswim2|71861|zinc finger, SWIM domain containing 2	AK017097|Zswim2|71861|zinc finger, SWIM domain containing 2
mm9_v1_chr17_+_79336458_79336518	14.5548	RFX1..5_RFXANK_RFXAP.p2	NM_028611|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	AK010752|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	AK090097|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	BC108350|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene
mm9_v1_chr2_+_164648185_164648185	14.4626	RFX1..5_RFXANK_RFXAP.p2	BC046831|Zswim1|71971|zinc finger, SWIM domain containing 1	NM_028028|Zswim1|71971|zinc finger, SWIM domain containing 1
mm9_v1_chr15_-_83341285_83341349	14.4311	RFX1..5_RFXANK_RFXAP.p2	BC010510|Ttll1|319953|tubulin tyrosine ligase-like 1	AK084005|Ttll1|319953|tubulin tyrosine ligase-like 1	AK140472|Ttll1|319953|tubulin tyrosine ligase-like 1	AK031917|Ttll1|319953|tubulin tyrosine ligase-like 1	AK168786|Ttll1|319953|tubulin tyrosine ligase-like 1	AK047046|Ttll1|319953|tubulin tyrosine ligase-like 1	AK169150|Ttll1|319953|tubulin tyrosine ligase-like 1	NM_178869|Ttll1|319953|tubulin tyrosine ligase-like 1
mm9_v1_chr2_+_152788220_152788276	14.4251	RFX1..5_RFXANK_RFXAP.p2	AK006027|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_001083618|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	NM_029064|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015388|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AK015740|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC130024|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	BC148285|Ttll9|74711|tubulin tyrosine ligase-like family, member 9	AM690753|Ttll9|74711|tubulin tyrosine ligase-like family, member 9
mm9_v1_chr11_-_74710562_74710581	14.2701	RFX1..5_RFXANK_RFXAP.p2	BC058414|Sgsm2|97761|small G protein signaling modulator 2	BC060163|Sgsm2|97761|small G protein signaling modulator 2	NM_197943|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr3_-_116210955_116211092	14.2071	RFX1..5_RFXANK_RFXAP.p2	AK167830|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK151108|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK151400|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK159961|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK002543|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	BC016519|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK009245|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	BC090403|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	AK152129|Rtcd1|66368|RNA terminal phosphate cyclase domain 1	NM_025517|Rtcd1|66368|RNA terminal phosphate cyclase domain 1
mm9_v1_chrX_+_50626600_50626621	14.0444	RFX1..5_RFXANK_RFXAP.p2	AK015916|Fam122c|73866|family with sequence similarity 122, member C	AK015288|Fam122c|73866|family with sequence similarity 122, member C	NM_028671|Fam122c|73866|family with sequence similarity 122, member C	BC147640|Fam122c|73866|family with sequence similarity 122, member C	BC147646|Fam122c|73866|family with sequence similarity 122, member C	BC172114|Fam122c|73866|family with sequence similarity 122, member C
mm9_v1_chr2_-_32639915_32639924	13.9909	RFX1..5_RFXANK_RFXAP.p2	BC118617|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	BC121825|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	NM_025619|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr16_+_36221553_36221647	13.8821	RFX1..5_RFXANK_RFXAP.p2	AK008122|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC125396|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC125422|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC145264|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	NM_029733|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene
mm9_v1_chr6_-_119280616_119280791	13.8727	RFX1..5_RFXANK_RFXAP.p2	AK039006|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	AK045494|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	BC058944|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	NM_172492|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2
mm9_v1_chr11_-_120794140_120794186	13.8431	RFX1..5_RFXANK_RFXAP.p2	AK220306|Ccdc57|71276|coiled-coil domain containing 57	BC056480|Ccdc57|71276|coiled-coil domain containing 57	NM_027745|Ccdc57|71276|coiled-coil domain containing 57
mm9_v1_chr10_+_62442975_62442986	13.7611	RFX1..5_RFXANK_RFXAP.p2	AK083205|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chrX_-_70388714_70388762	13.6815	RFX1..5_RFXANK_RFXAP.p2	BC094343|Gm14685|574404|predicted gene 14685	NM_001025383|Gm14685|574404|predicted gene 14685
mm9_v1_chr7_-_148068161_148068207	13.6461	RFX1..5_RFXANK_RFXAP.p2	AF299338|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	NM_022433|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)
mm9_v1_chr11_+_101286385_101286400	13.6068	RFX1..5_RFXANK_RFXAP.p2	AK086362|Rundc1|217201|RUN domain containing 1	BC119592|Rundc1|217201|RUN domain containing 1	BC119593|Rundc1|217201|RUN domain containing 1	NM_172566|Rundc1|217201|RUN domain containing 1
mm9_v1_chr15_+_75534706_75534718	13.5577	RFX1..5_RFXANK_RFXAP.p2	NM_001163465|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	NM_008164|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1
mm9_v1_chr8_+_122099134_122099215	13.5248	RFX1..5_RFXANK_RFXAP.p2	AK019633|Lrrc50|68270|leucine rich repeat containing 50	NM_026648|Lrrc50|68270|leucine rich repeat containing 50	BC050751|Lrrc50|68270|leucine rich repeat containing 50
mm9_v1_chr2_-_129627180_129627194	13.5143	RFX1..5_RFXANK_RFXAP.p2	AB041802|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK016906|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK030036|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene
mm9_v1_chr8_-_41393270_41393282	13.4896	RFX1..5_RFXANK_RFXAP.p2	AK005145|1500004F05Rik|69765|RIKEN cDNA 1500004F05 gene
mm9_v1_chr15_-_78893275_78893359	13.4793	RFX1..5_RFXANK_RFXAP.p2	BC014743|Ankrd54|223690|ankyrin repeat domain 54	NM_144849|Ankrd54|223690|ankyrin repeat domain 54	DQ884878|Ankrd54|223690|ankyrin repeat domain 54	AK133785|Ankrd54|223690|ankyrin repeat domain 54	AK050440|Ankrd54|223690|ankyrin repeat domain 54	AK143625|Ankrd54|223690|ankyrin repeat domain 54	AK084500|Ankrd54|223690|ankyrin repeat domain 54
mm9_v1_chr14_-_70553471_70553549	13.4593	RFX1..5_RFXANK_RFXAP.p2	AK028194|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	BC038346|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene
mm9_v1_chr9_-_69989285_69989363	13.4448	RFX1..5_RFXANK_RFXAP.p2	AK038532|Fam81a|76886|family with sequence similarity 81, member A	AK079541|Fam81a|76886|family with sequence similarity 81, member A	AK018282|Fam81a|76886|family with sequence similarity 81, member A	AK044090|Fam81a|76886|family with sequence similarity 81, member A	NM_029784|Fam81a|76886|family with sequence similarity 81, member A
mm9_v1_chr9_+_107449628_107449790	13.4423	RFX1..5_RFXANK_RFXAP.p2	AK132332|Zmynd10|114602|zinc finger, MYND domain containing 10	BC052357|Zmynd10|114602|zinc finger, MYND domain containing 10	NM_053253|Zmynd10|114602|zinc finger, MYND domain containing 10	AF123386|Zmynd10|114602|zinc finger, MYND domain containing 10
mm9_v1_chr9_+_72806591_72806665	13.4422	RFX1..5_RFXANK_RFXAP.p2	AY428507|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AY464142|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	NM_001163725|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	NM_026314|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AK076862|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AK161368|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	BC026462|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)
mm9_v1_chr17_-_37088436_37088450	13.3796	RFX1..5_RFXANK_RFXAP.p2	EF528576|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr2_-_75776467_75776587	13.3474	RFX1..5_RFXANK_RFXAP.p2	AK147134|Ttc30b|72421|tetratricopeptide repeat domain 30B	AK011097|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151060|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151184|Ttc30b|72421|tetratricopeptide repeat domain 30B	NM_028235|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC157929|Ttc30b|72421|tetratricopeptide repeat domain 30B
mm9_v1_chr19_-_4283047_4283120	13.3071	RFX1..5_RFXANK_RFXAP.p2	BC058982|Ankrd13d|68423|ankyrin repeat domain 13 family, member D
mm9_v1_chr8_+_97190470_97190586	13.2805	RFX1..5_RFXANK_RFXAP.p2	AK150513|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK155242|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	BC024708|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chrX_+_70368406_70368454	13.2219	RFX1..5_RFXANK_RFXAP.p2	NM_001025383|Gm14685|574404|predicted gene 14685	BC094343|Gm14685|574404|predicted gene 14685
mm9_v1_chr1_+_88051331_88051402	13.2212	RFX1..5_RFXANK_RFXAP.p2	AK164041|Armc9|78795|armadillo repeat containing 9	NM_030184|Armc9|78795|armadillo repeat containing 9	AK030307|Armc9|78795|armadillo repeat containing 9	AK140598|Armc9|78795|armadillo repeat containing 9	AK019512|Armc9|78795|armadillo repeat containing 9	AK019600|Armc9|78795|armadillo repeat containing 9	AK046693|Armc9|78795|armadillo repeat containing 9	AK048064|Armc9|78795|armadillo repeat containing 9	AK039800|Armc9|78795|armadillo repeat containing 9	AK014450|Armc9|78795|armadillo repeat containing 9	AK036083|Armc9|78795|armadillo repeat containing 9	AK161393|Armc9|78795|armadillo repeat containing 9	AK017564|Armc9|78795|armadillo repeat containing 9	NM_027456|Armc9|78795|armadillo repeat containing 9	AK045699|Armc9|78795|armadillo repeat containing 9	BC043101|Armc9|78795|armadillo repeat containing 9
mm9_v1_chr16_-_38341927_38341945	13.2119	RFX1..5_RFXANK_RFXAP.p2	AK077038|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene	NM_001081025|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr15_-_98593505_98593647	13.0901	RFX1..5_RFXANK_RFXAP.p2	D87900|Arf3|11842|ADP-ribosylation factor 3	BC014778|Arf3|11842|ADP-ribosylation factor 3	NM_007478|Arf3|11842|ADP-ribosylation factor 3	AK171354|Arf3|11842|ADP-ribosylation factor 3	BC024935|Arf3|11842|ADP-ribosylation factor 3	AK154948|Arf3|11842|ADP-ribosylation factor 3	AK165176|Arf3|11842|ADP-ribosylation factor 3	AK151296|Arf3|11842|ADP-ribosylation factor 3
mm9_v1_chr12_+_73637359_73637399	13.0752	RFX1..5_RFXANK_RFXAP.p2	AK007829|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene	AK136802|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene	AK029996|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene
mm9_v1_chr3_+_154756499_154756551	13.0539	RFX1..5_RFXANK_RFXAP.p2	AK015333|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	AK016634|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	BC112424|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	BC113130|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	AK015758|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3
mm9_v1_chr7_-_51630399_51630399	13.0367	RFX1..5_RFXANK_RFXAP.p2	AK005784|1700008O03Rik|69349|RIKEN cDNA 1700008O03 gene	NM_027049|1700008O03Rik|69349|RIKEN cDNA 1700008O03 gene
mm9_v1_chr2_-_32639934_32639947	13.0194	RFX1..5_RFXANK_RFXAP.p2	AK006127|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr2_-_28555168_28555202	12.9765	RFX1..5_RFXANK_RFXAP.p2	AK161340|1700026L06Rik|69987|RIKEN cDNA 1700026L06 gene	AK155408|1700026L06Rik|69987|RIKEN cDNA 1700026L06 gene	BC055108|1700026L06Rik|69987|RIKEN cDNA 1700026L06 gene	NM_027283|1700026L06Rik|69987|RIKEN cDNA 1700026L06 gene	AK155297|1700026L06Rik|69987|RIKEN cDNA 1700026L06 gene
mm9_v1_chr15_+_75534737_75534823	12.9757	RFX1..5_RFXANK_RFXAP.p2	AK143132|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	BC004843|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	BC052010|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	AK220431|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	U43194|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1
mm9_v1_chr9_-_42280256_42280323	12.9263	RFX1..5_RFXANK_RFXAP.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr9_+_108472210_108472254	12.9257	RFX1..5_RFXANK_RFXAP.p2	AK149963|Dalrd3|67789|DALR anticodon binding domain containing 3	NM_026378|Dalrd3|67789|DALR anticodon binding domain containing 3	AK002439|Dalrd3|67789|DALR anticodon binding domain containing 3	AK171818|Dalrd3|67789|DALR anticodon binding domain containing 3	AK169405|Dalrd3|67789|DALR anticodon binding domain containing 3	BC013483|Dalrd3|67789|DALR anticodon binding domain containing 3
mm9_v1_chr3_-_68808386_68808491	12.8893	RFX1..5_RFXANK_RFXAP.p2	BC034101|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK042231|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK129339|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK147305|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	NM_026641|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)
mm9_v1_chr4_+_135051891_135051982	12.8846	RFX1..5_RFXANK_RFXAP.p2	AK015061|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	AK019766|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	NM_030189|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	BC145657|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene
mm9_v1_chr4_+_99496130_99496190	12.846	RFX1..5_RFXANK_RFXAP.p2	BC112327|Efcab7|230500|EF-hand calcium binding domain 7	AK143777|Efcab7|230500|EF-hand calcium binding domain 7	BC020077|Efcab7|230500|EF-hand calcium binding domain 7	NM_145549|Efcab7|230500|EF-hand calcium binding domain 7
mm9_v1_chr6_-_115788429_115788481	12.7464	RFX1..5_RFXANK_RFXAP.p2	BC060267|BC060267|212516|cDNA sequence BC060267	NM_001110506|BC060267|212516|cDNA sequence BC060267
mm9_v1_chr14_+_77556569_77556616	12.6832	RFX1..5_RFXANK_RFXAP.p2	AK082388|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1	AK078337|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1	AK162001|Enox1|239188|ecto-NOX disulfide-thiol exchanger 1
mm9_v1_chr17_+_9181197_9181252	12.643	RFX1..5_RFXANK_RFXAP.p2	NM_025851|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK161278|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK005830|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC050753|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK006307|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK015220|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC061078|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene
mm9_v1_chr17_+_80615253_80615253	12.6384	RFX1..5_RFXANK_RFXAP.p2	BC118946|Ttc39d|67737|tetratricopeptide repeat domain 39D	BC118947|Ttc39d|67737|tetratricopeptide repeat domain 39D	NM_026351|Ttc39d|67737|tetratricopeptide repeat domain 39D
mm9_v1_chr9_+_108686107_108686181	12.6152	RFX1..5_RFXANK_RFXAP.p2	AK005166|Ip6k2|76500|inositol hexaphosphate kinase 2	AK050593|Ip6k2|76500|inositol hexaphosphate kinase 2	AK057615|Ip6k2|76500|inositol hexaphosphate kinase 2
mm9_v1_chr12_+_81619976_81620155	12.5373	RFX1..5_RFXANK_RFXAP.p2	NM_001081421|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB045325|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK138883|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB175683|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
mm9_v1_chr10_-_55948481_55948530	12.524	RFX1..5_RFXANK_RFXAP.p2	NM_001033385|D630037F22Rik|544696|RIKEN cDNA D630037F22 gene
mm9_v1_chr7_-_52184789_52184800	12.5189	RFX1..5_RFXANK_RFXAP.p2	AK155515|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr5_-_92471603_92471743	12.5174	RFX1..5_RFXANK_RFXAP.p2	AK145688|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK139820|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK030598|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029067|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr4_+_111392628_111392648	12.4971	RFX1..5_RFXANK_RFXAP.p2	AK132771|Spata6|67946|spermatogenesis associated 6	AK053170|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr4_-_12099125_12099161	12.4547	RFX1..5_RFXANK_RFXAP.p2	AK032690|Fam92a|68099|family with sequence similarity 92, member A	AK078438|Fam92a|68099|family with sequence similarity 92, member A	AK088705|Fam92a|68099|family with sequence similarity 92, member A	NM_026558|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr19_-_4283126_4283138	12.4476	RFX1..5_RFXANK_RFXAP.p2	AK089186|Ankrd13d|68423|ankyrin repeat domain 13 family, member D	AK155698|Ankrd13d|68423|ankyrin repeat domain 13 family, member D	NM_026720|Ankrd13d|68423|ankyrin repeat domain 13 family, member D
mm9_v1_chr11_+_98724908_98724950	12.4271	RFX1..5_RFXANK_RFXAP.p2	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr8_+_112790866_112790890	12.3373	RFX1..5_RFXANK_RFXAP.p2	AK043971|Hydin|244653|hydrocephalus inducing	AY173049|Hydin|244653|hydrocephalus inducing	NM_172916|Hydin|244653|hydrocephalus inducing	AK142981|Hydin|244653|hydrocephalus inducing
mm9_v1_chr2_-_30033944_30034014	12.2784	RFX1..5_RFXANK_RFXAP.p2	AK044983|D2Wsu81e|227695|DNA segment, Chr 2, Wayne State University 81, expressed	AK036945|D2Wsu81e|227695|DNA segment, Chr 2, Wayne State University 81, expressed	AK147162|D2Wsu81e|227695|DNA segment, Chr 2, Wayne State University 81, expressed	AK046148|D2Wsu81e|227695|DNA segment, Chr 2, Wayne State University 81, expressed	NM_172660|D2Wsu81e|227695|DNA segment, Chr 2, Wayne State University 81, expressed
mm9_v1_chr4_+_138281239_138281239	12.2735	RFX1..5_RFXANK_RFXAP.p2	NM_008868|Pla2g2c|18781|phospholipase A2, group IIC
mm9_v1_chr7_-_13639862_13640112	12.2343	RFX1..5_RFXANK_RFXAP.p2	BC129904|Mzf1|109889|myeloid zinc finger 1	BC129905|Mzf1|109889|myeloid zinc finger 1	AK145014|Mzf1|109889|myeloid zinc finger 1	AB088478|Mzf1|109889|myeloid zinc finger 1	BC060649|Mzf1|109889|myeloid zinc finger 1	AK030410|Mzf1|109889|myeloid zinc finger 1	NM_145819|Mzf1|109889|myeloid zinc finger 1
mm9_v1_chrX_-_71890973_71890973	12.2082	RFX1..5_RFXANK_RFXAP.p2	NM_001099302|Gm5640|434797|predicted gene 5640
mm9_v1_chr12_+_83270349_83270493	12.1732	RFX1..5_RFXANK_RFXAP.p2	AK147591|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	BC095958|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	AK078420|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr7_+_6683288_6683655	12.1547	RFX1..5_RFXANK_RFXAP.p2	AF229257|Usp29|57775|ubiquitin specific peptidase 29	AK142304|Usp29|57775|ubiquitin specific peptidase 29	AK084156|Usp29|57775|ubiquitin specific peptidase 29	AF227912|Usp29|57775|ubiquitin specific peptidase 29	AK038752|Usp29|57775|ubiquitin specific peptidase 29	NM_021323|Usp29|57775|ubiquitin specific peptidase 29
mm9_v1_chr12_+_104553168_104553168	12.1278	RFX1..5_RFXANK_RFXAP.p2	NM_001195726|Fam181a|544888|family with sequence similarity 181, member A
mm9_v1_chr9_-_24500725_24500736	12.0868	RFX1..5_RFXANK_RFXAP.p2	AK030128|Dpy19l2|320752|dpy-19-like 2 (C. elegans)	AK029497|Dpy19l2|320752|dpy-19-like 2 (C. elegans)	NM_001166207|Dpy19l2|320752|dpy-19-like 2 (C. elegans)
mm9_v1_chr17_+_36116868_36116882	12.0137	RFX1..5_RFXANK_RFXAP.p2	BC013243|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr17_+_28314346_28314398	12.007	RFX1..5_RFXANK_RFXAP.p2	AK028222|Zfp523|224656|zinc finger protein 523	NM_172617|Zfp523|224656|zinc finger protein 523	BC025615|Zfp523|224656|zinc finger protein 523
mm9_v1_chr9_+_59426108_59426143	12.0046	RFX1..5_RFXANK_RFXAP.p2	BC052406|Celf6|76183|CUGBP, Elav-like family member 6	NM_175235|Celf6|76183|CUGBP, Elav-like family member 6
mm9_v1_chr1_+_75233276_75233316	11.9757	RFX1..5_RFXANK_RFXAP.p2	NM_001159885|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr5_-_122822329_122822391	11.9515	RFX1..5_RFXANK_RFXAP.p2	BC019498|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK005211|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK150218|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr5_+_74042618_74042624	11.942	RFX1..5_RFXANK_RFXAP.p2	NM_178387|Spata18|73472|spermatogenesis associated 18	BC050799|Spata18|73472|spermatogenesis associated 18
mm9_v1_chr16_+_96457407_96457407	11.8978	RFX1..5_RFXANK_RFXAP.p2	BC047347|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	BC051669|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_001122993|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr17_-_56214328_56214451	11.8581	RFX1..5_RFXANK_RFXAP.p2	BC016412|Ubxn6|66530|UBX domain protein 6	AK148170|Ubxn6|66530|UBX domain protein 6	BC049963|Ubxn6|66530|UBX domain protein 6	NM_024432|Ubxn6|66530|UBX domain protein 6	AK008942|Ubxn6|66530|UBX domain protein 6	AF272895|Ubxn6|66530|UBX domain protein 6	AK161273|Ubxn6|66530|UBX domain protein 6	AK075705|Ubxn6|66530|UBX domain protein 6	AK082510|Ubxn6|66530|UBX domain protein 6
mm9_v1_chr7_+_148381017_148381054	11.78	RFX1..5_RFXANK_RFXAP.p2	NM_153777|Lrrc56|70552|leucine rich repeat containing 56	BC027807|Lrrc56|70552|leucine rich repeat containing 56
mm9_v1_chr1_+_75232981_75232997	11.7269	RFX1..5_RFXANK_RFXAP.p2	NM_001159883|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_001159884|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_020266|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_178055|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr9_-_63450254_63450297	11.7211	RFX1..5_RFXANK_RFXAP.p2	BC141047|Iqch|78250|IQ motif containing H	BC145231|Iqch|78250|IQ motif containing H	NM_030068|Iqch|78250|IQ motif containing H	AK019535|Iqch|78250|IQ motif containing H	AK029502|Iqch|78250|IQ motif containing H	AK029560|Iqch|78250|IQ motif containing H
mm9_v1_chr16_+_17646562_17646710	11.7201	RFX1..5_RFXANK_RFXAP.p2	NM_001166164|Ccdc74a|72315|coiled-coil domain containing 74A	AK009347|Ccdc74a|72315|coiled-coil domain containing 74A
mm9_v1_chr18_+_36508277_36508452	11.7125	RFX1..5_RFXANK_RFXAP.p2	NM_001081365|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	BC028765|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK167679|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK002512|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK028217|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK089711|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr1_+_75233130_75233146	11.668	RFX1..5_RFXANK_RFXAP.p2	AB028858|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr4_+_110070336_110070438	11.6678	RFX1..5_RFXANK_RFXAP.p2	AK016502|Agbl4|78933|ATP/GTP binding protein-like 4	AK019817|Agbl4|78933|ATP/GTP binding protein-like 4	AK051109|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867039|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867040|Agbl4|78933|ATP/GTP binding protein-like 4	NM_001048189|Agbl4|78933|ATP/GTP binding protein-like 4	NM_030231|Agbl4|78933|ATP/GTP binding protein-like 4
mm9_v1_chr6_+_30459848_30459899	11.6145	RFX1..5_RFXANK_RFXAP.p2	AK006038|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	NM_027073|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	BC049755|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr10_+_111497244_111497244	11.5916	RFX1..5_RFXANK_RFXAP.p2	AK005860|Glipr1l1|69286|GLI pathogenesis-related 1 like 1	NM_027018|Glipr1l1|69286|GLI pathogenesis-related 1 like 1
mm9_v1_chr19_-_60019520_60019556	11.4914	RFX1..5_RFXANK_RFXAP.p2	AK015534|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001164367|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr18_-_12464213_12464228	11.4769	RFX1..5_RFXANK_RFXAP.p2	NM_001190371|Ankrd29|225187|ankyrin repeat domain 29
mm9_v1_chr15_-_83895778_83895778	11.4359	RFX1..5_RFXANK_RFXAP.p2	BC065111|Efcab6|77627|EF-hand calcium binding domain 6	NM_029946|Efcab6|77627|EF-hand calcium binding domain 6
mm9_v1_chr9_-_50910070_50910182	11.3976	RFX1..5_RFXANK_RFXAP.p2	AK014780|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	AK132837|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	BC048587|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	NM_177702|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene
mm9_v1_chr11_+_84984593_84984597	11.3729	RFX1..5_RFXANK_RFXAP.p2	BC048674|1700125H20Rik|73634|RIKEN cDNA 1700125H20 gene	NM_028589|1700125H20Rik|73634|RIKEN cDNA 1700125H20 gene
mm9_v1_chr9_-_8042801_8042822	11.3674	RFX1..5_RFXANK_RFXAP.p2	BC115525|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	BC127165|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	BC133669|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	AK033793|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	NM_199017|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene
mm9_v1_chr7_-_52184840_52184904	11.3436	RFX1..5_RFXANK_RFXAP.p2	NM_001077264|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit	NM_007458|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr6_-_89545534_89545655	11.2859	RFX1..5_RFXANK_RFXAP.p2	AK144093|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK087642|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK005696|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	BC052929|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK167314|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK015314|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	BC011331|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK002980|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_001167736|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_025351|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6
mm9_v1_chr11_+_101286405_101286406	11.1849	RFX1..5_RFXANK_RFXAP.p2	AK157156|Rundc1|217201|RUN domain containing 1
mm9_v1_chr9_-_113935832_113935880	11.1448	RFX1..5_RFXANK_RFXAP.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr3_-_146432922_146432972	11.1319	RFX1..5_RFXANK_RFXAP.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr7_-_125849167_125849210	11.0482	RFX1..5_RFXANK_RFXAP.p2	AK186739|Gde1|56209|glycerophosphodiester phosphodiesterase 1	BC003902|Gde1|56209|glycerophosphodiester phosphodiesterase 1
mm9_v1_chr11_+_75813413_75813528	11.0314	RFX1..5_RFXANK_RFXAP.p2	NM_198637|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	BC049758|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK006044|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK132806|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene
mm9_v1_chrX_+_162608411_162608448	11.0291	RFX1..5_RFXANK_RFXAP.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chrX_-_56387565_56387612	10.9965	RFX1..5_RFXANK_RFXAP.p2	BC018238|Fgf13|14168|fibroblast growth factor 13	NM_010200|Fgf13|14168|fibroblast growth factor 13
mm9_v1_chr14_-_56254424_56254541	10.9884	RFX1..5_RFXANK_RFXAP.p2	AK202276|Ipo4|75751|importin 4	AF123388|Ipo4|75751|importin 4	AK018399|Ipo4|75751|importin 4	AK147086|Ipo4|75751|importin 4	AK142138|Ipo4|75751|importin 4	BC075690|Ipo4|75751|importin 4	AK171031|Ipo4|75751|importin 4	NM_024267|Ipo4|75751|importin 4	AK030490|Ipo4|75751|importin 4
mm9_v1_chr15_-_88808967_88808984	10.9787	RFX1..5_RFXANK_RFXAP.p2	AK030396|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	AK043757|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	BC024719|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	NM_133241|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm9_v1_chr10_+_86520790_86520790	10.9512	RFX1..5_RFXANK_RFXAP.p2	NM_029685|1700113H08Rik|76640|RIKEN cDNA 1700113H08 gene
mm9_v1_chr7_-_97052120_97052138	10.9391	RFX1..5_RFXANK_RFXAP.p2	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr7_-_52184752_52184788	10.9361	RFX1..5_RFXANK_RFXAP.p2	AK135424|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr4_-_133101912_133101941	10.9335	RFX1..5_RFXANK_RFXAP.p2	NM_010948|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr17_-_45611774_45611886	10.9311	RFX1..5_RFXANK_RFXAP.p2	AY336501|Spats1|71020|spermatogenesis associated, serine-rich 1	AK016586|Spats1|71020|spermatogenesis associated, serine-rich 1	AK165435|Spats1|71020|spermatogenesis associated, serine-rich 1	BC131909|Spats1|71020|spermatogenesis associated, serine-rich 1	AK005865|Spats1|71020|spermatogenesis associated, serine-rich 1	NM_027649|Spats1|71020|spermatogenesis associated, serine-rich 1
mm9_v1_chr5_+_23606402_23606481	10.8941	RFX1..5_RFXANK_RFXAP.p2	NM_001161800|Klhl7|52323|kelch-like 7 (Drosophila)	NM_026448|Klhl7|52323|kelch-like 7 (Drosophila)	AK083358|Klhl7|52323|kelch-like 7 (Drosophila)	AK089072|Klhl7|52323|kelch-like 7 (Drosophila)	AK012326|Klhl7|52323|kelch-like 7 (Drosophila)	BC029154|Klhl7|52323|kelch-like 7 (Drosophila)	AK082520|Klhl7|52323|kelch-like 7 (Drosophila)
mm9_v1_chr7_-_125849230_125849252	10.8732	RFX1..5_RFXANK_RFXAP.p2	AF212860|Gde1|56209|glycerophosphodiester phosphodiesterase 1	AK005361|Gde1|56209|glycerophosphodiester phosphodiesterase 1	NM_019580|Gde1|56209|glycerophosphodiester phosphodiesterase 1
mm9_v1_chr17_-_37088578_37088736	10.8533	RFX1..5_RFXANK_RFXAP.p2	BC027737|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK077455|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK089107|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK162607|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK170104|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK005379|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	NM_029632|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr3_+_99689339_99689354	10.761	RFX1..5_RFXANK_RFXAP.p2	AK029691|Spag17|74362|sperm associated antigen 17	NM_028892|Spag17|74362|sperm associated antigen 17	AK029947|Spag17|74362|sperm associated antigen 17	AK016477|Spag17|74362|sperm associated antigen 17	AY555275|Spag17|74362|sperm associated antigen 17	AY792594|Spag17|74362|sperm associated antigen 17
mm9_v1_chr1_-_84692750_84692795	10.5611	RFX1..5_RFXANK_RFXAP.p2	BC034634|Dner|227325|delta/notch-like EGF-related receptor	NM_152915|Dner|227325|delta/notch-like EGF-related receptor
mm9_v1_chr11_-_8948907_8948993	10.4896	RFX1..5_RFXANK_RFXAP.p2	BC109334|Sun3|194974|Sad1 and UNC84 domain containing 3	AK052771|Sun3|194974|Sad1 and UNC84 domain containing 3	NM_177576|Sun3|194974|Sad1 and UNC84 domain containing 3
mm9_v1_chr2_-_139892477_139892545	10.4603	RFX1..5_RFXANK_RFXAP.p2	AK036512|Tasp1|75812|taspase, threonine aspartase 1	NM_175225|Tasp1|75812|taspase, threonine aspartase 1	AK160983|Tasp1|75812|taspase, threonine aspartase 1	NM_001159640|Tasp1|75812|taspase, threonine aspartase 1	NM_001159641|Tasp1|75812|taspase, threonine aspartase 1	AK146320|Tasp1|75812|taspase, threonine aspartase 1	AK132709|Tasp1|75812|taspase, threonine aspartase 1	BC024597|Tasp1|75812|taspase, threonine aspartase 1	AK015624|Tasp1|75812|taspase, threonine aspartase 1
mm9_v1_chr3_-_146433200_146433208	10.4243	RFX1..5_RFXANK_RFXAP.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr17_+_49754460_49754540	10.4177	RFX1..5_RFXANK_RFXAP.p2	AK083760|Kif6|319991|kinesin family member 6	NM_177052|Kif6|319991|kinesin family member 6	AK043404|Kif6|319991|kinesin family member 6
mm9_v1_chr5_-_115750998_115751012	10.3899	RFX1..5_RFXANK_RFXAP.p2	NM_019682|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr7_-_125849255_125849313	10.3516	RFX1..5_RFXANK_RFXAP.p2	AK004583|Gde1|56209|glycerophosphodiester phosphodiesterase 1	AK150807|Gde1|56209|glycerophosphodiester phosphodiesterase 1
mm9_v1_chr14_-_70553597_70553617	10.3357	RFX1..5_RFXANK_RFXAP.p2	AK050238|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	NM_146055|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	BC021475|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene
mm9_v1_chr19_+_4100914_4101127	10.2715	RFX1..5_RFXANK_RFXAP.p2	BC048150|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	BC044893|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr5_-_97821348_97821397	10.2434	RFX1..5_RFXANK_RFXAP.p2	AK135863|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC139104|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC145776|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	NM_001033191|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	AK133248|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	EU192141|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit
mm9_v1_chr8_+_125856612_125856612	10.2386	RFX1..5_RFXANK_RFXAP.p2	BC049152|Spire2|234857|spire homolog 2 (Drosophila)	BC054072|Spire2|234857|spire homolog 2 (Drosophila)	NM_172287|Spire2|234857|spire homolog 2 (Drosophila)
mm9_v1_chr6_+_29935324_29935353	10.2036	RFX1..5_RFXANK_RFXAP.p2	AK076883|1700023L04Rik|76419|RIKEN cDNA 1700023L04 gene	AK006282|1700023L04Rik|76419|RIKEN cDNA 1700023L04 gene
mm9_v1_chr10_-_79792197_79792217	10.1442	RFX1..5_RFXANK_RFXAP.p2	AK161504|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4	D01093|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4	NM_008793|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr5_-_97885939_97886039	10.144	RFX1..5_RFXANK_RFXAP.p2	AK075761|Gk2|14626|glycerol kinase 2	BC061147|Gk2|14626|glycerol kinase 2	AF117734|Gk2|14626|glycerol kinase 2	NM_010294|Gk2|14626|glycerol kinase 2	BC050764|Gk2|14626|glycerol kinase 2
mm9_v1_chr8_+_80737195_80737240	10.0979	RFX1..5_RFXANK_RFXAP.p2	AK006580|Ttc29|73301|tetratricopeptide repeat domain 29	BC048386|Ttc29|73301|tetratricopeptide repeat domain 29	NM_183096|Ttc29|73301|tetratricopeptide repeat domain 29
mm9_v1_chr17_+_35109647_35109778	10.074	RFX1..5_RFXANK_RFXAP.p2	NM_013558|Hspa1l|15482|heat shock protein 1-like	D85732|Hspa1l|15482|heat shock protein 1-like	BC129895|Hspa1l|15482|heat shock protein 1-like	BC129894|Hspa1l|15482|heat shock protein 1-like
mm9_v1_chr12_-_73286003_73286015	10.0473	RFX1..5_RFXANK_RFXAP.p2	AK015067|4930403N07Rik|73936|RIKEN cDNA 4930403N07 gene	NM_028687|4930403N07Rik|73936|RIKEN cDNA 4930403N07 gene
mm9_v1_chr1_+_93391235_93391270	9.99115	RFX1..5_RFXANK_RFXAP.p2	NM_028718|Traf3ip1|74019|TRAF3 interacting protein 1	AY613437|Traf3ip1|74019|TRAF3 interacting protein 1	BC046538|Traf3ip1|74019|TRAF3 interacting protein 1	BC117868|Traf3ip1|74019|TRAF3 interacting protein 1
mm9_v1_chr9_-_108499855_108499944	9.9061	RFX1..5_RFXANK_RFXAP.p2	AK016685|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK161992|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK038927|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK047714|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	BC111871|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	NM_028944|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK046783|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
mm9_v1_chr17_-_29686501_29686537	9.8636	RFX1..5_RFXANK_RFXAP.p2	BC116865|Tmem217|71138|transmembrane protein 217	BC116867|Tmem217|71138|transmembrane protein 217	BC144829|Tmem217|71138|transmembrane protein 217	AK016810|Tmem217|71138|transmembrane protein 217	NM_001162901|Tmem217|71138|transmembrane protein 217	NM_001162902|Tmem217|71138|transmembrane protein 217
mm9_v1_chr4_+_151470827_151470883	9.81162	RFX1..5_RFXANK_RFXAP.p2	AY605057|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	AY605058|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	NM_001004156|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm9_v1_chr7_-_109069245_109069287	9.79204	RFX1..5_RFXANK_RFXAP.p2	EU627089|Lrrc51|69358|leucine rich repeat containing 51	EU627090|Lrrc51|69358|leucine rich repeat containing 51	NM_001162974|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr2_+_163484132_163484240	9.78977	RFX1..5_RFXANK_RFXAP.p2	AK164716|Pkig|18769|protein kinase inhibitor, gamma	AK168614|Pkig|18769|protein kinase inhibitor, gamma	NM_001164053|Pkig|18769|protein kinase inhibitor, gamma	AK184424|Pkig|18769|protein kinase inhibitor, gamma	AK186035|Pkig|18769|protein kinase inhibitor, gamma	AK186927|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chrX_-_34185389_34185408	9.78732	RFX1..5_RFXANK_RFXAP.p2	AK046007|Akap17b|338351|A kinase (PRKA) anchor protein 17B	AK054091|Akap17b|338351|A kinase (PRKA) anchor protein 17B	NM_001081956|Akap17b|338351|A kinase (PRKA) anchor protein 17B
mm9_v1_chr10_-_80522871_80522963	9.69462	RFX1..5_RFXANK_RFXAP.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr2_+_163484110_163484121	9.68155	RFX1..5_RFXANK_RFXAP.p2	AK135505|Pkig|18769|protein kinase inhibitor, gamma	NM_001039390|Pkig|18769|protein kinase inhibitor, gamma	NM_001039391|Pkig|18769|protein kinase inhibitor, gamma	NM_001164055|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr9_-_103595136_103595138	9.66782	RFX1..5_RFXANK_RFXAP.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr13_+_20564928_20564972	9.65867	RFX1..5_RFXANK_RFXAP.p2	AK053306|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	AK032085|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	BC024727|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	NM_198093|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chr3_-_146433544_146433656	9.63971	RFX1..5_RFXANK_RFXAP.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr1_-_75250520_75250549	9.6232	RFX1..5_RFXANK_RFXAP.p2	BC064020|Ptprn|19275|protein tyrosine phosphatase, receptor type, N
mm9_v1_chr7_-_31839825_31839873	9.5958	RFX1..5_RFXANK_RFXAP.p2	BC024671|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_052991|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_194321|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr4_-_138281116_138281156	9.57179	RFX1..5_RFXANK_RFXAP.p2	AK045964|Ubxn10|212190|UBX domain protein 10	AK161296|Ubxn10|212190|UBX domain protein 10	AK080662|Ubxn10|212190|UBX domain protein 10
mm9_v1_chr16_+_32419787_32419893	9.56438	RFX1..5_RFXANK_RFXAP.p2	BC059716|Tctex1d2|66061|Tctex1 domain containing 2	NM_025329|Tctex1d2|66061|Tctex1 domain containing 2	AK007178|Tctex1d2|66061|Tctex1 domain containing 2	AK002589|Tctex1d2|66061|Tctex1 domain containing 2	AK010027|Tctex1d2|66061|Tctex1 domain containing 2	AK010464|Tctex1d2|66061|Tctex1 domain containing 2	AK004191|Tctex1d2|66061|Tctex1 domain containing 2	BC053332|Tctex1d2|66061|Tctex1 domain containing 2
mm9_v1_chr9_+_53213390_53213402	9.54826	RFX1..5_RFXANK_RFXAP.p2	AK016083|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	NM_029247|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	BC115638|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	BC115639|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene
mm9_v1_chr9_-_110019806_110019945	9.53751	RFX1..5_RFXANK_RFXAP.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chrX_-_49034778_49034778	9.52613	RFX1..5_RFXANK_RFXAP.p2	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr11_+_62875160_62875262	9.50245	RFX1..5_RFXANK_RFXAP.p2	AK016718|Tekt3|71062|tektin 3	AY252101|Tekt3|71062|tektin 3	NM_027660|Tekt3|71062|tektin 3	BC139074|Tekt3|71062|tektin 3	BC139075|Tekt3|71062|tektin 3	BC127605|Tekt3|71062|tektin 3	BC128270|Tekt3|71062|tektin 3
mm9_v1_chr14_+_67530044_67530096	9.48923	RFX1..5_RFXANK_RFXAP.p2	AK043910|Pnma2|239157|paraneoplastic antigen MA2	NM_175498|Pnma2|239157|paraneoplastic antigen MA2	AK220357|Pnma2|239157|paraneoplastic antigen MA2	AK043718|Pnma2|239157|paraneoplastic antigen MA2
mm9_v1_chr7_-_146399089_146399205	9.44744	RFX1..5_RFXANK_RFXAP.p2	NM_001162540|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr1_-_63776891_63776891	9.43984	RFX1..5_RFXANK_RFXAP.p2	BC050786|Mdh1b|76668|malate dehydrogenase 1B, NAD (soluble)	NM_029696|Mdh1b|76668|malate dehydrogenase 1B, NAD (soluble)
mm9_v1_chr7_-_129125061_129125233	9.4238	RFX1..5_RFXANK_RFXAP.p2	AK191299|Cog7|233824|component of oligomeric golgi complex 7	AK030709|Cog7|233824|component of oligomeric golgi complex 7	AK145163|Cog7|233824|component of oligomeric golgi complex 7	AK154693|Cog7|233824|component of oligomeric golgi complex 7	NM_001033318|Cog7|233824|component of oligomeric golgi complex 7	AK172200|Cog7|233824|component of oligomeric golgi complex 7	AK163143|Cog7|233824|component of oligomeric golgi complex 7
mm9_v1_chr11_+_72028639_72028830	9.41211	RFX1..5_RFXANK_RFXAP.p2	AK044443|4930563E22Rik|75304|RIKEN cDNA 4930563E22 gene	NM_001163728|4930563E22Rik|75304|RIKEN cDNA 4930563E22 gene	AK043242|4930563E22Rik|75304|RIKEN cDNA 4930563E22 gene	AK132388|4930563E22Rik|75304|RIKEN cDNA 4930563E22 gene	AK016202|4930563E22Rik|75304|RIKEN cDNA 4930563E22 gene
mm9_v1_chr6_+_34730847_34730979	9.36853	RFX1..5_RFXANK_RFXAP.p2	AK029798|Agbl3|76223|ATP/GTP binding protein-like 3	AK030378|Agbl3|76223|ATP/GTP binding protein-like 3	AK047649|Agbl3|76223|ATP/GTP binding protein-like 3	BC087897|Agbl3|76223|ATP/GTP binding protein-like 3	BC028521|Agbl3|76223|ATP/GTP binding protein-like 3	BC139065|Agbl3|76223|ATP/GTP binding protein-like 3
mm9_v1_chr6_+_55967502_55967523	9.33821	RFX1..5_RFXANK_RFXAP.p2	BC026822|Gsbs|19051|G substrate	NM_011153|Gsbs|19051|G substrate	AF071562|Gsbs|19051|G substrate
mm9_v1_chr5_-_135382602_135382602	9.24821	RFX1..5_RFXANK_RFXAP.p2	AK007170|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369079|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369080|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	BC114542|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_029681|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_194065|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)
mm9_v1_chr4_+_111392665_111392738	9.23317	RFX1..5_RFXANK_RFXAP.p2	AK153098|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr8_+_42325093_42325221	9.23177	RFX1..5_RFXANK_RFXAP.p2	AK133754|Pcm1|18536|pericentriolar material 1	AK011147|Pcm1|18536|pericentriolar material 1	AK141516|Pcm1|18536|pericentriolar material 1	NM_023662|Pcm1|18536|pericentriolar material 1	AF369838|Pcm1|18536|pericentriolar material 1	AB029291|Pcm1|18536|pericentriolar material 1	BC053728|Pcm1|18536|pericentriolar material 1	BC139033|Pcm1|18536|pericentriolar material 1
mm9_v1_chr9_+_20456531_20456579	9.21376	RFX1..5_RFXANK_RFXAP.p2	AK002665|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AB009691|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK003931|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK160228|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK003369|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK054045|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK150652|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	NM_023371|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK139395|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	BC038254|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm9_v1_chr4_-_133101802_133101911	9.17492	RFX1..5_RFXANK_RFXAP.p2	Y15522|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	X81443|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	BC011253|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012777|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK032673|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012321|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK146323|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr7_-_4636141_4636274	9.16318	RFX1..5_RFXANK_RFXAP.p2	AF338351|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm9_v1_chr19_+_4100621_4100621	9.14701	RFX1..5_RFXANK_RFXAP.p2	NM_008851|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	Y08922|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr5_-_137462712_137462731	9.12926	RFX1..5_RFXANK_RFXAP.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr18_+_37424591_37424651	9.09145	RFX1..5_RFXANK_RFXAP.p2	BC132112|Pcdhb1|93872|protocadherin beta 1	BC132296|Pcdhb1|93872|protocadherin beta 1	AY013770|Pcdhb1|93872|protocadherin beta 1	NM_053126|Pcdhb1|93872|protocadherin beta 1
mm9_v1_chr6_-_77929575_77929581	9.07366	RFX1..5_RFXANK_RFXAP.p2	BC079648|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	D25281|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	D25282|Ctnna2|12386|catenin (cadherin associated protein), alpha 2
mm9_v1_chr10_-_89195016_89195045	9.03068	RFX1..5_RFXANK_RFXAP.p2	BC062137|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK088571|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK008409|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	NM_025914|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)
mm9_v1_chr18_-_35821788_35821845	9.00263	RFX1..5_RFXANK_RFXAP.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr14_+_31814801_31814892	8.99765	RFX1..5_RFXANK_RFXAP.p2	BC055709|Glt8d1|76485|glycosyltransferase 8 domain containing 1	BC058731|Glt8d1|76485|glycosyltransferase 8 domain containing 1	AK010388|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr10_+_62442999_62443009	8.96542	RFX1..5_RFXANK_RFXAP.p2	AK011847|Rufy2|70432|RUN and FYVE domain-containing 2	BC017645|Rufy2|70432|RUN and FYVE domain-containing 2	AK173195|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chr11_+_109511803_109511871	8.93151	RFX1..5_RFXANK_RFXAP.p2	AK049832|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK150427|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK146380|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK151124|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	AK153227|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha	BC005697|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr6_+_55967487_55967494	8.91806	RFX1..5_RFXANK_RFXAP.p2	AK078335|Gsbs|19051|G substrate	AF500906|Gsbs|19051|G substrate
mm9_v1_chr7_-_109082300_109082407	8.88677	RFX1..5_RFXANK_RFXAP.p2	AK005758|Lrrc51|69358|leucine rich repeat containing 51	NM_001162973|Lrrc51|69358|leucine rich repeat containing 51	NM_027053|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr1_-_166237573_166237642	8.87729	RFX1..5_RFXANK_RFXAP.p2	AK029787|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160208|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160209|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_025505|Blzf1|66352|basic leucine zipper nuclear factor 1	AK006544|Blzf1|66352|basic leucine zipper nuclear factor 1	AK167493|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr17_+_85489891_85489912	8.85044	RFX1..5_RFXANK_RFXAP.p2	BC138272|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene	BC138273|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chr3_+_154756397_154756433	8.81962	RFX1..5_RFXANK_RFXAP.p2	AK087661|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	NM_028938|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3	AK132656|Lrriq3|74435|leucine-rich repeats and IQ motif containing 3
mm9_v1_chr18_-_12464173_12464188	8.8189	RFX1..5_RFXANK_RFXAP.p2	AK090336|Ankrd29|225187|ankyrin repeat domain 29
mm9_v1_chr11_-_29072713_29072819	8.76866	RFX1..5_RFXANK_RFXAP.p2	BC049150|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	BC037626|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	BC059020|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	AK083953|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene
mm9_v1_chr14_+_31815002_31815071	8.74125	RFX1..5_RFXANK_RFXAP.p2	AK160461|Glt8d1|76485|glycosyltransferase 8 domain containing 1	BC069873|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr1_-_189039299_189039343	8.71796	RFX1..5_RFXANK_RFXAP.p2	AY747687|Spata17|74717|spermatogenesis associated 17	BC089520|Spata17|74717|spermatogenesis associated 17	AK050925|Spata17|74717|spermatogenesis associated 17	NM_028848|Spata17|74717|spermatogenesis associated 17	NM_029067|Spata17|74717|spermatogenesis associated 17
mm9_v1_chr2_-_19475523_19475540	8.71395	RFX1..5_RFXANK_RFXAP.p2	BC132142|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	BC137968|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK014808|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	NM_027600|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK014944|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK033749|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene
mm9_v1_chr11_-_116196604_116196673	8.60475	RFX1..5_RFXANK_RFXAP.p2	AK140847|Foxj1|15223|forkhead box J1	BC082543|Foxj1|15223|forkhead box J1	NM_008240|Foxj1|15223|forkhead box J1
mm9_v1_chr11_-_90499370_90499421	8.57686	RFX1..5_RFXANK_RFXAP.p2	BC032881|Stxbp4|20913|syntaxin binding protein 4	AK012293|Stxbp4|20913|syntaxin binding protein 4	AK032998|Stxbp4|20913|syntaxin binding protein 4	AK049001|Stxbp4|20913|syntaxin binding protein 4	NM_011505|Stxbp4|20913|syntaxin binding protein 4
mm9_v1_chrX_+_91881454_91881500	8.56806	RFX1..5_RFXANK_RFXAP.p2	BC117825|Gspt2|14853|G1 to S phase transition 2	BC117826|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr5_+_20930720_20930881	8.53104	RFX1..5_RFXANK_RFXAP.p2	NM_177869|Fam185a|330050|family with sequence similarity 185, member A	AK030922|Fam185a|330050|family with sequence similarity 185, member A	AK076256|Fam185a|330050|family with sequence similarity 185, member A	BC055342|Fam185a|330050|family with sequence similarity 185, member A
mm9_v1_chr5_-_122821971_122822010	8.52726	RFX1..5_RFXANK_RFXAP.p2	BC061033|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	NM_026883|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	BC057658|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr9_-_123626642_123626742	8.49165	RFX1..5_RFXANK_RFXAP.p2	AK046515|Lztfl1|93730|leucine zipper transcription factor-like 1	BC037045|Lztfl1|93730|leucine zipper transcription factor-like 1	AJ297352|Lztfl1|93730|leucine zipper transcription factor-like 1	BC098224|Lztfl1|93730|leucine zipper transcription factor-like 1	BC026840|Lztfl1|93730|leucine zipper transcription factor-like 1	NM_033322|Lztfl1|93730|leucine zipper transcription factor-like 1	AK054003|Lztfl1|93730|leucine zipper transcription factor-like 1	AK157770|Lztfl1|93730|leucine zipper transcription factor-like 1	AK145263|Lztfl1|93730|leucine zipper transcription factor-like 1	AK030068|Lztfl1|93730|leucine zipper transcription factor-like 1	AK029671|Lztfl1|93730|leucine zipper transcription factor-like 1	AK041091|Lztfl1|93730|leucine zipper transcription factor-like 1	AK147312|Lztfl1|93730|leucine zipper transcription factor-like 1
mm9_v1_chr5_+_77445047_77445068	8.45104	RFX1..5_RFXANK_RFXAP.p2	BC053422|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene	NM_027970|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene	AK006270|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene
mm9_v1_chrX_-_56387239_56387321	8.43185	RFX1..5_RFXANK_RFXAP.p2	U66202|Fgf13|14168|fibroblast growth factor 13	AF020737|Fgf13|14168|fibroblast growth factor 13
mm9_v1_chr15_-_101700048_101700137	8.42468	RFX1..5_RFXANK_RFXAP.p2	BC107395|Krt77|406220|keratin 77	BC107396|Krt77|406220|keratin 77	NM_001003667|Krt77|406220|keratin 77	BC141259|Krt77|406220|keratin 77	AK132513|Krt77|406220|keratin 77
mm9_v1_chr2_+_80479420_80479420	8.35773	RFX1..5_RFXANK_RFXAP.p2	NM_001190179|Nup35|69482|nucleoporin 35
mm9_v1_chr12_-_111920809_111920828	8.30755	RFX1..5_RFXANK_RFXAP.p2	BC048462|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK005606|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK006358|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK006098|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	NM_025488|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene
mm9_v1_chr10_+_61245998_61246044	8.2624	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr2_+_29745239_29745414	8.23624	RFX1..5_RFXANK_RFXAP.p2	AF000968|Odf2|18286|outer dense fiber of sperm tails 2	NM_001113213|Odf2|18286|outer dense fiber of sperm tails 2	NM_001113214|Odf2|18286|outer dense fiber of sperm tails 2	NM_001177659|Odf2|18286|outer dense fiber of sperm tails 2	NM_001177661|Odf2|18286|outer dense fiber of sperm tails 2	AK148523|Odf2|18286|outer dense fiber of sperm tails 2	AK165588|Odf2|18286|outer dense fiber of sperm tails 2	AK143726|Odf2|18286|outer dense fiber of sperm tails 2	AK168415|Odf2|18286|outer dense fiber of sperm tails 2	AK162550|Odf2|18286|outer dense fiber of sperm tails 2	BC057001|Odf2|18286|outer dense fiber of sperm tails 2
mm9_v1_chr17_-_80689434_80689517	8.23096	RFX1..5_RFXANK_RFXAP.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr16_-_91728816_91728882	8.23055	RFX1..5_RFXANK_RFXAP.p2	BC019387|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK008846|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	BC010479|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	NM_133679|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK010433|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1	AK145827|Cryzl1|66609|crystallin, zeta (quinone reductase)-like 1
mm9_v1_chrX_+_83289537_83289537	8.22666	RFX1..5_RFXANK_RFXAP.p2	AK006935|1700072E05Rik|73495|RIKEN cDNA 1700072E05 gene	NM_028554|1700072E05Rik|73495|RIKEN cDNA 1700072E05 gene
mm9_v1_chr8_-_107995282_107995321	8.19681	RFX1..5_RFXANK_RFXAP.p2	AK009771|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK012437|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK155018|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK160507|Tppp3|67971|tubulin polymerization-promoting protein family member 3	NM_026481|Tppp3|67971|tubulin polymerization-promoting protein family member 3
mm9_v1_chr2_+_164311755_164311970	8.17326	RFX1..5_RFXANK_RFXAP.p2	BC030298|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_026797|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr5_+_27231234_27231317	8.16996	RFX1..5_RFXANK_RFXAP.p2	AK051708|Dpp6|13483|dipeptidylpeptidase 6	BC085154|Dpp6|13483|dipeptidylpeptidase 6	NM_001198886|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chrX_-_133275812_133275890	8.15403	RFX1..5_RFXANK_RFXAP.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr4_+_151852250_151852286	8.12364	RFX1..5_RFXANK_RFXAP.p2	AF537131|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	AK084539|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	NM_153424|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	AK016223|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)
mm9_v1_chr14_+_31814578_31814618	8.11095	RFX1..5_RFXANK_RFXAP.p2	NM_001165930|Glt8d1|76485|glycosyltransferase 8 domain containing 1	AK077388|Glt8d1|76485|glycosyltransferase 8 domain containing 1	NM_029626|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr8_-_107995252_107995266	8.08787	RFX1..5_RFXANK_RFXAP.p2	BC010788|Tppp3|67971|tubulin polymerization-promoting protein family member 3
mm9_v1_chrX_-_7783571_7783654	8.07731	RFX1..5_RFXANK_RFXAP.p2	BC027292|Porcn|53627|porcupine homolog (Drosophila)	BC032284|Porcn|53627|porcupine homolog (Drosophila)	AK010405|Porcn|53627|porcupine homolog (Drosophila)	AB036746|Porcn|53627|porcupine homolog (Drosophila)	AB036747|Porcn|53627|porcupine homolog (Drosophila)	AB036748|Porcn|53627|porcupine homolog (Drosophila)	AB036749|Porcn|53627|porcupine homolog (Drosophila)	NM_016913|Porcn|53627|porcupine homolog (Drosophila)	NM_023638|Porcn|53627|porcupine homolog (Drosophila)	NM_145907|Porcn|53627|porcupine homolog (Drosophila)	NM_145908|Porcn|53627|porcupine homolog (Drosophila)
mm9_v1_chr1_+_75518103_75518162	8.0689	RFX1..5_RFXANK_RFXAP.p2	NM_027886|Stk11ip|71728|serine/threonine kinase 11 interacting protein	AK165911|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC061635|Stk11ip|71728|serine/threonine kinase 11 interacting protein	AK156122|Stk11ip|71728|serine/threonine kinase 11 interacting protein	AK004757|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr7_+_97575023_97575086	8.06661	RFX1..5_RFXANK_RFXAP.p2	BC060150|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr4_-_43666412_43666469	8.01182	RFX1..5_RFXANK_RFXAP.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr1_-_58752798_58752832	7.99832	RFX1..5_RFXANK_RFXAP.p2	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr1_+_75233046_75233098	7.97168	RFX1..5_RFXANK_RFXAP.p2	AK171494|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	AK076061|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr15_+_59146590_59147021	7.93713	RFX1..5_RFXANK_RFXAP.p2	AK148419|Sqle|20775|squalene epoxidase	AK138457|Sqle|20775|squalene epoxidase	BC056361|Sqle|20775|squalene epoxidase	NM_009270|Sqle|20775|squalene epoxidase	AK161837|Sqle|20775|squalene epoxidase	AK163502|Sqle|20775|squalene epoxidase	D42048|Sqle|20775|squalene epoxidase	AK202136|Sqle|20775|squalene epoxidase
mm9_v1_chr9_-_62659736_62659749	7.92841	RFX1..5_RFXANK_RFXAP.p2	AK154060|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr9_-_21806980_21807039	7.90446	RFX1..5_RFXANK_RFXAP.p2	BC057069|Ccdc151|77609|coiled-coil domain containing 151	BC051179|Ccdc151|77609|coiled-coil domain containing 151
mm9_v1_chr9_-_6266546_6266546	7.85258	RFX1..5_RFXANK_RFXAP.p2	AK005882|Ddi1|71829|DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	NM_027942|Ddi1|71829|DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)
mm9_v1_chr17_-_28217509_28217583	7.83257	RFX1..5_RFXANK_RFXAP.p2	X52128|Tcp11|21463|t-complex protein 11	BC016610|Tcp11|21463|t-complex protein 11	BC089528|Tcp11|21463|t-complex protein 11	AK053725|Tcp11|21463|t-complex protein 11	BC089527|Tcp11|21463|t-complex protein 11	NM_013687|Tcp11|21463|t-complex protein 11	NM_001085555|Tcp11|21463|t-complex protein 11
mm9_v1_chr4_-_41670160_41670212	7.81171	RFX1..5_RFXANK_RFXAP.p2	AF098508|Dctn3|53598|dynactin 3	AK003255|Dctn3|53598|dynactin 3	BC061120|Dctn3|53598|dynactin 3	AK002720|Dctn3|53598|dynactin 3	AK011840|Dctn3|53598|dynactin 3	AK159344|Dctn3|53598|dynactin 3	NM_001159565|Dctn3|53598|dynactin 3	NM_016890|Dctn3|53598|dynactin 3
mm9_v1_chr18_-_31769504_31769590	7.8021	RFX1..5_RFXANK_RFXAP.p2	BC020087|Slc25a46|67453|solute carrier family 25, member 46	AK030346|Slc25a46|67453|solute carrier family 25, member 46	AK031117|Slc25a46|67453|solute carrier family 25, member 46	AK160834|Slc25a46|67453|solute carrier family 25, member 46	NM_026165|Slc25a46|67453|solute carrier family 25, member 46	AK004625|Slc25a46|67453|solute carrier family 25, member 46	AK008131|Slc25a46|67453|solute carrier family 25, member 46	AK078383|Slc25a46|67453|solute carrier family 25, member 46	AK147936|Slc25a46|67453|solute carrier family 25, member 46
mm9_v1_chr5_-_30848154_30848208	7.80204	RFX1..5_RFXANK_RFXAP.p2	BC099558|Cib4|73259|calcium and integrin binding family member 4	BC118938|Cib4|73259|calcium and integrin binding family member 4	AK006670|Cib4|73259|calcium and integrin binding family member 4	NM_028483|Cib4|73259|calcium and integrin binding family member 4
mm9_v1_chr14_-_49865069_49865102	7.70147	RFX1..5_RFXANK_RFXAP.p2	AK005866|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	BC026534|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	AK007176|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	NM_025956|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene
mm9_v1_chr8_-_108861850_108861887	7.67009	RFX1..5_RFXANK_RFXAP.p2	AK087515|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK076416|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK139226|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK019476|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK162894|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	BC043077|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	NM_021491|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral
mm9_v1_chr9_-_106349891_106349958	7.60727	RFX1..5_RFXANK_RFXAP.p2	AK003653|Abhd14a|68644|abhydrolase domain containing 14A	AB073619|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr17_-_87846158_87846274	7.55367	RFX1..5_RFXANK_RFXAP.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr2_-_75819804_75820023	7.46589	RFX1..5_RFXANK_RFXAP.p2	BC004773|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK045096|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK029535|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK019670|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	NM_030188|Ttc30a1|78802|tetratricopeptide repeat domain 30A1
mm9_v1_chr15_-_82953160_82953169	7.46027	RFX1..5_RFXANK_RFXAP.p2	FJ687153|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	BC012523|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr6_-_90760116_90760132	7.4586	RFX1..5_RFXANK_RFXAP.p2	NM_001134384|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr2_+_25264823_25264862	7.45246	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr9_+_108816949_108816949	7.44057	RFX1..5_RFXANK_RFXAP.p2	AK006292|Tmem89|69384|transmembrane protein 89	BC111913|Tmem89|69384|transmembrane protein 89	NM_027066|Tmem89|69384|transmembrane protein 89
mm9_v1_chr2_+_145760519_145760551	7.42071	RFX1..5_RFXANK_RFXAP.p2	AK019712|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK038772|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	NM_175280|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK086391|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107030|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107031|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC057361|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC058733|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene
mm9_v1_chr16_-_93603971_93604059	7.41788	RFX1..5_RFXANK_RFXAP.p2	BC029101|Setd4|224440|SET domain containing 4	AY037804|Setd4|224440|SET domain containing 4	NM_145482|Setd4|224440|SET domain containing 4
mm9_v1_chr9_-_21095328_21095652	7.37844	RFX1..5_RFXANK_RFXAP.p2	AK140808|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U20497|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	BC013898|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U19597|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK144737|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK132906|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	NM_009878|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm9_v1_chr16_+_32496350_32496366	7.33604	RFX1..5_RFXANK_RFXAP.p2	AK132780|Zdhhc19|245308|zinc finger, DHHC domain containing 19	AK133398|Zdhhc19|245308|zinc finger, DHHC domain containing 19	BC049761|Zdhhc19|245308|zinc finger, DHHC domain containing 19	NM_199309|Zdhhc19|245308|zinc finger, DHHC domain containing 19
mm9_v1_chr7_+_19661811_19661908	7.32199	RFX1..5_RFXANK_RFXAP.p2	S60312|Dmwd|13401|dystrophia myotonica-containing WD repeat motif
mm9_v1_chr11_-_114657186_114657223	7.31184	RFX1..5_RFXANK_RFXAP.p2	BC060053|Btbd17|72014|BTB (POZ) domain containing 17	BC122876|Btbd17|72014|BTB (POZ) domain containing 17	AK032100|Btbd17|72014|BTB (POZ) domain containing 17	NM_028055|Btbd17|72014|BTB (POZ) domain containing 17	AK046050|Btbd17|72014|BTB (POZ) domain containing 17	AK005160|Btbd17|72014|BTB (POZ) domain containing 17	BC057599|Btbd17|72014|BTB (POZ) domain containing 17
mm9_v1_chr13_-_93253967_93253985	7.28543	RFX1..5_RFXANK_RFXAP.p2	AK015100|Fam151b|73942|family with sequence similarity 151, member B	AK162422|Fam151b|73942|family with sequence similarity 151, member B	NM_001163627|Fam151b|73942|family with sequence similarity 151, member B
mm9_v1_chr14_+_54873808_54873916	7.27773	RFX1..5_RFXANK_RFXAP.p2	AK030250|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr11_+_4060345_4060409	7.26468	RFX1..5_RFXANK_RFXAP.p2	NM_026175|Sf3a1|67465|splicing factor 3a, subunit 1	AK051703|Sf3a1|67465|splicing factor 3a, subunit 1	AK030223|Sf3a1|67465|splicing factor 3a, subunit 1	AK004763|Sf3a1|67465|splicing factor 3a, subunit 1	AK160061|Sf3a1|67465|splicing factor 3a, subunit 1	AK134178|Sf3a1|67465|splicing factor 3a, subunit 1	AK029095|Sf3a1|67465|splicing factor 3a, subunit 1	BC029753|Sf3a1|67465|splicing factor 3a, subunit 1	AK028829|Sf3a1|67465|splicing factor 3a, subunit 1
mm9_v1_chr4_-_77857594_77857662	7.2632	RFX1..5_RFXANK_RFXAP.p2	AK086248|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr11_+_68913653_68913659	7.25488	RFX1..5_RFXANK_RFXAP.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr5_-_24501570_24501713	7.25144	RFX1..5_RFXANK_RFXAP.p2	AK032238|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr2_-_6244125_6244167	7.23913	RFX1..5_RFXANK_RFXAP.p2	AK005972|1700014B07Rik|72248|RIKEN cDNA 1700014B07 gene
mm9_v1_chr10_-_78215809_78215811	7.2105	RFX1..5_RFXANK_RFXAP.p2	AK016452|Ccdc105|70976|coiled-coil domain containing 105	NM_027630|Ccdc105|70976|coiled-coil domain containing 105
mm9_v1_chr7_-_148067703_148067786	7.20222	RFX1..5_RFXANK_RFXAP.p2	BC025878|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	AK075861|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	FJ621493|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	EU886466|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	AF299339|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	NM_001127351|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	NM_001177804|Sirt3|64384|sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)
mm9_v1_chr9_+_105297721_105297851	7.20046	RFX1..5_RFXANK_RFXAP.p2	BC058377|Aste1|66595|asteroid homolog 1 (Drosophila)	NM_025651|Aste1|66595|asteroid homolog 1 (Drosophila)	BC098471|Aste1|66595|asteroid homolog 1 (Drosophila)	AK030661|Aste1|66595|asteroid homolog 1 (Drosophila)
mm9_v1_chr4_+_137990567_137990674	7.18437	RFX1..5_RFXANK_RFXAP.p2	NM_026689|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK170149|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK002416|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK083295|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	BC019516|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK044088|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK076419|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK153956|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	EU935009|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1
mm9_v1_chr10_-_116387419_116387512	7.11471	RFX1..5_RFXANK_RFXAP.p2	BC080289|Rab3ip|216363|RAB3A interacting protein	NM_001003950|Rab3ip|216363|RAB3A interacting protein	AK152122|Rab3ip|216363|RAB3A interacting protein
mm9_v1_chr5_-_115750649_115750671	7.09227	RFX1..5_RFXANK_RFXAP.p2	BC085492|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr7_+_146398878_146398888	7.08708	RFX1..5_RFXANK_RFXAP.p2	BC050816|Lrrc27|76612|leucine rich repeat containing 27	NM_027164|Lrrc27|76612|leucine rich repeat containing 27
mm9_v1_chr1_-_92049975_92049975	7.06066	RFX1..5_RFXANK_RFXAP.p2	AK015512|Iqca|74918|IQ motif containing with AAA domain	AK016353|Iqca|74918|IQ motif containing with AAA domain	NM_029122|Iqca|74918|IQ motif containing with AAA domain
mm9_v1_chrX_+_72082534_72082534	6.99752	RFX1..5_RFXANK_RFXAP.p2	NM_001081670|Gm5936|546325|predicted gene 5936
mm9_v1_chr16_-_85173851_85173917	6.96482	RFX1..5_RFXANK_RFXAP.p2	X59379|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_183081058_183081062	6.96214	RFX1..5_RFXANK_RFXAP.p2	NM_030131|Cnih4|98417|cornichon homolog 4 (Drosophila)
mm9_v1_chr12_-_88488272_88488550	6.95717	RFX1..5_RFXANK_RFXAP.p2	AK043713|Pomt2|217734|protein-O-mannosyltransferase 2	AK050915|Pomt2|217734|protein-O-mannosyltransferase 2	BC079589|Pomt2|217734|protein-O-mannosyltransferase 2	BC052045|Pomt2|217734|protein-O-mannosyltransferase 2	BC062965|Pomt2|217734|protein-O-mannosyltransferase 2	AY090482|Pomt2|217734|protein-O-mannosyltransferase 2	AF246235|Pomt2|217734|protein-O-mannosyltransferase 2	AK043573|Pomt2|217734|protein-O-mannosyltransferase 2
mm9_v1_chr5_+_130555291_130555503	6.95444	RFX1..5_RFXANK_RFXAP.p2	AK150753|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_001130476|Tpst1|22021|protein-tyrosine sulfotransferase 1	BC012666|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr2_-_5635547_5635807	6.93073	RFX1..5_RFXANK_RFXAP.p2	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr8_-_108020769_108020996	6.92883	RFX1..5_RFXANK_RFXAP.p2	AK038593|Zdhhc1|70796|zinc finger, DHHC domain containing 1	NM_175160|Zdhhc1|70796|zinc finger, DHHC domain containing 1
mm9_v1_chr17_-_46888942_46888996	6.92729	RFX1..5_RFXANK_RFXAP.p2	AK220209|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK031742|Cnpy3|72029|canopy 3 homolog (zebrafish)
mm9_v1_chr9_+_108997946_108997990	6.86486	RFX1..5_RFXANK_RFXAP.p2	NM_172775|Plxnb1|235611|plexin B1
mm9_v1_chr19_-_10379342_10379355	6.84382	RFX1..5_RFXANK_RFXAP.p2	AK147384|Dagla|269060|diacylglycerol lipase, alpha
mm9_v1_chr2_-_127614580_127614637	6.84356	RFX1..5_RFXANK_RFXAP.p2	AF127180|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AF176210|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AJ243223|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	BC118953|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767895|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767896|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767897|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767898|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	NM_016902|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174553|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174554|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AK159627|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)
mm9_v1_chr16_-_85173764_85173823	6.83826	RFX1..5_RFXANK_RFXAP.p2	AK218334|App|11820|amyloid beta (A4) precursor protein	AY267348|App|11820|amyloid beta (A4) precursor protein	AK148439|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr6_+_48345584_48345680	6.82821	RFX1..5_RFXANK_RFXAP.p2	AK040525|Krba1|77827|KRAB-A domain containing 1	NM_133922|Krba1|77827|KRAB-A domain containing 1	AB041543|Krba1|77827|KRAB-A domain containing 1	AK158136|4930447G04Rik|74869|RIKEN cDNA 4930447G04 gene	AK128931|Krba1|77827|KRAB-A domain containing 1	AK173281|Krba1|77827|KRAB-A domain containing 1	BC066816|Krba1|77827|KRAB-A domain containing 1
mm9_v1_chr5_-_136646451_136646559	6.81639	RFX1..5_RFXANK_RFXAP.p2	BC115648|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC115649|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK195764|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK215306|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK079619|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC066070|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK087038|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK036013|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK042940|Orai2|269717|ORAI calcium release-activated calcium modulator 2	NM_178751|Orai2|269717|ORAI calcium release-activated calcium modulator 2
mm9_v1_chr11_-_69575192_69575469	6.78695	RFX1..5_RFXANK_RFXAP.p2	AF016712|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137893|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137894|Amac1|56293|acyl-malonyl condensing enzyme 1	NM_019871|Amac1|56293|acyl-malonyl condensing enzyme 1	AK077181|Amac1|56293|acyl-malonyl condensing enzyme 1
mm9_v1_chr18_+_37979242_37979328	6.75146	RFX1..5_RFXANK_RFXAP.p2	BC138677|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464160|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AY013813|Pcdhgc5|93708|protocadherin gamma subfamily C, 5
mm9_v1_chr1_-_166237342_166237430	6.71312	RFX1..5_RFXANK_RFXAP.p2	AK005489|Blzf1|66352|basic leucine zipper nuclear factor 1	AK168933|Blzf1|66352|basic leucine zipper nuclear factor 1	BC027025|Blzf1|66352|basic leucine zipper nuclear factor 1	AK171167|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr11_+_22412271_22412295	6.67028	RFX1..5_RFXANK_RFXAP.p2	NM_153596|Tmem17|103765|transmembrane protein 17	BC030386|Tmem17|103765|transmembrane protein 17
mm9_v1_chr1_-_59293936_59294089	6.6653	RFX1..5_RFXANK_RFXAP.p2	AK029858|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_001159948|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC046828|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC031479|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	AB053307|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_028717|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_146109|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)
mm9_v1_chr10_-_126632763_126632797	6.61692	RFX1..5_RFXANK_RFXAP.p2	AK205953|Dtx3|80904|deltex 3 homolog (Drosophila)	BC099687|Dtx3|80904|deltex 3 homolog (Drosophila)	NM_030714|Dtx3|80904|deltex 3 homolog (Drosophila)	BC048434|Dtx3|80904|deltex 3 homolog (Drosophila)	AK148444|Dtx3|80904|deltex 3 homolog (Drosophila)
mm9_v1_chr11_-_3256143_3256143	6.54754	RFX1..5_RFXANK_RFXAP.p2	AB012092|Limk2|16886|LIM motif-containing protein kinase 2	AB012291|Limk2|16886|LIM motif-containing protein kinase 2	NM_001034030|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr6_+_128325473_128325533	6.53368	RFX1..5_RFXANK_RFXAP.p2	AK016804|4933413G19Rik|71149|RIKEN cDNA 4933413G19 gene	AK187908|Foxm1|14235|forkhead box M1	AK161342|4933413G19Rik|71149|RIKEN cDNA 4933413G19 gene	NM_027697|4933413G19Rik|71149|RIKEN cDNA 4933413G19 gene	AK218223|Foxm1|14235|forkhead box M1
mm9_v1_chr6_+_34730416_34730462	6.50285	RFX1..5_RFXANK_RFXAP.p2	AK029793|Agbl3|76223|ATP/GTP binding protein-like 3	DQ867031|Agbl3|76223|ATP/GTP binding protein-like 3	DQ867032|Agbl3|76223|ATP/GTP binding protein-like 3	NM_178630|Agbl3|76223|ATP/GTP binding protein-like 3	AK054066|Agbl3|76223|ATP/GTP binding protein-like 3	AK018326|Agbl3|76223|ATP/GTP binding protein-like 3
mm9_v1_chr8_-_81345034_81345050	6.4562	RFX1..5_RFXANK_RFXAP.p2	AK158236|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_001191004|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_030145|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr11_+_108286571_108286590	6.42985	RFX1..5_RFXANK_RFXAP.p2	NM_029606|Ccdc46|76380|coiled-coil domain containing 46	AK160317|Ccdc46|76380|coiled-coil domain containing 46
mm9_v1_chr6_-_25639835_25639849	6.3502	RFX1..5_RFXANK_RFXAP.p2	BC031918|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr18_+_39933150_39933172	6.34755	RFX1..5_RFXANK_RFXAP.p2	AK077154|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	NM_011033|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	BC051134|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	AK131715|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	X75959|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2
mm9_v1_chr3_-_54858963_54858976	6.34506	RFX1..5_RFXANK_RFXAP.p2	AK077114|Ccna1|12427|cyclin A1	NM_007628|Ccna1|12427|cyclin A1	X84311|Ccna1|12427|cyclin A1
mm9_v1_chr9_-_72339762_72339907	6.2842	RFX1..5_RFXANK_RFXAP.p2	AK008505|Tex9|21778|testis expressed gene 9	AK012189|Tex9|21778|testis expressed gene 9	AK018568|Tex9|21778|testis expressed gene 9	AK032490|Tex9|21778|testis expressed gene 9	AK141174|Tex9|21778|testis expressed gene 9	NM_009359|Tex9|21778|testis expressed gene 9	BC141033|Tex9|21778|testis expressed gene 9	BC145184|Tex9|21778|testis expressed gene 9	BC145185|Tex9|21778|testis expressed gene 9	BC145186|Tex9|21778|testis expressed gene 9
mm9_v1_chr11_+_67466129_67466154	6.26657	RFX1..5_RFXANK_RFXAP.p2	AK172943|Gas7|14457|growth arrest specific 7
mm9_v1_chr7_+_87391261_87391440	6.25868	RFX1..5_RFXANK_RFXAP.p2	AK029565|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	NM_177765|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK007167|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK161519|Ttll13|269954|tubulin tyrosine ligase-like family, member 13
mm9_v1_chr19_-_11205360_11205367	6.22486	RFX1..5_RFXANK_RFXAP.p2	AK006056|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene	NM_027058|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene
mm9_v1_chr4_+_10801637_10801754	6.21238	RFX1..5_RFXANK_RFXAP.p2	NM_026005|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	AK011950|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	AK146358|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	BC058777|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene
mm9_v1_chr17_+_34092753_34092872	6.0868	RFX1..5_RFXANK_RFXAP.p2	AK051732|Vps52|224705|vacuolar protein sorting 52 (yeast)	AK052523|Vps52|224705|vacuolar protein sorting 52 (yeast)	NM_172620|Vps52|224705|vacuolar protein sorting 52 (yeast)	BC063329|Vps52|224705|vacuolar protein sorting 52 (yeast)	AK042520|Vps52|224705|vacuolar protein sorting 52 (yeast)
mm9_v1_chr8_-_13974679_13974776	6.07921	RFX1..5_RFXANK_RFXAP.p2	BC099613|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK166972|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK166875|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK077810|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC132465|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC132467|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC145286|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK163687|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	NM_173744|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene
mm9_v1_chr11_-_35793951_35794016	6.06159	RFX1..5_RFXANK_RFXAP.p2	AK220259|Wwc1|211652|WW, C2 and coiled-coil domain containing 1
mm9_v1_chr1_+_75233043_75233043	6.05358	RFX1..5_RFXANK_RFXAP.p2	BC011090|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr7_-_140793797_140793840	6.02713	RFX1..5_RFXANK_RFXAP.p2	BC100509|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene	NM_028654|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene	AK015080|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene
mm9_v1_chr9_+_110148568_110148708	5.99893	RFX1..5_RFXANK_RFXAP.p2	AF461091|Cspg5|29873|chondroitin sulfate proteoglycan 5
mm9_v1_chr3_+_94938009_94938098	5.98158	RFX1..5_RFXANK_RFXAP.p2	AK154180|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	NM_153121|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	BC024838|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK054348|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK011517|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1
mm9_v1_chr19_+_44368165_44368165	5.9762	RFX1..5_RFXANK_RFXAP.p2	AK147406|Scd2|20250|stearoyl-Coenzyme A desaturase 2	NM_009128|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr18_-_78403178_78403178	5.9553	RFX1..5_RFXANK_RFXAP.p2	AF258601|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_001110274|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr5_+_91360221_91360225	5.95204	RFX1..5_RFXANK_RFXAP.p2	NM_026788|Mthfd2l|665563|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
mm9_v1_chr10_-_13588578_13588812	5.91826	RFX1..5_RFXANK_RFXAP.p2	AK008210|Aig1|66253|androgen-induced 1	NM_025446|Aig1|66253|androgen-induced 1	AK162306|Aig1|66253|androgen-induced 1	AK005332|Aig1|66253|androgen-induced 1	AK084050|Aig1|66253|androgen-induced 1	BC035305|Aig1|66253|androgen-induced 1
mm9_v1_chr5_+_120881778_120882006	5.89044	RFX1..5_RFXANK_RFXAP.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr16_+_57121795_57121895	5.86388	RFX1..5_RFXANK_RFXAP.p2	AK145458|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC057096|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK012084|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK083586|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK150429|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	NM_138599|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK161720|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139420|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139421|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK169809|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK122356|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr10_+_62442963_62442971	5.80066	RFX1..5_RFXANK_RFXAP.p2	AK045485|Rufy2|70432|RUN and FYVE domain-containing 2	NM_027425|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chr15_-_103045710_103045798	5.76098	RFX1..5_RFXANK_RFXAP.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr7_-_30512012_30512050	5.71236	RFX1..5_RFXANK_RFXAP.p2	BC144969|Catsperg2|76718|cation channel, sperm-associated, gamma 2	AK077059|Catsperg2|76718|cation channel, sperm-associated, gamma 2	AK138347|Catsperg2|76718|cation channel, sperm-associated, gamma 2	NM_029714|Catsperg2|76718|cation channel, sperm-associated, gamma 2	AK006911|Catsperg2|76718|cation channel, sperm-associated, gamma 2
mm9_v1_chr9_-_64188945_64189063	5.70021	RFX1..5_RFXANK_RFXAP.p2	AK035357|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK032451|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	BC056939|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK173310|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK150851|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK151780|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK153433|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	NM_001001295|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like
mm9_v1_chr10_+_5057034_5057137	5.69855	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr9_-_26815760_26815835	5.62793	RFX1..5_RFXANK_RFXAP.p2	AK210283|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr19_+_47253484_47253552	5.5946	RFX1..5_RFXANK_RFXAP.p2	BC058386|Neurl1a|18011|neuralized homolog 1A (Drosophila)	AK046382|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr1_+_75518349_75518365	5.55141	RFX1..5_RFXANK_RFXAP.p2	AK171989|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC042403|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr7_-_148399978_148399978	5.51664	RFX1..5_RFXANK_RFXAP.p2	BC119093|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	BC119119|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	BC144834|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	NM_028050|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene
mm9_v1_chr2_-_130985746_130985825	5.50998	RFX1..5_RFXANK_RFXAP.p2	AK003406|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	NM_026091|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	BC071212|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	AK006622|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene
mm9_v1_chr16_+_4835415_4835415	5.50072	RFX1..5_RFXANK_RFXAP.p2	AK133365|4930562C15Rik|78809|RIKEN cDNA 4930562C15 gene	NM_030192|4930562C15Rik|78809|RIKEN cDNA 4930562C15 gene
mm9_v1_chr12_-_105011795_105011804	5.47289	RFX1..5_RFXANK_RFXAP.p2	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr8_-_36028698_36028768	5.44851	RFX1..5_RFXANK_RFXAP.p2	BC057370|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	AK080913|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	NM_175091|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm9_v1_chrX_+_91881407_91881417	5.43322	RFX1..5_RFXANK_RFXAP.p2	NM_008179|Gspt2|14853|G1 to S phase transition 2	AK050859|Gspt2|14853|G1 to S phase transition 2	AK019241|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr11_+_110858832_110858871	5.43046	RFX1..5_RFXANK_RFXAP.p2	AK032192|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK140249|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK045447|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chr6_+_8898613_8898694	5.42356	RFX1..5_RFXANK_RFXAP.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr2_+_158436493_158436936	5.3795	RFX1..5_RFXANK_RFXAP.p2	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr16_-_3908647_3908696	5.36839	RFX1..5_RFXANK_RFXAP.p2	AK012792|1700037C18Rik|73261|RIKEN cDNA 1700037C18 gene	AK161085|1700037C18Rik|73261|RIKEN cDNA 1700037C18 gene	NM_028484|1700037C18Rik|73261|RIKEN cDNA 1700037C18 gene
mm9_v1_chr5_+_14025270_14025485	5.33009	RFX1..5_RFXANK_RFXAP.p2	AK141295|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_011348|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93947|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93948|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	BC057956|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK142340|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK159214|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm9_v1_chr2_+_167757825_167757866	5.32387	RFX1..5_RFXANK_RFXAP.p2	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr15_+_102162136_102162200	5.22206	RFX1..5_RFXANK_RFXAP.p2	NM_021713|Myg1|60315|melanocyte proliferating gene 1	AF289484|Myg1|60315|melanocyte proliferating gene 1	BC028501|Myg1|60315|melanocyte proliferating gene 1	AK017955|Myg1|60315|melanocyte proliferating gene 1	AK002656|Myg1|60315|melanocyte proliferating gene 1	AK004104|Myg1|60315|melanocyte proliferating gene 1	BC023124|Myg1|60315|melanocyte proliferating gene 1	AK013232|Myg1|60315|melanocyte proliferating gene 1
mm9_v1_chr12_-_105011767_105011793	5.20325	RFX1..5_RFXANK_RFXAP.p2	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr11_+_69715314_69715319	5.1757	RFX1..5_RFXANK_RFXAP.p2	BC158107|Neurl4|216860|neuralized homolog 4 (Drosophila)	BC172172|Neurl4|216860|neuralized homolog 4 (Drosophila)
mm9_v1_chr10_-_80204945_80204960	5.16121	RFX1..5_RFXANK_RFXAP.p2	BC037477|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC048786|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC022171|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	AB004305|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	NM_007460|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr6_+_129483295_129483425	5.13534	RFX1..5_RFXANK_RFXAP.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr18_+_67624482_67624504	5.1051	RFX1..5_RFXANK_RFXAP.p2	NM_144867|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr9_+_49148731_49148766	5.10274	RFX1..5_RFXANK_RFXAP.p2	X55674|Drd2|13489|dopamine receptor D2	BC105663|Drd2|13489|dopamine receptor D2	BC105664|Drd2|13489|dopamine receptor D2	BC105665|Drd2|13489|dopamine receptor D2	BC105666|Drd2|13489|dopamine receptor D2	NM_010077|Drd2|13489|dopamine receptor D2
mm9_v1_chr7_-_53435334_53435402	5.10053	RFX1..5_RFXANK_RFXAP.p2	BC141411|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK086472|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	NM_011510|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm9_v1_chr12_+_66066728_66067042	5.06878	RFX1..5_RFXANK_RFXAP.p2	NM_177805|Fam179b|328108|family with sequence similarity 179, member B	AK141238|Fam179b|328108|family with sequence similarity 179, member B	BC157958|Fam179b|328108|family with sequence similarity 179, member B	BC158008|Fam179b|328108|family with sequence similarity 179, member B	BC172117|Fam179b|328108|family with sequence similarity 179, member B	AK039995|Fam179b|328108|family with sequence similarity 179, member B
mm9_v1_chr9_+_107830799_107830799	5.05953	RFX1..5_RFXANK_RFXAP.p2	AK014908|4921517D21Rik|67722|RIKEN cDNA 4921517D21 gene	BC115773|4921517D21Rik|67722|RIKEN cDNA 4921517D21 gene	NM_026338|4921517D21Rik|67722|RIKEN cDNA 4921517D21 gene
mm9_v1_chr17_-_80689815_80689815	5.03503	RFX1..5_RFXANK_RFXAP.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr6_+_33979444_33979454	4.98548	RFX1..5_RFXANK_RFXAP.p2	AK014976|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	NM_028886|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	AK029666|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing	AK045903|Lrguk|74354|leucine-rich repeats and guanylate kinase domain containing
mm9_v1_chr1_+_167391318_167391475	4.97513	RFX1..5_RFXANK_RFXAP.p2	AK011889|Brp44|70456|brain protein 44	NM_027430|Brp44|70456|brain protein 44	AK151522|Brp44|70456|brain protein 44	AK002233|Brp44|70456|brain protein 44	AK008044|Brp44|70456|brain protein 44
mm9_v1_chr15_+_99125666_99125690	4.97034	RFX1..5_RFXANK_RFXAP.p2	BC058389|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	BC082994|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	AK140075|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	AK164947|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm9_v1_chr7_+_127883556_127883560	4.96949	RFX1..5_RFXANK_RFXAP.p2	AK086942|Vwa3a|233813|von Willebrand factor A domain containing 3A	AK136898|Vwa3a|233813|von Willebrand factor A domain containing 3A
mm9_v1_chrX_-_99266499_99266645	4.94167	RFX1..5_RFXANK_RFXAP.p2	BC132391|Rgag4|331474|retrotransposon gag domain containing 4	BC137795|Rgag4|331474|retrotransposon gag domain containing 4	AK032151|Rgag4|331474|retrotransposon gag domain containing 4	AK220436|Rgag4|331474|retrotransposon gag domain containing 4	NM_183318|Rgag4|331474|retrotransposon gag domain containing 4
mm9_v1_chr6_-_30459703_30459756	4.93561	RFX1..5_RFXANK_RFXAP.p2	AK089486|Tmem209|72649|transmembrane protein 209	AK170465|Tmem209|72649|transmembrane protein 209	BC057109|Tmem209|72649|transmembrane protein 209	NM_178625|Tmem209|72649|transmembrane protein 209	BC052187|Tmem209|72649|transmembrane protein 209	AK029366|Tmem209|72649|transmembrane protein 209	AK089962|Tmem209|72649|transmembrane protein 209	AK078544|Tmem209|72649|transmembrane protein 209	AK044877|Tmem209|72649|transmembrane protein 209	AK084222|Tmem209|72649|transmembrane protein 209
mm9_v1_chr2_+_35516774_35517011	4.91842	RFX1..5_RFXANK_RFXAP.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr1_-_137335507_137335652	4.89894	RFX1..5_RFXANK_RFXAP.p2	AK137320|Nav1|215690|neuron navigator 1
mm9_v1_chr16_+_90220986_90221006	4.87246	RFX1..5_RFXANK_RFXAP.p2	BC048874|Sod1|20655|superoxide dismutase 1, soluble	NM_011434|Sod1|20655|superoxide dismutase 1, soluble	AK080908|Sod1|20655|superoxide dismutase 1, soluble	AK080929|Sod1|20655|superoxide dismutase 1, soluble	AK086878|Sod1|20655|superoxide dismutase 1, soluble	BC086886|Sod1|20655|superoxide dismutase 1, soluble
mm9_v1_chr10_+_33624916_33624916	4.85289	RFX1..5_RFXANK_RFXAP.p2	BC138000|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)	BC138001|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)	NM_001162957|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)
mm9_v1_chr9_-_106349966_106349991	4.85113	RFX1..5_RFXANK_RFXAP.p2	BC006879|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chrX_-_133275693_133275798	4.8046	RFX1..5_RFXANK_RFXAP.p2	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr6_+_113342490_113342490	4.76196	RFX1..5_RFXANK_RFXAP.p2	AM690746|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_133923|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr6_+_88034684_88034764	4.73014	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr8_+_69035638_69035658	4.72153	RFX1..5_RFXANK_RFXAP.p2	NM_028927|Tktl2|74419|transketolase-like 2	AK016603|Tktl2|74419|transketolase-like 2	AK029871|Tktl2|74419|transketolase-like 2	BC132110|Tktl2|74419|transketolase-like 2	BC132298|Tktl2|74419|transketolase-like 2
mm9_v1_chr7_+_52965052_52965376	4.71973	RFX1..5_RFXANK_RFXAP.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr11_+_116976475_116976498	4.70207	RFX1..5_RFXANK_RFXAP.p2	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr12_+_73542852_73542935	4.67105	RFX1..5_RFXANK_RFXAP.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr6_+_119125257_119125415	4.66657	RFX1..5_RFXANK_RFXAP.p2	AK153860|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	NM_001033379|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141162|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141163|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK050548|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK049193|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK216011|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK047334|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)
mm9_v1_chr11_-_72028494_72028582	4.66236	RFX1..5_RFXANK_RFXAP.p2	AK005655|Med31|67279|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)	AK013990|Med31|67279|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)	AK045566|Med31|67279|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)
mm9_v1_chr12_-_70891641_70891693	4.65729	RFX1..5_RFXANK_RFXAP.p2	BC115909|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	BC118055|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	AK016781|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	NM_183294|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm9_v1_chr17_-_57150821_57150840	4.65319	RFX1..5_RFXANK_RFXAP.p2	BC031123|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr9_-_56008595_56008764	4.64835	RFX1..5_RFXANK_RFXAP.p2	AK089494|Tspan3|56434|tetraspanin 3	AK154919|Tspan3|56434|tetraspanin 3	AB009021|Tspan3|56434|tetraspanin 3	AF133427|Tspan3|56434|tetraspanin 3	AB072450|Tspan3|56434|tetraspanin 3	AK053325|Tspan3|56434|tetraspanin 3	AK141951|Tspan3|56434|tetraspanin 3	AK006798|Tspan3|56434|tetraspanin 3	AK152175|Tspan3|56434|tetraspanin 3
mm9_v1_chr12_+_87087488_87087539	4.51491	RFX1..5_RFXANK_RFXAP.p2	AY260574|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AY260575|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AY260576|Mfsd7c|217721|major facilitator superfamily domain containing 7C	BC011209|Mfsd7c|217721|major facilitator superfamily domain containing 7C	NM_145447|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AK145696|Mfsd7c|217721|major facilitator superfamily domain containing 7C
mm9_v1_chr13_-_95055235_95055506	4.5099	RFX1..5_RFXANK_RFXAP.p2	BC034283|Scamp1|107767|secretory carrier membrane protein 1	NM_029153|Scamp1|107767|secretory carrier membrane protein 1	AK135058|Scamp1|107767|secretory carrier membrane protein 1	AK154671|Scamp1|107767|secretory carrier membrane protein 1	AK170343|Scamp1|107767|secretory carrier membrane protein 1
mm9_v1_chr10_-_80204963_80204982	4.50794	RFX1..5_RFXANK_RFXAP.p2	BC053066|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	AK155825|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr12_-_71448300_71448379	4.50141	RFX1..5_RFXANK_RFXAP.p2	AK129109|Trim9|94090|tripartite motif-containing 9	AK049907|Trim9|94090|tripartite motif-containing 9	AK035807|Trim9|94090|tripartite motif-containing 9	AK028280|Trim9|94090|tripartite motif-containing 9	AK048875|Trim9|94090|tripartite motif-containing 9	AK163123|Trim9|94090|tripartite motif-containing 9
mm9_v1_chr10_+_62443021_62443063	4.48757	RFX1..5_RFXANK_RFXAP.p2	BC137736|Rufy2|70432|RUN and FYVE domain-containing 2	BC137737|Rufy2|70432|RUN and FYVE domain-containing 2	BC038265|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chr11_+_69715343_69715451	4.47664	RFX1..5_RFXANK_RFXAP.p2	NM_001013414|Neurl4|216860|neuralized homolog 4 (Drosophila)	AK157107|Neurl4|216860|neuralized homolog 4 (Drosophila)
mm9_v1_chr15_+_79059603_79059603	4.43098	RFX1..5_RFXANK_RFXAP.p2	NM_008837|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chrX_+_150916544_150916544	4.42295	RFX1..5_RFXANK_RFXAP.p2	AK016025|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene	NM_029199|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene
mm9_v1_chr15_+_82086506_82086614	4.38739	RFX1..5_RFXANK_RFXAP.p2	AK005178|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene	BC023061|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene	BC094356|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene
mm9_v1_chr10_+_86168555_86168616	4.32889	RFX1..5_RFXANK_RFXAP.p2	NM_001003910|BC030307|103220|cDNA sequence BC030307	NM_001003939|BC030307|103220|cDNA sequence BC030307	AY651019|BC030307|103220|cDNA sequence BC030307	BC030307|BC030307|103220|cDNA sequence BC030307	AK133195|BC030307|103220|cDNA sequence BC030307
mm9_v1_chr8_-_86118291_86118339	4.30119	RFX1..5_RFXANK_RFXAP.p2	AK179321|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK010513|Tecr|106529|trans-2,3-enoyl-CoA reductase	BC094046|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr2_+_152253202_152253368	4.25129	RFX1..5_RFXANK_RFXAP.p2	BC144945|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC137826|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144943|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144944|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene
mm9_v1_chr10_-_49508472_49508559	4.24703	RFX1..5_RFXANK_RFXAP.p2	D10054|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	AK141539|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_001111268|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_010349|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm9_v1_chr17_-_56749096_56749193	4.19878	RFX1..5_RFXANK_RFXAP.p2	BC056164|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	BC049674|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075942|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AY091637|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075961|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	NM_153152|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene
mm9_v1_chr16_-_96413824_96413863	4.15257	RFX1..5_RFXANK_RFXAP.p2	AK031481|Lca5l|385668|Leber congenital amaurosis 5-like	AK029554|Lca5l|385668|Leber congenital amaurosis 5-like	AK133316|Lca5l|385668|Leber congenital amaurosis 5-like	NM_001001492|Lca5l|385668|Leber congenital amaurosis 5-like
mm9_v1_chr7_+_6124083_6124158	4.1198	RFX1..5_RFXANK_RFXAP.p2	BC023396|Zfp444|72667|zinc finger protein 444	AK169973|Zfp444|72667|zinc finger protein 444	AK018079|Zfp444|72667|zinc finger protein 444	NM_001146024|Zfp444|72667|zinc finger protein 444	NM_028316|Zfp444|72667|zinc finger protein 444	AK089886|Zfp444|72667|zinc finger protein 444	BC037180|Zfp444|72667|zinc finger protein 444	BC139359|Zfp444|72667|zinc finger protein 444	BC139361|Zfp444|72667|zinc finger protein 444
mm9_v1_chr1_+_193801253_193801416	4.09114	RFX1..5_RFXANK_RFXAP.p2	BC017602|Rd3|74023|retinal degeneration 3	NM_001177900|Rd3|74023|retinal degeneration 3	NM_023727|Rd3|74023|retinal degeneration 3	AK045045|Rd3|74023|retinal degeneration 3	AB030195|Rd3|74023|retinal degeneration 3	BC103778|Rd3|74023|retinal degeneration 3	AK014383|Rd3|74023|retinal degeneration 3	BC116937|Rd3|74023|retinal degeneration 3	BC116935|Rd3|74023|retinal degeneration 3
mm9_v1_chr8_-_81344956_81345026	4.08681	RFX1..5_RFXANK_RFXAP.p2	BC099484|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC098230|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC030427|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK141884|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK078392|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK161686|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK019126|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr13_-_36209100_36209228	4.07617	RFX1..5_RFXANK_RFXAP.p2	BC080772|Lyrm4|380840|LYR motif containing 4	BC034664|Lyrm4|380840|LYR motif containing 4	AK050553|Lyrm4|380840|LYR motif containing 4	NM_201358|Lyrm4|380840|LYR motif containing 4
mm9_v1_chr12_+_10376776_10376849	4.04068	RFX1..5_RFXANK_RFXAP.p2	NM_027588|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AK014892|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	BC060976|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AF356186|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AJ295253|Nt5c1b|70881|5'-nucleotidase, cytosolic IB
mm9_v1_chr11_+_8948594_8948715	4.02059	RFX1..5_RFXANK_RFXAP.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr11_+_67466072_67466088	4.009	RFX1..5_RFXANK_RFXAP.p2	AF133184|Gas7|14457|growth arrest specific 7
mm9_v1_chr5_+_136108487_136108731	4.00612	RFX1..5_RFXANK_RFXAP.p2	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr2_+_164311639_164311740	4.00067	RFX1..5_RFXANK_RFXAP.p2	NM_001048227|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr6_-_29559792_29559839	3.99181	RFX1..5_RFXANK_RFXAP.p2	AK049446|Tnpo3|320938|transportin 3	BC075678|Tnpo3|320938|transportin 3
mm9_v1_chr5_-_42099382_42099426	3.98742	RFX1..5_RFXANK_RFXAP.p2	AK159493|Rab28|100972|RAB28, member RAS oncogene family	BC004580|Rab28|100972|RAB28, member RAS oncogene family	NM_027295|Rab28|100972|RAB28, member RAS oncogene family	AK012286|Rab28|100972|RAB28, member RAS oncogene family
mm9_v1_chr1_-_136201384_136201419	3.98395	RFX1..5_RFXANK_RFXAP.p2	AK078263|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	AK170782|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm9_v1_chr16_-_90810621_90810657	3.94505	RFX1..5_RFXANK_RFXAP.p2	AK017495|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	AK050735|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	NM_029497|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm9_v1_chrX_-_146875443_146875447	3.94493	RFX1..5_RFXANK_RFXAP.p2	NM_001164686|Tmem29|382245|transmembrane protein 29
mm9_v1_chr11_-_33743416_33743626	3.94339	RFX1..5_RFXANK_RFXAP.p2	AY647242|Kcnip1|70357|Kv channel-interacting protein 1	AY171234|Kcnip1|70357|Kv channel-interacting protein 1	BC034241|Kcnip1|70357|Kv channel-interacting protein 1	DQ148493|Kcnip1|70357|Kv channel-interacting protein 1	AK013657|Kcnip1|70357|Kv channel-interacting protein 1	AK014313|Kcnip1|70357|Kv channel-interacting protein 1	AK046398|Kcnip1|70357|Kv channel-interacting protein 1	AK045948|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190885|Kcnip1|70357|Kv channel-interacting protein 1	NM_027398|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr7_-_107810868_107810907	3.93604	RFX1..5_RFXANK_RFXAP.p2	BC024756|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF000272|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF101053|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163182|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_013746|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr16_-_85173930_85173941	3.92674	RFX1..5_RFXANK_RFXAP.p2	AK159718|App|11820|amyloid beta (A4) precursor protein	M18373|App|11820|amyloid beta (A4) precursor protein	U84012|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_69873535_69873574	3.92418	RFX1..5_RFXANK_RFXAP.p2	AK015884|Spag16|66722|sperm associated antigen 16	BC120668|Spag16|66722|sperm associated antigen 16	BC145006|Spag16|66722|sperm associated antigen 16	AF490391|Spag16|66722|sperm associated antigen 16	NM_029160|Spag16|66722|sperm associated antigen 16	AK083083|Spag16|66722|sperm associated antigen 16
mm9_v1_chr11_-_45768976_45768987	3.90859	RFX1..5_RFXANK_RFXAP.p2	BC092541|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK017532|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr2_+_58998938_58998957	3.90584	RFX1..5_RFXANK_RFXAP.p2	BC019128|Pkp4|227937|plakophilin 4	BC037597|Pkp4|227937|plakophilin 4
mm9_v1_chr15_-_10488393_10488422	3.8887	RFX1..5_RFXANK_RFXAP.p2	AK015027|Ttc23l|75777|tetratricopeptide repeat domain 23-like	BC132384|Ttc23l|75777|tetratricopeptide repeat domain 23-like	BC145852|Ttc23l|75777|tetratricopeptide repeat domain 23-like	NM_029430|Ttc23l|75777|tetratricopeptide repeat domain 23-like
mm9_v1_chr10_-_25018912_25018969	3.86343	RFX1..5_RFXANK_RFXAP.p2	BC099487|Akap7|432442|A kinase (PRKA) anchor protein 7	NM_018747|Akap7|432442|A kinase (PRKA) anchor protein 7	AY301068|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr18_+_37979199_37979219	3.86256	RFX1..5_RFXANK_RFXAP.p2	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr18_+_65047408_65047414	3.83227	RFX1..5_RFXANK_RFXAP.p2	NM_001114386|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr1_+_174412343_174412487	3.83187	RFX1..5_RFXANK_RFXAP.p2	NM_001145800|Igsf9|93842|immunoglobulin superfamily, member 9	AK053544|Igsf9|93842|immunoglobulin superfamily, member 9	AK078536|Igsf9|93842|immunoglobulin superfamily, member 9	BC034594|Igsf9|93842|immunoglobulin superfamily, member 9	AK145121|Igsf9|93842|immunoglobulin superfamily, member 9	AF317839|Igsf9|93842|immunoglobulin superfamily, member 9	NM_033608|Igsf9|93842|immunoglobulin superfamily, member 9	BC040281|Igsf9|93842|immunoglobulin superfamily, member 9
mm9_v1_chr10_-_79337153_79337378	3.82365	RFX1..5_RFXANK_RFXAP.p2	AK220474|BC005764|216152|cDNA sequence BC005764	AF541278|BC005764|216152|cDNA sequence BC005764	NM_001170935|BC005764|216152|cDNA sequence BC005764	NM_181681|BC005764|216152|cDNA sequence BC005764
mm9_v1_chr1_+_83156336_83156343	3.82319	RFX1..5_RFXANK_RFXAP.p2	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr16_-_85173918_85173926	3.79378	RFX1..5_RFXANK_RFXAP.p2	AK161976|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr4_+_154460679_154460722	3.79241	RFX1..5_RFXANK_RFXAP.p2	NM_001081100|Morn1|76866|MORN repeat containing 1	BC132619|Morn1|76866|MORN repeat containing 1	BC145744|Morn1|76866|MORN repeat containing 1	AK013714|Morn1|76866|MORN repeat containing 1	AK015161|Morn1|76866|MORN repeat containing 1	AK045316|Morn1|76866|MORN repeat containing 1	AK148312|Morn1|76866|MORN repeat containing 1
mm9_v1_chr2_+_118489015_118489059	3.77947	RFX1..5_RFXANK_RFXAP.p2	AK158913|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK158944|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr2_+_29643739_29643849	3.76504	RFX1..5_RFXANK_RFXAP.p2	BC139373|Coq4|227683|coenzyme Q4 homolog (yeast)	BC145615|Coq4|227683|coenzyme Q4 homolog (yeast)	BC139376|Coq4|227683|coenzyme Q4 homolog (yeast)	AK050459|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039422|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039676|Coq4|227683|coenzyme Q4 homolog (yeast)	NM_178693|Coq4|227683|coenzyme Q4 homolog (yeast)	AK043574|Coq4|227683|coenzyme Q4 homolog (yeast)
mm9_v1_chr16_-_33056255_33056271	3.75936	RFX1..5_RFXANK_RFXAP.p2	BC049990|Iqcg|69707|IQ motif containing G	AK158170|Iqcg|69707|IQ motif containing G	NM_178378|Iqcg|69707|IQ motif containing G
mm9_v1_chr4_-_56815114_56815205	3.75104	RFX1..5_RFXANK_RFXAP.p2	BC052387|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF140786|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK031367|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF367244|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF387811|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK035944|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	NM_026079|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK147153|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein
mm9_v1_chr11_+_82202401_82202479	3.73326	RFX1..5_RFXANK_RFXAP.p2	NM_023438|Tmem132e|270893|transmembrane protein 132E	BC137906|Tmem132e|270893|transmembrane protein 132E	BC145026|Tmem132e|270893|transmembrane protein 132E
mm9_v1_chr9_+_110716497_110716530	3.71797	RFX1..5_RFXANK_RFXAP.p2	AK006612|Prss44|73336|protease, serine, 44	NM_148940|Prss44|73336|protease, serine, 44	AB162857|Prss44|73336|protease, serine, 44	AB047758|Prss44|73336|protease, serine, 44
mm9_v1_chr11_-_65981945_65982052	3.64135	RFX1..5_RFXANK_RFXAP.p2	AK082443|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK030981|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK044263|Dnahc9|237806|dynein, axonemal, heavy chain 9	NM_001099633|Dnahc9|237806|dynein, axonemal, heavy chain 9
mm9_v1_chr2_+_140221224_140221330	3.64036	RFX1..5_RFXANK_RFXAP.p2	BC038317|Macrod2|72899|MACRO domain containing 2	BC027552|Macrod2|72899|MACRO domain containing 2	BC028443|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr13_-_77274698_77274775	3.61518	RFX1..5_RFXANK_RFXAP.p2	AK047775|Ankrd32|105377|ankyrin repeat domain 32	BC100362|Ankrd32|105377|ankyrin repeat domain 32	BC061188|Ankrd32|105377|ankyrin repeat domain 32	AK012253|Ankrd32|105377|ankyrin repeat domain 32	AK089501|Ankrd32|105377|ankyrin repeat domain 32	AK171473|Ankrd32|105377|ankyrin repeat domain 32	NM_134071|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr17_-_53602610_53602645	3.54511	RFX1..5_RFXANK_RFXAP.p2	AK167235|Efhb|211482|EF hand domain family, member B	BC132103|Efhb|211482|EF hand domain family, member B	BC137880|Efhb|211482|EF hand domain family, member B	AK029550|Efhb|211482|EF hand domain family, member B	NM_172497|Efhb|211482|EF hand domain family, member B
mm9_v1_chr2_+_80479021_80479037	3.5442	RFX1..5_RFXANK_RFXAP.p2	AK009187|Nup35|69482|nucleoporin 35	AK145775|Nup35|69482|nucleoporin 35
mm9_v1_chr3_+_106524599_106524599	3.52505	RFX1..5_RFXANK_RFXAP.p2	AK030201|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	NM_001039488|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	NM_028081|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr6_+_137200819_137200985	3.52407	RFX1..5_RFXANK_RFXAP.p2	NM_001164401|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	NM_011216|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AK045929|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AF135166|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	BC052743|Ptpro|19277|protein tyrosine phosphatase, receptor type, O
mm9_v1_chr12_+_74040868_74041042	3.52209	RFX1..5_RFXANK_RFXAP.p2	AK017544|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AF135267|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AF050130|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AK029309|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	NM_011384|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	BC138838|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	BC138839|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AJ011787|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)
mm9_v1_chr5_+_150242274_150242293	3.50399	RFX1..5_RFXANK_RFXAP.p2	AK087319|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC120819|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144997|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144998|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144999|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	NM_029464|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK161244|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK016369|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene
mm9_v1_chr3_-_32635636_32635679	3.50107	RFX1..5_RFXANK_RFXAP.p2	BC038065|Mrpl47|74600|mitochondrial ribosomal protein L47	BC029173|Mrpl47|74600|mitochondrial ribosomal protein L47	BC087953|Mrpl47|74600|mitochondrial ribosomal protein L47	NM_029017|Mrpl47|74600|mitochondrial ribosomal protein L47
mm9_v1_chr8_-_86118344_86118395	3.49523	RFX1..5_RFXANK_RFXAP.p2	AK013558|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK002384|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK010984|Tecr|106529|trans-2,3-enoyl-CoA reductase	BC019984|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK020708|Tecr|106529|trans-2,3-enoyl-CoA reductase	NM_027179|Tecr|106529|trans-2,3-enoyl-CoA reductase	NM_134118|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr4_-_99495806_99495876	3.47038	RFX1..5_RFXANK_RFXAP.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr4_+_43419445_43419451	3.42228	RFX1..5_RFXANK_RFXAP.p2	AK132170|Rusc2|100213|RUN and SH3 domain containing 2	NM_199057|Rusc2|100213|RUN and SH3 domain containing 2	AK122263|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr11_-_87811778_87811799	3.41628	RFX1..5_RFXANK_RFXAP.p2	BC049621|Dynll2|68097|dynein light chain LC8-type 2	AK006876|Dynll2|68097|dynein light chain LC8-type 2	NM_001168471|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr1_+_167391489_167391498	3.37638	RFX1..5_RFXANK_RFXAP.p2	BC018324|Brp44|70456|brain protein 44
mm9_v1_chr8_+_28153059_28153137	3.37278	RFX1..5_RFXANK_RFXAP.p2	AK049905|Prosc|114863|proline synthetase co-transcribed	BC047992|Prosc|114863|proline synthetase co-transcribed	AK160172|Prosc|114863|proline synthetase co-transcribed	AK032308|Prosc|114863|proline synthetase co-transcribed	AK134549|Prosc|114863|proline synthetase co-transcribed	AK191605|Prosc|114863|proline synthetase co-transcribed	AK203439|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr12_-_105011807_105011857	3.36619	RFX1..5_RFXANK_RFXAP.p2	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr6_-_124761078_124761358	3.29493	RFX1..5_RFXANK_RFXAP.p2	AK216486|Tpi1|21991|triosephosphate isomerase 1	AK201708|Tpi1|21991|triosephosphate isomerase 1	AK191907|Tpi1|21991|triosephosphate isomerase 1	AK191323|Tpi1|21991|triosephosphate isomerase 1	AK190112|Tpi1|21991|triosephosphate isomerase 1	AK204501|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr8_-_73316331_73316346	3.2878	RFX1..5_RFXANK_RFXAP.p2	NM_199308|Mast3|546071|microtubule associated serine/threonine kinase 3	AK140821|Mast3|546071|microtubule associated serine/threonine kinase 3
mm9_v1_chr17_+_85489932_85489979	3.28062	RFX1..5_RFXANK_RFXAP.p2	AK007130|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chr1_+_24685711_24685764	3.25707	RFX1..5_RFXANK_RFXAP.p2	AK158982|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr6_-_113145321_113145377	3.25396	RFX1..5_RFXANK_RFXAP.p2	AK220449|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	BC085130|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	AK046437|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	NM_177763|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4
mm9_v1_chr2_+_164312087_164312169	3.24377	RFX1..5_RFXANK_RFXAP.p2	AK013571|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr1_-_157264358_157264387	3.24195	RFX1..5_RFXANK_RFXAP.p2	HQ022853|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131096|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131098|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131102|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF198104|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ022845|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323679|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323680|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr2_+_164312023_164312078	3.20878	RFX1..5_RFXANK_RFXAP.p2	BC019947|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	AY187289|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr2_-_25947915_25947915	3.20687	RFX1..5_RFXANK_RFXAP.p2	NM_001037098|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm9_v1_chr2_+_80478985_80479013	3.18783	RFX1..5_RFXANK_RFXAP.p2	AF411517|Nup35|69482|nucleoporin 35	AK136109|Nup35|69482|nucleoporin 35	BC048814|Nup35|69482|nucleoporin 35
mm9_v1_chr17_+_72022808_72022818	3.14015	RFX1..5_RFXANK_RFXAP.p2	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr17_-_36046961_36047023	3.13419	RFX1..5_RFXANK_RFXAP.p2	AK049682|Atat1|73242|alpha tubulin acetyltransferase 1	AK014265|Atat1|73242|alpha tubulin acetyltransferase 1	AK011750|Atat1|73242|alpha tubulin acetyltransferase 1	AK034725|Atat1|73242|alpha tubulin acetyltransferase 1	AK133694|Atat1|73242|alpha tubulin acetyltransferase 1	BC030669|Atat1|73242|alpha tubulin acetyltransferase 1	AK011350|Atat1|73242|alpha tubulin acetyltransferase 1	BC028847|Atat1|73242|alpha tubulin acetyltransferase 1	AK011838|Atat1|73242|alpha tubulin acetyltransferase 1	AK028297|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142744|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142745|Atat1|73242|alpha tubulin acetyltransferase 1	NM_028476|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr4_-_109203808_109203901	3.13013	RFX1..5_RFXANK_RFXAP.p2	AK005726|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK015869|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125547|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125549|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK019777|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	NM_026291|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene
mm9_v1_chr1_+_187278726_187278919	3.11936	RFX1..5_RFXANK_RFXAP.p2	AK053537|Slc30a10|226781|solute carrier family 30, member 10	NM_001033286|Slc30a10|226781|solute carrier family 30, member 10	BC054548|Slc30a10|226781|solute carrier family 30, member 10	AK136932|Slc30a10|226781|solute carrier family 30, member 10
mm9_v1_chr19_+_47253309_47253309	3.10857	RFX1..5_RFXANK_RFXAP.p2	BC099702|Neurl1a|18011|neuralized homolog 1A (Drosophila)	NM_021360|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr9_-_112088452_112088452	3.10273	RFX1..5_RFXANK_RFXAP.p2	NM_001177618|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr8_+_97508270_97508298	3.09353	RFX1..5_RFXANK_RFXAP.p2	AK141886|Gpr56|14766|G protein-coupled receptor 56	NM_018882|Gpr56|14766|G protein-coupled receptor 56
mm9_v1_chr2_+_84890611_84890701	3.06903	RFX1..5_RFXANK_RFXAP.p2	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr6_+_129483215_129483234	3.06657	RFX1..5_RFXANK_RFXAP.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr17_+_12312128_12312218	3.04496	RFX1..5_RFXANK_RFXAP.p2	AK005139|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	NM_026644|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	AK166917|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	BC047281|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm9_v1_chr17_-_46889082_46889212	3.02824	RFX1..5_RFXANK_RFXAP.p2	AK086940|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK143428|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK010702|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK005532|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK049358|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK141306|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK082340|Cnpy3|72029|canopy 3 homolog (zebrafish)	AF361644|Cnpy3|72029|canopy 3 homolog (zebrafish)	BC013549|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK085617|Cnpy3|72029|canopy 3 homolog (zebrafish)	NM_028065|Cnpy3|72029|canopy 3 homolog (zebrafish)
mm9_v1_chr18_+_24629351_24629462	3.01408	RFX1..5_RFXANK_RFXAP.p2	AK012467|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	BC084681|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	AK011228|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	BC029246|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	AK018391|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	NM_026529|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene	AK013030|2700062C07Rik|68046|RIKEN cDNA 2700062C07 gene
mm9_v1_chr7_-_116895708_116895795	3.00929	RFX1..5_RFXANK_RFXAP.p2	AK009147|Tmem9b|56786|TMEM9 domain family, member B	AK077253|Tmem9b|56786|TMEM9 domain family, member B	AK007430|Tmem9b|56786|TMEM9 domain family, member B	BC002208|Tmem9b|56786|TMEM9 domain family, member B	NM_020050|Tmem9b|56786|TMEM9 domain family, member B	AK147127|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr5_-_5514729_5514737	2.99284	RFX1..5_RFXANK_RFXAP.p2	AK039672|Cldn12|64945|claudin 12
mm9_v1_chr5_+_31175057_31175130	2.98628	RFX1..5_RFXANK_RFXAP.p2	BC027046|Tmem214|68796|transmembrane protein 214	AK190374|Tmem214|68796|transmembrane protein 214
mm9_v1_chr6_+_129483154_129483185	2.95627	RFX1..5_RFXANK_RFXAP.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr16_+_93762803_93762828	2.94752	RFX1..5_RFXANK_RFXAP.p2	AK122403|Dopey2|70028|dopey family member 2
mm9_v1_chr2_+_90744878_90745017	2.90727	RFX1..5_RFXANK_RFXAP.p2	BC025103|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK010998|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	NM_025991|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK014373|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4
mm9_v1_chr4_-_12015073_12015153	2.90351	RFX1..5_RFXANK_RFXAP.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr4_-_141488999_141489010	2.89836	RFX1..5_RFXANK_RFXAP.p2	AK148490|Fhad1|329977|forkhead-associated (FHA) phosphopeptide binding domain 1
mm9_v1_chr11_+_87666566_87666748	2.87459	RFX1..5_RFXANK_RFXAP.p2	BC158122|Mks1|380718|Meckel syndrome, type 1	BC150995|Mks1|380718|Meckel syndrome, type 1	DQ177342|Mks1|380718|Meckel syndrome, type 1	NM_001039684|Mks1|380718|Meckel syndrome, type 1	AK170482|Mks1|380718|Meckel syndrome, type 1	AK030982|Mks1|380718|Meckel syndrome, type 1
mm9_v1_chr15_-_74583382_74583477	2.87028	RFX1..5_RFXANK_RFXAP.p2	AF141377|Lynx1|23936|Ly6/neurotoxin 1	AK013827|Lynx1|23936|Ly6/neurotoxin 1	NM_011838|Lynx1|23936|Ly6/neurotoxin 1	AK165295|Lynx1|23936|Ly6/neurotoxin 1	AK165314|Lynx1|23936|Ly6/neurotoxin 1	AK162920|Lynx1|23936|Ly6/neurotoxin 1	AK161907|Lynx1|23936|Ly6/neurotoxin 1
mm9_v1_chr6_-_18059054_18059060	2.85775	RFX1..5_RFXANK_RFXAP.p2	AF459789|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AK016595|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC058859|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_023729|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1
mm9_v1_chr5_-_5514787_5514975	2.85681	RFX1..5_RFXANK_RFXAP.p2	NM_001193660|Cldn12|64945|claudin 12	AK166110|Cldn12|64945|claudin 12	AK049331|Cldn12|64945|claudin 12	AK132155|Cldn12|64945|claudin 12	NM_001193659|Cldn12|64945|claudin 12	NM_001193661|Cldn12|64945|claudin 12	AK128999|Cldn12|64945|claudin 12	BC024057|Cldn12|64945|claudin 12	NM_022890|Cldn12|64945|claudin 12
mm9_v1_chr9_-_50425371_50425373	2.85447	RFX1..5_RFXANK_RFXAP.p2	AK133777|AU019823|270156|expressed sequence AU019823
mm9_v1_chr13_+_36209724_36209798	2.83063	RFX1..5_RFXANK_RFXAP.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr6_+_129483206_129483210	2.78867	RFX1..5_RFXANK_RFXAP.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr2_-_168427037_168427156	2.77664	RFX1..5_RFXANK_RFXAP.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr3_+_145600974_145601015	2.77151	RFX1..5_RFXANK_RFXAP.p2	BC049577|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK010378|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	BC115465|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	NM_025555|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK019404|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK077565|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene
mm9_v1_chr4_+_147374850_147374855	2.76432	RFX1..5_RFXANK_RFXAP.p2	AK147180|Nppa|230899|natriuretic peptide type A	BC089615|Nppa|230899|natriuretic peptide type A	NM_008725|Nppa|230899|natriuretic peptide type A
mm9_v1_chr15_-_78004452_78004551	2.75007	RFX1..5_RFXANK_RFXAP.p2	AK011196|Ift27|67042|intraflagellar transport 27 homolog (Chlamydomonas)	BC017514|Ift27|67042|intraflagellar transport 27 homolog (Chlamydomonas)	NM_025931|Ift27|67042|intraflagellar transport 27 homolog (Chlamydomonas)
mm9_v1_chr16_-_85173944_85173969	2.74868	RFX1..5_RFXANK_RFXAP.p2	AK159245|App|11820|amyloid beta (A4) precursor protein	BC070409|App|11820|amyloid beta (A4) precursor protein	AK133639|App|11820|amyloid beta (A4) precursor protein	AK159352|App|11820|amyloid beta (A4) precursor protein	AK030583|App|11820|amyloid beta (A4) precursor protein	AK128971|App|11820|amyloid beta (A4) precursor protein	NM_001198823|App|11820|amyloid beta (A4) precursor protein	NM_001198824|App|11820|amyloid beta (A4) precursor protein	NM_001198825|App|11820|amyloid beta (A4) precursor protein	NM_001198826|App|11820|amyloid beta (A4) precursor protein	NM_007471|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr5_-_115273443_115273497	2.74071	RFX1..5_RFXANK_RFXAP.p2	AK148078|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC089033|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC096574|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	AK012147|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	NM_181075|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene
mm9_v1_chrX_-_133527570_133527593	2.73502	RFX1..5_RFXANK_RFXAP.p2	NM_001114179|Mcart6|67062|mitochondrial carrier triple repeat 6
mm9_v1_chr7_-_27944870_27944933	2.73115	RFX1..5_RFXANK_RFXAP.p2	AK179611|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr10_+_116387609_116387672	2.66412	RFX1..5_RFXANK_RFXAP.p2	AK084517|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene	AK016788|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene
mm9_v1_chr4_+_117222924_117223239	2.65109	RFX1..5_RFXANK_RFXAP.p2	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr4_+_56815248_56815272	2.64614	RFX1..5_RFXANK_RFXAP.p2	BC048548|BC026590|230234|cDNA sequence BC026590	BC062190|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr7_-_125273061_125273141	2.61927	RFX1..5_RFXANK_RFXAP.p2	BC046792|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF133669|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF223953|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	BC010196|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152885|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK090001|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150042|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151272|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152565|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK163655|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167912|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168245|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK169191|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154644|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167872|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168172|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154355|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF172088|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167888|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	NM_019419|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr6_+_129483238_129483284	2.58338	RFX1..5_RFXANK_RFXAP.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr11_-_3795097_3795128	2.57097	RFX1..5_RFXANK_RFXAP.p2	AK049235|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene	BC048445|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene	AK006513|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene	AK015005|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene	AK081396|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene	NM_026150|4921536K21Rik|67430|RIKEN cDNA 4921536K21 gene
mm9_v1_chr12_-_111934580_111934653	2.56294	RFX1..5_RFXANK_RFXAP.p2	BC049124|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK004658|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	NM_010480|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1
mm9_v1_chr8_-_97220127_97220176	2.55661	RFX1..5_RFXANK_RFXAP.p2	AK018198|Pllp|67801|plasma membrane proteolipid	AK032540|Pllp|67801|plasma membrane proteolipid	BC024534|Pllp|67801|plasma membrane proteolipid	AK002477|Pllp|67801|plasma membrane proteolipid	NM_026385|Pllp|67801|plasma membrane proteolipid
mm9_v1_chr15_+_99125768_99125839	2.55137	RFX1..5_RFXANK_RFXAP.p2	AF135440|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	NM_018786|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm9_v1_chr3_+_40439675_40439741	2.55021	RFX1..5_RFXANK_RFXAP.p2	NM_175515|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	AK035092|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC125523|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC132387|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)
mm9_v1_chr16_+_4741612_4741615	2.48792	RFX1..5_RFXANK_RFXAP.p2	AF054669|Hmox2|15369|heme oxygenase (decycling) 2	NM_010443|Hmox2|15369|heme oxygenase (decycling) 2	AF029874|Hmox2|15369|heme oxygenase (decycling) 2
mm9_v1_chr2_+_80478960_80478972	2.46252	RFX1..5_RFXANK_RFXAP.p2	NM_027091|Nup35|69482|nucleoporin 35	AK089997|Nup35|69482|nucleoporin 35
mm9_v1_chr17_-_57150708_57150759	2.43165	RFX1..5_RFXANK_RFXAP.p2	BC003336|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	BC023081|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	NM_133801|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168236|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168243|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK013002|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK078048|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr1_+_137914574_137914625	2.42156	RFX1..5_RFXANK_RFXAP.p2	NM_025439|Tmem9|66241|transmembrane protein 9	AK005248|Tmem9|66241|transmembrane protein 9	AK021225|Tmem9|66241|transmembrane protein 9	AK154423|Tmem9|66241|transmembrane protein 9	BC016524|Tmem9|66241|transmembrane protein 9	AK134909|Tmem9|66241|transmembrane protein 9	BC048017|Tmem9|66241|transmembrane protein 9	BC020291|Tmem9|66241|transmembrane protein 9
mm9_v1_chr5_-_143656888_143656920	2.41951	RFX1..5_RFXANK_RFXAP.p2	BC115599|Fbxl18|231863|F-box and leucine-rich repeat protein 18	BC139739|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK154354|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK144757|Fbxl18|231863|F-box and leucine-rich repeat protein 18	NM_001033312|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr1_+_42752608_42752622	2.40372	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr13_+_91600662_91600791	2.38541	RFX1..5_RFXANK_RFXAP.p2	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr5_-_115750913_115750938	2.37415	RFX1..5_RFXANK_RFXAP.p2	BC008106|Dynll1|56455|dynein light chain LC8-type 1	BC034258|Dynll1|56455|dynein light chain LC8-type 1	AF020185|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr2_+_58998885_58998932	2.37104	RFX1..5_RFXANK_RFXAP.p2	AK146720|Pkp4|227937|plakophilin 4	NM_026361|Pkp4|227937|plakophilin 4	NM_175464|Pkp4|227937|plakophilin 4
mm9_v1_chr12_+_86337250_86337338	2.33681	RFX1..5_RFXANK_RFXAP.p2	AK044440|Ylpm1|56531|YLP motif containing 1	NM_178363|Ylpm1|56531|YLP motif containing 1	BC031541|Ylpm1|56531|YLP motif containing 1	AK087500|Ylpm1|56531|YLP motif containing 1	AB033168|Ylpm1|56531|YLP motif containing 1
mm9_v1_chr9_-_87150351_87150370	2.32529	RFX1..5_RFXANK_RFXAP.p2	AK163175|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	AK135482|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	NM_199316|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	AK019554|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene
mm9_v1_chr7_+_97574821_97574821	2.31139	RFX1..5_RFXANK_RFXAP.p2	NM_027298|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr18_+_48204988_48204988	2.27903	RFX1..5_RFXANK_RFXAP.p2	BC089539|Gm5506|433182|predicted gene 5506	NM_001025388|Gm5506|433182|predicted gene 5506
mm9_v1_chr14_+_31764562_31764704	2.27352	RFX1..5_RFXANK_RFXAP.p2	AK078809|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AJ223071|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	Y09234|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK147381|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK132803|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK149584|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK168094|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	BC057939|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AF099067|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	NM_011849|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK144130|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4
mm9_v1_chr5_+_31172103_31172117	2.25011	RFX1..5_RFXANK_RFXAP.p2	BC026651|Tmem214|68796|transmembrane protein 214
mm9_v1_chr12_-_111934448_111934564	2.24325	RFX1..5_RFXANK_RFXAP.p2	AK147641|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC018232|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC046614|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK183519|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC057287|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC009003|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC037151|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC094024|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166729|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166847|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK157849|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167086|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168605|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK088975|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK146944|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166696|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166720|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166867|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167008|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167065|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167114|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167171|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167188|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168407|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168620|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166896|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK077095|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK161276|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1
mm9_v1_chr11_-_94382743_94382835	2.22515	RFX1..5_RFXANK_RFXAP.p2	AK029929|Mycbpap|104601|MYCBP associated protein	NM_170671|Mycbpap|104601|MYCBP associated protein
mm9_v1_chr10_+_61912236_61912284	2.21593	RFX1..5_RFXANK_RFXAP.p2	AK135283|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	AK042417|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	AK054359|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene	BC019469|4930507D05Rik|74706|RIKEN cDNA 4930507D05 gene
mm9_v1_chr12_-_112127299_112127357	2.19931	RFX1..5_RFXANK_RFXAP.p2	BC021867|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK004355|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK076126|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK160662|Cinp|67236|cyclin-dependent kinase 2 interacting protein	NM_026048|Cinp|67236|cyclin-dependent kinase 2 interacting protein	BC011066|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK007812|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK032155|Cinp|67236|cyclin-dependent kinase 2 interacting protein
mm9_v1_chr17_+_34093007_34093064	2.18209	RFX1..5_RFXANK_RFXAP.p2	AX775735|Vps52|224705|vacuolar protein sorting 52 (yeast)
mm9_v1_chr1_+_37356745_37356791	2.17288	RFX1..5_RFXANK_RFXAP.p2	AK089671|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	AK149414|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr7_+_28964486_28964515	2.12907	RFX1..5_RFXANK_RFXAP.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr10_-_79229589_79229691	2.11684	RFX1..5_RFXANK_RFXAP.p2	AK154781|Rnf126|70294|ring finger protein 126	NM_144528|Rnf126|70294|ring finger protein 126	BC016543|Rnf126|70294|ring finger protein 126	AK042319|Rnf126|70294|ring finger protein 126
mm9_v1_chr5_-_143656864_143656886	2.08998	RFX1..5_RFXANK_RFXAP.p2	AK049302|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr10_+_79132113_79132186	2.03734	RFX1..5_RFXANK_RFXAP.p2	BC138515|Gm16517|110012|predicted gene, Gm16517	BC138516|Gm16517|110012|predicted gene, Gm16517	AF303106|Gm16517|110012|predicted gene, Gm16517	NM_148934|Gm16517|110012|predicted gene, Gm16517
mm9_v1_chr13_+_22036962_22036998	2.0355	RFX1..5_RFXANK_RFXAP.p2	BC053084|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	NM_183014|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	AK036164|Zfp184|193452|zinc finger protein 184 (Kruppel-like)
mm9_v1_chr9_-_83334633_83334733	2.01346	RFX1..5_RFXANK_RFXAP.p2	BC049101|Lca5|75782|Leber congenital amaurosis 5 (human)	BC052060|Lca5|75782|Leber congenital amaurosis 5 (human)	AK047956|Lca5|75782|Leber congenital amaurosis 5 (human)	AK015260|Lca5|75782|Leber congenital amaurosis 5 (human)	AK039510|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_027448|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_029434|Lca5|75782|Leber congenital amaurosis 5 (human)
mm9_v1_chr1_+_24685377_24685468	1.99864	RFX1..5_RFXANK_RFXAP.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr5_-_115750940_115750978	1.978	RFX1..5_RFXANK_RFXAP.p2	AK002522|Dynll1|56455|dynein light chain LC8-type 1	AK010614|Dynll1|56455|dynein light chain LC8-type 1	AK010685|Dynll1|56455|dynein light chain LC8-type 1	AK013721|Dynll1|56455|dynein light chain LC8-type 1	AK013725|Dynll1|56455|dynein light chain LC8-type 1	AK082923|Dynll1|56455|dynein light chain LC8-type 1	AK147977|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr6_-_83075022_83075189	1.96865	RFX1..5_RFXANK_RFXAP.p2	NM_023547|Ino80b|70020|INO80 complex subunit B	BC019383|Ino80b|70020|INO80 complex subunit B	BC047990|Ino80b|70020|INO80 complex subunit B	BC058788|Ino80b|70020|INO80 complex subunit B	AK010946|Ino80b|70020|INO80 complex subunit B
mm9_v1_chr17_-_35840931_35841083	1.967	RFX1..5_RFXANK_RFXAP.p2	L57509|Ddr1|12305|discoidin domain receptor family, member 1	AK143088|Ddr1|12305|discoidin domain receptor family, member 1	AK031442|Ddr1|12305|discoidin domain receptor family, member 1	NM_007584|Ddr1|12305|discoidin domain receptor family, member 1	NM_172962|Ddr1|12305|discoidin domain receptor family, member 1
mm9_v1_chr4_+_56815193_56815243	1.96402	RFX1..5_RFXANK_RFXAP.p2	NM_001081420|BC026590|230234|cDNA sequence BC026590	AK043588|BC026590|230234|cDNA sequence BC026590	BC026590|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr1_+_37356722_37356738	1.95391	RFX1..5_RFXANK_RFXAP.p2	AK162581|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_030266|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr8_+_28153013_28153055	1.95068	RFX1..5_RFXANK_RFXAP.p2	NM_001039077|Prosc|114863|proline synthetase co-transcribed	NM_001039078|Prosc|114863|proline synthetase co-transcribed	NM_054057|Prosc|114863|proline synthetase co-transcribed	BC061045|Prosc|114863|proline synthetase co-transcribed	AK147670|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr9_-_79641213_79641236	1.93763	RFX1..5_RFXANK_RFXAP.p2	AK077065|Tmem30a|69981|transmembrane protein 30A	NM_133718|Tmem30a|69981|transmembrane protein 30A
mm9_v1_chr7_-_133939596_133939677	1.93647	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr12_-_105101768_105101807	1.91118	RFX1..5_RFXANK_RFXAP.p2	BC057984|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr8_-_96958065_96958186	1.90963	RFX1..5_RFXANK_RFXAP.p2	AK080381|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene	AK034303|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene
mm9_v1_chr13_+_59686693_59686787	1.90598	RFX1..5_RFXANK_RFXAP.p2	NM_030153|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC027201|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	AY102701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC043701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC056435|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr11_+_101140325_101140516	1.8863	RFX1..5_RFXANK_RFXAP.p2	AK006754|Cntd1|68107|cyclin N-terminal domain containing 1	AK049116|Cntd1|68107|cyclin N-terminal domain containing 1	BC006866|Cntd1|68107|cyclin N-terminal domain containing 1	AK007245|Cntd1|68107|cyclin N-terminal domain containing 1	NM_026562|Cntd1|68107|cyclin N-terminal domain containing 1
mm9_v1_chr3_+_106524842_106524867	1.87323	RFX1..5_RFXANK_RFXAP.p2	AK156488|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK008209|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK141379|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117763|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117764|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK048030|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC094643|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr8_+_72839642_72839751	1.8728	RFX1..5_RFXANK_RFXAP.p2	AK053885|Lass1|93898|LAG1 homolog, ceramide synthase 1	NM_001163282|Gdf1|14559|growth differentiation factor 1	NM_138647|Lass1|93898|LAG1 homolog, ceramide synthase 1	M62301|Gdf1|14559|growth differentiation factor 1	AK162823|Gdf1|14559|growth differentiation factor 1	BC056973|Gdf1|14559|growth differentiation factor 1	BC094351|Gdf1|14559|growth differentiation factor 1	BC132318|Lass1|93898|LAG1 homolog, ceramide synthase 1
mm9_v1_chr10_-_6979959_6980009	1.87189	RFX1..5_RFXANK_RFXAP.p2	BC055717|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr17_+_34781733_34781827	1.86185	RFX1..5_RFXANK_RFXAP.p2	AK146018|Fkbpl|56299|FK506 binding protein-like	BC046338|Fkbpl|56299|FK506 binding protein-like	NM_019873|Fkbpl|56299|FK506 binding protein-like
mm9_v1_chr7_+_17323737_17323870	1.84136	RFX1..5_RFXANK_RFXAP.p2	AK146584|Ap2s1|232910|adaptor-related protein complex 2, sigma 1 subunit	NM_198613|Ap2s1|232910|adaptor-related protein complex 2, sigma 1 subunit	BC052499|Ap2s1|232910|adaptor-related protein complex 2, sigma 1 subunit
mm9_v1_chr17_+_72022598_72022608	1.84049	RFX1..5_RFXANK_RFXAP.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr7_+_116895582_116895839	1.83429	RFX1..5_RFXANK_RFXAP.p2	AK015280|4930431P19Rik|73886|RIKEN cDNA 4930431P19 gene	AK031634|4930431P19Rik|73886|RIKEN cDNA 4930431P19 gene	AK050574|4930431P19Rik|73886|RIKEN cDNA 4930431P19 gene
mm9_v1_chr4_+_77857988_77858006	1.82277	RFX1..5_RFXANK_RFXAP.p2	AK043640|B230208B08Rik|319499|RIKEN cDNA B230208B08 gene
mm9_v1_chr12_+_72149332_72149349	1.82184	RFX1..5_RFXANK_RFXAP.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr9_+_72833327_72833369	1.78688	RFX1..5_RFXANK_RFXAP.p2	NM_001114328|Ccpg1|72278|cell cycle progression 1	NM_028181|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr9_-_110379093_110379197	1.78517	RFX1..5_RFXANK_RFXAP.p2	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr1_+_92499999_92500134	1.78011	RFX1..5_RFXANK_RFXAP.p2	NM_133805|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC021488|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK142989|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079522|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC024421|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079111|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK162502|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK090013|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK145899|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK088323|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr17_-_24135049_24135066	1.7512	RFX1..5_RFXANK_RFXAP.p2	AB010778|Prss22|70835|protease, serine, 22	BC055854|Prss22|70835|protease, serine, 22	AK014645|Prss22|70835|protease, serine, 22	NM_133731|Prss22|70835|protease, serine, 22
mm9_v1_chr16_+_90221044_90221098	1.73898	RFX1..5_RFXANK_RFXAP.p2	BC002066|Sod1|20655|superoxide dismutase 1, soluble	AK077284|Sod1|20655|superoxide dismutase 1, soluble	AK020624|Sod1|20655|superoxide dismutase 1, soluble	M35725|Sod1|20655|superoxide dismutase 1, soluble	X06683|Sod1|20655|superoxide dismutase 1, soluble
mm9_v1_chr7_+_89797101_89797158	1.73237	RFX1..5_RFXANK_RFXAP.p2	NM_001159672|Eftud1|101592|elongation factor Tu GTP binding domain containing 1	NM_175317|Eftud1|101592|elongation factor Tu GTP binding domain containing 1	AK031647|Eftud1|101592|elongation factor Tu GTP binding domain containing 1	AK049698|Eftud1|101592|elongation factor Tu GTP binding domain containing 1	BC045616|Eftud1|101592|elongation factor Tu GTP binding domain containing 1	AK028676|Eftud1|101592|elongation factor Tu GTP binding domain containing 1
mm9_v1_chr11_-_77538789_77538794	1.72192	RFX1..5_RFXANK_RFXAP.p2	AJ239052|Cryba1|12957|crystallin, beta A1	BC107342|Cryba1|12957|crystallin, beta A1	NM_009965|Cryba1|12957|crystallin, beta A1
mm9_v1_chr4_-_144028600_144028674	1.72088	RFX1..5_RFXANK_RFXAP.p2	BC116372|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	BC126971|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	AK005933|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	BC099569|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	NM_027056|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene
mm9_v1_chr14_-_57397125_57397185	1.69014	RFX1..5_RFXANK_RFXAP.p2	BC026772|Pspc1|66645|paraspeckle protein 1	AK011272|Pspc1|66645|paraspeckle protein 1	AK017689|Pspc1|66645|paraspeckle protein 1	AK150823|Pspc1|66645|paraspeckle protein 1	AK160722|Pspc1|66645|paraspeckle protein 1	NM_025682|Pspc1|66645|paraspeckle protein 1
mm9_v1_chr9_+_20970150_20970317	1.68612	RFX1..5_RFXANK_RFXAP.p2	AK153657|Pde4a|18577|phosphodiesterase 4A, cAMP specific	NM_183408|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139405|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139408|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr9_-_106350001_106350018	1.67722	RFX1..5_RFXANK_RFXAP.p2	NM_001110271|Abhd14a|68644|abhydrolase domain containing 14A	NM_001110272|Abhd14a|68644|abhydrolase domain containing 14A	NM_145919|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr9_+_123836859_123837183	1.64817	RFX1..5_RFXANK_RFXAP.p2	NM_009878|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK132906|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK144737|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U19597|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	BC013898|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U20497|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK140808|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm9_v1_chr18_-_70689871_70689891	1.64722	RFX1..5_RFXANK_RFXAP.p2	AY515316|Poli|26447|polymerase (DNA directed), iota	AY515317|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr12_-_66066481_66066522	1.64226	RFX1..5_RFXANK_RFXAP.p2	BC018469|Klhl28|66689|kelch-like 28 (Drosophila)	BC037017|Klhl28|66689|kelch-like 28 (Drosophila)	AK002637|Klhl28|66689|kelch-like 28 (Drosophila)	AK013278|Klhl28|66689|kelch-like 28 (Drosophila)	AK012778|Klhl28|66689|kelch-like 28 (Drosophila)	AK014466|Klhl28|66689|kelch-like 28 (Drosophila)	NM_025707|Klhl28|66689|kelch-like 28 (Drosophila)
mm9_v1_chr15_+_100592177_100592343	1.61268	RFX1..5_RFXANK_RFXAP.p2	AK034237|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	NM_021530|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK083945|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK050563|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK039404|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	BC030388|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AF224508|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK173014|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8
mm9_v1_chrX_+_70362385_70362385	1.60411	RFX1..5_RFXANK_RFXAP.p2	AK005439|DXBay18|574405|DNA segment, Chr X, Baylor 18	NM_001025384|DXBay18|574405|DNA segment, Chr X, Baylor 18
mm9_v1_chrX_-_147451785_147451868	1.59468	RFX1..5_RFXANK_RFXAP.p2	BC079653|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC057033|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC020354|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_001168600|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_198110|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like
mm9_v1_chr11_-_45768992_45769003	1.57627	RFX1..5_RFXANK_RFXAP.p2	BC115560|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC115561|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK010876|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_001080969|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chrX_-_146875621_146875705	1.56633	RFX1..5_RFXANK_RFXAP.p2	BC058428|Tmem29|382245|transmembrane protein 29	AK018228|Tmem29|382245|transmembrane protein 29	NM_001164684|Tmem29|382245|transmembrane protein 29	AK165152|Tmem29|382245|transmembrane protein 29
mm9_v1_chr5_+_35104373_35104397	1.56187	RFX1..5_RFXANK_RFXAP.p2	AK042204|Htt|15194|huntingtin	NM_010414|Htt|15194|huntingtin
mm9_v1_chr17_+_25257704_25257721	1.55583	RFX1..5_RFXANK_RFXAP.p2	NM_001163416|Ptx4|68509|pentraxin 4	NM_026747|Ptx4|68509|pentraxin 4	BC107380|Ptx4|68509|pentraxin 4	BC107381|Ptx4|68509|pentraxin 4	BC115902|Ptx4|68509|pentraxin 4	BC118508|Ptx4|68509|pentraxin 4
mm9_v1_chr17_-_25998327_25998452	1.5486	RFX1..5_RFXANK_RFXAP.p2	AK129465|Wdr90|106618|WD repeat domain 90	AK154827|Wdr90|106618|WD repeat domain 90	AK036541|Wdr90|106618|WD repeat domain 90	AK170906|Wdr90|106618|WD repeat domain 90
mm9_v1_chrX_+_43682183_43682208	1.54695	RFX1..5_RFXANK_RFXAP.p2	AK006855|Actrt1|73360|actin-related protein T1	NM_028514|Actrt1|73360|actin-related protein T1	BC116431|Actrt1|73360|actin-related protein T1	BC116432|Actrt1|73360|actin-related protein T1
mm9_v1_chr7_+_17401610_17401709	1.54679	RFX1..5_RFXANK_RFXAP.p2	AK161673|Strn4|97387|striatin, calmodulin binding protein 4	BC080283|Strn4|97387|striatin, calmodulin binding protein 4	AK154615|Strn4|97387|striatin, calmodulin binding protein 4
mm9_v1_chr5_-_93104121_93104296	1.53804	RFX1..5_RFXANK_RFXAP.p2	BC137976|Ccdc158|320696|coiled-coil domain containing 158	BC145072|Ccdc158|320696|coiled-coil domain containing 158	AK029997|Ccdc158|320696|coiled-coil domain containing 158	NM_177230|Ccdc158|320696|coiled-coil domain containing 158	AK160895|Ccdc158|320696|coiled-coil domain containing 158	AK076225|Ccdc158|320696|coiled-coil domain containing 158
mm9_v1_chr6_-_39675456_39675512	1.51663	RFX1..5_RFXANK_RFXAP.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr6_-_35489703_35489856	1.5164	RFX1..5_RFXANK_RFXAP.p2	AK151106|Mtpn|14489|myotrophin	AK151147|Mtpn|14489|myotrophin	AK151564|Mtpn|14489|myotrophin	AK152317|Mtpn|14489|myotrophin	AK151687|Mtpn|14489|myotrophin	AK152272|Mtpn|14489|myotrophin	BC043084|Mtpn|14489|myotrophin	AK049398|Mtpn|14489|myotrophin	AK146473|Mtpn|14489|myotrophin	AK145755|Mtpn|14489|myotrophin	D78188|Mtpn|14489|myotrophin	AK002620|Mtpn|14489|myotrophin	AK083888|Mtpn|14489|myotrophin	BC054811|Mtpn|14489|myotrophin	AK150750|Mtpn|14489|myotrophin	AK132029|Mtpn|14489|myotrophin	AK151640|Mtpn|14489|myotrophin	AK151485|Mtpn|14489|myotrophin	AK028027|Mtpn|14489|myotrophin	U20290|Mtpn|14489|myotrophin	AK146305|Mtpn|14489|myotrophin
mm9_v1_chr5_+_137169015_137169047	1.50606	RFX1..5_RFXANK_RFXAP.p2	NM_021611|Myl10|59310|myosin, light chain 10, regulatory	X65981|Myl10|59310|myosin, light chain 10, regulatory	BC125528|Myl10|59310|myosin, light chain 10, regulatory
mm9_v1_chr16_-_85173978_85173998	1.49681	RFX1..5_RFXANK_RFXAP.p2	AK147543|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr7_-_88046106_88046156	1.46701	RFX1..5_RFXANK_RFXAP.p2	BC028870|Wdr73|71968|WD repeat domain 73	BC068122|Wdr73|71968|WD repeat domain 73	BC087940|Wdr73|71968|WD repeat domain 73	AK034740|Wdr73|71968|WD repeat domain 73	AK169377|Wdr73|71968|WD repeat domain 73	AK004708|Wdr73|71968|WD repeat domain 73	AK010448|Wdr73|71968|WD repeat domain 73	AK220207|Wdr73|71968|WD repeat domain 73	AK049132|Wdr73|71968|WD repeat domain 73	AK169527|Wdr73|71968|WD repeat domain 73	NM_028026|Wdr73|71968|WD repeat domain 73
mm9_v1_chr1_+_31279683_31279691	1.45956	RFX1..5_RFXANK_RFXAP.p2	AK015858|4930521A18Rik|74708|RIKEN cDNA 4930521A18 gene	NM_029062|4930521A18Rik|74708|RIKEN cDNA 4930521A18 gene	BC107262|4930521A18Rik|74708|RIKEN cDNA 4930521A18 gene
mm9_v1_chr5_+_151476361_151476427	1.45824	RFX1..5_RFXANK_RFXAP.p2	AY102267|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	NM_175310|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm9_v1_chr5_-_123979739_123979846	1.44197	RFX1..5_RFXANK_RFXAP.p2	AK080345|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr7_-_112788821_112788929	1.40865	RFX1..5_RFXANK_RFXAP.p2	BC028310|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC013794|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC022942|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK009100|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK154772|Arfip2|76932|ADP-ribosylation factor interacting protein 2	NM_029802|Arfip2|76932|ADP-ribosylation factor interacting protein 2
mm9_v1_chrX_+_75614981_75614981	1.40537	RFX1..5_RFXANK_RFXAP.p2	AK015598|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116859|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116861|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	NM_001177966|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene
mm9_v1_chrX_-_49034524_49034544	1.40366	RFX1..5_RFXANK_RFXAP.p2	AK031649|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr11_-_100481438_100481481	1.40262	RFX1..5_RFXANK_RFXAP.p2	BC055729|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_019795|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7
mm9_v1_chr7_+_28964518_28964559	1.35906	RFX1..5_RFXANK_RFXAP.p2	AK148342|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr18_-_70689894_70689974	1.34205	RFX1..5_RFXANK_RFXAP.p2	AK145244|Poli|26447|polymerase (DNA directed), iota	AK154537|Poli|26447|polymerase (DNA directed), iota	BC057575|Poli|26447|polymerase (DNA directed), iota	AK163784|Poli|26447|polymerase (DNA directed), iota	AF151691|Poli|26447|polymerase (DNA directed), iota	NM_011972|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr19_+_45438212_45438344	1.33977	RFX1..5_RFXANK_RFXAP.p2	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chr11_-_100480893_100481114	1.33174	RFX1..5_RFXANK_RFXAP.p2	AY323828|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AB028861|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AK011875|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AK145506|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AK145739|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AK166872|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	AK076032|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7	BC023681|Dnajc7|56354|DnaJ (Hsp40) homolog, subfamily C, member 7
mm9_v1_chr1_+_180336011_180336163	1.33144	RFX1..5_RFXANK_RFXAP.p2	BC025062|Efcab2|68226|EF-hand calcium binding domain 2	NM_026626|Efcab2|68226|EF-hand calcium binding domain 2	AK018894|Efcab2|68226|EF-hand calcium binding domain 2	AK010880|Efcab2|68226|EF-hand calcium binding domain 2
mm9_v1_chr8_+_97835414_97835512	1.31192	RFX1..5_RFXANK_RFXAP.p2	NM_199455|Tepp|73407|testis, prostate and placenta expressed	BC104382|Tepp|73407|testis, prostate and placenta expressed	BC104383|Tepp|73407|testis, prostate and placenta expressed	BC087870|Tepp|73407|testis, prostate and placenta expressed	AK006802|Tepp|73407|testis, prostate and placenta expressed	NM_028532|Tepp|73407|testis, prostate and placenta expressed
mm9_v1_chr14_+_69789858_69790075	1.30572	RFX1..5_RFXANK_RFXAP.p2	AF045150|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC132558|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC139035|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK006401|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC100425|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AF030113|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK007304|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	NM_010920|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)
mm9_v1_chrX_-_34708836_34708836	1.30495	RFX1..5_RFXANK_RFXAP.p2	AK133120|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147265|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147494|Akap14|434756|A kinase (PRKA) anchor protein 14	NM_001033785|Akap14|434756|A kinase (PRKA) anchor protein 14
mm9_v1_chr17_+_34766489_34766633	1.29127	RFX1..5_RFXANK_RFXAP.p2	BC128489|Prrt1|260297|proline-rich transmembrane protein 1	NM_030890|Prrt1|260297|proline-rich transmembrane protein 1	BC115512|Prrt1|260297|proline-rich transmembrane protein 1	BC115513|Prrt1|260297|proline-rich transmembrane protein 1
mm9_v1_chr19_-_3282905_3283048	1.2856	RFX1..5_RFXANK_RFXAP.p2	L10075|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC066215|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK153763|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC052025|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC060085|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK154805|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK155899|Ighmbp2|20589|immunoglobulin mu binding protein 2	NM_009212|Ighmbp2|20589|immunoglobulin mu binding protein 2
mm9_v1_chr9_+_45820886_45820906	1.27479	RFX1..5_RFXANK_RFXAP.p2	NM_027498|Sik3|70661|SIK family kinase 3
mm9_v1_chr11_-_31724523_31724546	1.26516	RFX1..5_RFXANK_RFXAP.p2	AK085420|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158233|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158188|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene
mm9_v1_chr10_+_75356142_75356192	1.26445	RFX1..5_RFXANK_RFXAP.p2	AB047555|Derl3|70377|Der1-like domain family, member 3	NM_024440|Derl3|70377|Der1-like domain family, member 3	BC115466|Derl3|70377|Der1-like domain family, member 3	BC115467|Derl3|70377|Der1-like domain family, member 3	AK172429|Derl3|70377|Der1-like domain family, member 3	BC099615|Derl3|70377|Der1-like domain family, member 3	AK007348|Derl3|70377|Der1-like domain family, member 3	AK007948|Derl3|70377|Der1-like domain family, member 3	BC019815|Derl3|70377|Der1-like domain family, member 3	BC004729|Derl3|70377|Der1-like domain family, member 3
mm9_v1_chr1_+_137914635_137914732	1.26086	RFX1..5_RFXANK_RFXAP.p2	NM_001160146|Tmem9|66241|transmembrane protein 9
mm9_v1_chr9_-_97270363_97270376	1.25364	RFX1..5_RFXANK_RFXAP.p2	BC111825|Trim42|78911|tripartite motif-containing 42	AK019654|Trim42|78911|tripartite motif-containing 42	NM_030219|Trim42|78911|tripartite motif-containing 42
mm9_v1_chr16_+_11203475_11203482	1.24762	RFX1..5_RFXANK_RFXAP.p2	AK029005|2610020C07Rik|69918|RIKEN cDNA 2610020C07 gene	AK011479|2610020C07Rik|69918|RIKEN cDNA 2610020C07 gene
mm9_v1_chr12_-_105101743_105101767	1.2222	RFX1..5_RFXANK_RFXAP.p2	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr2_+_58999028_58999140	1.22139	RFX1..5_RFXANK_RFXAP.p2	BC079848|Pkp4|227937|plakophilin 4	BC082578|Pkp4|227937|plakophilin 4	BC042746|Pkp4|227937|plakophilin 4
mm9_v1_chr18_+_67624517_67624527	1.21879	RFX1..5_RFXANK_RFXAP.p2	AK143220|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr8_+_35178083_35178147	1.18817	RFX1..5_RFXANK_RFXAP.p2	EU721729|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	NM_001126314|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147844|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147849|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	EU518496|Mboat4|234155|membrane bound O-acyltransferase domain containing 4
mm9_v1_chr7_+_19735155_19735219	1.18437	RFX1..5_RFXANK_RFXAP.p2	BC043014|Snrpd2|107686|small nuclear ribonucleoprotein D2	NM_026943|Snrpd2|107686|small nuclear ribonucleoprotein D2	BC116858|Snrpd2|107686|small nuclear ribonucleoprotein D2	BC116860|Snrpd2|107686|small nuclear ribonucleoprotein D2	AK007389|Snrpd2|107686|small nuclear ribonucleoprotein D2	AK088105|Snrpd2|107686|small nuclear ribonucleoprotein D2	AK045968|Snrpd2|107686|small nuclear ribonucleoprotein D2	BC051208|Snrpd2|107686|small nuclear ribonucleoprotein D2
mm9_v1_chr10_-_75130331_75130381	1.18145	RFX1..5_RFXANK_RFXAP.p2	AK169961|Cabin1|104248|calcineurin binding protein 1	AK171567|Cabin1|104248|calcineurin binding protein 1
mm9_v1_chr12_-_32319353_32319551	1.17949	RFX1..5_RFXANK_RFXAP.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr7_+_50834955_50835126	1.13123	RFX1..5_RFXANK_RFXAP.p2	NM_172482|Zfp719|210105|zinc finger protein 719	AK044684|Zfp719|210105|zinc finger protein 719	BC081548|Zfp719|210105|zinc finger protein 719	AK083143|Zfp719|210105|zinc finger protein 719	AK020523|Zfp719|210105|zinc finger protein 719
mm9_v1_chrX_-_70394788_70394788	1.12875	RFX1..5_RFXANK_RFXAP.p2	AK005439|DXBay18|574405|DNA segment, Chr X, Baylor 18	NM_001025384|DXBay18|574405|DNA segment, Chr X, Baylor 18
mm9_v1_chr11_-_102878371_102878504	1.09329	RFX1..5_RFXANK_RFXAP.p2	AK078460|Dcakd|68087|dephospho-CoA kinase domain containing	BC031855|Dcakd|68087|dephospho-CoA kinase domain containing	AK170762|Dcakd|68087|dephospho-CoA kinase domain containing	BC045193|Dcakd|68087|dephospho-CoA kinase domain containing	AK162069|Dcakd|68087|dephospho-CoA kinase domain containing	BC005607|Dcakd|68087|dephospho-CoA kinase domain containing	AK051022|Dcakd|68087|dephospho-CoA kinase domain containing	NM_026551|Dcakd|68087|dephospho-CoA kinase domain containing
mm9_v1_chr8_+_72356545_72356674	1.08962	RFX1..5_RFXANK_RFXAP.p2	AK076968|Pbx4|80720|pre-B-cell leukemia homeobox 4	AK010506|Pbx4|80720|pre-B-cell leukemia homeobox 4	AK038786|Pbx4|80720|pre-B-cell leukemia homeobox 4	BC032875|Pbx4|80720|pre-B-cell leukemia homeobox 4	AJ300184|Pbx4|80720|pre-B-cell leukemia homeobox 4	NM_001024954|Pbx4|80720|pre-B-cell leukemia homeobox 4	AJ300183|Pbx4|80720|pre-B-cell leukemia homeobox 4
mm9_v1_chr9_-_62659364_62659454	1.07793	RFX1..5_RFXANK_RFXAP.p2	AB022863|Fem1b|14155|feminization 1 homolog b (C. elegans)	BC068236|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK149329|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK032338|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK132692|Fem1b|14155|feminization 1 homolog b (C. elegans)	NM_010193|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr11_-_101285951_101285970	1.07754	RFX1..5_RFXANK_RFXAP.p2	BC057970|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	AK004415|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr7_+_4734541_4734552	1.06271	RFX1..5_RFXANK_RFXAP.p2	NM_030028|Tmem190|78052|transmembrane protein 190	AK019807|Tmem190|78052|transmembrane protein 190
mm9_v1_chr2_-_51790671_51790711	1.02241	RFX1..5_RFXANK_RFXAP.p2	AK002739|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr19_-_10630215_10630267	1.01788	RFX1..5_RFXANK_RFXAP.p2	BC052053|Tmem216|68642|transmembrane protein 216	AK080725|Tmem216|68642|transmembrane protein 216	AK013286|Tmem216|68642|transmembrane protein 216
mm9_v1_chr5_+_138613248_138613363	1.01654	RFX1..5_RFXANK_RFXAP.p2	AK031638|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	NM_021392|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	AK165187|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	BC011174|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1
mm9_v1_chr10_-_77472501_77472567	1.01439	RFX1..5_RFXANK_RFXAP.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr12_+_85702917_85702967	1.01407	RFX1..5_RFXANK_RFXAP.p2	BC132168|Coq6|217707|coenzyme Q6 homolog (yeast)	BC132170|Coq6|217707|coenzyme Q6 homolog (yeast)	NM_172582|Coq6|217707|coenzyme Q6 homolog (yeast)	BC088736|Coq6|217707|coenzyme Q6 homolog (yeast)	AK131889|Coq6|217707|coenzyme Q6 homolog (yeast)
mm9_v1_chr10_+_79132224_79132234	1.01407	RFX1..5_RFXANK_RFXAP.p2	AK153467|Gm16517|110012|predicted gene, Gm16517
mm9_v1_chr17_+_85356080_85356080	1.01144	RFX1..5_RFXANK_RFXAP.p2	AK076923|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	NM_001159497|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform
mm9_v1_chr10_-_76721815_76721967	0.995304	RFX1..5_RFXANK_RFXAP.p2	AK164976|Gm10941|100169878|predicted gene 10941	AK132904|Gm10941|100169878|predicted gene 10941
mm9_v1_chr8_+_35217677_35217684	0.983782	RFX1..5_RFXANK_RFXAP.p2	BC024888|Tmem66|67887|transmembrane protein 66	AK163218|Tmem66|67887|transmembrane protein 66
mm9_v1_chr9_+_45820921_45821106	0.983305	RFX1..5_RFXANK_RFXAP.p2	BC080688|Sik3|70661|SIK family kinase 3	BC063268|Sik3|70661|SIK family kinase 3
mm9_v1_chr17_+_57014905_57015055	0.977289	RFX1..5_RFXANK_RFXAP.p2	AK028078|1700061G19Rik|78625|RIKEN cDNA 1700061G19 gene	AK018867|1700061G19Rik|78625|RIKEN cDNA 1700061G19 gene	BC116283|1700061G19Rik|78625|RIKEN cDNA 1700061G19 gene	NM_030141|1700061G19Rik|78625|RIKEN cDNA 1700061G19 gene
mm9_v1_chr7_-_52003986_52003986	0.97284	RFX1..5_RFXANK_RFXAP.p2	AK030093|Zfp473|243963|zinc finger protein 473	NM_178734|Zfp473|243963|zinc finger protein 473
mm9_v1_chr10_+_80532812_80532901	0.968872	RFX1..5_RFXANK_RFXAP.p2	NM_022653|Thop1|50492|thimet oligopeptidase 1	BC031722|Thop1|50492|thimet oligopeptidase 1	BC003211|Thop1|50492|thimet oligopeptidase 1	AF314187|Thop1|50492|thimet oligopeptidase 1	AK028609|Thop1|50492|thimet oligopeptidase 1
mm9_v1_chr11_-_62545374_62545408	0.966577	RFX1..5_RFXANK_RFXAP.p2	AK133603|Zfp287|170740|zinc finger protein 287	AK046006|Zfp287|170740|zinc finger protein 287
mm9_v1_chr16_-_96303958_96304070	0.930845	RFX1..5_RFXANK_RFXAP.p2	BC095940|Brwd1|93871|bromodomain and WD repeat domain containing 1	BC145265|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292467|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292468|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK030493|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_001103179|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_145125|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_176928|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK051870|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr17_-_25998459_25998461	0.922807	RFX1..5_RFXANK_RFXAP.p2	NM_001163766|Wdr90|106618|WD repeat domain 90
mm9_v1_chr12_-_102137614_102137733	0.910521	RFX1..5_RFXANK_RFXAP.p2	AK154292|Gm10431|100038679|predicted gene 10431	NM_001177674|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr7_+_108469591_108469658	0.906275	RFX1..5_RFXANK_RFXAP.p2	BC080808|Stard10|56018|START domain containing 10
mm9_v1_chr6_-_145383444_145383444	0.880333	RFX1..5_RFXANK_RFXAP.p2	AK016641|Ifltd1|74071|intermediate filament tail domain containing 1	NM_028742|Ifltd1|74071|intermediate filament tail domain containing 1
mm9_v1_chr12_+_53800302_53800317	0.877247	RFX1..5_RFXANK_RFXAP.p2	DQ233645|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr4_-_40995030_40995168	0.872896	RFX1..5_RFXANK_RFXAP.p2	AB010100|Aqp7|11832|aquaporin 7	AK076642|Aqp7|11832|aquaporin 7	AK131744|Aqp7|11832|aquaporin 7	NM_007473|Aqp7|11832|aquaporin 7
mm9_v1_chr10_-_80630518_80630667	0.865637	RFX1..5_RFXANK_RFXAP.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr14_-_122138082_122138150	0.854344	RFX1..5_RFXANK_RFXAP.p2	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr12_-_105101825_105101829	0.81999	RFX1..5_RFXANK_RFXAP.p2	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr1_+_6720087_6720131	0.818006	RFX1..5_RFXANK_RFXAP.p2	AB097467|St18|240690|suppression of tumorigenicity 18	AJ536155|St18|240690|suppression of tumorigenicity 18	AK032557|St18|240690|suppression of tumorigenicity 18	NM_173868|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr19_-_6077175_6077225	0.816083	RFX1..5_RFXANK_RFXAP.p2	BC051479|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	NM_001081041|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	AK137155|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	AK146211|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	AK014229|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	BC118930|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	BC118931|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene	BC034452|1110014N23Rik|68505|RIKEN cDNA 1110014N23 gene
mm9_v1_chr16_+_44347501_44347594	0.813317	RFX1..5_RFXANK_RFXAP.p2	NM_144550|Spice1|212514|spindle and centriole associated protein 1	AK165031|Spice1|212514|spindle and centriole associated protein 1	BC052381|Spice1|212514|spindle and centriole associated protein 1	BC056960|Spice1|212514|spindle and centriole associated protein 1	AK048789|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr12_+_85702978_85703016	0.811505	RFX1..5_RFXANK_RFXAP.p2	BC106183|Coq6|217707|coenzyme Q6 homolog (yeast)	AK167380|Coq6|217707|coenzyme Q6 homolog (yeast)	AK170311|Coq6|217707|coenzyme Q6 homolog (yeast)	AK077863|Coq6|217707|coenzyme Q6 homolog (yeast)	BC051055|Coq6|217707|coenzyme Q6 homolog (yeast)	BC024135|Coq6|217707|coenzyme Q6 homolog (yeast)
mm9_v1_chrX_+_98728073_98728189	0.808896	RFX1..5_RFXANK_RFXAP.p2	AK045586|Taf1|270627|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001081008|Taf1|270627|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK143571|Taf1|270627|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AB299229|Taf1|270627|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr9_+_21807437_21807509	0.801643	RFX1..5_RFXANK_RFXAP.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chrX_+_70394179_70394179	0.786242	RFX1..5_RFXANK_RFXAP.p2	NM_001111293|Xlr5b|627081|X-linked lymphocyte-regulated 5B
mm9_v1_chr3_+_144781551_144781583	0.785674	RFX1..5_RFXANK_RFXAP.p2	AK036206|Odf2l|52184|outer dense fiber of sperm tails 2-like	AK031564|Odf2l|52184|outer dense fiber of sperm tails 2-like	NM_001162538|Odf2l|52184|outer dense fiber of sperm tails 2-like	NM_001162539|Odf2l|52184|outer dense fiber of sperm tails 2-like	AK014630|Odf2l|52184|outer dense fiber of sperm tails 2-like	AK085115|Odf2l|52184|outer dense fiber of sperm tails 2-like	NM_025714|Odf2l|52184|outer dense fiber of sperm tails 2-like	AK016726|Odf2l|52184|outer dense fiber of sperm tails 2-like	AK048931|Odf2l|52184|outer dense fiber of sperm tails 2-like	BC020075|Odf2l|52184|outer dense fiber of sperm tails 2-like
mm9_v1_chr1_-_37921651_37921692	0.785005	RFX1..5_RFXANK_RFXAP.p2	AK170053|Tsga10|211484|testis specific 10
mm9_v1_chr3_+_106487904_106487904	0.770317	RFX1..5_RFXANK_RFXAP.p2	NM_001039478|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr17_+_35153523_35153582	0.755204	RFX1..5_RFXANK_RFXAP.p2	AF134319|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	NM_138582|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	BC137792|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	BC144911|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3
mm9_v1_chr2_+_32092104_32092162	0.75085	RFX1..5_RFXANK_RFXAP.p2	AK153984|Pomt1|99011|protein-O-mannosyltransferase 1	AK050680|Pomt1|99011|protein-O-mannosyltransferase 1	AY494857|Pomt1|99011|protein-O-mannosyltransferase 1	AK134770|Pomt1|99011|protein-O-mannosyltransferase 1	AY007238|Pomt1|99011|protein-O-mannosyltransferase 1
mm9_v1_chr2_+_25188246_25188306	0.739326	RFX1..5_RFXANK_RFXAP.p2	NM_001029983|Man1b1|227619|mannosidase, alpha, class 1B, member 1	AK043541|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138550|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138551|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr19_-_5295389_5295474	0.736392	RFX1..5_RFXANK_RFXAP.p2	BC029745|Sf3b2|319322|splicing factor 3b, subunit 2	AK151354|Sf3b2|319322|splicing factor 3b, subunit 2	AK019282|Sf3b2|319322|splicing factor 3b, subunit 2	AK152965|Sf3b2|319322|splicing factor 3b, subunit 2	AK012009|Sf3b2|319322|splicing factor 3b, subunit 2	AK150961|Sf3b2|319322|splicing factor 3b, subunit 2	AK159893|Sf3b2|319322|splicing factor 3b, subunit 2	AK011613|Sf3b2|319322|splicing factor 3b, subunit 2	BC045207|Sf3b2|319322|splicing factor 3b, subunit 2	AK146540|Sf3b2|319322|splicing factor 3b, subunit 2	AK152327|Sf3b2|319322|splicing factor 3b, subunit 2	AK146864|Sf3b2|319322|splicing factor 3b, subunit 2	AK147687|Sf3b2|319322|splicing factor 3b, subunit 2	AK149776|Sf3b2|319322|splicing factor 3b, subunit 2	AK012643|Sf3b2|319322|splicing factor 3b, subunit 2	AK142136|Sf3b2|319322|splicing factor 3b, subunit 2	AK146063|Sf3b2|319322|splicing factor 3b, subunit 2	BC049118|Sf3b2|319322|splicing factor 3b, subunit 2	NM_030109|Sf3b2|319322|splicing factor 3b, subunit 2
mm9_v1_chr16_-_13903174_13903239	0.721603	RFX1..5_RFXANK_RFXAP.p2	AK054329|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK170661|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	NM_001039533|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	NM_053181|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chr5_+_38430461_38430564	0.711927	RFX1..5_RFXANK_RFXAP.p2	AK007700|Stx18|71116|syntaxin 18	AK170165|Stx18|71116|syntaxin 18	NM_026959|Stx18|71116|syntaxin 18	BC021362|Stx18|71116|syntaxin 18	AK169273|Stx18|71116|syntaxin 18	AK016910|Stx18|71116|syntaxin 18
mm9_v1_chr2_-_51790406_51790534	0.685704	RFX1..5_RFXANK_RFXAP.p2	BC003333|Rbm43|71684|RNA binding motif protein 43	NM_001141981|Rbm43|71684|RNA binding motif protein 43	NM_030243|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr8_-_59029657_59029687	0.67972	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr8_+_73300712_73300842	0.675091	RFX1..5_RFXANK_RFXAP.p2	AK008596|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC051496|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	AK162274|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC092380|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC059891|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene
mm9_v1_chr2_-_152655725_152655826	0.659368	RFX1..5_RFXANK_RFXAP.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr7_-_142720274_142720338	0.650266	RFX1..5_RFXANK_RFXAP.p2	AK085267|Clrn3|212070|clarin 3	AK033715|Clrn3|212070|clarin 3	BC036176|Clrn3|212070|clarin 3	AK146608|Clrn3|212070|clarin 3	NM_178669|Clrn3|212070|clarin 3
mm9_v1_chr6_-_120314373_120314396	0.64843	RFX1..5_RFXANK_RFXAP.p2	AK031590|Ccdc77|67200|coiled-coil domain containing 77
mm9_v1_chr7_+_26465798_26465850	0.637617	RFX1..5_RFXANK_RFXAP.p2	AK141500|B9d2|232987|B9 protein domain 2	AK146227|B9d2|232987|B9 protein domain 2
mm9_v1_chr6_-_133803670_133803684	0.636182	RFX1..5_RFXANK_RFXAP.p2	BC013453|Kap|16483|kidney androgen regulated protein	M22810|Kap|16483|kidney androgen regulated protein	AK142506|Kap|16483|kidney androgen regulated protein	NM_010594|Kap|16483|kidney androgen regulated protein
mm9_v1_chr1_+_173085648_173085681	0.617905	RFX1..5_RFXANK_RFXAP.p2	AK157960|Mpz|17528|myelin protein zero	BC139139|Mpz|17528|myelin protein zero	BC141226|Mpz|17528|myelin protein zero
mm9_v1_chr3_+_88433400_88433451	0.60458	RFX1..5_RFXANK_RFXAP.p2	X95761|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr16_+_35770488_35770517	0.598143	RFX1..5_RFXANK_RFXAP.p2	AK028824|Hspbap1|66667|Hspb associated protein 1	AK138906|Hspbap1|66667|Hspb associated protein 1	AK049404|Hspbap1|66667|Hspb associated protein 1	AK076189|Hspbap1|66667|Hspb associated protein 1	AK017731|Hspbap1|66667|Hspb associated protein 1
mm9_v1_chrX_-_70363040_70363040	0.588074	RFX1..5_RFXANK_RFXAP.p2	BC051681|Xlr5a|574438|X-linked lymphocyte-regulated 5A	NM_001045539|Xlr5a|574438|X-linked lymphocyte-regulated 5A
mm9_v1_chr5_+_137170046_137170046	0.576493	RFX1..5_RFXANK_RFXAP.p2	NM_001085387|Myl10|59310|myosin, light chain 10, regulatory	X65979|Myl10|59310|myosin, light chain 10, regulatory
mm9_v1_chr10_-_128082881_128083048	0.572283	RFX1..5_RFXANK_RFXAP.p2	AK089522|Ikzf4|22781|IKAROS family zinc finger 4	AK170453|Ikzf4|22781|IKAROS family zinc finger 4	NM_011772|Ikzf4|22781|IKAROS family zinc finger 4
mm9_v1_chr4_-_118216327_118216339	0.559728	RFX1..5_RFXANK_RFXAP.p2	NM_172383|Tmem125|230678|transmembrane protein 125	AK050146|Tmem125|230678|transmembrane protein 125
mm9_v1_chr1_+_84836413_84836453	0.53263	RFX1..5_RFXANK_RFXAP.p2	NM_025386|Fbxo36|66153|F-box protein 36	AK008324|Fbxo36|66153|F-box protein 36	AK003856|Fbxo36|66153|F-box protein 36	BC049581|Fbxo36|66153|F-box protein 36	AK036072|Fbxo36|66153|F-box protein 36
mm9_v1_chr11_-_69362609_69362611	0.506582	RFX1..5_RFXANK_RFXAP.p2	NM_001081330|Dnahc2|327954|dynein, axonemal, heavy chain 2	AK051796|Dnahc2|327954|dynein, axonemal, heavy chain 2
mm9_v1_chr10_-_127984766_127984851	0.505406	RFX1..5_RFXANK_RFXAP.p2	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr1_+_74901489_74901677	0.502284	RFX1..5_RFXANK_RFXAP.p2	NM_009872|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100712|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC103550|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100714|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100715|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)
mm9_v1_chrX_+_9829439_9829558	0.499441	RFX1..5_RFXANK_RFXAP.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr4_-_123395382_123395431	0.483535	RFX1..5_RFXANK_RFXAP.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene	AK152845|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5	AK148505|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5	NM_001030274|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm9_v1_chrM_+_13543_13577	0.477589	RFX1..5_RFXANK_RFXAP.p2	
mm9_v1_chr9_+_64658817_64658817	0.467669	RFX1..5_RFXANK_RFXAP.p2	NM_001162917|Dennd4a|102442|DENN/MADD domain containing 4A
mm9_v1_chr9_-_105297572_105297616	0.45775	RFX1..5_RFXANK_RFXAP.p2	AK030042|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK054237|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK030186|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	NM_172461|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11
mm9_v1_chr16_+_32914183_32914232	0.455433	RFX1..5_RFXANK_RFXAP.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr7_-_133940879_133940922	0.45481	RFX1..5_RFXANK_RFXAP.p2	X03797|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr19_-_3282785_3282850	0.454371	RFX1..5_RFXANK_RFXAP.p2	BC083142|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK142456|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC133681|Ighmbp2|20589|immunoglobulin mu binding protein 2
mm9_v1_chr14_+_61403399_61403486	0.443924	RFX1..5_RFXANK_RFXAP.p2	NM_027436|Mipep|70478|mitochondrial intermediate peptidase	AK038479|Mipep|70478|mitochondrial intermediate peptidase	AK044460|Mipep|70478|mitochondrial intermediate peptidase	AK146428|Mipep|70478|mitochondrial intermediate peptidase	BC144798|Mipep|70478|mitochondrial intermediate peptidase	BC145711|Mipep|70478|mitochondrial intermediate peptidase	BC110358|Mipep|70478|mitochondrial intermediate peptidase	AK017491|Mipep|70478|mitochondrial intermediate peptidase	AK049000|Mipep|70478|mitochondrial intermediate peptidase	AK076613|Mipep|70478|mitochondrial intermediate peptidase
mm9_v1_chr12_+_109660951_109661025	0.43181	RFX1..5_RFXANK_RFXAP.p2	NM_001043335|Eml1|68519|echinoderm microtubule associated protein like 1
mm9_v1_chr11_-_59653240_59653315	0.423984	RFX1..5_RFXANK_RFXAP.p2	AK142318|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	AK048906|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	AF071313|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	BC068179|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	NM_011991|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm9_v1_chr7_+_146399173_146399304	0.422346	RFX1..5_RFXANK_RFXAP.p2	NM_001143755|Lrrc27|76612|leucine rich repeat containing 27	AK006931|Lrrc27|76612|leucine rich repeat containing 27
mm9_v1_chr1_+_189039382_189039433	0.419901	RFX1..5_RFXANK_RFXAP.p2	AK167826|Gpatch2|67769|G patch domain containing 2	AK169660|Gpatch2|67769|G patch domain containing 2	NM_026367|Gpatch2|67769|G patch domain containing 2	AK053781|Gpatch2|67769|G patch domain containing 2	AK011727|Gpatch2|67769|G patch domain containing 2	AK029990|Gpatch2|67769|G patch domain containing 2	AK032734|Gpatch2|67769|G patch domain containing 2	BC054810|Gpatch2|67769|G patch domain containing 2	AK017975|Gpatch2|67769|G patch domain containing 2
mm9_v1_chr5_-_42235518_42235530	0.413434	RFX1..5_RFXANK_RFXAP.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr8_+_114061310_114061413	0.409658	RFX1..5_RFXANK_RFXAP.p2	AK078819|Znrf1|170737|zinc and ring finger 1	AK076756|Znrf1|170737|zinc and ring finger 1	AK216619|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr10_-_77472453_77472498	0.399916	RFX1..5_RFXANK_RFXAP.p2	J03928|Pfkl|18641|phosphofructokinase, liver, B-type	AK036318|Pfkl|18641|phosphofructokinase, liver, B-type	BC052914|Pfkl|18641|phosphofructokinase, liver, B-type	AK159328|Pfkl|18641|phosphofructokinase, liver, B-type	BC020097|Pfkl|18641|phosphofructokinase, liver, B-type	BC029336|Pfkl|18641|phosphofructokinase, liver, B-type	AK081313|Pfkl|18641|phosphofructokinase, liver, B-type	AK030511|Pfkl|18641|phosphofructokinase, liver, B-type	AK008812|Pfkl|18641|phosphofructokinase, liver, B-type	AK168660|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr11_+_78349900_78350017	0.393119	RFX1..5_RFXANK_RFXAP.p2	AK139942|Ift20|55978|intraflagellar transport 20 homolog (Chlamydomonas)	AK002397|Ift20|55978|intraflagellar transport 20 homolog (Chlamydomonas)	NM_018854|Ift20|55978|intraflagellar transport 20 homolog (Chlamydomonas)	BC002040|Ift20|55978|intraflagellar transport 20 homolog (Chlamydomonas)	AY082613|Ift20|55978|intraflagellar transport 20 homolog (Chlamydomonas)
mm9_v1_chr9_-_44495469_44495477	0.387971	RFX1..5_RFXANK_RFXAP.p2	BC025451|Phldb1|102693|pleckstrin homology-like domain, family B, member 1
mm9_v1_chr11_-_12364886_12365020	0.377925	RFX1..5_RFXANK_RFXAP.p2	AK147366|Cobl|12808|cordon-bleu	AK147633|Cobl|12808|cordon-bleu	NM_172496|Cobl|12808|cordon-bleu
mm9_v1_chr10_-_6979627_6979716	0.376349	RFX1..5_RFXANK_RFXAP.p2	AK082372|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr2_+_32092184_32092232	0.37604	RFX1..5_RFXANK_RFXAP.p2	AK053326|Pomt1|99011|protein-O-mannosyltransferase 1	BC027325|Pomt1|99011|protein-O-mannosyltransferase 1	NM_145145|Pomt1|99011|protein-O-mannosyltransferase 1	AK053889|Pomt1|99011|protein-O-mannosyltransferase 1	AK200298|Pomt1|99011|protein-O-mannosyltransferase 1
mm9_v1_chr12_+_110089325_110089352	0.375234	RFX1..5_RFXANK_RFXAP.p2	AK149369|Slc25a47|104910|solute carrier family 25, member 47	BC089616|Slc25a47|104910|solute carrier family 25, member 47	NM_001012310|Slc25a47|104910|solute carrier family 25, member 47	BC055027|Slc25a47|104910|solute carrier family 25, member 47	BC035527|Slc25a47|104910|solute carrier family 25, member 47	BC069939|Slc25a47|104910|solute carrier family 25, member 47
mm9_v1_chr15_-_98051384_98051486	0.370144	RFX1..5_RFXANK_RFXAP.p2	AK039376|Olfr287|634104|olfactory receptor 287	NM_001011780|Olfr287|634104|olfactory receptor 287
mm9_v1_chr13_-_107726930_107727002	0.369756	RFX1..5_RFXANK_RFXAP.p2	BC031900|Ipo11|76582|importin 11	BC029746|Ipo11|76582|importin 11	NM_029665|Ipo11|76582|importin 11
mm9_v1_chr10_+_25128177_25128192	0.361191	RFX1..5_RFXANK_RFXAP.p2	BC023220|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	NM_013511|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC026708|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr10_-_41738158_41738199	0.344186	RFX1..5_RFXANK_RFXAP.p2	AK011447|Armc2|213402|armadillo repeat containing 2	NM_001034858|Armc2|213402|armadillo repeat containing 2
mm9_v1_chr9_+_59526881_59526990	0.332923	RFX1..5_RFXANK_RFXAP.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr6_+_142294174_142294216	0.330464	RFX1..5_RFXANK_RFXAP.p2	AK148411|Pyroxd1|232491|pyridine nucleotide-disulphide oxidoreductase domain 1	BC027061|Pyroxd1|232491|pyridine nucleotide-disulphide oxidoreductase domain 1	BC022914|Pyroxd1|232491|pyridine nucleotide-disulphide oxidoreductase domain 1	AK165677|Pyroxd1|232491|pyridine nucleotide-disulphide oxidoreductase domain 1	NM_183165|Pyroxd1|232491|pyridine nucleotide-disulphide oxidoreductase domain 1
mm9_v1_chr16_-_3884504_3884577	0.32636	RFX1..5_RFXANK_RFXAP.p2	AK172006|Zfp597|71063|zinc finger protein 597
mm9_v1_chr11_+_54251680_54251744	0.325855	RFX1..5_RFXANK_RFXAP.p2	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr10_-_80630456_80630508	0.319715	RFX1..5_RFXANK_RFXAP.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr17_-_23820984_23820992	0.316242	RFX1..5_RFXANK_RFXAP.p2	BC058186|Cldn9|56863|claudin 9	NM_020293|Cldn9|56863|claudin 9
mm9_v1_chr5_+_32541456_32541456	0.314325	RFX1..5_RFXANK_RFXAP.p2	AK161095|Plb1|665270|phospholipase B1	NM_001081407|Plb1|665270|phospholipase B1
mm9_v1_chr16_+_35770431_35770480	0.289971	RFX1..5_RFXANK_RFXAP.p2	AK089941|Hspbap1|66667|Hspb associated protein 1	NM_175111|Hspbap1|66667|Hspb associated protein 1
mm9_v1_chr1_-_175157322_175157359	0.247858	RFX1..5_RFXANK_RFXAP.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr7_+_26466176_26466176	0.245948	RFX1..5_RFXANK_RFXAP.p2	BC028440|B9d2|232987|B9 protein domain 2	NM_172148|B9d2|232987|B9 protein domain 2
mm9_v1_chr2_+_163470487_163470585	0.238136	RFX1..5_RFXANK_RFXAP.p2	AK002842|0610039K10Rik|68386|RIKEN cDNA 0610039K10 gene
mm9_v1_chr12_-_11272479_11272602	0.229443	RFX1..5_RFXANK_RFXAP.p2	BC138157|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC138158|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK031077|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC099936|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC090653|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	NM_177331|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK030995|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK158255|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)
mm9_v1_chr17_+_56602044_56602148	0.227952	RFX1..5_RFXANK_RFXAP.p2	AK016111|4930553P13Rik|75264|RIKEN cDNA 4930553P13 gene
mm9_v1_chr5_+_143419271_143419286	0.22354	RFX1..5_RFXANK_RFXAP.p2	BC016201|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_145601|Cngb1|333329|cyclic nucleotide gated channel beta 1	AK080705|Cngb1|333329|cyclic nucleotide gated channel beta 1
mm9_v1_chrX_+_97800835_97800900	0.221174	RFX1..5_RFXANK_RFXAP.p2	NM_133205|Arr3|170735|arrestin 3, retinal	AF156979|Arr3|170735|arrestin 3, retinal	BC017145|Arr3|170735|arrestin 3, retinal
mm9_v1_chr18_-_70689791_70689865	0.205779	RFX1..5_RFXANK_RFXAP.p2	BC082278|Poli|26447|polymerase (DNA directed), iota	NM_001136090|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr4_+_41412148_41412191	0.20248	RFX1..5_RFXANK_RFXAP.p2	AK132532|Nudt2|66401|nudix (nucleoside diphosphate linked moiety X)-type motif 2	NM_025539|Nudt2|66401|nudix (nucleoside diphosphate linked moiety X)-type motif 2	AK009933|Nudt2|66401|nudix (nucleoside diphosphate linked moiety X)-type motif 2	AK018771|Nudt2|66401|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm9_v1_chr16_-_43889756_43889795	0.198774	RFX1..5_RFXANK_RFXAP.p2	BC083089|Qtrtd1|106248|queuine tRNA-ribosyltransferase domain containing 1	BC017628|Qtrtd1|106248|queuine tRNA-ribosyltransferase domain containing 1	AK014045|Qtrtd1|106248|queuine tRNA-ribosyltransferase domain containing 1	NM_029128|Qtrtd1|106248|queuine tRNA-ribosyltransferase domain containing 1
mm9_v1_chr14_+_52504516_52504626	0.196196	RFX1..5_RFXANK_RFXAP.p2	NM_001029990|Mett11d1|52535|methyltransferase 11 domain containing 1	AK156895|Mett11d1|52535|methyltransferase 11 domain containing 1	AK172330|Mett11d1|52535|methyltransferase 11 domain containing 1	BC138944|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145472|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145473|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145474|Mett11d1|52535|methyltransferase 11 domain containing 1	AK087101|Mett11d1|52535|methyltransferase 11 domain containing 1	AK155096|Mett11d1|52535|methyltransferase 11 domain containing 1	AK009576|Mett11d1|52535|methyltransferase 11 domain containing 1	AK032357|Mett11d1|52535|methyltransferase 11 domain containing 1
mm9_v1_chr2_-_164683125_164683222	0.19165	RFX1..5_RFXANK_RFXAP.p2	BC003782|Pltp|18830|phospholipid transfer protein	AK149730|Pltp|18830|phospholipid transfer protein	AK148330|Pltp|18830|phospholipid transfer protein	NM_011125|Pltp|18830|phospholipid transfer protein
mm9_v1_chr2_-_106810547_106810547	0.189975	RFX1..5_RFXANK_RFXAP.p2	AK076781|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_173750|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr8_+_70014656_70014656	0.185307	RFX1..5_RFXANK_RFXAP.p2	NM_008673|Nat1|17960|N-acetyl transferase 1	U35885|Nat1|17960|N-acetyl transferase 1
mm9_v1_chr17_+_88929444_88929477	0.177576	RFX1..5_RFXANK_RFXAP.p2	NM_028658|Klraq1|73825|KLRAQ motif containing 1
mm9_v1_chr11_-_12364754_12364809	0.174687	RFX1..5_RFXANK_RFXAP.p2	AK049730|Cobl|12808|cordon-bleu	AY308745|Cobl|12808|cordon-bleu	BC145116|Cobl|12808|cordon-bleu	BC145118|Cobl|12808|cordon-bleu	BC150706|Cobl|12808|cordon-bleu	AK028833|Cobl|12808|cordon-bleu
mm9_v1_chr14_+_55551531_55551607	0.171503	RFX1..5_RFXANK_RFXAP.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr19_+_4839365_4839460	0.169235	RFX1..5_RFXANK_RFXAP.p2	NM_207268|Ccdc87|399599|coiled-coil domain containing 87	AK029877|Ccdc87|399599|coiled-coil domain containing 87	BC145660|Ccdc87|399599|coiled-coil domain containing 87
mm9_v1_chr10_+_57206184_57206291	0.168856	RFX1..5_RFXANK_RFXAP.p2	AK053976|Hsf2|15500|heat shock factor 2	NM_008297|Hsf2|15500|heat shock factor 2	BC018414|Hsf2|15500|heat shock factor 2	AK052270|Hsf2|15500|heat shock factor 2
mm9_v1_chr8_-_67212325_67212399	0.168741	RFX1..5_RFXANK_RFXAP.p2	AK146684|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK169017|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK045059|Sc4mol|66234|sterol-C4-methyl oxidase-like	BC006802|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK005441|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK005090|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK151135|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK154682|Sc4mol|66234|sterol-C4-methyl oxidase-like	NM_025436|Sc4mol|66234|sterol-C4-methyl oxidase-like	AK010570|Sc4mol|66234|sterol-C4-methyl oxidase-like
mm9_v1_chr5_+_124562306_124562355	0.160785	RFX1..5_RFXANK_RFXAP.p2	AK168946|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	BC069872|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	AK004943|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	AK017497|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	AK018534|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	NM_025671|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2	AK004916|Ogfod2|66627|2-oxoglutarate and iron-dependent oxygenase domain containing 2
mm9_v1_chr17_+_56724404_56724414	0.15887	RFX1..5_RFXANK_RFXAP.p2	NM_001163300|Safb|224903|scaffold attachment factor B
mm9_v1_chr2_-_90905846_90905881	0.147629	RFX1..5_RFXANK_RFXAP.p2	AK003191|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr4_+_137860701_137860792	0.144356	RFX1..5_RFXANK_RFXAP.p2	AK081542|Ddost|13200|dolichyl-di-phosphooligosaccharide-protein glycotransferase	AK150683|Ddost|13200|dolichyl-di-phosphooligosaccharide-protein glycotransferase	AK148095|Ddost|13200|dolichyl-di-phosphooligosaccharide-protein glycotransferase	AK084267|Ddost|13200|dolichyl-di-phosphooligosaccharide-protein glycotransferase	AK077651|Ddost|13200|dolichyl-di-phosphooligosaccharide-protein glycotransferase
mm9_v1_chr17_+_8589493_8589596	0.117743	RFX1..5_RFXANK_RFXAP.p2	AF072546|T2|21331|brachyury 2
mm9_v1_chr5_-_124053691_124053818	0.111168	RFX1..5_RFXANK_RFXAP.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr7_+_133630844_133630958	0.10669	RFX1..5_RFXANK_RFXAP.p2	NM_001163713|Tufm|233870|Tu translation elongation factor, mitochondrial	NM_172745|Tufm|233870|Tu translation elongation factor, mitochondrial	AK152858|Tufm|233870|Tu translation elongation factor, mitochondrial	AK153135|Tufm|233870|Tu translation elongation factor, mitochondrial	BC100596|Tufm|233870|Tu translation elongation factor, mitochondrial	AK084724|Tufm|233870|Tu translation elongation factor, mitochondrial	BC060959|Tufm|233870|Tu translation elongation factor, mitochondrial	AK075857|Tufm|233870|Tu translation elongation factor, mitochondrial
mm9_v1_chr1_+_6720153_6720223	0.10569	RFX1..5_RFXANK_RFXAP.p2	AK133743|St18|240690|suppression of tumorigenicity 18	BC118528|St18|240690|suppression of tumorigenicity 18	AK137440|St18|240690|suppression of tumorigenicity 18	AK141513|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr17_+_88929523_88929634	0.104182	RFX1..5_RFXANK_RFXAP.p2	BC137673|Klraq1|73825|KLRAQ motif containing 1	AK170254|Klraq1|73825|KLRAQ motif containing 1	BC106118|Klraq1|73825|KLRAQ motif containing 1	AK028185|Klraq1|73825|KLRAQ motif containing 1	AK155094|Klraq1|73825|KLRAQ motif containing 1
mm9_v1_chr18_-_46901117_46901234	0.0917584	RFX1..5_RFXANK_RFXAP.p2	BC070470|Atg12|67526|autophagy-related 12 (yeast)	AB066216|Atg12|67526|autophagy-related 12 (yeast)	AK167027|Atg12|67526|autophagy-related 12 (yeast)	AK008698|Atg12|67526|autophagy-related 12 (yeast)	AK016474|Atg12|67526|autophagy-related 12 (yeast)	AK039278|Atg12|67526|autophagy-related 12 (yeast)	AK039546|Atg12|67526|autophagy-related 12 (yeast)	AK005405|Atg12|67526|autophagy-related 12 (yeast)	NM_026217|Atg12|67526|autophagy-related 12 (yeast)
mm9_v1_chr7_-_106331080_106331233	0.0356893	RFX1..5_RFXANK_RFXAP.p2	AF384160|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK016660|Dgat2|67800|diacylglycerol O-acyltransferase 2	BC043447|Dgat2|67800|diacylglycerol O-acyltransferase 2	NM_026384|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK002443|Dgat2|67800|diacylglycerol O-acyltransferase 2
mm9_v1_chr7_+_129210684_129210770	0.0341174	RFX1..5_RFXANK_RFXAP.p2	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr15_-_80935436_80935488	0.0282974	RFX1..5_RFXANK_RFXAP.p2	NM_153049|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	AK155937|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm9_v1_chr8_-_97830469_97830484	0.0184044	RFX1..5_RFXANK_RFXAP.p2	AK080705|Cngb1|333329|cyclic nucleotide gated channel beta 1	BC016201|Cngb1|333329|cyclic nucleotide gated channel beta 1	HQ116386|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_001195413|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_145601|Cngb1|333329|cyclic nucleotide gated channel beta 1
mm9_v1_chr16_-_31274947_31275377	0.0138955	RFX1..5_RFXANK_RFXAP.p2	AK015349|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK053657|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069886|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK002671|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK032462|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK028603|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069885|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK150281|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_025800|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm9_v1_chr2_+_112295120_112295230	0.0100006	RFX1..5_RFXANK_RFXAP.p2	NM_133749|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC080668|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ250345|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ278128|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK088738|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK013744|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115477|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115478|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK182314|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr19_+_42164922_42164992	0.00846686	RFX1..5_RFXANK_RFXAP.p2	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr8_-_122099061_122099084	0.0069349	RFX1..5_RFXANK_RFXAP.p2	AK088412|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
