mm9_v1_chr3_+_103664214_103664288	86.9933	RUNX1..3.p2	M90388|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_008979|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK169559|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC055377|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
mm9_v1_chr16_-_92826307_92826318	85.2811	RUNX1..3.p2	AK165307|Runx1|12394|runt related transcription factor 1	AK145098|Runx1|12394|runt related transcription factor 1	NM_001111021|Runx1|12394|runt related transcription factor 1	NM_001111022|Runx1|12394|runt related transcription factor 1	AK040240|Runx1|12394|runt related transcription factor 1
mm9_v1_chr11_-_79337178_79337240	77.6431	RUNX1..3.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr1_-_146096156_146096233	69.4222	RUNX1..3.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chr1_-_140071818_140071883	68.3242	RUNX1..3.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr16_-_92826239_92826287	65.7394	RUNX1..3.p2	BC069929|Runx1|12394|runt related transcription factor 1	AK137493|Runx1|12394|runt related transcription factor 1
mm9_v1_chr4_+_134676559_134676571	65.6349	RUNX1..3.p2	NM_019732|Runx3|12399|runt related transcription factor 3	AK155436|Runx3|12399|runt related transcription factor 3	AK155802|Runx3|12399|runt related transcription factor 3
mm9_v1_chr19_+_12873063_12873098	62.2619	RUNX1..3.p2	AK039922|Lpxn|107321|leupaxin	AB071194|Lpxn|107321|leupaxin	NM_134152|Lpxn|107321|leupaxin
mm9_v1_chr19_+_12873115_12873132	61.5367	RUNX1..3.p2	BC026563|Lpxn|107321|leupaxin
mm9_v1_chr4_-_143571878_143571887	55.4798	RUNX1..3.p2	AK019465|3930401B19Rik|77570|RIKEN cDNA 3930401B19 gene
mm9_v1_chr11_-_79337251_79337263	54.2502	RUNX1..3.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr2_-_58012447_58012596	52.0503	RUNX1..3.p2	AF192525|Cytip|227929|cytohesin 1 interacting protein	AK089364|Cytip|227929|cytohesin 1 interacting protein	AF374273|Cytip|227929|cytohesin 1 interacting protein	AK152784|Cytip|227929|cytohesin 1 interacting protein	AK169575|Cytip|227929|cytohesin 1 interacting protein	BC007144|Cytip|227929|cytohesin 1 interacting protein	AK168343|Cytip|227929|cytohesin 1 interacting protein	AK037842|Cytip|227929|cytohesin 1 interacting protein	AK157859|Cytip|227929|cytohesin 1 interacting protein	AK166254|Cytip|227929|cytohesin 1 interacting protein	AK170544|Cytip|227929|cytohesin 1 interacting protein	AK170796|Cytip|227929|cytohesin 1 interacting protein	AK171467|Cytip|227929|cytohesin 1 interacting protein	AK172380|Cytip|227929|cytohesin 1 interacting protein	NM_139200|Cytip|227929|cytohesin 1 interacting protein	AK170301|Cytip|227929|cytohesin 1 interacting protein	AK172071|Cytip|227929|cytohesin 1 interacting protein	AK030882|Cytip|227929|cytohesin 1 interacting protein
mm9_v1_chr11_-_83462722_83462879	48.6544	RUNX1..3.p2	AK153155|Ccl3|20302|chemokine (C-C motif) ligand 3	EU366956|Ccl3|20302|chemokine (C-C motif) ligand 3	BC111443|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065939|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065940|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065941|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065942|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065943|Ccl3|20302|chemokine (C-C motif) ligand 3	J04491|Ccl3|20302|chemokine (C-C motif) ligand 3	X12531|Ccl3|20302|chemokine (C-C motif) ligand 3	M23447|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150590|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150634|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150698|Ccl3|20302|chemokine (C-C motif) ligand 3	AK151581|Ccl3|20302|chemokine (C-C motif) ligand 3	AK152648|Ccl3|20302|chemokine (C-C motif) ligand 3	AK155058|Ccl3|20302|chemokine (C-C motif) ligand 3	NM_011337|Ccl3|20302|chemokine (C-C motif) ligand 3
mm9_v1_chr19_-_20465115_20465131	47.5428	RUNX1..3.p2	BC002289|Anxa1|16952|annexin A1
mm9_v1_chr17_-_44951745_44951745	45.0863	RUNX1..3.p2	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr7_+_51827801_51827942	44.3368	RUNX1..3.p2	AB038144|Napsa|16541|napsin A aspartic peptidase	D88899|Napsa|16541|napsin A aspartic peptidase	NM_008437|Napsa|16541|napsin A aspartic peptidase
mm9_v1_chr1_-_140071630_140071766	44.2211	RUNX1..3.p2	M11934|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M92933|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr5_-_65324796_65324842	43.7115	RUNX1..3.p2	AK143721|Tlr1|21897|toll-like receptor 1
mm9_v1_chr3_-_135271247_135271409	43.6856	RUNX1..3.p2	AK159423|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S66656|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S89033|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr15_-_9459496_9459589	43.4197	RUNX1..3.p2	AF078906|Il7r|16197|interleukin 7 receptor	AK041838|Il7r|16197|interleukin 7 receptor	M29697|Il7r|16197|interleukin 7 receptor	AK042264|Il7r|16197|interleukin 7 receptor	AK154215|Il7r|16197|interleukin 7 receptor	BC089571|Il7r|16197|interleukin 7 receptor	AK154516|Il7r|16197|interleukin 7 receptor
mm9_v1_chr15_-_9459612_9459630	43.0617	RUNX1..3.p2	AK040364|Il7r|16197|interleukin 7 receptor	AK040740|Il7r|16197|interleukin 7 receptor	NM_008372|Il7r|16197|interleukin 7 receptor
mm9_v1_chr8_+_90806890_90806890	42.2309	RUNX1..3.p2	AK155646|Adcy7|11513|adenylate cyclase 7	NM_001109756|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr3_-_135271190_135271201	42.0605	RUNX1..3.p2	AK089660|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr1_-_133096633_133096765	42.007	RUNX1..3.p2	AK131147|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AY261333|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK088751|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK170703|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK155869|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5
mm9_v1_chrX_-_7667574_7667627	40.7805	RUNX1..3.p2	U42471|Was|22376|Wiskott-Aldrich syndrome homolog (human)	U29673|Was|22376|Wiskott-Aldrich syndrome homolog (human)	U54788|Was|22376|Wiskott-Aldrich syndrome homolog (human)	NM_009515|Was|22376|Wiskott-Aldrich syndrome homolog (human)
mm9_v1_chr11_+_82878590_82878700	40.5582	RUNX1..3.p2	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr10_-_61970481_61970509	40.3559	RUNX1..3.p2	BC037076|Srgn|19073|serglycin	J04549|Srgn|19073|serglycin	AK157945|Srgn|19073|serglycin	M34603|Srgn|19073|serglycin	NM_011157|Srgn|19073|serglycin	X16133|Srgn|19073|serglycin	AK168124|Srgn|19073|serglycin	AK151357|Srgn|19073|serglycin
mm9_v1_chr2_-_34813633_34813653	39.1672	RUNX1..3.p2	BC096595|Traf1|22029|TNF receptor-associated factor 1	AK145075|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr10_+_79457716_79457753	37.6947	RUNX1..3.p2	AK209768|Cnn2|12798|calponin 2	AK210808|Cnn2|12798|calponin 2	AK208961|Cnn2|12798|calponin 2	AK209669|Cnn2|12798|calponin 2	AK218447|Cnn2|12798|calponin 2	AK219047|Cnn2|12798|calponin 2
mm9_v1_chrX_+_104344953_104344955	37.2728	RUNX1..3.p2	NM_175442|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene	AK041740|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr2_-_34813680_34813690	36.9236	RUNX1..3.p2	AK172598|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr7_+_133728451_133728464	35.9079	RUNX1..3.p2	AK156422|Apobr|171504|apolipoprotein B receptor
mm9_v1_chr2_+_150396150_150396221	35.8459	RUNX1..3.p2	AK004420|Cst7|13011|cystatin F (leukocystatin)	NM_009977|Cst7|13011|cystatin F (leukocystatin)	BC117047|Cst7|13011|cystatin F (leukocystatin)	BC117049|Cst7|13011|cystatin F (leukocystatin)	AB015224|Cst7|13011|cystatin F (leukocystatin)	AK170583|Cst7|13011|cystatin F (leukocystatin)	AF031825|Cst7|13011|cystatin F (leukocystatin)
mm9_v1_chr7_-_133848235_133848282	35.0022	RUNX1..3.p2	BC053398|Coro1a|12721|coronin, actin binding protein 1A	BC002136|Coro1a|12721|coronin, actin binding protein 1A	AK075799|Coro1a|12721|coronin, actin binding protein 1A	AK146290|Coro1a|12721|coronin, actin binding protein 1A	AK155860|Coro1a|12721|coronin, actin binding protein 1A	AK172447|Coro1a|12721|coronin, actin binding protein 1A	AF495468|Coro1a|12721|coronin, actin binding protein 1A	NM_009898|Coro1a|12721|coronin, actin binding protein 1A	AK040885|Coro1a|12721|coronin, actin binding protein 1A	AK150962|Coro1a|12721|coronin, actin binding protein 1A	AK151755|Coro1a|12721|coronin, actin binding protein 1A	AK165296|Coro1a|12721|coronin, actin binding protein 1A	AK155527|Coro1a|12721|coronin, actin binding protein 1A
mm9_v1_chr3_-_58905678_58905742	34.8455	RUNX1..3.p2	AK154964|Gpr171|229323|G protein-coupled receptor 171	AK089287|Gpr171|229323|G protein-coupled receptor 171	BC024054|Gpr171|229323|G protein-coupled receptor 171	AK041381|Gpr171|229323|G protein-coupled receptor 171	AK041582|Gpr171|229323|G protein-coupled receptor 171	AK083323|Gpr171|229323|G protein-coupled receptor 171	AK089252|Gpr171|229323|G protein-coupled receptor 171	AK154725|Gpr171|229323|G protein-coupled receptor 171	AK079674|Gpr171|229323|G protein-coupled receptor 171	NM_173398|Gpr171|229323|G protein-coupled receptor 171
mm9_v1_chrX_-_54591905_54591905	33.7992	RUNX1..3.p2	AF393831|Arhgef6|73341|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	NM_152801|Arhgef6|73341|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm9_v1_chr5_-_138312923_138313044	32.6887	RUNX1..3.p2	BC147405|Pilrb2|545812|paired immunoglobin-like type 2 receptor beta 2	BC147406|Pilrb2|545812|paired immunoglobin-like type 2 receptor beta 2	AK036467|Pilrb2|545812|paired immunoglobin-like type 2 receptor beta 2	NM_001024932|Pilrb2|545812|paired immunoglobin-like type 2 receptor beta 2
mm9_v1_chr15_-_78403110_78403220	32.4425	RUNX1..3.p2	X53247|Rac2|19354|RAS-related C3 botulinum substrate 2	BC005455|Rac2|19354|RAS-related C3 botulinum substrate 2	AK007561|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088805|Rac2|19354|RAS-related C3 botulinum substrate 2	AK144136|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088415|Rac2|19354|RAS-related C3 botulinum substrate 2	AK011045|Rac2|19354|RAS-related C3 botulinum substrate 2	AK171321|Rac2|19354|RAS-related C3 botulinum substrate 2	NM_009008|Rac2|19354|RAS-related C3 botulinum substrate 2
mm9_v1_chr17_+_29629987_29630031	32.1184	RUNX1..3.p2	AK154127|Pim1|18712|proviral integration site 1
mm9_v1_chr14_+_75576599_75576717	32.0719	RUNX1..3.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr3_-_94946256_94946295	31.3774	RUNX1..3.p2	BC055879|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	BC094616|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	AK007540|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	NM_027206|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2
mm9_v1_chr1_-_133176085_133176148	30.8513	RUNX1..3.p2	AK149911|Ikbke|56489|inhibitor of kappaB kinase epsilon	AK088580|Ikbke|56489|inhibitor of kappaB kinase epsilon	AK153046|Ikbke|56489|inhibitor of kappaB kinase epsilon	NM_019777|Ikbke|56489|inhibitor of kappaB kinase epsilon
mm9_v1_chr7_-_50788445_50788507	30.5634	RUNX1..3.p2	AK089205|Cd33|12489|CD33 antigen	AK155745|Cd33|12489|CD33 antigen	S71345|Cd33|12489|CD33 antigen	S71403|Cd33|12489|CD33 antigen	AK170937|Cd33|12489|CD33 antigen
mm9_v1_chr11_-_79343891_79344047	30.2942	RUNX1..3.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr7_+_129432585_129432762	29.93	RUNX1..3.p2	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr19_-_20465158_20465166	29.7828	RUNX1..3.p2	AK167612|Anxa1|16952|annexin A1	AK171422|Anxa1|16952|annexin A1	NM_010730|Anxa1|16952|annexin A1	AK002681|Anxa1|16952|annexin A1	AK037064|Anxa1|16952|annexin A1	AK140838|Anxa1|16952|annexin A1	AK150564|Anxa1|16952|annexin A1	AK150718|Anxa1|16952|annexin A1	AK153156|Anxa1|16952|annexin A1	AK153490|Anxa1|16952|annexin A1	AK154568|Anxa1|16952|annexin A1	AK170612|Anxa1|16952|annexin A1	AK049455|Anxa1|16952|annexin A1
mm9_v1_chrX_+_104451216_104451366	29.5589	RUNX1..3.p2	AK171832|Gpr174|213439|G protein-coupled receptor 174	NM_001177781|Gpr174|213439|G protein-coupled receptor 174	AK156069|Gpr174|213439|G protein-coupled receptor 174	AK153611|Gpr174|213439|G protein-coupled receptor 174	NM_001033251|Gpr174|213439|G protein-coupled receptor 174
mm9_v1_chr5_-_101001191_101001194	29.2662	RUNX1..3.p2	BC010789|Plac8|231507|placenta-specific 8
mm9_v1_chr7_+_51827955_51827985	28.6985	RUNX1..3.p2	AK002520|Napsa|16541|napsin A aspartic peptidase	AK007861|Napsa|16541|napsin A aspartic peptidase	AK170013|Napsa|16541|napsin A aspartic peptidase	AK152663|Napsa|16541|napsin A aspartic peptidase	BC014813|Napsa|16541|napsin A aspartic peptidase
mm9_v1_chr7_+_150191542_150191714	28.3947	RUNX1..3.p2	AK154694|Tspan32|27027|tetraspanin 32	NM_001128081|Tspan32|27027|tetraspanin 32	NM_001128082|Tspan32|27027|tetraspanin 32	NM_020286|Tspan32|27027|tetraspanin 32	AK171199|Tspan32|27027|tetraspanin 32	BC051204|Tspan32|27027|tetraspanin 32	BC055858|Tspan32|27027|tetraspanin 32	AK017989|Tspan32|27027|tetraspanin 32	AF291425|Tspan32|27027|tetraspanin 32	AJ279791|Tspan32|27027|tetraspanin 32	AJ279792|Tspan32|27027|tetraspanin 32	AJ279793|Tspan32|27027|tetraspanin 32	AJ279794|Tspan32|27027|tetraspanin 32	AJ279795|Tspan32|27027|tetraspanin 32	AF175771|Tspan32|27027|tetraspanin 32
mm9_v1_chr7_-_50788540_50788580	28.1986	RUNX1..3.p2	BC132379|Cd33|12489|CD33 antigen	NM_001111058|Cd33|12489|CD33 antigen	NM_021293|Cd33|12489|CD33 antigen
mm9_v1_chr5_-_101001209_101001243	28.1085	RUNX1..3.p2	AF263458|Plac8|231507|placenta-specific 8	AK007369|Plac8|231507|placenta-specific 8	NM_139198|Plac8|231507|placenta-specific 8	AJ422151|Plac8|231507|placenta-specific 8
mm9_v1_chr7_+_129432810_129432849	28.0946	RUNX1..3.p2	X53532|Prkcb|18751|protein kinase C, beta	BC127083|Prkcb|18751|protein kinase C, beta	X59274|Prkcb|18751|protein kinase C, beta
mm9_v1_chr7_+_25155279_25155362	28.048	RUNX1..3.p2	AK010943|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_001163510|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_008433|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK155910|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	BC010274|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr5_-_138299171_138299276	27.5769	RUNX1..3.p2	AB122024|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1	BC145880|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1	BC145906|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1	BC172053|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1	AJ400847|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1	NM_133209|Pilrb1|170741|paired immunoglobin-like type 2 receptor beta 1
mm9_v1_chr7_+_133728483_133728521	27.3658	RUNX1..3.p2	BC030718|Apobr|171504|apolipoprotein B receptor	AF141335|Apobr|171504|apolipoprotein B receptor	NM_138310|Apobr|171504|apolipoprotein B receptor
mm9_v1_chr10_-_61960613_61960625	27.2738	RUNX1..3.p2	AK087960|Srgn|19073|serglycin
mm9_v1_chrX_+_104284572_104284678	26.3819	RUNX1..3.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr1_+_60803231_60803317	26.2451	RUNX1..3.p2	NM_007642|Cd28|12487|CD28 antigen	AK041322|Cd28|12487|CD28 antigen	M34563|Cd28|12487|CD28 antigen	AK088021|Cd28|12487|CD28 antigen	AK030812|Cd28|12487|CD28 antigen	BC064058|Cd28|12487|CD28 antigen
mm9_v1_chr11_+_100740999_100741022	25.8535	RUNX1..3.p2	AK134012|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr11_-_79344055_79344121	25.8166	RUNX1..3.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr3_-_135271220_135271233	25.6993	RUNX1..3.p2	L28117|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr12_+_87027595_87027673	25.5278	RUNX1..3.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr13_-_55122556_55122626	25.4883	RUNX1..3.p2	AK149992|Hk3|212032|hexokinase 3	BC028480|Hk3|212032|hexokinase 3	AK149651|Hk3|212032|hexokinase 3	AK159857|Hk3|212032|hexokinase 3	AK170813|Hk3|212032|hexokinase 3	AK171248|Hk3|212032|hexokinase 3	AK140444|Hk3|212032|hexokinase 3	AK163658|Hk3|212032|hexokinase 3
mm9_v1_chr1_+_173319048_173319419	25.0875	RUNX1..3.p2	AK147757|Arhgap30|226652|Rho GTPase activating protein 30	NM_001005508|Arhgap30|226652|Rho GTPase activating protein 30	AK156351|Arhgap30|226652|Rho GTPase activating protein 30	AK030911|Arhgap30|226652|Rho GTPase activating protein 30	BC082573|Arhgap30|226652|Rho GTPase activating protein 30	AK031319|Arhgap30|226652|Rho GTPase activating protein 30
mm9_v1_chr6_-_122552269_122552466	24.4002	RUNX1..3.p2	AK146427|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK151799|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK166412|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK165209|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC003792|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001134391|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_031159|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22262|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22263|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm9_v1_chr17_+_47736273_47736367	24.3378	RUNX1..3.p2	AK191156|Ccnd3|12445|cyclin D3	AK196525|Ccnd3|12445|cyclin D3	AK196937|Ccnd3|12445|cyclin D3	AK201151|Ccnd3|12445|cyclin D3	AK208250|Ccnd3|12445|cyclin D3	AK209470|Ccnd3|12445|cyclin D3
mm9_v1_chr7_-_134281327_134281330	23.9852	RUNX1..3.p2	AK041480|Spn|20737|sialophorin	AK041712|Spn|20737|sialophorin	AK077764|Spn|20737|sialophorin	AK134098|Spn|20737|sialophorin	NM_001037810|Spn|20737|sialophorin	NM_009259|Spn|20737|sialophorin
mm9_v1_chr3_+_84470230_84470299	23.8822	RUNX1..3.p2	BC096432|Tmem154|320782|transmembrane protein 154	AK170385|Tmem154|320782|transmembrane protein 154	AK170665|Tmem154|320782|transmembrane protein 154	AK170626|Tmem154|320782|transmembrane protein 154
mm9_v1_chr13_-_55122670_55122716	23.4874	RUNX1..3.p2	AK171214|Hk3|212032|hexokinase 3	AK162637|Hk3|212032|hexokinase 3	AK171580|Hk3|212032|hexokinase 3	NM_001033245|Hk3|212032|hexokinase 3	AK154603|Hk3|212032|hexokinase 3
mm9_v1_chr19_+_5878465_5878648	23.3822	RUNX1..3.p2	NM_134154|Slc25a45|107375|solute carrier family 25, member 45	BC037680|Slc25a45|107375|solute carrier family 25, member 45	BC022156|Slc25a45|107375|solute carrier family 25, member 45
mm9_v1_chr7_-_147174332_147174467	23.2802	RUNX1..3.p2	AK134118|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK151535|Adam8|11501|a disintegrin and metallopeptidase domain 8
mm9_v1_chr7_+_25155455_25155523	23.1417	RUNX1..3.p2	AB128930|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AF072884|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK085752|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr11_-_106175797_106175983	22.9054	RUNX1..3.p2	CT010358|Cd79b|15985|CD79B antigen	AK143573|Cd79b|15985|CD79B antigen	BC012226|Cd79b|15985|CD79B antigen	NM_008339|Cd79b|15985|CD79B antigen	J03857|Cd79b|15985|CD79B antigen
mm9_v1_chr3_+_84470113_84470209	22.7465	RUNX1..3.p2	AK081441|Tmem154|320782|transmembrane protein 154	NM_177260|Tmem154|320782|transmembrane protein 154	AK171510|Tmem154|320782|transmembrane protein 154	BC113174|Tmem154|320782|transmembrane protein 154	BC113175|Tmem154|320782|transmembrane protein 154	AK154236|Tmem154|320782|transmembrane protein 154	AK037111|Tmem154|320782|transmembrane protein 154
mm9_v1_chr3_-_106592919_106593066	22.6845	RUNX1..3.p2	BC052905|Cd53|12508|CD53 antigen	AK160326|Cd53|12508|CD53 antigen	BC021310|Cd53|12508|CD53 antigen	AK156510|Cd53|12508|CD53 antigen	NM_007651|Cd53|12508|CD53 antigen
mm9_v1_chrX_-_98929396_98929485	22.6179	RUNX1..3.p2	AF045146|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	BC096626|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	AB003174|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	NM_009910|Cxcr3|12766|chemokine (C-X-C motif) receptor 3
mm9_v1_chr6_-_123239765_123239846	22.602	RUNX1..3.p2	CT010223|Clec4e|56619|C-type lectin domain family 4, member e	AK170698|Clec4e|56619|C-type lectin domain family 4, member e	BC003218|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr19_+_4154645_4154678	22.2951	RUNX1..3.p2	NM_016933|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	AK088334|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	AK165203|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	BC013273|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	BC100560|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	D10105|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm9_v1_chrX_+_83115611_83115703	21.4833	RUNX1..3.p2	NM_001163539|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK155591|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK154689|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene
mm9_v1_chr13_-_55122654_55122659	20.6376	RUNX1..3.p2	AK159906|Hk3|212032|hexokinase 3	AK160018|Hk3|212032|hexokinase 3	AK160063|Hk3|212032|hexokinase 3	AK155701|Hk3|212032|hexokinase 3
mm9_v1_chr1_+_58859345_58859473	20.3429	RUNX1..3.p2	NM_001080126|Casp8|12370|caspase 8	AK153340|Casp8|12370|caspase 8
mm9_v1_chr5_-_114280434_114280521	20.1852	RUNX1..3.p2	AK089214|Selplg|20345|selectin, platelet (p-selectin) ligand	AK155762|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156933|Selplg|20345|selectin, platelet (p-selectin) ligand	AK158134|Selplg|20345|selectin, platelet (p-selectin) ligand	BC003874|Selplg|20345|selectin, platelet (p-selectin) ligand	AK172077|Selplg|20345|selectin, platelet (p-selectin) ligand	AK171693|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156551|Selplg|20345|selectin, platelet (p-selectin) ligand	AK089188|Selplg|20345|selectin, platelet (p-selectin) ligand	NM_009151|Selplg|20345|selectin, platelet (p-selectin) ligand
mm9_v1_chr14_+_71174110_71174225	20.0275	RUNX1..3.p2	AK159472|Dok2|13449|docking protein 2	AK159466|Dok2|13449|docking protein 2	AF030627|Dok2|13449|docking protein 2	NM_010071|Dok2|13449|docking protein 2	AK155579|Dok2|13449|docking protein 2	AF035117|Dok2|13449|docking protein 2	BC004590|Dok2|13449|docking protein 2	AF059583|Dok2|13449|docking protein 2	AK158246|Dok2|13449|docking protein 2
mm9_v1_chr11_+_102297953_102298100	19.8327	RUNX1..3.p2	
mm9_v1_chr1_+_40522396_40522520	19.8209	RUNX1..3.p2	AK089237|Il18r1|16182|interleukin 18 receptor 1	NM_001161842|Il18r1|16182|interleukin 18 receptor 1	AK170705|Il18r1|16182|interleukin 18 receptor 1	NM_001161843|Il18r1|16182|interleukin 18 receptor 1	BC023240|Il18r1|16182|interleukin 18 receptor 1
mm9_v1_chr7_+_26471968_26472056	19.6285	RUNX1..3.p2	AJ009862|Tgfb1|21803|transforming growth factor, beta 1	NM_011577|Tgfb1|21803|transforming growth factor, beta 1	AK144163|Tgfb1|21803|transforming growth factor, beta 1
mm9_v1_chr11_-_95703752_95703789	19.502	RUNX1..3.p2	NM_025659|Abi3|66610|ABI gene family, member 3	AK037144|Abi3|66610|ABI gene family, member 3	NM_001163464|Abi3|66610|ABI gene family, member 3
mm9_v1_chr7_+_25155415_25155441	19.3768	RUNX1..3.p2	AF042487|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr10_-_116719183_116719359	19.2608	RUNX1..3.p2	BC002069|Lyz2|17105|lysozyme 2	BC054463|Lyz2|17105|lysozyme 2	AK159640|Lyz2|17105|lysozyme 2	AK148516|Lyz2|17105|lysozyme 2	AK150998|Lyz2|17105|lysozyme 2	AK153244|Lyz2|17105|lysozyme 2	AK153475|Lyz2|17105|lysozyme 2	NM_017372|Lyz2|17105|lysozyme 2
mm9_v1_chr3_-_20142068_20142081	19.2606	RUNX1..3.p2	BC108409|Cpa3|12873|carboxypeptidase A3, mast cell	J05118|Cpa3|12873|carboxypeptidase A3, mast cell	AK088906|Cpa3|12873|carboxypeptidase A3, mast cell	NM_007753|Cpa3|12873|carboxypeptidase A3, mast cell
mm9_v1_chr2_+_164773719_164773750	18.8818	RUNX1..3.p2	D12712|Mmp9|17395|matrix metallopeptidase 9	AK142787|Mmp9|17395|matrix metallopeptidase 9	AK159292|Mmp9|17395|matrix metallopeptidase 9	AK161176|Mmp9|17395|matrix metallopeptidase 9	Z27231|Mmp9|17395|matrix metallopeptidase 9	AK004651|Mmp9|17395|matrix metallopeptidase 9	BC046991|Mmp9|17395|matrix metallopeptidase 9	NM_013599|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr5_-_136606906_136606948	18.0085	RUNX1..3.p2	AK207344|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK210612|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK178976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK187635|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr6_-_98877291_98877410	17.676	RUNX1..3.p2	
mm9_v1_chr6_+_48986501_48986620	17.5737	RUNX1..3.p2	NM_053110|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171517|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK149740|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK154617|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159270|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159165|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK170506|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr10_+_117878101_117878253	17.4738	RUNX1..3.p2	M28621|Ifng|15978|interferon gamma	AK089574|Ifng|15978|interferon gamma	NM_008337|Ifng|15978|interferon gamma	K00083|Ifng|15978|interferon gamma	FJ617514|Ifng|15978|interferon gamma	FJ617515|Ifng|15978|interferon gamma	FJ617516|Ifng|15978|interferon gamma	BC119063|Ifng|15978|interferon gamma	BC119065|Ifng|15978|interferon gamma	EF423643|Ifng|15978|interferon gamma	AY423847|Ifng|15978|interferon gamma
mm9_v1_chr10_+_51210768_51210823	17.4491	RUNX1..3.p2	AK089372|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK155750|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK089334|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170615|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	NM_013532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC006591|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05264|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05266|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC099532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170368|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4
mm9_v1_chr14_-_33998251_33998251	17.3707	RUNX1..3.p2	NM_001146022|Wdfy4|545030|WD repeat and FYVE domain containing 4
mm9_v1_chr9_+_108239210_108239322	17.0092	RUNX1..3.p2	AK177758|Rhoa|11848|ras homolog gene family, member A
mm9_v1_chr5_+_34892224_34892336	16.8059	RUNX1..3.p2	AK143548|Sh3bp2|24055|SH3-domain binding protein 2	NM_001145859|Sh3bp2|24055|SH3-domain binding protein 2	BC085497|Sh3bp2|24055|SH3-domain binding protein 2	NM_001136088|Sh3bp2|24055|SH3-domain binding protein 2
mm9_v1_chr11_-_82834223_82834322	16.7754	RUNX1..3.p2	BC152549|Slfn8|276950|schlafen 8	NM_001167743|Slfn8|276950|schlafen 8	AY261799|Slfn8|276950|schlafen 8	AY261798|Slfn8|276950|schlafen 8	NM_181545|Slfn8|276950|schlafen 8
mm9_v1_chr6_-_87483228_87483252	16.4843	RUNX1..3.p2	AK169897|Arhgap25|232201|Rho GTPase activating protein 25	NM_001037727|Arhgap25|232201|Rho GTPase activating protein 25	AK159598|Arhgap25|232201|Rho GTPase activating protein 25	AK159941|Arhgap25|232201|Rho GTPase activating protein 25
mm9_v1_chr1_+_16678513_16678526	16.4377	RUNX1..3.p2	AK019283|Ly96|17087|lymphocyte antigen 96
mm9_v1_chr13_+_55471165_55471252	16.3023	RUNX1..3.p2	AK154944|Rgs14|51791|regulator of G-protein signaling 14	U85055|Rgs14|51791|regulator of G-protein signaling 14
mm9_v1_chr17_+_33692639_33692778	16.2554	RUNX1..3.p2	NM_053214|Myo1f|17916|myosin IF	BC046502|Myo1f|17916|myosin IF	AK153908|Myo1f|17916|myosin IF	X97650|Myo1f|17916|myosin IF	AK158333|Myo1f|17916|myosin IF
mm9_v1_chr8_+_28370796_28370880	16.1989	RUNX1..3.p2	NM_007918|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK167836|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	U28656|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	BC002045|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK170031|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK169979|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK013033|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1
mm9_v1_chr19_+_4214263_4214360	16.189	RUNX1..3.p2	AK137396|Clcf1|56708|cardiotrophin-like cytokine factor 1	AK166218|Clcf1|56708|cardiotrophin-like cytokine factor 1
mm9_v1_chr14_-_56880985_56881096	16.1261	RUNX1..3.p2	CT010272|Gzmb|14939|granzyme B	M12302|Gzmb|14939|granzyme B	AK167770|Gzmb|14939|granzyme B	AK157856|Gzmb|14939|granzyme B	BC002085|Gzmb|14939|granzyme B	NM_013542|Gzmb|14939|granzyme B	X04072|Gzmb|14939|granzyme B
mm9_v1_chr12_+_105474449_105474475	15.9873	RUNX1..3.p2	BC002065|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	M64085|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G
mm9_v1_chr2_+_32576591_32576654	15.6852	RUNX1..3.p2	AB043953|Sh2d3c|27387|SH2 domain containing 3C	NM_013781|Sh2d3c|27387|SH2 domain containing 3C	BC113203|Sh2d3c|27387|SH2 domain containing 3C	AF168364|Sh2d3c|27387|SH2 domain containing 3C	AK155165|Sh2d3c|27387|SH2 domain containing 3C	AK172072|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr2_-_73323746_73323842	15.6407	RUNX1..3.p2	AK031046|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr10_+_79482419_79482458	15.6136	RUNX1..3.p2	BC053750|Hmha1|70719|histocompatibility (minor) HA-1	NM_027521|Hmha1|70719|histocompatibility (minor) HA-1	AK044860|Hmha1|70719|histocompatibility (minor) HA-1
mm9_v1_chr1_-_196957694_196957780	15.5885	RUNX1..3.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr19_-_6932673_6932702	15.542	RUNX1..3.p2	BC151001|Ccdc88b|78317|coiled-coil domain containing 88B	BC151009|Ccdc88b|78317|coiled-coil domain containing 88B	BC157946|Ccdc88b|78317|coiled-coil domain containing 88B	NM_001081291|Ccdc88b|78317|coiled-coil domain containing 88B
mm9_v1_chr5_+_65522325_65522469	15.4764	RUNX1..3.p2	BC057606|Klhl5|71778|kelch-like 5 (Drosophila)	NM_175174|Klhl5|71778|kelch-like 5 (Drosophila)
mm9_v1_chr2_-_60590923_60591029	15.446	RUNX1..3.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr7_+_129776837_129777102	15.3954	RUNX1..3.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr1_+_173489323_173489455	15.2423	RUNX1..3.p2	AK089530|Cd244|18106|CD244 natural killer cell receptor 2B4	AK171544|Cd244|18106|CD244 natural killer cell receptor 2B4	NM_018729|Cd244|18106|CD244 natural killer cell receptor 2B4	AK170167|Cd244|18106|CD244 natural killer cell receptor 2B4	AF082803|Cd244|18106|CD244 natural killer cell receptor 2B4	L19057|Cd244|18106|CD244 natural killer cell receptor 2B4	AF184208|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234830|Cd244|18106|CD244 natural killer cell receptor 2B4	AK137505|Cd244|18106|CD244 natural killer cell receptor 2B4	AK155548|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234831|Cd244|18106|CD244 natural killer cell receptor 2B4	BC145067|Cd244|18106|CD244 natural killer cell receptor 2B4	BC150692|LOC677008|677008|natural killer cell receptor 2B4-like	AB196800|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196801|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196802|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196803|Cd244|18106|CD244 natural killer cell receptor 2B4
mm9_v1_chr19_+_9026020_9026327	15.1718	RUNX1..3.p2	AK199642|Mta2|23942|metastasis-associated gene family, member 2	AK219174|Mta2|23942|metastasis-associated gene family, member 2	AK195366|Mta2|23942|metastasis-associated gene family, member 2	AK209683|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr9_-_57110250_57110427	15.1316	RUNX1..3.p2	BC150963|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	BC150965|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	BC118527|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK006055|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK145074|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK155015|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK029230|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK031730|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK044396|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK155487|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK165963|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	NM_028820|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK080676|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK169617|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene
mm9_v1_chr4_-_46417054_46417104	15.1235	RUNX1..3.p2	AF269248|Hemgn|93966|hemogen	NM_053149|Hemgn|93966|hemogen	AK171906|Hemgn|93966|hemogen
mm9_v1_chrX_+_104344265_104344265	15.0563	RUNX1..3.p2	NM_001122596|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chrX_+_7156801_7156818	15.02	RUNX1..3.p2	AK157447|Foxp3|20371|forkhead box P3	DQ387959|Foxp3|20371|forkhead box P3	AF277992|Foxp3|20371|forkhead box P3	NM_054039|Foxp3|20371|forkhead box P3
mm9_v1_chr1_+_16678536_16678588	14.9273	RUNX1..3.p2	AB018550|Ly96|17087|lymphocyte antigen 96	NM_001159711|Ly96|17087|lymphocyte antigen 96	NM_016923|Ly96|17087|lymphocyte antigen 96	BC116785|Ly96|17087|lymphocyte antigen 96	AF168120|Ly96|17087|lymphocyte antigen 96	AY641431|Ly96|17087|lymphocyte antigen 96
mm9_v1_chr18_+_54113094_54113152	14.8759	RUNX1..3.p2	AJ279839|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr13_+_55471092_55471131	14.832	RUNX1..3.p2	NM_016758|Rgs14|51791|regulator of G-protein signaling 14	BC030321|Rgs14|51791|regulator of G-protein signaling 14
mm9_v1_chr12_+_105452740_105452842	14.7964	RUNX1..3.p2	BC119537|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK149697|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK150157|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK156086|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132647|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132649|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	NM_001168294|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001168295|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_009251|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK156462|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	BC049975|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK138954|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001033335|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F
mm9_v1_chr15_-_5058532_5058532	14.7272	RUNX1..3.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr16_+_57353389_57353389	14.5484	RUNX1..3.p2	AK146705|Filip1l|78749|filamin A interacting protein 1-like	NM_001040397|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr10_-_116719364_116719380	14.4705	RUNX1..3.p2	AK159276|Lyz2|17105|lysozyme 2
mm9_v1_chr13_-_37142112_37142112	14.2898	RUNX1..3.p2	AK030914|F13a1|74145|coagulation factor XIII, A1 subunit	NM_001166391|F13a1|74145|coagulation factor XIII, A1 subunit
mm9_v1_chr11_-_115884712_115884736	14.2389	RUNX1..3.p2	AK213191|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr10_+_66648458_66648510	14.2114	RUNX1..3.p2	AK087621|Jmjd1c|108829|jumonji domain containing 1C	AK170460|Jmjd1c|108829|jumonji domain containing 1C	AK135461|Jmjd1c|108829|jumonji domain containing 1C	AK085500|Jmjd1c|108829|jumonji domain containing 1C	AK133016|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr6_+_57531124_57531158	14.1851	RUNX1..3.p2	AK017888|Herc6|67138|hect domain and RLD 6
mm9_v1_chr10_+_28388165_28388438	13.9728	RUNX1..3.p2	AK041386|Themis|210757|thymocyte selection associated	AK088136|Themis|210757|thymocyte selection associated	AK089077|Themis|210757|thymocyte selection associated	NM_178666|Themis|210757|thymocyte selection associated	AK040594|Themis|210757|thymocyte selection associated	AK041622|Themis|210757|thymocyte selection associated	AK138701|Themis|210757|thymocyte selection associated	AK041562|Themis|210757|thymocyte selection associated	BC125486|Themis|210757|thymocyte selection associated	BC125488|Themis|210757|thymocyte selection associated	AB509340|Themis|210757|thymocyte selection associated	AK169558|Themis|210757|thymocyte selection associated
mm9_v1_chr4_+_63221260_63221393	13.8447	RUNX1..3.p2	BC023748|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK031016|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	NM_144905|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene
mm9_v1_chr1_-_175157322_175157359	13.8183	RUNX1..3.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr11_-_16908631_16908720	13.7556	RUNX1..3.p2	AK151460|Plek|56193|pleckstrin	AK152501|Plek|56193|pleckstrin	AK153109|Plek|56193|pleckstrin	BC066185|Plek|56193|pleckstrin	AF303745|Plek|56193|pleckstrin	AK033872|Plek|56193|pleckstrin	AK138831|Plek|56193|pleckstrin	AK050340|Plek|56193|pleckstrin	AK075810|Plek|56193|pleckstrin	AF181829|Plek|56193|pleckstrin	AF073294|Plek|56193|pleckstrin	AK156235|Plek|56193|pleckstrin	NM_019549|Plek|56193|pleckstrin
mm9_v1_chr5_-_39267928_39268050	13.7197	RUNX1..3.p2	BC125637|Clnk|27278|cytokine-dependent hematopoietic cell linker	BC125639|Clnk|27278|cytokine-dependent hematopoietic cell linker	AF187819|Clnk|27278|cytokine-dependent hematopoietic cell linker	NM_013748|Clnk|27278|cytokine-dependent hematopoietic cell linker	AB021220|Clnk|27278|cytokine-dependent hematopoietic cell linker
mm9_v1_chr6_-_87740264_87740322	13.5384	RUNX1..3.p2	AK050098|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr6_+_17616617_17616660	13.5249	RUNX1..3.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr6_+_17699145_17699592	13.469	RUNX1..3.p2	AK079107|St7|64213|suppression of tumorigenicity 7	AK132103|St7|64213|suppression of tumorigenicity 7	AK151550|St7|64213|suppression of tumorigenicity 7	NM_001083315|St7|64213|suppression of tumorigenicity 7	NM_022332|St7|64213|suppression of tumorigenicity 7	BC108418|St7|64213|suppression of tumorigenicity 7	AF234884|St7|64213|suppression of tumorigenicity 7	AF234885|St7|64213|suppression of tumorigenicity 7	AY007794|St7|64213|suppression of tumorigenicity 7	AY007795|St7|64213|suppression of tumorigenicity 7	AK036248|St7|64213|suppression of tumorigenicity 7	BC060630|St7|64213|suppression of tumorigenicity 7	BC051429|St7|64213|suppression of tumorigenicity 7	AY551821|St7|64213|suppression of tumorigenicity 7	AY551822|St7|64213|suppression of tumorigenicity 7	CT010245|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr9_+_5298516_5298702	13.3928	RUNX1..3.p2	BC008152|Casp1|12362|caspase 1	NM_009807|Casp1|12362|caspase 1	L28095|Casp1|12362|caspase 1	AK132826|Casp1|12362|caspase 1	AK163069|Casp1|12362|caspase 1
mm9_v1_chr1_+_174405490_174405627	13.3104	RUNX1..3.p2	NM_029612|Slamf9|98365|SLAM family member 9	AK090041|Slamf9|98365|SLAM family member 9	AK009505|Slamf9|98365|SLAM family member 9	BC019477|Slamf9|98365|SLAM family member 9	AB196824|Slamf9|98365|SLAM family member 9	AB196825|Slamf9|98365|SLAM family member 9	AB196826|Slamf9|98365|SLAM family member 9	AB196827|Slamf9|98365|SLAM family member 9
mm9_v1_chr8_-_112102946_112102953	13.2318	RUNX1..3.p2	BC138872|Hp|15439|haptoglobin	M96827|Hp|15439|haptoglobin
mm9_v1_chr5_-_65351226_65351309	13.1728	RUNX1..3.p2	AK137502|Tlr6|21899|toll-like receptor 6	NM_011604|Tlr6|21899|toll-like receptor 6	BC055366|Tlr6|21899|toll-like receptor 6	AK154253|Tlr6|21899|toll-like receptor 6
mm9_v1_chr12_-_32893074_32893513	13.1237	RUNX1..3.p2	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr5_+_116005777_116005859	13.0413	RUNX1..3.p2	AK194144|Pxn|19303|paxillin	AK205143|Pxn|19303|paxillin	AK219507|Pxn|19303|paxillin
mm9_v1_chr13_+_55701256_55701508	13.0204	RUNX1..3.p2	BC055703|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK050684|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK146855|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK171600|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	BC027195|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	NM_146045|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK141739|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
mm9_v1_chr3_-_58329346_58329433	12.9755	RUNX1..3.p2	AK178735|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK179107|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK185536|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK190535|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK194381|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK195463|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK209611|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr7_-_113102453_113102483	12.9733	RUNX1..3.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113358823_113358853	12.9733	RUNX1..3.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr10_+_79321979_79322100	12.9613	RUNX1..3.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr19_-_4305954_4306041	12.9551	RUNX1..3.p2	BC053922|Adrbk1|110355|adrenergic receptor kinase, beta 1	NM_130863|Adrbk1|110355|adrenergic receptor kinase, beta 1	BC003196|Adrbk1|110355|adrenergic receptor kinase, beta 1	AF333028|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr6_-_123239886_123239943	12.9243	RUNX1..3.p2	AK152333|Clec4e|56619|C-type lectin domain family 4, member e	AK156437|Clec4e|56619|C-type lectin domain family 4, member e	AK036493|Clec4e|56619|C-type lectin domain family 4, member e	AK089286|Clec4e|56619|C-type lectin domain family 4, member e	AK150528|Clec4e|56619|C-type lectin domain family 4, member e	AK150899|Clec4e|56619|C-type lectin domain family 4, member e	AK151101|Clec4e|56619|C-type lectin domain family 4, member e	AK151912|Clec4e|56619|C-type lectin domain family 4, member e	AK153008|Clec4e|56619|C-type lectin domain family 4, member e	AK153308|Clec4e|56619|C-type lectin domain family 4, member e	AK155452|Clec4e|56619|C-type lectin domain family 4, member e	AK171103|Clec4e|56619|C-type lectin domain family 4, member e	AB024717|Clec4e|56619|C-type lectin domain family 4, member e	NM_019948|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr7_-_133727793_133727820	12.8406	RUNX1..3.p2	NM_001146311|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC047120|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr8_-_112103065_112103072	12.6319	RUNX1..3.p2	NM_017370|Hp|15439|haptoglobin
mm9_v1_chr4_-_129250806_129250884	12.5707	RUNX1..3.p2	M23192|Lck|16818|lymphocyte protein tyrosine kinase	BC011474|Lck|16818|lymphocyte protein tyrosine kinase	NM_001162433|Lck|16818|lymphocyte protein tyrosine kinase
mm9_v1_chr7_+_150190950_150190964	12.5422	RUNX1..3.p2	AY039000|Tspan32|27027|tetraspanin 32	NM_001128080|Tspan32|27027|tetraspanin 32	AK041748|Tspan32|27027|tetraspanin 32
mm9_v1_chr13_+_51740600_51740724	12.5244	RUNX1..3.p2	NM_025415|Cks2|66197|CDC28 protein kinase regulatory subunit 2	AK166688|Cks2|66197|CDC28 protein kinase regulatory subunit 2	AK002451|Cks2|66197|CDC28 protein kinase regulatory subunit 2	AK004163|Cks2|66197|CDC28 protein kinase regulatory subunit 2	BC022647|Cks2|66197|CDC28 protein kinase regulatory subunit 2	BC094919|Cks2|66197|CDC28 protein kinase regulatory subunit 2
mm9_v1_chr6_-_40535762_40535819	12.477	RUNX1..3.p2	BC104364|Clec5a|23845|C-type lectin domain family 5, member a	BC104365|Clec5a|23845|C-type lectin domain family 5, member a	AK036697|Clec5a|23845|C-type lectin domain family 5, member a	AF139769|Clec5a|23845|C-type lectin domain family 5, member a	AK046600|Clec5a|23845|C-type lectin domain family 5, member a	AK137482|Clec5a|23845|C-type lectin domain family 5, member a	NM_001038604|Clec5a|23845|C-type lectin domain family 5, member a	NM_021364|Clec5a|23845|C-type lectin domain family 5, member a	AK155409|Clec5a|23845|C-type lectin domain family 5, member a
mm9_v1_chr2_+_172219293_172219452	12.4334	RUNX1..3.p2	AK089450|Cass4|320664|Cas scaffolding protein family member 4	AK170726|Cass4|320664|Cas scaffolding protein family member 4	NM_001033538|Cass4|320664|Cas scaffolding protein family member 4	AK036419|Cass4|320664|Cas scaffolding protein family member 4	AK080960|Cass4|320664|Cas scaffolding protein family member 4	BC117858|Cass4|320664|Cas scaffolding protein family member 4	BC117859|Cass4|320664|Cas scaffolding protein family member 4	BC129976|Cass4|320664|Cas scaffolding protein family member 4	BC129975|Cass4|320664|Cas scaffolding protein family member 4	NM_001080820|Cass4|320664|Cas scaffolding protein family member 4
mm9_v1_chr4_-_118954780_118955048	12.4171	RUNX1..3.p2	AK213887|Ybx1|22608|Y box protein 1	AK208509|Ybx1|22608|Y box protein 1	AK212502|Ybx1|22608|Y box protein 1
mm9_v1_chr9_-_113563906_113564041	12.3877	RUNX1..3.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr9_+_108953672_108953687	12.3663	RUNX1..3.p2	AK090357|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chrX_-_71156567_71156646	12.2714	RUNX1..3.p2	AF443826|Arhgap4|171207|Rho GTPase activating protein 4	BC109001|Arhgap4|171207|Rho GTPase activating protein 4	BC109002|Arhgap4|171207|Rho GTPase activating protein 4	AY183124|Arhgap4|171207|Rho GTPase activating protein 4	AY183125|Arhgap4|171207|Rho GTPase activating protein 4	AY183126|Arhgap4|171207|Rho GTPase activating protein 4	AY183127|Arhgap4|171207|Rho GTPase activating protein 4	AY183128|Arhgap4|171207|Rho GTPase activating protein 4	AY183129|Arhgap4|171207|Rho GTPase activating protein 4	AY183130|Arhgap4|171207|Rho GTPase activating protein 4	AY183131|Arhgap4|171207|Rho GTPase activating protein 4	AY183132|Arhgap4|171207|Rho GTPase activating protein 4	AY183133|Arhgap4|171207|Rho GTPase activating protein 4	AK157294|Arhgap4|171207|Rho GTPase activating protein 4	AK169865|Arhgap4|171207|Rho GTPase activating protein 4	AK037344|Arhgap4|171207|Rho GTPase activating protein 4	NM_001162423|Arhgap4|171207|Rho GTPase activating protein 4	NM_001162424|Arhgap4|171207|Rho GTPase activating protein 4	NM_138630|Arhgap4|171207|Rho GTPase activating protein 4
mm9_v1_chr5_-_148211881_148212064	12.2073	RUNX1..3.p2	AK149292|Flt3|14255|FMS-like tyrosine kinase 3	AK045865|Flt3|14255|FMS-like tyrosine kinase 3	X59398|Flt3|14255|FMS-like tyrosine kinase 3	AK163640|Flt3|14255|FMS-like tyrosine kinase 3	NM_010229|Flt3|14255|FMS-like tyrosine kinase 3
mm9_v1_chr10_+_32803288_32803366	12.202	RUNX1..3.p2	NM_029726|Trdn|76757|triadin	AK009816|Trdn|76757|triadin	AF223415|Trdn|76757|triadin	AF223416|Trdn|76757|triadin	BC034343|Trdn|76757|triadin	AF223417|Trdn|76757|triadin
mm9_v1_chr10_-_124765435_124765590	12.1224	RUNX1..3.p2	BC117803|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC117804|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC126960|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC089606|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	AF058054|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	NM_011391|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm9_v1_chr1_-_195027508_195027739	12.0916	RUNX1..3.p2	AK036608|Traf3ip3|215243|TRAF3 interacting protein 3	BC036561|Traf3ip3|215243|TRAF3 interacting protein 3	AK031400|Traf3ip3|215243|TRAF3 interacting protein 3	AK080080|Traf3ip3|215243|TRAF3 interacting protein 3	AK041994|Traf3ip3|215243|TRAF3 interacting protein 3	NM_153137|Traf3ip3|215243|TRAF3 interacting protein 3
mm9_v1_chr4_-_46416895_46416973	12.0903	RUNX1..3.p2	AK077692|Hemgn|93966|hemogen	AY699986|Hemgn|93966|hemogen	AK156536|Hemgn|93966|hemogen	AK171890|Hemgn|93966|hemogen	AK172421|Hemgn|93966|hemogen
mm9_v1_chr16_+_44765848_44765938	12.0902	RUNX1..3.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chrX_+_104344792_104344792	12.0799	RUNX1..3.p2	NM_001122595|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr2_-_156712810_156712927	12.0604	RUNX1..3.p2	AK030877|Sla2|77799|Src-like-adaptor 2	AK138709|Sla2|77799|Src-like-adaptor 2	NM_029983|Sla2|77799|Src-like-adaptor 2	AF434990|Sla2|77799|Src-like-adaptor 2	AF287467|Sla2|77799|Src-like-adaptor 2	BC052655|Sla2|77799|Src-like-adaptor 2	AK088672|Sla2|77799|Src-like-adaptor 2
mm9_v1_chr14_+_56590264_56590269	12.0351	RUNX1..3.p2	AF361939|Cma2|545055|chymase 2, mast cell	NM_001024714|Cma2|545055|chymase 2, mast cell	BC139236|Cma2|545055|chymase 2, mast cell	BC139237|Cma2|545055|chymase 2, mast cell
mm9_v1_chr8_-_112102961_112102972	12.011	RUNX1..3.p2	AK159676|Hp|15439|haptoglobin	S67972|Hp|15439|haptoglobin	AK150430|Hp|15439|haptoglobin	AK150830|Hp|15439|haptoglobin	AK152295|Hp|15439|haptoglobin	AK152698|Hp|15439|haptoglobin
mm9_v1_chrX_-_71526939_71526996	11.9472	RUNX1..3.p2	DQ116784|Dnase1l1|69537|deoxyribonuclease 1-like 1	AK150242|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr17_+_4995073_4995073	11.944	RUNX1..3.p2	NM_001085355|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr6_+_48986625_48986740	11.9354	RUNX1..3.p2	AK044764|Gpnmb|93695|glycoprotein (transmembrane) nmb	AJ251685|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159908|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171347|Gpnmb|93695|glycoprotein (transmembrane) nmb	BC026375|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK076347|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK149700|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK150739|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159747|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171441|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171465|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK089272|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171474|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171618|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171608|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK079220|Gpnmb|93695|glycoprotein (transmembrane) nmb	AF322054|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK190718|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK192494|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK193667|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK202660|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK204559|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr11_-_117630476_117630499	11.8762	RUNX1..3.p2	AK183838|Tmc6|217353|transmembrane channel-like gene family 6
mm9_v1_chr9_+_108953692_108953725	11.8713	RUNX1..3.p2	AK088188|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr13_+_63116293_63116526	11.6036	RUNX1..3.p2	AK141931|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	NM_028079|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC141279|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AJ810420|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr11_+_75345164_75345232	11.5386	RUNX1..3.p2	AB120363|Slc43a2|215113|solute carrier family 43, member 2	BC042513|Slc43a2|215113|solute carrier family 43, member 2	NM_173388|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr2_+_156393681_156393681	11.5265	RUNX1..3.p2	
mm9_v1_chr5_-_148211857_148211870	11.4774	RUNX1..3.p2	BC109003|Flt3|14255|FMS-like tyrosine kinase 3	BC109004|Flt3|14255|FMS-like tyrosine kinase 3	M64689|Flt3|14255|FMS-like tyrosine kinase 3
mm9_v1_chr17_+_35958628_35958663	11.3717	RUNX1..3.p2	AK051003|Ier3|15937|immediate early response 3	AK170477|Ier3|15937|immediate early response 3	AK003466|Ier3|15937|immediate early response 3	BC006950|Ier3|15937|immediate early response 3	NM_133662|Ier3|15937|immediate early response 3	CT010247|Ier3|15937|immediate early response 3	CT010271|Ier3|15937|immediate early response 3
mm9_v1_chr19_+_4214369_4214416	11.2256	RUNX1..3.p2	AK170969|Clcf1|56708|cardiotrophin-like cytokine factor 1	AK166421|Clcf1|56708|cardiotrophin-like cytokine factor 1	AF176913|Clcf1|56708|cardiotrophin-like cytokine factor 1	NM_019952|Clcf1|56708|cardiotrophin-like cytokine factor 1	BC104258|Clcf1|56708|cardiotrophin-like cytokine factor 1	BC104259|Clcf1|56708|cardiotrophin-like cytokine factor 1
mm9_v1_chr7_+_148578056_148578149	11.1519	RUNX1..3.p2	NM_011528|Taldo1|21351|transaldolase 1	AK003092|Taldo1|21351|transaldolase 1	AK142030|Taldo1|21351|transaldolase 1	BC094277|Taldo1|21351|transaldolase 1	BC004754|Taldo1|21351|transaldolase 1	U63158|Taldo1|21351|transaldolase 1	U67611|Taldo1|21351|transaldolase 1	BC003970|Taldo1|21351|transaldolase 1
mm9_v1_chr8_-_73223897_73223993	11.1056	RUNX1..3.p2	AK135112|Gm11175|100303737|predicted gene 11175
mm9_v1_chr9_+_114640266_114640368	11.0644	RUNX1..3.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr7_-_148202779_148202790	11.0574	RUNX1..3.p2	BC104338|Ifitm6|213002|interferon induced transmembrane protein 6	BC104339|Ifitm6|213002|interferon induced transmembrane protein 6	NM_001033632|Ifitm6|213002|interferon induced transmembrane protein 6
mm9_v1_chr1_-_158604396_158604497	10.9787	RUNX1..3.p2	AK017908|Tor3a|30935|torsin family 3, member A	AK152243|Tor3a|30935|torsin family 3, member A	AK151390|Tor3a|30935|torsin family 3, member A	AJ299404|Tor3a|30935|torsin family 3, member A	AK172355|Tor3a|30935|torsin family 3, member A	BC025525|Tor3a|30935|torsin family 3, member A	BC071216|Tor3a|30935|torsin family 3, member A	AK151048|Tor3a|30935|torsin family 3, member A	AK153391|Tor3a|30935|torsin family 3, member A	BC052851|Tor3a|30935|torsin family 3, member A	AK007814|Tor3a|30935|torsin family 3, member A	AK170296|Tor3a|30935|torsin family 3, member A	AK152358|Tor3a|30935|torsin family 3, member A	AK152484|Tor3a|30935|torsin family 3, member A	NM_023141|Tor3a|30935|torsin family 3, member A	AK009693|Tor3a|30935|torsin family 3, member A
mm9_v1_chr19_-_5468482_5468500	10.9269	RUNX1..3.p2	AF014941|Ctsw|13041|cathepsin W	BC019136|Ctsw|13041|cathepsin W	AK088375|Ctsw|13041|cathepsin W	NM_009985|Ctsw|13041|cathepsin W	AK163626|Ctsw|13041|cathepsin W
mm9_v1_chr6_-_129573858_129573881	10.9176	RUNX1..3.p2	AF030313|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_001083322|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK170499|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr5_+_77694506_77694565	10.9164	RUNX1..3.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr19_+_8840883_8840977	10.8473	RUNX1..3.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_172949049_172949057	10.8265	RUNX1..3.p2	AK076532|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AK087863|Fcgr4|246256|Fc receptor, IgG, low affinity IV	NM_144559|Fcgr4|246256|Fc receptor, IgG, low affinity IV
mm9_v1_chr3_+_95466898_95466910	10.7435	RUNX1..3.p2	
mm9_v1_chr13_+_51740804_51740827	10.7374	RUNX1..3.p2	AK077690|Cks2|66197|CDC28 protein kinase regulatory subunit 2
mm9_v1_chr1_-_87633103_87633180	10.689	RUNX1..3.p2	BC052931|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041324|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041675|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	NM_177055|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene
mm9_v1_chrX_-_104035877_104035981	10.6617	RUNX1..3.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr5_+_115373398_115373414	10.6149	RUNX1..3.p2	BC032152|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AK149824|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AF426289|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AY057107|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AB067533|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AY089728|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr11_+_102294276_102294332	10.6105	RUNX1..3.p2	BC037047|Grn|14824|granulin	X62321|Grn|14824|granulin	AK196399|Grn|14824|granulin	AK205747|Grn|14824|granulin
mm9_v1_chr15_-_102062331_102062365	10.5246	RUNX1..3.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr1_+_40572206_40572292	10.3785	RUNX1..3.p2	AF077347|Il18rap|16174|interleukin 18 receptor accessory protein	BC120598|Il18rap|16174|interleukin 18 receptor accessory protein	BC120600|Il18rap|16174|interleukin 18 receptor accessory protein	NM_010553|Il18rap|16174|interleukin 18 receptor accessory protein	AK137541|Il18rap|16174|interleukin 18 receptor accessory protein	AK053176|Il18rap|16174|interleukin 18 receptor accessory protein
mm9_v1_chr10_-_17635007_17635085	10.3553	RUNX1..3.p2	BC094026|Heca|380629|headcase homolog (Drosophila)	AK134782|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr3_+_51465127_51465166	10.3546	RUNX1..3.p2	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr11_+_102297838_102297879	10.3468	RUNX1..3.p2	
mm9_v1_chr13_-_101086551_101086570	10.3422	RUNX1..3.p2	BC116347|Naip6|17952|NLR family, apoptosis inhibitory protein 6	BC141346|Naip6|17952|NLR family, apoptosis inhibitory protein 6	AF381772|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_010871|Naip6|17952|NLR family, apoptosis inhibitory protein 6
mm9_v1_chr1_+_132762248_132762329	10.2472	RUNX1..3.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr17_-_24646136_24646304	10.241	RUNX1..3.p2	
mm9_v1_chr1_+_172949069_172949110	10.2368	RUNX1..3.p2	BC027310|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AK170920|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AF499613|Fcgr4|246256|Fc receptor, IgG, low affinity IV	EU050648|Fcgr4|246256|Fc receptor, IgG, low affinity IV
mm9_v1_chr19_+_36453556_36453595	10.194	RUNX1..3.p2	AK017984|Pcgf5|76073|polycomb group ring finger 5	NM_029508|Pcgf5|76073|polycomb group ring finger 5	BC139258|Pcgf5|76073|polycomb group ring finger 5	BC139259|Pcgf5|76073|polycomb group ring finger 5	BC145590|Pcgf5|76073|polycomb group ring finger 5	BC145591|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr9_+_108417075_108417146	10.0498	RUNX1..3.p2	BC018274|Qars|97541|glutaminyl-tRNA synthetase	AK189247|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr15_-_102062309_102062327	10.0497	RUNX1..3.p2	M95632|Itgb7|16421|integrin beta 7	M95633|Itgb7|16421|integrin beta 7	M68903|Itgb7|16421|integrin beta 7
mm9_v1_chr1_-_175671849_175671956	10.0489	RUNX1..3.p2	BC150711|AI607873|226691|expressed sequence AI607873	AK054438|AI607873|226691|expressed sequence AI607873
mm9_v1_chr7_+_50606710_50606917	10.0438	RUNX1..3.p2	AK087658|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK155469|Siglec5|233186|sialic acid binding Ig-like lectin 5	AF293371|Siglec5|233186|sialic acid binding Ig-like lectin 5	NM_145581|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK146203|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145038|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145987|Siglec5|233186|sialic acid binding Ig-like lectin 5	AY210401|Siglec5|233186|sialic acid binding Ig-like lectin 5
mm9_v1_chr1_-_195068455_195068557	10.0088	RUNX1..3.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr3_+_51465095_51465114	9.99616	RUNX1..3.p2	NM_174995|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr17_+_35404109_35404141	9.91138	RUNX1..3.p2	
mm9_v1_chr6_+_38868942_38869113	9.89744	RUNX1..3.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr3_+_95039985_95040105	9.88525	RUNX1..3.p2	
mm9_v1_chr11_+_75345598_75345772	9.86997	RUNX1..3.p2	AK171104|Slc43a2|215113|solute carrier family 43, member 2	AK172685|Slc43a2|215113|solute carrier family 43, member 2	AK159144|Slc43a2|215113|solute carrier family 43, member 2	AK165721|Slc43a2|215113|solute carrier family 43, member 2	AK090207|Slc43a2|215113|solute carrier family 43, member 2	AK143773|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr7_-_148202806_148202810	9.861	RUNX1..3.p2	AK039626|Ifitm6|213002|interferon induced transmembrane protein 6
mm9_v1_chr2_-_155648591_155648734	9.76673	RUNX1..3.p2	AK198737|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr14_-_103379725_103379759	9.73269	RUNX1..3.p2	AK086988|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK032276|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr7_-_118089700_118089700	9.71417	RUNX1..3.p2	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr11_-_48877544_48877700	9.71106	RUNX1..3.p2	L38444|Tgtp2|100039796|T-cell specific GTPase 2	U15636|Tgtp1|21822|T-cell specific GTPase 1	BC034256|Tgtp1|21822|T-cell specific GTPase 1	BC085259|Tgtp1|21822|T-cell specific GTPase 1	BC093522|Tgtp1|21822|T-cell specific GTPase 1
mm9_v1_chr1_+_40522814_40522850	9.69048	RUNX1..3.p2	AK087129|Il18r1|16182|interleukin 18 receptor 1	NM_008365|Il18r1|16182|interleukin 18 receptor 1	U43673|Il18r1|16182|interleukin 18 receptor 1
mm9_v1_chr7_+_29222465_29222512	9.6835	RUNX1..3.p2	AK002834|Gmfg|63986|glia maturation factor, gamma	AK014214|Gmfg|63986|glia maturation factor, gamma	NM_022024|Gmfg|63986|glia maturation factor, gamma	AF297221|Gmfg|63986|glia maturation factor, gamma	BC011488|Gmfg|63986|glia maturation factor, gamma
mm9_v1_chr3_+_5090275_5090294	9.60713	RUNX1..3.p2	
mm9_v1_chr17_+_34272535_34272615	9.59747	RUNX1..3.p2	AK160460|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC001996|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X62742|H2-DMa|14998|histocompatibility 2, class II, locus DMa	AK169900|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC049992|H2-DMa|14998|histocompatibility 2, class II, locus DMa	NM_010386|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35324|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35325|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35326|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35327|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35328|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90783|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90784|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90785|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90786|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90787|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90788|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90789|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90790|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90791|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90792|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90793|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90794|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90795|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90963|H2-DMa|14998|histocompatibility 2, class II, locus DMa
mm9_v1_chr1_-_132954105_132954147	9.51339	RUNX1..3.p2	BC024559|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr9_-_44226119_44226149	9.44516	RUNX1..3.p2	AK162606|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr15_+_78075220_78075493	9.44061	RUNX1..3.p2	NM_008677|Ncf4|17972|neutrophil cytosolic factor 4	AK150510|Ncf4|17972|neutrophil cytosolic factor 4	AB002665|Ncf4|17972|neutrophil cytosolic factor 4	U59488|Ncf4|17972|neutrophil cytosolic factor 4	BC025517|Ncf4|17972|neutrophil cytosolic factor 4	FJ168470|Ncf4|17972|neutrophil cytosolic factor 4	AK171315|Ncf4|17972|neutrophil cytosolic factor 4
mm9_v1_chr9_-_43951401_43951528	9.42044	RUNX1..3.p2	
mm9_v1_chr3_-_101091814_101091861	9.39396	RUNX1..3.p2	X06143|Cd2|12481|CD2 antigen	BC053731|Cd2|12481|CD2 antigen	M18934|Cd2|12481|CD2 antigen	AK138728|Cd2|12481|CD2 antigen	AF065906|Cd2|12481|CD2 antigen	AF065907|Cd2|12481|CD2 antigen	AF065908|Cd2|12481|CD2 antigen	AF065909|Cd2|12481|CD2 antigen	AF306543|Cd2|12481|CD2 antigen	NM_013486|Cd2|12481|CD2 antigen	Y00023|Cd2|12481|CD2 antigen
mm9_v1_chr12_-_27129497_27129520	9.33302	RUNX1..3.p2	AK151624|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK203254|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr16_-_15966921_15966936	9.30864	RUNX1..3.p2	BC069859|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr16_+_44867209_44867209	9.17564	RUNX1..3.p2	AY230198|Cd200r2|271375|Cd200 receptor 2	NM_206535|Cd200r2|271375|Cd200 receptor 2
mm9_v1_chr15_+_6529846_6529910	9.13437	RUNX1..3.p2	AK037454|Fyb|23880|FYN binding protein	AK038225|Fyb|23880|FYN binding protein	NM_011815|Fyb|23880|FYN binding protein	AF001863|Fyb|23880|FYN binding protein	AF061744|Fyb|23880|FYN binding protein	AK030905|Fyb|23880|FYN binding protein	AK172013|Fyb|23880|FYN binding protein	AK137907|Fyb|23880|FYN binding protein	BC141352|Fyb|23880|FYN binding protein	BC064102|Fyb|23880|FYN binding protein
mm9_v1_chr11_+_70452623_70452651	9.12132	RUNX1..3.p2	NM_010326|Gp1ba|14723|glycoprotein 1b, alpha polypeptide	BC137765|Gp1ba|14723|glycoprotein 1b, alpha polypeptide
mm9_v1_chr11_-_114995194_114995307	9.0629	RUNX1..3.p2	AB292061|Cd300lf|246746|CD300 antigen like family member F	AY457047|Cd300lf|246746|CD300 antigen like family member F	AK154273|Cd300lf|246746|CD300 antigen like family member F	AY214460|Cd300lf|246746|CD300 antigen like family member F	AF251703|Cd300lf|246746|CD300 antigen like family member F	BC057864|Cd300lf|246746|CD300 antigen like family member F	AK089465|Cd300lf|246746|CD300 antigen like family member F	AK155367|Cd300lf|246746|CD300 antigen like family member F	AK089313|Cd300lf|246746|CD300 antigen like family member F	NM_001169153|Cd300lf|246746|CD300 antigen like family member F	NM_145634|Cd300lf|246746|CD300 antigen like family member F
mm9_v1_chr11_+_82930294_82930379	9.04231	RUNX1..3.p2	AK138710|Slfn1|20555|schlafen 1	AF099972|Slfn1|20555|schlafen 1	NM_011407|Slfn1|20555|schlafen 1	BC052869|Slfn1|20555|schlafen 1
mm9_v1_chr11_-_98190774_98191090	9.03917	RUNX1..3.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr11_+_95703598_95703608	9.02882	RUNX1..3.p2	NM_023121|Gngt2|14710|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
mm9_v1_chr6_-_52114644_52114829	9.02409	RUNX1..3.p2	AB221621|Hoxa2|15399|homeobox A2	M93292|Hoxa2|15399|homeobox A2	BC117105|Hoxa2|15399|homeobox A2	BC117107|Hoxa2|15399|homeobox A2	BC027688|Hoxa2|15399|homeobox A2	M95599|Hoxa2|15399|homeobox A2	NM_010451|Hoxa2|15399|homeobox A2
mm9_v1_chr2_+_121276592_121276724	8.98912	RUNX1..3.p2	AK150949|Serf2|378702|small EDRK-rich factor 2	AK151555|Serf2|378702|small EDRK-rich factor 2	AK028362|Serf2|378702|small EDRK-rich factor 2	AK177258|Serf2|378702|small EDRK-rich factor 2	AK181677|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr4_-_93001912_93002119	8.97769	RUNX1..3.p2	AK008612|Tusc1|69136|tumor suppressor candidate 1
mm9_v1_chr17_+_8437922_8437922	8.95724	RUNX1..3.p2	AK154413|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_001190338|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr4_-_93002201_93002224	8.91917	RUNX1..3.p2	AY546089|Tusc1|69136|tumor suppressor candidate 1	NM_026954|Tusc1|69136|tumor suppressor candidate 1
mm9_v1_chr13_+_81796756_81796839	8.89387	RUNX1..3.p2	BC003322|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	NM_030257|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	AK029514|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3
mm9_v1_chr6_+_57530968_57531087	8.89342	RUNX1..3.p2	NM_025992|Herc6|67138|hect domain and RLD 6	AK149648|Herc6|67138|hect domain and RLD 6	AK147960|Herc6|67138|hect domain and RLD 6	AK011047|Herc6|67138|hect domain and RLD 6
mm9_v1_chr19_+_46379216_46379289	8.88108	RUNX1..3.p2	NM_001177369|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK144994|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK137680|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK148160|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK150012|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AF155372|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
mm9_v1_chr4_-_141154138_141154141	8.87422	RUNX1..3.p2	AK010660|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr10_+_126437764_126437859	8.81608	RUNX1..3.p2	NM_009635|Avil|11567|advillin	AF059486|Avil|11567|advillin	AK154851|Avil|11567|advillin	AK155900|Avil|11567|advillin	AK170878|Avil|11567|advillin	AK171324|Avil|11567|advillin	AK171319|Avil|11567|advillin	AF041448|Avil|11567|advillin	BC119222|Avil|11567|advillin	BC120545|Avil|11567|advillin
mm9_v1_chr3_-_108707417_108707441	8.81532	RUNX1..3.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr5_+_115373333_115373385	8.81506	RUNX1..3.p2	AK089111|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr11_-_48877704_48877713	8.80233	RUNX1..3.p2	AK088858|Tgtp2|100039796|T-cell specific GTPase 2	AK172580|Tgtp2|100039796|T-cell specific GTPase 2	NM_001145164|Tgtp2|100039796|T-cell specific GTPase 2
mm9_v1_chr5_+_86500770_86500862	8.76645	RUNX1..3.p2	AK162655|Stap1|56792|signal transducing adaptor family member 1	AK153661|Stap1|56792|signal transducing adaptor family member 1	BC057898|Stap1|56792|signal transducing adaptor family member 1	AK042475|Stap1|56792|signal transducing adaptor family member 1	BC145550|Stap1|56792|signal transducing adaptor family member 1	BC145828|Stap1|56792|signal transducing adaptor family member 1	BC145830|Stap1|56792|signal transducing adaptor family member 1	AK041474|Stap1|56792|signal transducing adaptor family member 1	NM_019992|Stap1|56792|signal transducing adaptor family member 1	AB036058|Stap1|56792|signal transducing adaptor family member 1
mm9_v1_chr11_+_81849074_81849163	8.76196	RUNX1..3.p2	AK150937|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153468|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153520|Ccl2|20296|chemokine (C-C motif) ligand 2	NM_011333|Ccl2|20296|chemokine (C-C motif) ligand 2	AK132590|Ccl2|20296|chemokine (C-C motif) ligand 2	AK151789|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153443|Ccl2|20296|chemokine (C-C motif) ligand 2	BC055070|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145867|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145869|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065929|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065930|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065931|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065932|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065933|Ccl2|20296|chemokine (C-C motif) ligand 2	CT010187|Ccl2|20296|chemokine (C-C motif) ligand 2
mm9_v1_chr4_-_147520124_147520240	8.73892	RUNX1..3.p2	
mm9_v1_chr7_-_52494453_52494466	8.73356	RUNX1..3.p2	AK154466|Cd37|12493|CD37 antigen
mm9_v1_chr11_-_48805585_48805759	8.73175	RUNX1..3.p2	L38444|Tgtp2|100039796|T-cell specific GTPase 2	U15636|Tgtp1|21822|T-cell specific GTPase 1	AK145236|Gm12185|620913|predicted gene 12185	BC034256|Tgtp1|21822|T-cell specific GTPase 1	BC085259|Tgtp1|21822|T-cell specific GTPase 1	BC093522|Tgtp1|21822|T-cell specific GTPase 1	AK089836|Tgtp1|21822|T-cell specific GTPase 1	AK163978|Tgtp1|21822|T-cell specific GTPase 1	AK172473|Tgtp1|21822|T-cell specific GTPase 1	AK172580|Tgtp2|100039796|T-cell specific GTPase 2	NM_011579|Tgtp1|21822|T-cell specific GTPase 1	NM_001145164|Tgtp2|100039796|T-cell specific GTPase 2	AK166353|Tgtp1|21822|T-cell specific GTPase 1
mm9_v1_chr2_-_155649645_155649731	8.68117	RUNX1..3.p2	AK212176|Eif6|16418|eukaryotic translation initiation factor 6	AK181580|Eif6|16418|eukaryotic translation initiation factor 6	AK177151|Eif6|16418|eukaryotic translation initiation factor 6	Y11460|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr3_-_54538938_54538996	8.4834	RUNX1..3.p2	AJ505005|Exosc8|69639|exosome component 8	AK009584|Exosc8|69639|exosome component 8	AK165758|Exosc8|69639|exosome component 8	BC004769|Exosc8|69639|exosome component 8
mm9_v1_chr18_-_9995729_9995838	8.46253	RUNX1..3.p2	AK206781|Usp14|59025|ubiquitin specific peptidase 14	AK209109|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chrX_+_34731239_34731452	8.40196	RUNX1..3.p2	AK146283|Rnf113a1|69942|ring finger protein 113A1	AK013178|Rnf113a1|69942|ring finger protein 113A1	BC024906|Rnf113a1|69942|ring finger protein 113A1	NM_153503|Rnf113a1|69942|ring finger protein 113A1
mm9_v1_chr10_+_126500607_126500768	8.37927	RUNX1..3.p2	BC046336|Cdk4|12567|cyclin-dependent kinase 4	NM_009870|Cdk4|12567|cyclin-dependent kinase 4	AK153465|Cdk4|12567|cyclin-dependent kinase 4	BC052694|Cdk4|12567|cyclin-dependent kinase 4	BC031599|Cdk4|12567|cyclin-dependent kinase 4	AK011871|Cdk4|12567|cyclin-dependent kinase 4	AK003804|Cdk4|12567|cyclin-dependent kinase 4	AK006918|Cdk4|12567|cyclin-dependent kinase 4	AK012064|Cdk4|12567|cyclin-dependent kinase 4	AK146107|Cdk4|12567|cyclin-dependent kinase 4	AK019380|Cdk4|12567|cyclin-dependent kinase 4	AK078440|Cdk4|12567|cyclin-dependent kinase 4	AK013400|Cdk4|12567|cyclin-dependent kinase 4	AK185090|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr17_+_33775000_33775095	8.37861	RUNX1..3.p2	NM_001002842|Pram1|378460|PML-RAR alpha-regulated adaptor molecule 1	AK169990|Pram1|378460|PML-RAR alpha-regulated adaptor molecule 1	AY665714|Pram1|378460|PML-RAR alpha-regulated adaptor molecule 1	BC141100|Pram1|378460|PML-RAR alpha-regulated adaptor molecule 1
mm9_v1_chr19_-_4175478_4175577	8.33779	RUNX1..3.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chr2_+_30199519_30199667	8.30099	RUNX1..3.p2	AK198439|Nup188|227699|nucleoporin 188
mm9_v1_chr13_+_89680240_89680277	8.29107	RUNX1..3.p2	AK032750|Hapln1|12950|hyaluronan and proteoglycan link protein 1	NM_013500|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr19_+_5647822_5648036	8.28012	RUNX1..3.p2	AK202240|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK203832|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr6_+_135312948_135312972	8.26957	RUNX1..3.p2	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr6_-_127075853_127076093	8.19811	RUNX1..3.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr11_+_20531941_20532003	8.1747	RUNX1..3.p2	AK146621|Sertad2|58172|SERTA domain containing 2	NM_001038625|Sertad2|58172|SERTA domain containing 2	AK146897|Sertad2|58172|SERTA domain containing 2	AK132846|Sertad2|58172|SERTA domain containing 2	AK142018|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr3_+_135128934_135128963	8.15445	RUNX1..3.p2	AK206793|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr5_-_138605998_138606089	8.14448	RUNX1..3.p2	
mm9_v1_chr4_-_118951578_118951709	8.13068	RUNX1..3.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr14_-_70577478_70577492	8.1265	RUNX1..3.p2	BC024556|Pdlim2|213019|PDZ and LIM domain 2	NM_145978|Pdlim2|213019|PDZ and LIM domain 2
mm9_v1_chr10_-_115922360_115922443	8.12368	RUNX1..3.p2	AK019295|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr3_-_53267127_53267244	8.09808	RUNX1..3.p2	AK133986|Nhlrc3|212114|NHL repeat containing 3	BC087903|Nhlrc3|212114|NHL repeat containing 3	BC107356|Nhlrc3|212114|NHL repeat containing 3	AK029465|Nhlrc3|212114|NHL repeat containing 3	AK033167|Nhlrc3|212114|NHL repeat containing 3	NM_172501|Nhlrc3|212114|NHL repeat containing 3	AK162824|Nhlrc3|212114|NHL repeat containing 3	AK220477|Nhlrc3|212114|NHL repeat containing 3
mm9_v1_chr6_-_52176102_52176188	7.98494	RUNX1..3.p2	AB221551|Hoxa9|15405|homeobox A9	BC055059|Hoxa9|15405|homeobox A9
mm9_v1_chr1_+_154613622_154613679	7.94582	RUNX1..3.p2	NM_026369|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr9_-_44226073_44226112	7.93719	RUNX1..3.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr13_+_103483611_103483765	7.87352	RUNX1..3.p2	NM_008533|Cd180|17079|CD180 antigen	AK089613|Cd180|17079|CD180 antigen	AK089255|Cd180|17079|CD180 antigen	AK156548|Cd180|17079|CD180 antigen	D37797|Cd180|17079|CD180 antigen
mm9_v1_chr11_+_114751354_114751532	7.83839	RUNX1..3.p2	AK045869|Cd300a|217303|CD300A antigen	NM_170758|Cd300a|217303|CD300A antigen	BC139296|Cd300a|217303|CD300A antigen	BC139297|Cd300a|217303|CD300A antigen	AB095675|Cd300a|217303|CD300A antigen
mm9_v1_chr4_-_63522069_63522317	7.83705	RUNX1..3.p2	AK157270|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	L09754|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117093|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117097|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	AK030916|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	NM_009403|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8
mm9_v1_chrX_-_71527052_71527074	7.83173	RUNX1..3.p2	AK009174|Dnase1l1|69537|deoxyribonuclease 1-like 1	NM_027109|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr4_-_149377238_149377303	7.81098	RUNX1..3.p2	BC042677|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK159373|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK172249|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr18_+_24364442_24364497	7.79064	RUNX1..3.p2	AK083391|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	NM_001160404|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm9_v1_chr4_-_86314560_86314608	7.76625	RUNX1..3.p2	AK179029|Plin2|11520|perilipin 2	AY035850|Plin2|11520|perilipin 2	AY035851|Plin2|11520|perilipin 2
mm9_v1_chr1_-_175842977_175843178	7.70307	RUNX1..3.p2	BC132314|Mnda|381308|myeloid cell nuclear differentiation antigen	BC132316|Mnda|381308|myeloid cell nuclear differentiation antigen	BC145397|Mnda|381308|myeloid cell nuclear differentiation antigen	BC010546|Ifi204|15951|interferon activated gene 204	M74123|Mnda|381308|myeloid cell nuclear differentiation antigen	S62227|Mnda|381308|myeloid cell nuclear differentiation antigen	AK152683|Mnda|381308|myeloid cell nuclear differentiation antigen	AK152278|Mnda|381308|myeloid cell nuclear differentiation antigen	M31419|Ifi204|15951|interferon activated gene 204	AK152786|Mnda|381308|myeloid cell nuclear differentiation antigen	NM_001033450|Mnda|381308|myeloid cell nuclear differentiation antigen	AK080485|Mnda|381308|myeloid cell nuclear differentiation antigen	AK166217|Mnda|381308|myeloid cell nuclear differentiation antigen
mm9_v1_chrX_-_163701719_163701737	7.61843	RUNX1..3.p2	BC132054|Tlr8|170744|toll-like receptor 8	NM_133212|Tlr8|170744|toll-like receptor 8	AY035890|Tlr8|170744|toll-like receptor 8
mm9_v1_chr5_+_150076605_150076688	7.60984	RUNX1..3.p2	AK004002|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	BC026209|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	NM_009663|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	AK075967|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	M96554|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein
mm9_v1_chr9_-_119886359_119886488	7.60684	RUNX1..3.p2	AB091687|Csrnp1|215418|cysteine-serine-rich nuclear protein 1	AK171658|Csrnp1|215418|cysteine-serine-rich nuclear protein 1
mm9_v1_chr11_+_72774670_72774671	7.56595	RUNX1..3.p2	AK155904|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	NM_001163336|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	NM_001163337|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	NM_016745|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	AK089487|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous
mm9_v1_chr10_+_79479416_79479491	7.56374	RUNX1..3.p2	AK159194|Hmha1|70719|histocompatibility (minor) HA-1	NM_001142701|Hmha1|70719|histocompatibility (minor) HA-1	AK170262|Hmha1|70719|histocompatibility (minor) HA-1	AK171304|Hmha1|70719|histocompatibility (minor) HA-1	AK159474|Hmha1|70719|histocompatibility (minor) HA-1
mm9_v1_chr16_-_16864077_16864077	7.50815	RUNX1..3.p2	AK137514|Igll1|16136|immunoglobulin lambda-like polypeptide 1	AK137552|Igll1|16136|immunoglobulin lambda-like polypeptide 1	NM_001190325|Igll1|16136|immunoglobulin lambda-like polypeptide 1
mm9_v1_chr13_+_20886162_20886262	7.50781	RUNX1..3.p2	AK171572|Aoah|27052|acyloxyacyl hydrolase	BC150767|Aoah|27052|acyloxyacyl hydrolase	CT010242|Aoah|27052|acyloxyacyl hydrolase
mm9_v1_chr1_+_74314377_74314414	7.50403	RUNX1..3.p2	AK213157|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chrX_-_100678555_100678592	7.50166	RUNX1..3.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr5_+_115373246_115373254	7.501	RUNX1..3.p2	AK078690|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	NM_145209|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr17_-_31334690_31334693	7.48897	RUNX1..3.p2	BC112375|Tmprss3|140765|transmembrane protease, serine 3	AJ300738|Tmprss3|140765|transmembrane protease, serine 3	NM_080727|Tmprss3|140765|transmembrane protease, serine 3
mm9_v1_chr7_-_26506741_26506878	7.47299	RUNX1..3.p2	
mm9_v1_chr8_-_49075838_49075874	7.47067	RUNX1..3.p2	AK147944|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr14_-_59984246_59984326	7.46612	RUNX1..3.p2	BC145673|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	BC110663|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	AK156583|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	NM_199015|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed
mm9_v1_chr16_-_55843956_55843970	7.38313	RUNX1..3.p2	AK034283|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr16_-_17132372_17132480	7.38282	RUNX1..3.p2	AB043006|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC023290|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053425|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053438|Sdf2l1|64136|stromal cell-derived factor 2-like 1	NM_022324|Sdf2l1|64136|stromal cell-derived factor 2-like 1
mm9_v1_chr6_+_149257918_149258112	7.36732	RUNX1..3.p2	NM_026054|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK013408|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK017376|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK220403|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031989|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031797|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139435|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139436|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031526|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK079405|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene
mm9_v1_chr19_+_5568045_5568150	7.36517	RUNX1..3.p2	AK144121|Gm962|381201|predicted gene 962	NM_001033448|Gm962|381201|predicted gene 962	BC147482|Gm962|381201|predicted gene 962
mm9_v1_chr1_+_36364557_36364660	7.34321	RUNX1..3.p2	NM_001172205|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_001172206|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_145996|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK029237|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK085015|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK149839|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156376|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156622|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156934|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK157607|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK150170|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK155555|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	BC027152|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)
mm9_v1_chr4_-_147808800_147808920	7.29063	RUNX1..3.p2	
mm9_v1_chr1_-_195090178_195090242	7.24937	RUNX1..3.p2	BC132364|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	BC138780|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	BC145415|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_008288|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	X83202|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr11_+_116704983_116705004	7.24902	RUNX1..3.p2	AK003450|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK160133|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene
mm9_v1_chr18_+_61847568_61847591	7.23328	RUNX1..3.p2	AK003506|Il17b|56069|interleukin 17B	AF184970|Il17b|56069|interleukin 17B	AF218726|Il17b|56069|interleukin 17B	BC002271|Il17b|56069|interleukin 17B	NM_019508|Il17b|56069|interleukin 17B	AF250308|Il17b|56069|interleukin 17B
mm9_v1_chr11_+_117193738_117193767	7.22293	RUNX1..3.p2	AK164581|Sept9|53860|septin 9	AK031757|Sept9|53860|septin 9
mm9_v1_chr9_-_65427840_65427883	7.15179	RUNX1..3.p2	BC028908|Plekho2|102595|pleckstrin homology domain containing, family O member 2	NM_153119|Plekho2|102595|pleckstrin homology domain containing, family O member 2	AK170479|Plekho2|102595|pleckstrin homology domain containing, family O member 2	AK028069|Plekho2|102595|pleckstrin homology domain containing, family O member 2
mm9_v1_chr11_-_106646226_106646242	7.15032	RUNX1..3.p2	AK013106|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr13_-_108516475_108516490	7.13562	RUNX1..3.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr9_-_70782366_70782427	7.10462	RUNX1..3.p2	AY228765|Lipc|15450|lipase, hepatic	X58426|Lipc|15450|lipase, hepatic	BC094050|Lipc|15450|lipase, hepatic
mm9_v1_chr1_+_140864297_140864301	7.0819	RUNX1..3.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr13_+_37437194_37437308	7.04591	RUNX1..3.p2	AB007599|Ly86|17084|lymphocyte antigen 86	NM_010745|Ly86|17084|lymphocyte antigen 86	AK027929|Ly86|17084|lymphocyte antigen 86	BC096414|Ly86|17084|lymphocyte antigen 86	BC065783|Ly86|17084|lymphocyte antigen 86
mm9_v1_chr9_-_70782614_70782614	7.02653	RUNX1..3.p2	BC021841|Lipc|15450|lipase, hepatic	NM_008280|Lipc|15450|lipase, hepatic
mm9_v1_chr6_+_135313010_135313048	6.97336	RUNX1..3.p2	AK158369|Emp1|13730|epithelial membrane protein 1	AK159752|Emp1|13730|epithelial membrane protein 1	AK171061|Emp1|13730|epithelial membrane protein 1	AK172607|Emp1|13730|epithelial membrane protein 1	AK157366|Emp1|13730|epithelial membrane protein 1	AK171675|Emp1|13730|epithelial membrane protein 1	AK172705|Emp1|13730|epithelial membrane protein 1	BC034257|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr11_-_69730589_69730837	6.94895	RUNX1..3.p2	AK207553|Eif5a|276770|eukaryotic translation initiation factor 5A	AK211666|Eif5a|276770|eukaryotic translation initiation factor 5A	AK217079|Eif5a|276770|eukaryotic translation initiation factor 5A	AK189636|Eif5a|276770|eukaryotic translation initiation factor 5A	AK201607|Eif5a|276770|eukaryotic translation initiation factor 5A	AK213375|Eif5a|276770|eukaryotic translation initiation factor 5A	AK218644|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr16_-_88826362_88826389	6.92177	RUNX1..3.p2	BC104263|Krtap14|23927|keratin associated protein 14	BC104262|Krtap14|23927|keratin associated protein 14	AF003691|Krtap14|23927|keratin associated protein 14	D85925|Krtap14|23927|keratin associated protein 14	NM_013707|Krtap14|23927|keratin associated protein 14
mm9_v1_chr11_+_117193732_117193733	6.89802	RUNX1..3.p2	
mm9_v1_chr2_-_89892475_89892478	6.89332	RUNX1..3.p2	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chr4_+_128688217_128688363	6.86464	RUNX1..3.p2	
mm9_v1_chr5_+_104631633_104631713	6.85025	RUNX1..3.p2	AK132177|Dmp1|13406|dentin matrix protein 1	AK157973|Dmp1|13406|dentin matrix protein 1	NM_016779|Dmp1|13406|dentin matrix protein 1	U65020|Dmp1|13406|dentin matrix protein 1	BC113753|Dmp1|13406|dentin matrix protein 1
mm9_v1_chr8_+_68142423_68142423	6.81641	RUNX1..3.p2	BC066008|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_175188|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr1_+_154613763_154613962	6.80414	RUNX1..3.p2	AK166335|Arpc5|67771|actin related protein 2/3 complex, subunit 5	BC060143|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166284|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166725|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166919|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK008097|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151656|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK152281|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159738|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011348|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011911|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017669|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK019149|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150443|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150703|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK153262|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK149756|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151654|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168264|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK087427|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151490|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159438|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK167916|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168986|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK191774|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK181325|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK187022|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK189385|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK208127|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK209531|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr16_+_17898729_17898806	6.79994	RUNX1..3.p2	NM_009436|Tssk2|22115|testis-specific serine kinase 2	BC061175|Tssk2|22115|testis-specific serine kinase 2	BC049618|Tssk2|22115|testis-specific serine kinase 2	AF019926|Tssk2|22115|testis-specific serine kinase 2
mm9_v1_chr14_+_56660959_56660977	6.7446	RUNX1..3.p2	AK133521|Mcpt2|17225|mast cell protease 2	AY007570|Mcpt2|17225|mast cell protease 2	NM_008571|Mcpt2|17225|mast cell protease 2	BC119248|Mcpt2|17225|mast cell protease 2	BC119250|Mcpt2|17225|mast cell protease 2	J05177|Mcpt2|17225|mast cell protease 2
mm9_v1_chr12_-_102137614_102137733	6.73675	RUNX1..3.p2	AK154292|Gm10431|100038679|predicted gene 10431	NM_001177674|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr2_+_84776809_84776813	6.70272	RUNX1..3.p2	NM_021398|Slc43a3|58207|solute carrier family 43, member 3
mm9_v1_chr13_-_51820743_51820812	6.68526	RUNX1..3.p2	U69535|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
mm9_v1_chr11_+_117193594_117193626	6.66422	RUNX1..3.p2	NM_001113488|Sept9|53860|septin 9
mm9_v1_chr14_-_51536045_51536047	6.53617	RUNX1..3.p2	AK207563|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr1_+_60965868_60966014	6.48176	RUNX1..3.p2	BC042741|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	NM_009843|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	AK138891|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	X05719|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	BC052683|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	AB097214|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4
mm9_v1_chr11_+_72774709_72774812	6.47197	RUNX1..3.p2	BC026147|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	BC017639|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	U49393|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	U49394|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous
mm9_v1_chr14_-_73762324_73762328	6.4675	RUNX1..3.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr14_-_58508974_58509153	6.45482	RUNX1..3.p2	AK020965|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AY668951|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170139|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK031184|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK139216|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK140182|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK049270|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK163174|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK017158|Zdhhc20|75965|zinc finger, DHHC domain containing 20	NM_029492|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK151840|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170017|Zdhhc20|75965|zinc finger, DHHC domain containing 20	BC019536|Zdhhc20|75965|zinc finger, DHHC domain containing 20
mm9_v1_chr6_-_69494873_69494938	6.44483	RUNX1..3.p2	J04610|Igkv4-57-1|384514|immunoglobulin kappa variable 4-57-1
mm9_v1_chr4_-_19849712_19849751	6.42913	RUNX1..3.p2	AY145896|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	NM_175406|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK075745|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr1_+_133535033_133535043	6.41365	RUNX1..3.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr16_-_32165509_32165642	6.37171	RUNX1..3.p2	AK084858|Lrrc33|224109|leucine rich repeat containing 33	AK088770|Lrrc33|224109|leucine rich repeat containing 33	AK128897|Lrrc33|224109|leucine rich repeat containing 33	NM_146069|Lrrc33|224109|leucine rich repeat containing 33	BC027411|Lrrc33|224109|leucine rich repeat containing 33	AK167934|Lrrc33|224109|leucine rich repeat containing 33	AK042502|Lrrc33|224109|leucine rich repeat containing 33
mm9_v1_chr3_+_95087190_95087293	6.3711	RUNX1..3.p2	
mm9_v1_chr7_-_106630812_106630831	6.34859	RUNX1..3.p2	U89414|Rps3|27050|ribosomal protein S3
mm9_v1_chr11_+_87476588_87476588	6.34343	RUNX1..3.p2	AK032782|Rnf43|207742|ring finger protein 43	NM_172448|Rnf43|207742|ring finger protein 43
mm9_v1_chr1_-_97564139_97564174	6.33843	RUNX1..3.p2	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr11_+_100488707_100488855	6.33306	RUNX1..3.p2	AK201688|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chr8_+_34807688_34807718	6.31935	RUNX1..3.p2	AK027984|Gsr|14782|glutathione reductase
mm9_v1_chr17_+_49574463_49574529	6.30316	RUNX1..3.p2	BC049914|Mocs1|56738|molybdenum cofactor synthesis 1
mm9_v1_chr5_-_141096711_141096848	6.29293	RUNX1..3.p2	AK019322|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr17_+_83750246_83750339	6.28249	RUNX1..3.p2	AK144604|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114361|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114362|Eml4|78798|echinoderm microtubule associated protein like 4	NM_199466|Eml4|78798|echinoderm microtubule associated protein like 4	BC067011|Eml4|78798|echinoderm microtubule associated protein like 4	BC070427|Eml4|78798|echinoderm microtubule associated protein like 4	BC065178|Eml4|78798|echinoderm microtubule associated protein like 4	BC066099|Eml4|78798|echinoderm microtubule associated protein like 4	BC079619|Eml4|78798|echinoderm microtubule associated protein like 4
mm9_v1_chr7_+_109378512_109378530	6.23101	RUNX1..3.p2	AK152420|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr12_+_10397567_10397637	6.22462	RUNX1..3.p2	NM_023697|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AF303831|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC092299|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC020094|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AK014097|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)
mm9_v1_chrX_-_46641384_46641392	6.21664	RUNX1..3.p2	AK077508|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK133956|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK137736|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK139897|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	BC025915|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr7_-_91763744_91763768	6.20918	RUNX1..3.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr17_+_8435390_8435390	6.18478	RUNX1..3.p2	AK089712|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_009835|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr19_+_7049425_7049555	6.13402	RUNX1..3.p2	AK141152|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	X97490|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC082545|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	NM_008889|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr2_+_11564418_11564614	6.12743	RUNX1..3.p2	NM_008367|Il2ra|16184|interleukin 2 receptor, alpha chain	AK037369|Il2ra|16184|interleukin 2 receptor, alpha chain	AK041350|Il2ra|16184|interleukin 2 receptor, alpha chain	AK088594|Il2ra|16184|interleukin 2 receptor, alpha chain	AK168113|Il2ra|16184|interleukin 2 receptor, alpha chain	AK171665|Il2ra|16184|interleukin 2 receptor, alpha chain	M30856|Il2ra|16184|interleukin 2 receptor, alpha chain	BC114437|Il2ra|16184|interleukin 2 receptor, alpha chain	K02891|Il2ra|16184|interleukin 2 receptor, alpha chain	M54934|Il2ra|16184|interleukin 2 receptor, alpha chain
mm9_v1_chr7_-_20262106_20262119	6.1061	RUNX1..3.p2	AK146468|Apoc2|11813|apolipoprotein C-II	Z15090|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr1_+_132762353_132762436	6.08296	RUNX1..3.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr9_-_37476762_37476806	6.05457	RUNX1..3.p2	AK036933|Panx3|208098|pannexin 3	BC052822|Panx3|208098|pannexin 3	AK028288|Panx3|208098|pannexin 3	AK014690|Panx3|208098|pannexin 3	NM_172454|Panx3|208098|pannexin 3
mm9_v1_chr3_+_127336055_127336062	6.03033	RUNX1..3.p2	AK143190|Neurog2|11924|neurogenin 2	BC055743|Neurog2|11924|neurogenin 2	NM_009718|Neurog2|11924|neurogenin 2
mm9_v1_chr11_+_116295406_116295422	5.95295	RUNX1..3.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr1_+_52065469_52065543	5.9244	RUNX1..3.p2	AK037598|Stat4|20849|signal transducer and activator of transcription 4	AK157083|Stat4|20849|signal transducer and activator of transcription 4	U06923|Stat4|20849|signal transducer and activator of transcription 4	BC052907|Stat4|20849|signal transducer and activator of transcription 4	BC098499|Stat4|20849|signal transducer and activator of transcription 4
mm9_v1_chr19_-_10904345_10904547	5.90563	RUNX1..3.p2	U12434|Cd6|12511|CD6 antigen	U35370|Cd6|12511|CD6 antigen	U37543|Cd6|12511|CD6 antigen	U37544|Cd6|12511|CD6 antigen	AK030822|Cd6|12511|CD6 antigen	AK088050|Cd6|12511|CD6 antigen	BC014294|Cd6|12511|CD6 antigen	AK030823|Cd6|12511|CD6 antigen	NM_001037801|Cd6|12511|CD6 antigen	NM_009852|Cd6|12511|CD6 antigen
mm9_v1_chr2_+_24242134_24242148	5.89543	RUNX1..3.p2	AK150238|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK155249|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK169859|Psd4|215632|pleckstrin and Sec7 domain containing 4
mm9_v1_chr13_-_96661704_96661910	5.89365	RUNX1..3.p2	BC094939|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC052916|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK080384|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK147360|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC150958|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK142813|Iqgap2|544963|IQ motif containing GTPase activating protein 2	NM_027711|Iqgap2|544963|IQ motif containing GTPase activating protein 2
mm9_v1_chr19_-_44144175_44144240	5.84869	RUNX1..3.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr7_-_135604669_135604859	5.84839	RUNX1..3.p2	AK012085|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	BC056227|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	U55861|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	BC010496|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr2_+_129949020_129949033	5.84701	RUNX1..3.p2	AK037229|Tgm6|241636|transglutaminase 6	AY159126|Tgm6|241636|transglutaminase 6	AY177606|Tgm6|241636|transglutaminase 6	NM_177726|Tgm6|241636|transglutaminase 6	BC112420|Tgm6|241636|transglutaminase 6	BC113796|Tgm6|241636|transglutaminase 6
mm9_v1_chr1_-_69732373_69732533	5.832	RUNX1..3.p2	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chr1_+_133558486_133558487	5.82496	RUNX1..3.p2	AK157907|Ctse|13034|cathepsin E	AK165242|Ctse|13034|cathepsin E
mm9_v1_chr15_-_36538691_36538736	5.80157	RUNX1..3.p2	AK152064|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC046233|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159703|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK044829|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160883|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160968|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161671|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK168466|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK089747|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK150839|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159733|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK005009|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK133196|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161123|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	NM_008774|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr13_-_56280161_56280245	5.74771	RUNX1..3.p2	AK036643|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_001168615|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_145976|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr7_+_52112742_52112902	5.74595	RUNX1..3.p2	AK159535|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK159770|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK160020|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AF129451|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr4_-_40800983_40800984	5.74381	RUNX1..3.p2	D00314|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr18_-_73975022_73975140	5.73368	RUNX1..3.p2	BC004709|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	NM_145494|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK043103|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK171157|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK042289|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK039906|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050933|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050980|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK077746|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK156403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK080403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK162126|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial
mm9_v1_chr8_-_72433344_72433376	5.71528	RUNX1..3.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr11_+_81859212_81859265	5.6908	RUNX1..3.p2	NM_013654|Ccl7|20306|chemokine (C-C motif) ligand 7	AK078827|Ccl7|20306|chemokine (C-C motif) ligand 7	BC061126|Ccl7|20306|chemokine (C-C motif) ligand 7	S71251|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128193|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128194|Ccl7|20306|chemokine (C-C motif) ligand 7	L04694|Ccl7|20306|chemokine (C-C motif) ligand 7	S50588|Ccl7|20306|chemokine (C-C motif) ligand 7	Z12297|Ccl7|20306|chemokine (C-C motif) ligand 7
mm9_v1_chr7_-_52965801_52965838	5.684	RUNX1..3.p2	AK198375|Sphk2|56632|sphingosine kinase 2	AK202851|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr5_+_115373272_115373294	5.68092	RUNX1..3.p2	AK150863|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AK165578|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr10_-_80129720_80129733	5.66408	RUNX1..3.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr9_+_44307218_44307218	5.66327	RUNX1..3.p2	AY296058|Bcl9l|80288|B-cell CLL/lymphoma 9-like	NM_030256|Bcl9l|80288|B-cell CLL/lymphoma 9-like
mm9_v1_chr11_+_98219687_98219740	5.65296	RUNX1..3.p2	NM_021547|Stard3|59045|START domain containing 3	X82457|Stard3|59045|START domain containing 3	AK041538|Stard3|59045|START domain containing 3	AK150166|Stard3|59045|START domain containing 3	AK150254|Stard3|59045|START domain containing 3
mm9_v1_chr10_-_14438019_14438019	5.63221	RUNX1..3.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr3_+_95086814_95087156	5.62862	RUNX1..3.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr19_+_5568016_5568024	5.56147	RUNX1..3.p2	AK171710|Gm962|381201|predicted gene 962
mm9_v1_chr1_+_154613692_154613762	5.56047	RUNX1..3.p2	AK159407|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017985|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr13_+_37917957_37918060	5.54153	RUNX1..3.p2	BC080680|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr18_-_35130489_35130501	5.53705	RUNX1..3.p2	
mm9_v1_chr7_-_31606540_31606666	5.52397	RUNX1..3.p2	AF545043|Ffar2|233079|free fatty acid receptor 2	NM_001168509|Ffar2|233079|free fatty acid receptor 2
mm9_v1_chr9_+_44134859_44135076	5.49919	RUNX1..3.p2	BC010474|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	NM_007875|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008246|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008317|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK164129|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	X65603|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm9_v1_chr1_-_158404299_158404465	5.49857	RUNX1..3.p2	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr11_-_102786433_102786439	5.49782	RUNX1..3.p2	NM_197959|Kif18b|70218|kinesin family member 18B
mm9_v1_chr5_+_123844794_123844938	5.48166	RUNX1..3.p2	AK047475|Mlxip|208104|MLX interacting protein	NM_133917|Mlxip|208104|MLX interacting protein	NM_177582|Mlxip|208104|MLX interacting protein	BC137770|Mlxip|208104|MLX interacting protein	AY968204|Mlxip|208104|MLX interacting protein
mm9_v1_chr16_+_25802001_25802145	5.47517	RUNX1..3.p2	AK048623|Trp63|22061|transformation related protein 63	BC092537|Trp63|22061|transformation related protein 63	NM_001127262|Trp63|22061|transformation related protein 63	NM_001127263|Trp63|22061|transformation related protein 63	NM_001127264|Trp63|22061|transformation related protein 63	NM_001127265|Trp63|22061|transformation related protein 63	NM_011641|Trp63|22061|transformation related protein 63	AK137253|Trp63|22061|transformation related protein 63	BC090649|Trp63|22061|transformation related protein 63	AB010152|Trp63|22061|transformation related protein 63	AF075437|Trp63|22061|transformation related protein 63	AF075438|Trp63|22061|transformation related protein 63	AF075439|Trp63|22061|transformation related protein 63
mm9_v1_chr7_-_106628404_106628486	5.47268	RUNX1..3.p2	AK197233|Rps3|27050|ribosomal protein S3	AK197426|Rps3|27050|ribosomal protein S3	AK201330|Rps3|27050|ribosomal protein S3	AK211385|Rps3|27050|ribosomal protein S3
mm9_v1_chr13_+_95645581_95645581	5.46452	RUNX1..3.p2	NM_011021|Otp|18420|orthopedia homolog (Drosophila)	Y10413|Otp|18420|orthopedia homolog (Drosophila)
mm9_v1_chr10_-_52058305_52058381	5.41821	RUNX1..3.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr7_+_52257572_52257687	5.41101	RUNX1..3.p2	
mm9_v1_chr11_-_120522148_120522225	5.39919	RUNX1..3.p2	AK019987|Notum|77583|notum pectinacetylesterase homolog (Drosophila)	NM_175263|Notum|77583|notum pectinacetylesterase homolog (Drosophila)
mm9_v1_chr11_-_54063400_54063400	5.39855	RUNX1..3.p2	AK053196|Csf2|12981|colony stimulating factor 2 (granulocyte-macrophage)	NM_009969|Csf2|12981|colony stimulating factor 2 (granulocyte-macrophage)
mm9_v1_chr10_+_75411056_75411076	5.38565	RUNX1..3.p2	AK008794|Vpreb3|22364|pre-B lymphocyte gene 3	NM_009514|Vpreb3|22364|pre-B lymphocyte gene 3	BC062250|Vpreb3|22364|pre-B lymphocyte gene 3
mm9_v1_chr6_+_137703029_137703138	5.38557	RUNX1..3.p2	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr15_-_82863658_82863798	5.38261	RUNX1..3.p2	AK171201|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK155106|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK169918|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170811|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170545|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170593|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170677|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK171086|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170355|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK150635|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK151187|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK151884|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK152262|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK152499|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK152688|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170442|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170883|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK162939|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AF361364|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK170098|Nfam1|74039|Nfat activating molecule with ITAM motif 1	AK171082|Nfam1|74039|Nfat activating molecule with ITAM motif 1
mm9_v1_chr15_-_20596495_20596504	5.34698	RUNX1..3.p2	BC108959|Acot10|64833|acyl-CoA thioesterase 10	BC108960|Acot10|64833|acyl-CoA thioesterase 10	AJ238894|Acot10|64833|acyl-CoA thioesterase 10	NM_022816|Acot10|64833|acyl-CoA thioesterase 10
mm9_v1_chr13_+_4190423_4190467	5.3378	RUNX1..3.p2	AK008949|Akr1c13|27384|aldo-keto reductase family 1, member C13	NM_013778|Akr1c13|27384|aldo-keto reductase family 1, member C13	BC021937|Akr1c13|27384|aldo-keto reductase family 1, member C13	AK220165|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB027125|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB097219|Akr1c13|27384|aldo-keto reductase family 1, member C13
mm9_v1_chr11_+_98799013_98799173	5.31856	RUNX1..3.p2	S56656|Rara|19401|retinoic acid receptor, alpha	BC040383|Rara|19401|retinoic acid receptor, alpha	NM_001177302|Rara|19401|retinoic acid receptor, alpha	AK154623|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chr15_-_98762108_98762276	5.30833	RUNX1..3.p2	AK203041|Tuba1b|22143|tubulin, alpha 1B	AK199828|Tuba1b|22143|tubulin, alpha 1B	AK194222|Tuba1b|22143|tubulin, alpha 1B	AK194839|Tuba1b|22143|tubulin, alpha 1B	AK194180|Tuba1b|22143|tubulin, alpha 1B	AK200029|Tuba1b|22143|tubulin, alpha 1B	AK197610|Tuba1b|22143|tubulin, alpha 1B	AK200084|Tuba1b|22143|tubulin, alpha 1B
mm9_v1_chr8_-_3694155_3694179	5.30301	RUNX1..3.p2	M99371|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK080159|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	M34163|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	NM_013517|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK156654|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK172591|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide
mm9_v1_chr1_+_53353919_53353984	5.28414	RUNX1..3.p2	NM_145517|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK050385|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK052927|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK077562|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC023695|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC025572|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC012315|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)
mm9_v1_chr15_-_36538514_36538548	5.27973	RUNX1..3.p2	X65553|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003928|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr19_-_4306221_4306389	5.27931	RUNX1..3.p2	AK155691|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr18_+_5046584_5046587	5.27461	RUNX1..3.p2	AF317422|Svil|225115|supervillin	AF317423|Svil|225115|supervillin	NM_153153|Svil|225115|supervillin	HQ259291|Svil|225115|supervillin
mm9_v1_chr11_-_84632935_84633016	5.25877	RUNX1..3.p2	AK156416|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK041034|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK164059|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK163986|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	BC005625|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	NM_145433|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chrX_-_71470766_71470914	5.25205	RUNX1..3.p2	BC099506|Flna|192176|filamin, alpha
mm9_v1_chr9_-_103382586_103382657	5.2224	RUNX1..3.p2	AK134810|Bfsp2|107993|beaded filament structural protein 2, phakinin	BC068172|Bfsp2|107993|beaded filament structural protein 2, phakinin	NM_001002896|Bfsp2|107993|beaded filament structural protein 2, phakinin
mm9_v1_chr1_+_133558517_133558572	5.17127	RUNX1..3.p2	X97399|Ctse|13034|cathepsin E	AK165271|Ctse|13034|cathepsin E	CT010252|Ctse|13034|cathepsin E
mm9_v1_chr10_-_80131318_80131466	5.16862	RUNX1..3.p2	AK164278|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK207448|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK008277|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr17_-_71202829_71202871	5.16418	RUNX1..3.p2	AK160193|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164074|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr5_-_92483744_92484066	5.14563	RUNX1..3.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr5_-_20561610_20561764	5.12443	RUNX1..3.p2	X63440|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	BC051980|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	NM_011203|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	AK154107|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12
mm9_v1_chr4_-_19849637_19849704	5.11734	RUNX1..3.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr16_+_3744231_3744292	5.1084	RUNX1..3.p2	BC011505|Zfp263|74120|zinc finger protein 263	BC056222|Zfp263|74120|zinc finger protein 263
mm9_v1_chr11_+_84632348_84632371	5.09246	RUNX1..3.p2	
mm9_v1_chr11_-_100131176_100131184	5.08885	RUNX1..3.p2	BC112371|Krt42|68239|keratin 42	AY459292|Krt42|68239|keratin 42	BC148204|Krt42|68239|keratin 42	NM_212483|Krt42|68239|keratin 42
mm9_v1_chr17_-_84246073_84246129	5.07322	RUNX1..3.p2	AK002608|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC012872|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC094021|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	NM_025325|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase
mm9_v1_chr19_-_41289262_41289457	5.06163	RUNX1..3.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chrX_-_46641408_46641425	5.05286	RUNX1..3.p2	AK028343|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK034058|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK041822|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	NM_145951|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr6_+_70321430_70321482	5.03677	RUNX1..3.p2	
mm9_v1_chr19_-_4801605_4801652	5.03253	RUNX1..3.p2	
mm9_v1_chr17_+_34462609_34462619	5.01098	RUNX1..3.p2	AK157199|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	AK137912|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	BC150834|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	NM_001033978|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2
mm9_v1_chr1_-_97564064_97564129	5.00004	RUNX1..3.p2	AK041723|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK003690|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr11_+_98219742_98219789	4.99309	RUNX1..3.p2	AK155124|Stard3|59045|START domain containing 3	BC058727|Stard3|59045|START domain containing 3	AK160480|Stard3|59045|START domain containing 3	BC003313|Stard3|59045|START domain containing 3
mm9_v1_chr5_-_108998727_108998913	4.99077	RUNX1..3.p2	AK204470|Gak|231580|cyclin G associated kinase	AK205859|Gak|231580|cyclin G associated kinase
mm9_v1_chr7_-_148040227_148040484	4.98559	RUNX1..3.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr7_+_86059126_86059232	4.977	RUNX1..3.p2	CT010213|Isg20|57444|interferon-stimulated protein
mm9_v1_chr7_-_3849680_3849726	4.97203	RUNX1..3.p2	U96686|Pira5|18728|paired-Ig-like receptor A5	AF055896|Pira11|18724|paired-Ig-like receptor A11	AF041036|Pira11|18724|paired-Ig-like receptor A11	BC150155|Pira11|18724|paired-Ig-like receptor A11	NM_001166672|Gm14548|100038909|predicted gene 14548	NM_011091|Pira4|18727|paired-Ig-like receptor A4	U96685|Pira4|18727|paired-Ig-like receptor A4	BC103528|Pira11|18724|paired-Ig-like receptor A11	BC103529|Pira11|18724|paired-Ig-like receptor A11	BC139803|Pira11|18724|paired-Ig-like receptor A11	NM_011088|Pira11|18724|paired-Ig-like receptor A11	AK165650|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011094|Pira7|18730|paired-Ig-like receptor A7	U96688|Pira7|18730|paired-Ig-like receptor A7	BC150712|Pira11|18724|paired-Ig-like receptor A11
mm9_v1_chr19_+_7049639_7049662	4.97058	RUNX1..3.p2	BC125654|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC125650|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr13_-_56279929_56280053	4.96522	RUNX1..3.p2	BC005528|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK153654|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	BC031130|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK170349|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr17_+_35153523_35153582	4.93286	RUNX1..3.p2	AF134319|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	NM_138582|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	BC137792|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3	BC144911|D17H6S56E-3|27762|DNA segment, Chr 17, human D6S56E 3
mm9_v1_chr1_+_172207448_172207506	4.92904	RUNX1..3.p2	BC145540|Sh2d1b1|26904|SH2 domain protein 1B1	BC171965|Sh2d1b1|26904|SH2 domain protein 1B1	AK089191|Sh2d1b1|26904|SH2 domain protein 1B1	BC116698|Sh2d1b1|26904|SH2 domain protein 1B1	BC117508|Sh2d1b1|26904|SH2 domain protein 1B1	NM_012009|Sh2d1b1|26904|SH2 domain protein 1B1	AB196832|Sh2d1b1|26904|SH2 domain protein 1B1	AB196833|Sh2d1b1|26904|SH2 domain protein 1B1	AB196834|Sh2d1b1|26904|SH2 domain protein 1B1	AB196835|Sh2d1b1|26904|SH2 domain protein 1B1	AF020263|Sh2d1b1|26904|SH2 domain protein 1B1	DQ131180|Sh2d1b1|26904|SH2 domain protein 1B1	DQ132507|Sh2d1b1|26904|SH2 domain protein 1B1	DQ132508|Sh2d1b1|26904|SH2 domain protein 1B1	DQ132509|Sh2d1b1|26904|SH2 domain protein 1B1	DQ132510|Sh2d1b1|26904|SH2 domain protein 1B1
mm9_v1_chr1_-_80661844_80661858	4.92865	RUNX1..3.p2	BC150753|Dock10|210293|dedicator of cytokinesis 10
mm9_v1_chr11_+_20125239_20125296	4.91809	RUNX1..3.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr10_-_126807486_126807599	4.90767	RUNX1..3.p2	BC026140|Inhbc|16325|inhibin beta-C	X90819|Inhbc|16325|inhibin beta-C	NM_010565|Inhbc|16325|inhibin beta-C	U95962|Inhbc|16325|inhibin beta-C
mm9_v1_chr2_-_163450863_163450871	4.90739	RUNX1..3.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr10_-_79563929_79563935	4.90679	RUNX1..3.p2	AK149806|Sbno2|216161|strawberry notch homolog 2 (Drosophila)
mm9_v1_chr1_-_20793592_20793721	4.90674	RUNX1..3.p2	AK219838|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr1_-_166865638_166865652	4.89837	RUNX1..3.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr3_+_79690856_79690884	4.89326	RUNX1..3.p2	AK052367|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr5_-_34517234_34517339	4.88913	RUNX1..3.p2	AK013062|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr2_+_155436947_155436947	4.8872	RUNX1..3.p2	NM_001085378|Myh7b|668940|myosin, heavy chain 7B, cardiac muscle, beta
mm9_v1_chr11_-_70068839_70068854	4.87363	RUNX1..3.p2	AK036898|Alox12|11684|arachidonate 12-lipoxygenase	AK172216|Alox12|11684|arachidonate 12-lipoxygenase	AK079232|Alox12|11684|arachidonate 12-lipoxygenase	AK087724|Alox12|11684|arachidonate 12-lipoxygenase	AK172488|Alox12|11684|arachidonate 12-lipoxygenase	BC152329|Alox12|11684|arachidonate 12-lipoxygenase	BC152403|Alox12|11684|arachidonate 12-lipoxygenase	NM_007440|Alox12|11684|arachidonate 12-lipoxygenase	S80446|Alox12|11684|arachidonate 12-lipoxygenase
mm9_v1_chr7_-_87550315_87550316	4.86661	RUNX1..3.p2	AK020294|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_001081454|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr1_+_133558507_133558510	4.86269	RUNX1..3.p2	AK143581|Ctse|13034|cathepsin E
mm9_v1_chr3_-_96618414_96618443	4.84412	RUNX1..3.p2	AF060982|Cd160|54215|CD160 antigen	BC021596|Cd160|54215|CD160 antigen	AK042093|Cd160|54215|CD160 antigen	NM_018767|Cd160|54215|CD160 antigen
mm9_v1_chr18_+_32056465_32056564	4.83855	RUNX1..3.p2	BC003939|Wdr33|74320|WD repeat domain 33
mm9_v1_chr11_-_106128935_106128945	4.83188	RUNX1..3.p2	BC005732|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_031878|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr4_-_40800995_40801058	4.8313	RUNX1..3.p2	BC026824|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	J03880|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	AK154393|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	BC053006|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	NM_022305|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr7_+_109386818_109386954	4.82891	RUNX1..3.p2	AK019004|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr12_-_86097486_86097537	4.82219	RUNX1..3.p2	
mm9_v1_chr11_-_115885714_115885820	4.79276	RUNX1..3.p2	BC092300|H3f3b|15081|H3 histone, family 3B	X13605|H3f3b|15081|H3 histone, family 3B	BC021768|H3f3b|15081|H3 histone, family 3B	BC092043|H3f3b|15081|H3 histone, family 3B	BC002052|H3f3b|15081|H3 histone, family 3B	AK169620|H3f3b|15081|H3 histone, family 3B	BC037730|H3f3b|15081|H3 histone, family 3B	AK167828|H3f3b|15081|H3 histone, family 3B	AK153239|H3f3b|15081|H3 histone, family 3B	AK159615|H3f3b|15081|H3 histone, family 3B	AK166605|H3f3b|15081|H3 histone, family 3B	AK168931|H3f3b|15081|H3 histone, family 3B	AK169042|H3f3b|15081|H3 histone, family 3B	AK044933|H3f3b|15081|H3 histone, family 3B	AK151451|H3f3b|15081|H3 histone, family 3B	AK153189|H3f3b|15081|H3 histone, family 3B	AK151274|H3f3b|15081|H3 histone, family 3B	AK151336|H3f3b|15081|H3 histone, family 3B	AK152026|H3f3b|15081|H3 histone, family 3B	AK153294|H3f3b|15081|H3 histone, family 3B	AK153371|H3f3b|15081|H3 histone, family 3B	AK159338|H3f3b|15081|H3 histone, family 3B	AK169226|H3f3b|15081|H3 histone, family 3B	AK146070|H3f3b|15081|H3 histone, family 3B	AK151658|H3f3b|15081|H3 histone, family 3B	AK151661|H3f3b|15081|H3 histone, family 3B	AK151869|H3f3b|15081|H3 histone, family 3B	AK152453|H3f3b|15081|H3 histone, family 3B	AK152455|H3f3b|15081|H3 histone, family 3B	AK152911|H3f3b|15081|H3 histone, family 3B	AK161675|H3f3b|15081|H3 histone, family 3B	AK162426|H3f3b|15081|H3 histone, family 3B	AK168698|H3f3b|15081|H3 histone, family 3B	AK169039|H3f3b|15081|H3 histone, family 3B	AK163244|H3f3b|15081|H3 histone, family 3B	AK002928|H3f3b|15081|H3 histone, family 3B	AK011431|H3f3b|15081|H3 histone, family 3B	AK159807|H3f3b|15081|H3 histone, family 3B	AK159850|H3f3b|15081|H3 histone, family 3B	AK135839|H3f3b|15081|H3 histone, family 3B	AK151222|H3f3b|15081|H3 histone, family 3B	AK152623|H3f3b|15081|H3 histone, family 3B	AK153530|H3f3b|15081|H3 histone, family 3B	NM_008211|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr10_+_87323855_87324094	4.77844	RUNX1..3.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr7_+_107641853_107641862	4.7767	RUNX1..3.p2	NM_011671|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)
mm9_v1_chr3_-_88262982_88263022	4.75548	RUNX1..3.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr16_+_89206105_89206105	4.74415	RUNX1..3.p2	AK004483|Krtap20-2|622935|keratin associated protein 20-2	NM_001163615|Krtap20-2|622935|keratin associated protein 20-2
mm9_v1_chr6_+_126803115_126803190	4.74201	RUNX1..3.p2	NM_009650|Akap3|11642|A kinase (PRKA) anchor protein 3	BC100458|Akap3|11642|A kinase (PRKA) anchor protein 3	AF093406|Akap3|11642|A kinase (PRKA) anchor protein 3
mm9_v1_chr11_-_86331141_86331142	4.74001	RUNX1..3.p2	AK012045|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr11_+_81915343_81915390	4.72633	RUNX1..3.p2	AK012356|Ccl12|20293|chemokine (C-C motif) ligand 12	NM_011331|Ccl12|20293|chemokine (C-C motif) ligand 12	U50712|Ccl12|20293|chemokine (C-C motif) ligand 12	U66670|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065934|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065935|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065936|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065937|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065938|Ccl12|20293|chemokine (C-C motif) ligand 12	BC027520|Ccl12|20293|chemokine (C-C motif) ligand 12
mm9_v1_chr17_-_84246141_84246165	4.72401	RUNX1..3.p2	AK002295|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase
mm9_v1_chr9_-_57682040_57682040	4.72156	RUNX1..3.p2	AF116847|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC145330|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC150755|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	NM_019689|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)
mm9_v1_chr9_+_7272513_7272544	4.68633	RUNX1..3.p2	BC125320|Mmp13|17386|matrix metallopeptidase 13	BC125322|Mmp13|17386|matrix metallopeptidase 13	NM_008607|Mmp13|17386|matrix metallopeptidase 13	AK150728|Mmp13|17386|matrix metallopeptidase 13	AK151626|Mmp13|17386|matrix metallopeptidase 13	AK152916|Mmp13|17386|matrix metallopeptidase 13	AK153458|Mmp13|17386|matrix metallopeptidase 13	AK155188|Mmp13|17386|matrix metallopeptidase 13	AK152507|Mmp13|17386|matrix metallopeptidase 13	AK159921|Mmp13|17386|matrix metallopeptidase 13	AK160819|Mmp13|17386|matrix metallopeptidase 13	X66473|Mmp13|17386|matrix metallopeptidase 13
mm9_v1_chr17_+_34400152_34400289	4.68285	RUNX1..3.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr5_-_105411580_105411736	4.68235	RUNX1..3.p2	BC029095|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK037614|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AF324242|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK051880|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK156626|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138773|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138772|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	NM_030239|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK030831|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3
mm9_v1_chr11_-_40562329_40562432	4.68161	RUNX1..3.p2	
mm9_v1_chr14_+_31371919_31371994	4.67816	RUNX1..3.p2	AF195533|Tkt|21881|transketolase	AK177246|Tkt|21881|transketolase	AK193096|Tkt|21881|transketolase	AK209594|Tkt|21881|transketolase
mm9_v1_chr12_-_25780932_25780960	4.64399	RUNX1..3.p2	BC006921|Id2|15902|inhibitor of DNA binding 2	BC053699|Id2|15902|inhibitor of DNA binding 2	M69293|Id2|15902|inhibitor of DNA binding 2	AK013239|Id2|15902|inhibitor of DNA binding 2	AK013378|Id2|15902|inhibitor of DNA binding 2	AK003222|Id2|15902|inhibitor of DNA binding 2	AK146346|Id2|15902|inhibitor of DNA binding 2	AK135547|Id2|15902|inhibitor of DNA binding 2	NM_010496|Id2|15902|inhibitor of DNA binding 2	AK146606|Id2|15902|inhibitor of DNA binding 2
mm9_v1_chr11_+_20548192_20548490	4.63427	RUNX1..3.p2	AF366403|Sertad2|58172|SERTA domain containing 2	AK129059|Sertad2|58172|SERTA domain containing 2	BC008257|Sertad2|58172|SERTA domain containing 2	AK195500|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr19_+_6298813_6298952	4.62763	RUNX1..3.p2	AK192505|Ehd1|13660|EH-domain containing 1	AK196160|Ehd1|13660|EH-domain containing 1	AK218303|Ehd1|13660|EH-domain containing 1	AK186304|Ehd1|13660|EH-domain containing 1	AK209033|Ehd1|13660|EH-domain containing 1
mm9_v1_chr3_-_88262805_88262805	4.60783	RUNX1..3.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr14_-_56681093_56681151	4.58316	RUNX1..3.p2	AB051900|Mcpt4|17227|mast cell protease 4	X68804|Mcpt4|17227|mast cell protease 4	BC026198|Mcpt4|17227|mast cell protease 4	AK144385|Mcpt4|17227|mast cell protease 4	AY007569|Mcpt4|17227|mast cell protease 4	M55617|Mcpt4|17227|mast cell protease 4	NM_010779|Mcpt4|17227|mast cell protease 4
mm9_v1_chr10_+_68186493_68186584	4.57866	RUNX1..3.p2	AK028283|Tmem26|327766|transmembrane protein 26	NM_177794|Tmem26|327766|transmembrane protein 26	AK084351|Tmem26|327766|transmembrane protein 26	AK143866|Tmem26|327766|transmembrane protein 26	BC117502|Tmem26|327766|transmembrane protein 26	BC117503|Tmem26|327766|transmembrane protein 26
mm9_v1_chr11_-_120823366_120823479	4.57656	RUNX1..3.p2	AK178709|Csnk1d|104318|casein kinase 1, delta	AK199847|Csnk1d|104318|casein kinase 1, delta	AK210543|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chr12_+_113917038_113917088	4.57197	RUNX1..3.p2	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr7_-_149415875_149415881	4.57177	RUNX1..3.p2	BC111113|Krtap5-5|114666|keratin associated protein 5-5	NM_001037822|Krtap5-5|114666|keratin associated protein 5-5	AK020690|Krtap5-5|114666|keratin associated protein 5-5
mm9_v1_chr8_+_123059756_123059756	4.5656	RUNX1..3.p2	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr2_+_152695336_152695453	4.56503	RUNX1..3.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr9_-_20699140_20699152	4.55414	RUNX1..3.p2	AK214405|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr18_-_35091426_35091569	4.51704	RUNX1..3.p2	AK151028|Etf1|225363|eukaryotic translation termination factor 1	AK151710|Etf1|225363|eukaryotic translation termination factor 1	AK152428|Etf1|225363|eukaryotic translation termination factor 1	AK152952|Etf1|225363|eukaryotic translation termination factor 1	AK038771|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr1_+_129702056_129702170	4.51464	RUNX1..3.p2	AK033697|Ccnt2|72949|cyclin T2
mm9_v1_chr10_-_128258639_128258702	4.50661	RUNX1..3.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr8_+_110068959_110068969	4.48805	RUNX1..3.p2	AK159248|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2
mm9_v1_chr9_-_89594389_89594428	4.48153	RUNX1..3.p2	AK208137|Tmed3|66111|transmembrane emp24 domain containing 3	AK211505|Tmed3|66111|transmembrane emp24 domain containing 3	AK212102|Tmed3|66111|transmembrane emp24 domain containing 3	AK217166|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr1_-_154472199_154472354	4.4776	RUNX1..3.p2	BC017678|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	NM_016846|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	U14103|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169109|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169180|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK144218|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1
mm9_v1_chr4_-_48217142_48217157	4.4771	RUNX1..3.p2	AK214712|Erp44|76299|endoplasmic reticulum protein 44	AK206483|Erp44|76299|endoplasmic reticulum protein 44
mm9_v1_chr9_-_88614635_88614635	4.45625	RUNX1..3.p2	NM_001128601|Gm2382|100039707|predicted gene 2382
mm9_v1_chr4_-_128483355_128483429	4.44814	RUNX1..3.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr7_-_53927906_53927906	4.43476	RUNX1..3.p2	BC072582|Tph1|21990|tryptophan hydroxylase 1	NM_009414|Tph1|21990|tryptophan hydroxylase 1
mm9_v1_chr7_+_86059105_86059120	4.42032	RUNX1..3.p2	AK008139|Isg20|57444|interferon-stimulated protein	AK008171|Isg20|57444|interferon-stimulated protein	AK008353|Isg20|57444|interferon-stimulated protein	NM_001113527|Isg20|57444|interferon-stimulated protein
mm9_v1_chr9_+_45820886_45820906	4.41371	RUNX1..3.p2	NM_027498|Sik3|70661|SIK family kinase 3
mm9_v1_chr14_+_52730577_52730615	4.4066	RUNX1..3.p2	BC081545|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_001168515|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_023879|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK020800|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK044753|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY008297|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY914560|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC086692|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC016092|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1
mm9_v1_chr16_-_90727466_90727648	4.40558	RUNX1..3.p2	AK011719|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK014084|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK012533|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	NM_025642|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	BC079900|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK163310|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene
mm9_v1_chr11_+_49060978_49060984	4.40206	RUNX1..3.p2	AK040121|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_001110149|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr11_+_72812583_72812651	4.3972	RUNX1..3.p2	AF310647|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	BC015084|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	AK035304|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	NM_008771|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	X84896|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1
mm9_v1_chrX_+_109424956_109425024	4.39424	RUNX1..3.p2	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr10_-_92773778_92773948	4.39024	RUNX1..3.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr6_+_108015037_108015048	4.37368	RUNX1..3.p2	AK017895|Setmar|74729|SET domain and mariner transposase fusion gene	NM_178391|Setmar|74729|SET domain and mariner transposase fusion gene	BC045208|Setmar|74729|SET domain and mariner transposase fusion gene
mm9_v1_chr7_-_20262178_20262212	4.36782	RUNX1..3.p2	NM_009695|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr11_-_120900678_120900745	4.35849	RUNX1..3.p2	CT010368|Cd7|12516|CD7 antigen	BC024376|Cd7|12516|CD7 antigen	D10329|Cd7|12516|CD7 antigen	NM_009854|Cd7|12516|CD7 antigen	AK136444|Cd7|12516|CD7 antigen	AK154339|Cd7|12516|CD7 antigen
mm9_v1_chr6_+_87728129_87728134	4.35568	RUNX1..3.p2	AB007464|Gp9|54368|glycoprotein 9 (platelet)	NM_018762|Gp9|54368|glycoprotein 9 (platelet)	BC111106|Gp9|54368|glycoprotein 9 (platelet)
mm9_v1_chr6_-_52154455_52154585	4.34528	RUNX1..3.p2	M36604|Hoxa5|15402|homeobox A5	X16840|Hoxa5|15402|homeobox A5	M28021|Hoxa5|15402|homeobox A5	NM_010453|Hoxa5|15402|homeobox A5
mm9_v1_chr2_+_170111212_170111359	4.3451	RUNX1..3.p2	
mm9_v1_chr7_+_63185457_63185630	4.33633	RUNX1..3.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr5_-_104450785_104450834	4.31958	RUNX1..3.p2	AF304306|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	BC038340|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	NM_053262|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK154803|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155174|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK158327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK170939|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AY053570|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155202|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr2_-_26883441_26883517	4.31707	RUNX1..3.p2	BC058210|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC141168|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC145480|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK172411|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK079650|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	BC025498|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK150104|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK166312|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK163445|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK167904|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK137441|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	AK089246|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001177627|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6	NM_172659|Slc2a6|227659|solute carrier family 2 (facilitated glucose transporter), member 6
mm9_v1_chr19_-_41289045_41289143	4.31083	RUNX1..3.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr11_-_3817574_3817712	4.31073	RUNX1..3.p2	AK202567|Tcn2|21452|transcobalamin 2
mm9_v1_chr5_+_123093892_123094082	4.29661	RUNX1..3.p2	AK144585|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038839|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038845|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038887|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_011027|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK171132|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC062808|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC141120|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145211|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145050|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ009823|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489296|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489297|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128303|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128304|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7
mm9_v1_chr1_-_163748523_163748605	4.28896	RUNX1..3.p2	AK033720|AI848100|226551|expressed sequence AI848100
mm9_v1_chr11_-_102786403_102786422	4.28895	RUNX1..3.p2	AK156592|Kif18b|70218|kinesin family member 18B	BC057614|Kif18b|70218|kinesin family member 18B
mm9_v1_chr19_-_44144244_44144286	4.2835	RUNX1..3.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr16_-_58890041_58890043	4.2828	RUNX1..3.p2	BC127221|Olfr178|258999|olfactory receptor 178	BC111099|Olfr178|258999|olfactory receptor 178	NM_146997|Olfr178|258999|olfactory receptor 178
mm9_v1_chr5_+_104754347_104754401	4.27988	RUNX1..3.p2	AF298661|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	NM_053172|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158231|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158330|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AF314964|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	BC119162|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)
mm9_v1_chr5_+_88916999_88917087	4.24107	RUNX1..3.p2	NM_017468|Enam|13801|enamelin	U82698|Enam|13801|enamelin	BC115848|Enam|13801|enamelin
mm9_v1_chr5_-_31950177_31950254	4.2335	RUNX1..3.p2	AK214115|Rbks|71336|ribokinase
mm9_v1_chr5_+_21151760_21151873	4.22562	RUNX1..3.p2	BC058573|Armc10|67211|armadillo repeat containing 10	AK011303|Armc10|67211|armadillo repeat containing 10	NM_026034|Armc10|67211|armadillo repeat containing 10	AK009821|Armc10|67211|armadillo repeat containing 10	AK012872|Armc10|67211|armadillo repeat containing 10	BC046281|Armc10|67211|armadillo repeat containing 10	BC038487|Armc10|67211|armadillo repeat containing 10	BC027343|Armc10|67211|armadillo repeat containing 10
mm9_v1_chr3_+_68494565_68494565	4.21205	RUNX1..3.p2	NM_001159424|Il12a|16159|interleukin 12a
mm9_v1_chr7_-_52715059_52715287	4.19708	RUNX1..3.p2	BC150761|Ftl2|14337|ferritin light chain 2	BC081462|Ftl1|14325|ferritin light chain 1	BC106145|Ftl1|14325|ferritin light chain 1	J04716|Ftl1|14325|ferritin light chain 1	BC092259|Ftl1|14325|ferritin light chain 1	BC083350|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC019840|Ftl1|14325|ferritin light chain 1	BC085309|Ftl1|14325|ferritin light chain 1	BC106146|Ftl1|14325|ferritin light chain 1	BC020403|Ftl1|14325|ferritin light chain 1	AK152385|Ftl1|14325|ferritin light chain 1	AK150481|Ftl1|14325|ferritin light chain 1	AK152393|Ftl1|14325|ferritin light chain 1	AK167410|Ftl1|14325|ferritin light chain 1	AK168862|Ftl1|14325|ferritin light chain 1	AK002253|Ftl1|14325|ferritin light chain 1	AK002547|Ftl1|14325|ferritin light chain 1	AK011029|Ftl1|14325|ferritin light chain 1	AK150480|Ftl1|14325|ferritin light chain 1	AK152030|Ftl1|14325|ferritin light chain 1	AK152564|Ftl1|14325|ferritin light chain 1	AK152612|Ftl1|14325|ferritin light chain 1	AK168310|Ftl1|14325|ferritin light chain 1	AK168735|Ftl1|14325|ferritin light chain 1	AK168866|Ftl1|14325|ferritin light chain 1	AK169100|Ftl1|14325|ferritin light chain 1	AK002242|Ftl1|14325|ferritin light chain 1	AK011009|Ftl1|14325|ferritin light chain 1	AK011244|Ftl1|14325|ferritin light chain 1	AK075620|Ftl1|14325|ferritin light chain 1	AK145265|Ftl1|14325|ferritin light chain 1	AK145658|Ftl1|14325|ferritin light chain 1	AK150960|Ftl1|14325|ferritin light chain 1	AK151255|Ftl1|14325|ferritin light chain 1	AK159574|Ftl1|14325|ferritin light chain 1	AK169159|Ftl1|14325|ferritin light chain 1	AK088647|Ftl1|14325|ferritin light chain 1	NM_010240|Ftl1|14325|ferritin light chain 1
mm9_v1_chr7_-_25545329_25545329	4.15697	RUNX1..3.p2	BC027283|Cd177|68891|CD177 antigen	NM_026862|Cd177|68891|CD177 antigen
mm9_v1_chr10_-_127984766_127984851	4.13811	RUNX1..3.p2	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr16_-_16073490_16073537	4.11651	RUNX1..3.p2	AK170784|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr1_+_129670740_129670806	4.11621	RUNX1..3.p2	BC054122|Ccnt2|72949|cyclin T2	NM_028399|Ccnt2|72949|cyclin T2	AK156231|Ccnt2|72949|cyclin T2	AK154439|Ccnt2|72949|cyclin T2	AK156621|Ccnt2|72949|cyclin T2	AK152399|Ccnt2|72949|cyclin T2	AK036772|Ccnt2|72949|cyclin T2	AK013634|Ccnt2|72949|cyclin T2	AK049863|Ccnt2|72949|cyclin T2
mm9_v1_chr8_+_73222841_73222868	4.11159	RUNX1..3.p2	BC023211|Jund|16478|Jun proto-oncogene related gene d	BC094068|Jund|16478|Jun proto-oncogene related gene d	BC010572|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr11_-_116711807_116712035	4.10689	RUNX1..3.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr15_-_72929166_72929248	4.10121	RUNX1..3.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr13_+_49678115_49678143	4.10112	RUNX1..3.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr3_+_58219610_58219610	4.09945	RUNX1..3.p2	NM_001081229|Tsc22d2|72033|TSC22 domain family, member 2
mm9_v1_chr19_+_46077927_46078032	4.09048	RUNX1..3.p2	NM_176785|Hps6|20170|Hermansky-Pudlak syndrome 6	AK030582|Hps6|20170|Hermansky-Pudlak syndrome 6	AK159588|Hps6|20170|Hermansky-Pudlak syndrome 6	AK040849|Hps6|20170|Hermansky-Pudlak syndrome 6	BC034055|Hps6|20170|Hermansky-Pudlak syndrome 6	AF536239|Hps6|20170|Hermansky-Pudlak syndrome 6
mm9_v1_chr6_+_122407245_122407359	4.08713	RUNX1..3.p2	AK159742|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr7_-_149562239_149562649	4.08091	RUNX1..3.p2	AK180828|Ctsd|13033|cathepsin D	AK183526|Ctsd|13033|cathepsin D
mm9_v1_chr10_-_6373388_6373465	4.0769	RUNX1..3.p2	AK075931|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK160025|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK036284|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK028211|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK038579|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170785|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170786|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_172308|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr11_-_32100221_32100278	4.05348	RUNX1..3.p2	BC111909|Il9r|16199|interleukin 9 receptor	M84746|Il9r|16199|interleukin 9 receptor	AK088694|Il9r|16199|interleukin 9 receptor	NM_001134458|Il9r|16199|interleukin 9 receptor	NM_008374|Il9r|16199|interleukin 9 receptor
mm9_v1_chr6_-_52154325_52154433	4.04822	RUNX1..3.p2	AK144356|Hoxa5|15402|homeobox A5	AB221550|Hoxa5|15402|homeobox A5	BC011063|Hoxa5|15402|homeobox A5
mm9_v1_chr17_+_48439264_48439362	4.04173	RUNX1..3.p2	DQ341272|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	NM_001033405|Treml2|328833|triggering receptor expressed on myeloid cells-like 2
mm9_v1_chr17_+_25503264_25503277	4.04137	RUNX1..3.p2	M57626|Tpsb2|17229|tryptase beta 2	NM_010781|Tpsb2|17229|tryptase beta 2
mm9_v1_chr12_+_83717883_83718024	4.01569	RUNX1..3.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr7_-_91827857_91827907	4.00909	RUNX1..3.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr2_+_40412520_40412541	4.00579	RUNX1..3.p2	AK196468|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210662|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr16_+_33794452_33794574	4.00309	RUNX1..3.p2	BC024321|Muc13|17063|mucin 13, epithelial transmembrane	AK132274|Muc13|17063|mucin 13, epithelial transmembrane
mm9_v1_chr1_+_166081951_166082088	3.95223	RUNX1..3.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr2_+_163646545_163646658	3.95058	RUNX1..3.p2	NM_016873|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF100778|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF126063|Wisp2|22403|WNT1 inducible signaling pathway protein 2	BC032877|Wisp2|22403|WNT1 inducible signaling pathway protein 2
mm9_v1_chr2_-_169968174_169968177	3.9428	RUNX1..3.p2	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr2_-_130912481_130912549	3.93183	RUNX1..3.p2	NM_011426|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36233|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36234|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36293|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin
mm9_v1_chr11_+_29273673_29273774	3.90117	RUNX1..3.p2	AK051140|Ccdc88a|108686|coiled coil domain containing 88A	NM_176841|Ccdc88a|108686|coiled coil domain containing 88A
mm9_v1_chr14_+_75132097_75132190	3.90057	RUNX1..3.p2	AK010683|Esd|13885|esterase D/formylglutathione hydrolase	AK007527|Esd|13885|esterase D/formylglutathione hydrolase	AB025408|Esd|13885|esterase D/formylglutathione hydrolase	AK180750|Esd|13885|esterase D/formylglutathione hydrolase	AK079131|Esd|13885|esterase D/formylglutathione hydrolase	NM_016903|Esd|13885|esterase D/formylglutathione hydrolase	AK021209|Esd|13885|esterase D/formylglutathione hydrolase	AK163074|Esd|13885|esterase D/formylglutathione hydrolase	BC046766|Esd|13885|esterase D/formylglutathione hydrolase	BC096644|Esd|13885|esterase D/formylglutathione hydrolase	AK088115|Esd|13885|esterase D/formylglutathione hydrolase
mm9_v1_chr16_+_48872756_48872760	3.89186	RUNX1..3.p2	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr7_+_107641863_107641872	3.88787	RUNX1..3.p2	AK054060|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	AK134116|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	AK142687|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	AK165245|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	AK035298|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	AK172307|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)
mm9_v1_chr13_-_67461473_67461507	3.86059	RUNX1..3.p2	BC141233|Zfp953|629016|zinc finger protein 953	AK143165|Zfp953|629016|zinc finger protein 953	NM_001038651|Zfp953|629016|zinc finger protein 953
mm9_v1_chr11_-_99442304_99442329	3.84841	RUNX1..3.p2	BC147095|Krtap1-5|69664|keratin associated protein 1-5	BC147096|Krtap1-5|69664|keratin associated protein 1-5	AK009782|Krtap1-5|69664|keratin associated protein 1-5	NM_027157|Krtap1-5|69664|keratin associated protein 1-5
mm9_v1_chr4_+_61947463_61947577	3.8436	RUNX1..3.p2	NM_025286|Slc31a2|20530|solute carrier family 31, member 2	AK008473|Slc31a2|20530|solute carrier family 31, member 2	BC099447|Slc31a2|20530|solute carrier family 31, member 2	AK007579|Slc31a2|20530|solute carrier family 31, member 2	AK152812|Slc31a2|20530|solute carrier family 31, member 2	AK003269|Slc31a2|20530|solute carrier family 31, member 2	AK151612|Slc31a2|20530|solute carrier family 31, member 2	BC029183|Slc31a2|20530|solute carrier family 31, member 2
mm9_v1_chr11_-_95703462_95703476	3.83399	RUNX1..3.p2	BC058260|Abi3|66610|ABI gene family, member 3	AK172098|Abi3|66610|ABI gene family, member 3	AK018381|Abi3|66610|ABI gene family, member 3	AK008928|Abi3|66610|ABI gene family, member 3	AK033965|Abi3|66610|ABI gene family, member 3	AK162728|Abi3|66610|ABI gene family, member 3
mm9_v1_chr13_-_100972022_100972078	3.8303	RUNX1..3.p2	AF102871|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135489|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135490|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF381770|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147000|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147001|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_001126182|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_010872|Naip2|17948|NLR family, apoptosis inhibitory protein 2
mm9_v1_chr14_-_103381744_103381856	3.82399	RUNX1..3.p2	BC116647|Kctd12|239217|potassium channel tetramerisation domain containing 12	BC116648|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK035535|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK172581|Kctd12|239217|potassium channel tetramerisation domain containing 12	NM_177715|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK087895|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr11_-_87689007_87689037	3.81787	RUNX1..3.p2	BC052881|Epx|13861|eosinophil peroxidase	L77979|Epx|13861|eosinophil peroxidase	D78353|Epx|13861|eosinophil peroxidase	NM_007946|Epx|13861|eosinophil peroxidase
mm9_v1_chr1_+_90203286_90203286	3.81771	RUNX1..3.p2	BC117934|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8	NM_134252|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8
mm9_v1_chr10_+_127528632_127528696	3.80683	RUNX1..3.p2	AK140355|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK155523|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK035400|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	BC020083|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A
mm9_v1_chr3_+_89904315_89904415	3.80431	RUNX1..3.p2	
mm9_v1_chr4_-_6917628_6917956	3.80317	RUNX1..3.p2	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr7_-_134519509_134519563	3.80074	RUNX1..3.p2	BC058799|Zfp747|269997|zinc finger protein 747	AK032584|Zfp747|269997|zinc finger protein 747	AK042972|Zfp747|269997|zinc finger protein 747	NM_175560|Zfp747|269997|zinc finger protein 747
mm9_v1_chr9_+_45820921_45821106	3.79476	RUNX1..3.p2	BC080688|Sik3|70661|SIK family kinase 3	BC063268|Sik3|70661|SIK family kinase 3
mm9_v1_chr19_-_5843823_5843845	3.78145	RUNX1..3.p2	AK018202|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr15_-_82594551_82594616	3.77823	RUNX1..3.p2	BC061152|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	NM_023623|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	AK004984|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	BC087906|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40
mm9_v1_chr11_+_116704828_116704913	3.77606	RUNX1..3.p2	NM_028865|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK135294|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK168267|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	BC026936|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene
mm9_v1_chr14_-_56563474_56563574	3.77579	RUNX1..3.p2	BC139454|Cma1|17228|chymase 1, mast cell	BC139457|Cma1|17228|chymase 1, mast cell	NM_010780|Cma1|17228|chymase 1, mast cell	X68805|Cma1|17228|chymase 1, mast cell	M73760|Cma1|17228|chymase 1, mast cell
mm9_v1_chr14_+_56269018_56269128	3.77187	RUNX1..3.p2	NM_027673|Tssk4|71099|testis-specific serine kinase 4	AK016890|Tssk4|71099|testis-specific serine kinase 4	EF127819|Tssk4|71099|testis-specific serine kinase 4	EF127820|Tssk4|71099|testis-specific serine kinase 4	EF127821|Tssk4|71099|testis-specific serine kinase 4	EF127822|Tssk4|71099|testis-specific serine kinase 4	AK006144|Tssk4|71099|testis-specific serine kinase 4	DQ397205|Tssk4|71099|testis-specific serine kinase 4	DQ397206|Tssk4|71099|testis-specific serine kinase 4	AY461664|Tssk4|71099|testis-specific serine kinase 4	NM_029596|Tssk4|71099|testis-specific serine kinase 4
mm9_v1_chr11_+_101309725_101309821	3.73789	RUNX1..3.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr6_+_66485368_66485514	3.73283	RUNX1..3.p2	AK166065|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK012590|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK010401|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK082934|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	NM_019499|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK160286|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	U83902|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	BC089012|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)
mm9_v1_chr9_+_89106018_89106027	3.72573	RUNX1..3.p2	AK158264|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase	AK004092|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase	NM_026829|Mthfs|107885|5, 10-methenyltetrahydrofolate synthetase
mm9_v1_chr2_+_94246863_94246944	3.72468	RUNX1..3.p2	AK012638|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK016411|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK148028|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK141492|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene
mm9_v1_chr7_-_106987766_106987861	3.72078	RUNX1..3.p2	AK180141|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm9_v1_chr2_+_84820615_84820637	3.70083	RUNX1..3.p2	AK156715|Prg2|19074|proteoglycan 2, bone marrow	AK010901|Prg2|19074|proteoglycan 2, bone marrow	NM_008920|Prg2|19074|proteoglycan 2, bone marrow	BC109348|Prg2|19074|proteoglycan 2, bone marrow
mm9_v1_chr17_+_48439681_48439838	3.69225	RUNX1..3.p2	AK013294|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	AK037593|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	DQ087184|Treml2|328833|triggering receptor expressed on myeloid cells-like 2
mm9_v1_chr11_+_87607285_87607285	3.68594	RUNX1..3.p2	NM_010824|Mpo|17523|myeloperoxidase
mm9_v1_chr11_+_83476085_83476138	3.67615	RUNX1..3.p2	NM_013652|Ccl4|20303|chemokine (C-C motif) ligand 4	AK089326|Ccl4|20303|chemokine (C-C motif) ligand 4	AK154685|Ccl4|20303|chemokine (C-C motif) ligand 4	AK155053|Ccl4|20303|chemokine (C-C motif) ligand 4	M23503|Ccl4|20303|chemokine (C-C motif) ligand 4	AK156948|Ccl4|20303|chemokine (C-C motif) ligand 4	AK172472|Ccl4|20303|chemokine (C-C motif) ligand 4	M35590|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128218|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128219|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119257|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119259|Ccl4|20303|chemokine (C-C motif) ligand 4
mm9_v1_chr1_-_193007202_193007214	3.67473	RUNX1..3.p2	BC019946|Atf3|11910|activating transcription factor 3	NM_007498|Atf3|11910|activating transcription factor 3	AK133965|Atf3|11910|activating transcription factor 3
mm9_v1_chr5_+_91197542_91197576	3.67201	RUNX1..3.p2	AF219112|Ppbp|57349|pro-platelet basic protein	AF278700|Ppbp|57349|pro-platelet basic protein	AK010273|Ppbp|57349|pro-platelet basic protein	AK157141|Ppbp|57349|pro-platelet basic protein	AK171720|Ppbp|57349|pro-platelet basic protein	NM_023785|Ppbp|57349|pro-platelet basic protein	AK157077|Ppbp|57349|pro-platelet basic protein	AB042817|Ppbp|57349|pro-platelet basic protein	AK158061|Ppbp|57349|pro-platelet basic protein	BC127043|Ppbp|57349|pro-platelet basic protein	BC127044|Ppbp|57349|pro-platelet basic protein
mm9_v1_chr7_+_77509969_77510044	3.67116	RUNX1..3.p2	BC070425|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr4_-_142718290_142718420	3.67006	RUNX1..3.p2	AK136099|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr12_-_86097674_86097704	3.66505	RUNX1..3.p2	AK212383|Npc2|67963|Niemann Pick type C2	AK216457|Npc2|67963|Niemann Pick type C2
mm9_v1_chr1_-_75176703_75176874	3.66261	RUNX1..3.p2	AF045562|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	BC006634|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	NM_023732|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK040323|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK164003|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr2_-_121268336_121268336	3.64199	RUNX1..3.p2	BC045151|Ell3|269344|elongation factor RNA polymerase II-like 3	NM_145973|Ell3|269344|elongation factor RNA polymerase II-like 3
mm9_v1_chr5_-_122268520_122268549	3.64039	RUNX1..3.p2	AK188457|Sh2b3|16923|SH2B adaptor protein 3
mm9_v1_chr11_-_4494790_4494809	3.62809	RUNX1..3.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr7_-_31606157_31606210	3.59963	RUNX1..3.p2	NM_001168511|Ffar2|233079|free fatty acid receptor 2	NM_001168510|Ffar2|233079|free fatty acid receptor 2
mm9_v1_chr6_-_69557773_69557830	3.59629	RUNX1..3.p2	
mm9_v1_chr3_+_105261699_105261733	3.57679	RUNX1..3.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chrX_+_12870471_12870561	3.57275	RUNX1..3.p2	AK002917|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr1_+_134402806_134402867	3.55789	RUNX1..3.p2	AK015245|Tmem81|74626|transmembrane protein 81	NM_029025|Tmem81|74626|transmembrane protein 81	AK045585|Tmem81|74626|transmembrane protein 81
mm9_v1_chr2_+_164286735_164286813	3.55557	RUNX1..3.p2	BC061084|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032098|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC053943|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK017524|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr13_-_41582649_41582707	3.52687	RUNX1..3.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr10_+_126432666_126432668	3.52618	RUNX1..3.p2	BC025650|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_146012|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr11_-_70432695_70432695	3.5028	RUNX1..3.p2	NM_009603|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide	X55718|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide
mm9_v1_chr17_-_57333491_57333608	3.49952	RUNX1..3.p2	AF123385|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AF227533|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125477|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125479|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AB029155|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	NM_019418|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14
mm9_v1_chr7_-_25917458_25917515	3.48828	RUNX1..3.p2	AY746974|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC104488|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105647|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105920|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105921|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163554|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163555|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163556|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_011138|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57936|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57937|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57938|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57939|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57940|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57941|Pou2f2|18987|POU domain, class 2, transcription factor 2	AK156322|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC050258|Pou2f2|18987|POU domain, class 2, transcription factor 2	AY746973|Pou2f2|18987|POU domain, class 2, transcription factor 2
mm9_v1_chr10_+_79326950_79327079	3.48497	RUNX1..3.p2	AK189870|Ptbp1|19205|polypyrimidine tract binding protein 1	AK190380|Ptbp1|19205|polypyrimidine tract binding protein 1	AK191581|Ptbp1|19205|polypyrimidine tract binding protein 1	AK192876|Ptbp1|19205|polypyrimidine tract binding protein 1	AK195492|Ptbp1|19205|polypyrimidine tract binding protein 1	AK198834|Ptbp1|19205|polypyrimidine tract binding protein 1	AK200806|Ptbp1|19205|polypyrimidine tract binding protein 1	AK204269|Ptbp1|19205|polypyrimidine tract binding protein 1	AK211894|Ptbp1|19205|polypyrimidine tract binding protein 1	AK217325|Ptbp1|19205|polypyrimidine tract binding protein 1	AK219665|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr5_+_145016734_145016797	3.48382	RUNX1..3.p2	X61454|Bri3|55950|brain protein I3
mm9_v1_chr6_-_124688630_124688780	3.48003	RUNX1..3.p2	AK150509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK132509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	NM_001077705|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6
mm9_v1_chr12_+_75002361_75002386	3.46707	RUNX1..3.p2	X95580|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr6_+_127396847_127396857	3.46242	RUNX1..3.p2	AK151393|Parp11|101187|poly (ADP-ribose) polymerase family, member 11
mm9_v1_chr5_-_123214252_123214302	3.44701	RUNX1..3.p2	AF453383|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	BC023103|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_145358|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr18_-_35091570_35091661	3.42786	RUNX1..3.p2	BC013717|Etf1|225363|eukaryotic translation termination factor 1	AK170221|Etf1|225363|eukaryotic translation termination factor 1	AK077559|Etf1|225363|eukaryotic translation termination factor 1	AK049607|Etf1|225363|eukaryotic translation termination factor 1	AK164020|Etf1|225363|eukaryotic translation termination factor 1	AK139933|Etf1|225363|eukaryotic translation termination factor 1	AK166740|Etf1|225363|eukaryotic translation termination factor 1	AK169345|Etf1|225363|eukaryotic translation termination factor 1	NM_144866|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr4_+_132753616_132753740	3.42113	RUNX1..3.p2	
mm9_v1_chr2_+_164286416_164286607	3.4148	RUNX1..3.p2	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr3_+_89254695_89254739	3.39167	RUNX1..3.p2	AK009590|2310033F14Rik|69555|RIKEN cDNA 2310033F14 gene
mm9_v1_chrX_-_160696001_160696124	3.3744	RUNX1..3.p2	BC138104|Bmx|12169|BMX non-receptor tyrosine kinase	BC138105|Bmx|12169|BMX non-receptor tyrosine kinase	U88091|Bmx|12169|BMX non-receptor tyrosine kinase	AK080038|Bmx|12169|BMX non-receptor tyrosine kinase	AK040936|Bmx|12169|BMX non-receptor tyrosine kinase	NM_009759|Bmx|12169|BMX non-receptor tyrosine kinase
mm9_v1_chr12_+_113858217_113858317	3.37299	RUNX1..3.p2	AK146907|Adssl1|11565|adenylosuccinate synthetase like 1	NM_007421|Adssl1|11565|adenylosuccinate synthetase like 1	AK089520|Adssl1|11565|adenylosuccinate synthetase like 1	AK149634|Adssl1|11565|adenylosuccinate synthetase like 1	AK150874|Adssl1|11565|adenylosuccinate synthetase like 1	M74495|Adssl1|11565|adenylosuccinate synthetase like 1	BC039943|Adssl1|11565|adenylosuccinate synthetase like 1
mm9_v1_chrX_-_71269083_71269215	3.3717	RUNX1..3.p2	U56773|Irak1|16179|interleukin-1 receptor-associated kinase 1	AB088370|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK045958|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK052933|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK144879|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK143694|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr1_-_122401512_122401660	3.36116	RUNX1..3.p2	U18424|Marco|17167|macrophage receptor with collagenous structure	BC132338|Marco|17167|macrophage receptor with collagenous structure	BC137939|Marco|17167|macrophage receptor with collagenous structure	NM_010766|Marco|17167|macrophage receptor with collagenous structure
mm9_v1_chr2_-_166539223_166539286	3.34315	RUNX1..3.p2	BC151074|Prex1|277360|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	BC157940|Prex1|277360|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
mm9_v1_chr6_+_47827535_47827591	3.32053	RUNX1..3.p2	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr1_-_156946739_156946767	3.26778	RUNX1..3.p2	BC051986|Ier5|15939|immediate early response 5	BC021013|Ier5|15939|immediate early response 5	BC037147|Ier5|15939|immediate early response 5	AK146609|Ier5|15939|immediate early response 5	AK150461|Ier5|15939|immediate early response 5	AF079527|Ier5|15939|immediate early response 5	NM_010500|Ier5|15939|immediate early response 5
mm9_v1_chr11_+_100720664_100720716	3.26015	RUNX1..3.p2	NM_011488|Stat5a|20850|signal transducer and activator of transcription 5A	BC013274|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr13_+_20885976_20886097	3.25841	RUNX1..3.p2	AK084452|Aoah|27052|acyloxyacyl hydrolase	NM_012054|Aoah|27052|acyloxyacyl hydrolase	AK033474|Aoah|27052|acyloxyacyl hydrolase	AK170293|Aoah|27052|acyloxyacyl hydrolase	BC089580|Aoah|27052|acyloxyacyl hydrolase	AK150886|Aoah|27052|acyloxyacyl hydrolase	AK152346|Aoah|27052|acyloxyacyl hydrolase	AK085343|Aoah|27052|acyloxyacyl hydrolase	AK133301|Aoah|27052|acyloxyacyl hydrolase	AK152985|Aoah|27052|acyloxyacyl hydrolase
mm9_v1_chr3_+_95462640_95462703	3.2527	RUNX1..3.p2	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr2_-_85488475_85488475	3.23446	RUNX1..3.p2	NM_146573|Olfr1002|258566|olfactory receptor 1002
mm9_v1_chr2_+_172847371_172847458	3.22651	RUNX1..3.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr9_-_44613544_44613680	3.20659	RUNX1..3.p2	
mm9_v1_chr1_-_193006986_193007136	3.20631	RUNX1..3.p2	AY329367|Atf3|11910|activating transcription factor 3	BC064799|Atf3|11910|activating transcription factor 3	U19118|Atf3|11910|activating transcription factor 3	AK156786|Atf3|11910|activating transcription factor 3
mm9_v1_chr18_-_62339609_62339644	3.20461	RUNX1..3.p2	BC032883|Adrb2|11555|adrenergic receptor, beta 2	NM_007420|Adrb2|11555|adrenergic receptor, beta 2	AK080241|Adrb2|11555|adrenergic receptor, beta 2	AK080276|Adrb2|11555|adrenergic receptor, beta 2
mm9_v1_chr19_+_10788964_10788976	3.20173	RUNX1..3.p2	
mm9_v1_chr19_+_46078075_46078090	3.19639	RUNX1..3.p2	AK172058|Hps6|20170|Hermansky-Pudlak syndrome 6
mm9_v1_chrX_-_71527671_71527671	3.18975	RUNX1..3.p2	BC023246|Dnase1l1|69537|deoxyribonuclease 1-like 1	NM_001172154|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr19_+_40734282_40734322	3.18895	RUNX1..3.p2	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr1_-_137180586_137180686	3.17832	RUNX1..3.p2	AK159445|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK031138|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK159195|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK159625|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	BC019200|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	BC010520|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	NM_001159624|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	NM_145417|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK145466|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)
mm9_v1_chr10_-_118293979_118293989	3.17224	RUNX1..3.p2	AK007736|Dyrk2|69181|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm9_v1_chr19_-_10995090_10995121	3.16519	RUNX1..3.p2	BC125613|Zp1|22786|zona pellucida glycoprotein 1	BC125615|Zp1|22786|zona pellucida glycoprotein 1	NM_009580|Zp1|22786|zona pellucida glycoprotein 1	BC100347|Zp1|22786|zona pellucida glycoprotein 1	U20448|Zp1|22786|zona pellucida glycoprotein 1
mm9_v1_chr1_+_136079079_136079104	3.15345	RUNX1..3.p2	CT010283|Chi3l1|12654|chitinase 3-like 1	EU313768|Chi3l1|12654|chitinase 3-like 1
mm9_v1_chr3_+_95463691_95463776	3.14822	RUNX1..3.p2	AK010424|Mcl1|17210|myeloid cell leukemia sequence 1	AK160594|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr5_+_120881778_120882006	3.14149	RUNX1..3.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr10_+_80820218_80820329	3.13849	RUNX1..3.p2	AK154902|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK170185|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK149678|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK154386|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK171084|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC118620|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC119790|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	NM_028657|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene
mm9_v1_chr5_-_87911282_87911282	3.13269	RUNX1..3.p2	BC048920|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	BC058786|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001024148|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2
mm9_v1_chr16_-_95680888_95680987	3.12669	RUNX1..3.p2	AK142379|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chr16_-_76288569_76288581	3.12315	RUNX1..3.p2	BC062260|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chr11_+_115891591_115891668	3.12231	RUNX1..3.p2	AK077635|Unk|217331|unkempt homolog (Drosophila)	AK046395|Unk|217331|unkempt homolog (Drosophila)	NM_172569|Unk|217331|unkempt homolog (Drosophila)	AK078095|Unk|217331|unkempt homolog (Drosophila)	AK129438|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr7_-_29678773_29678890	3.12188	RUNX1..3.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr18_-_42739132_42739305	3.11973	RUNX1..3.p2	AY255533|Gpr151|240239|G protein-coupled receptor 151	AY351677|Gpr151|240239|G protein-coupled receptor 151	BC120520|Gpr151|240239|G protein-coupled receptor 151	BC120526|Gpr151|240239|G protein-coupled receptor 151	AJ564167|Gpr151|240239|G protein-coupled receptor 151	NM_181543|Gpr151|240239|G protein-coupled receptor 151
mm9_v1_chr10_-_127806232_127806252	3.11894	RUNX1..3.p2	AK080862|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147716|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147722|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr7_-_71537085_71537174	3.11154	RUNX1..3.p2	BC049270|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	BC038033|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	AK013337|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	BC018177|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	AK017490|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	NM_026483|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
mm9_v1_chr17_-_41071432_41071526	3.10501	RUNX1..3.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr11_-_99471502_99471502	3.09863	RUNX1..3.p2	NM_001099346|Gm11937|100041488|predicted gene 11937
mm9_v1_chr6_-_40386107_40386145	3.09204	RUNX1..3.p2	AK145280|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	AK147402|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	AK054277|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	NM_175528|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene
mm9_v1_chr10_+_43298969_43299042	3.08674	RUNX1..3.p2	AK014279|Cd24a|12484|CD24a antigen	NM_009846|Cd24a|12484|CD24a antigen	AK133869|Cd24a|12484|CD24a antigen	AK168111|Cd24a|12484|CD24a antigen	AK169613|Cd24a|12484|CD24a antigen	BC026702|Cd24a|12484|CD24a antigen	M58661|Cd24a|12484|CD24a antigen	BC075622|Cd24a|12484|CD24a antigen	X53825|Cd24a|12484|CD24a antigen
mm9_v1_chr3_+_89904553_89904598	3.081	RUNX1..3.p2	X73607|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr1_-_84741605_84741713	3.08085	RUNX1..3.p2	BC004085|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr1_+_40141586_40141636	3.06715	RUNX1..3.p2	AK132264|Il1r2|16178|interleukin 1 receptor, type II	NM_010555|Il1r2|16178|interleukin 1 receptor, type II	X59769|Il1r2|16178|interleukin 1 receptor, type II	BC032962|Il1r2|16178|interleukin 1 receptor, type II
mm9_v1_chr11_-_99520272_99520272	3.05907	RUNX1..3.p2	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chrX_-_71269249_71269268	3.04373	RUNX1..3.p2	BC004778|Irak1|16179|interleukin-1 receptor-associated kinase 1	AF103876|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184362|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184363|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184364|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177975|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177973|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177974|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177976|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_008363|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr19_-_41068625_41068698	3.04223	RUNX1..3.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr12_+_113886150_113886156	3.03552	RUNX1..3.p2	AK194303|Siva1|30954|SIVA1, apoptosis-inducing factor	AK207814|Siva1|30954|SIVA1, apoptosis-inducing factor	AK213981|Siva1|30954|SIVA1, apoptosis-inducing factor	AK218153|Siva1|30954|SIVA1, apoptosis-inducing factor
mm9_v1_chr9_-_65732822_65732840	3.01416	RUNX1..3.p2	AF197574|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr19_-_11410534_11410635	3.01389	RUNX1..3.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chrX_-_91077290_91077385	3.0058	RUNX1..3.p2	CT010338|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr5_+_89194037_89194113	3.00373	RUNX1..3.p2	NM_007832|Dck|13178|deoxycytidine kinase	BC060062|Dck|13178|deoxycytidine kinase	AK145353|Dck|13178|deoxycytidine kinase	AK145390|Dck|13178|deoxycytidine kinase	BC052004|Dck|13178|deoxycytidine kinase
mm9_v1_chr2_+_74707394_74707441	2.99842	RUNX1..3.p2	AK207939|Mtx2|53375|metaxin 2	AK212612|Mtx2|53375|metaxin 2	AK216047|Mtx2|53375|metaxin 2
mm9_v1_chr14_+_56636800_56636809	2.99754	RUNX1..3.p2	NM_008570|Mcpt1|17224|mast cell protease 1	S44609|Mcpt1|17224|mast cell protease 1	BC100700|Mcpt1|17224|mast cell protease 1	BC100701|Mcpt1|17224|mast cell protease 1	BC100702|Mcpt1|17224|mast cell protease 1	BC100703|Mcpt1|17224|mast cell protease 1
mm9_v1_chr5_-_123183537_123183571	2.98839	RUNX1..3.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr6_+_113232319_113232420	2.9654	RUNX1..3.p2	AK047431|Cpne9|211232|copine family member IX	BC115728|Cpne9|211232|copine family member IX	AK047571|Cpne9|211232|copine family member IX	AK044080|Cpne9|211232|copine family member IX
mm9_v1_chr10_+_86520790_86520790	2.96168	RUNX1..3.p2	NM_029685|1700113H08Rik|76640|RIKEN cDNA 1700113H08 gene
mm9_v1_chr2_-_150514717_150514872	2.93278	RUNX1..3.p2	AF391758|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AY056825|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044393|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044687|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138456|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138460|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AF395732|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC057647|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	NM_054068|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)
mm9_v1_chr2_+_90517371_90517371	2.92958	RUNX1..3.p2	AF104415|Nup160|59015|nucleoporin 160	NM_021512|Nup160|59015|nucleoporin 160
mm9_v1_chr2_-_118375365_118375421	2.92429	RUNX1..3.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr5_-_104450856_104450959	2.91145	RUNX1..3.p2	AK049355|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr16_-_88708151_88708206	2.90788	RUNX1..3.p2	BC133700|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene	AK010010|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene	NM_027155|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene
mm9_v1_chr8_-_125135240_125135386	2.90558	RUNX1..3.p2	BC004002|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK220245|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK033946|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AF111346|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK159592|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_001193645|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_016722|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase
mm9_v1_chr17_-_35137278_35137288	2.90481	RUNX1..3.p2	BC027314|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr11_+_94426358_94426387	2.89986	RUNX1..3.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr9_-_78326946_78326968	2.8981	RUNX1..3.p2	BC099609|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr2_-_131685482_131685482	2.89673	RUNX1..3.p2	AK005451|Erv3|71995|endogenous retroviral sequence 3	NM_001166206|Erv3|71995|endogenous retroviral sequence 3
mm9_v1_chr14_+_49686169_49686492	2.89097	RUNX1..3.p2	BC023094|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	NM_144535|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK028927|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK041400|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK154166|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK016540|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK051372|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036465|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK030928|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036454|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK042544|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK170232|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK164148|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK211895|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing
mm9_v1_chr1_-_34490108_34490136	2.88649	RUNX1..3.p2	
mm9_v1_chr2_-_60801248_60801283	2.86971	RUNX1..3.p2	BC016501|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK147109|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_020296|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr8_-_109407905_109408045	2.86798	RUNX1..3.p2	AK193837|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr11_-_94254221_94254308	2.86246	RUNX1..3.p2	BC048825|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK155664|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AY841885|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	BC150788|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534127|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534128|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534129|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AY795569|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK149551|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	NM_029600|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK156615|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK172420|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3
mm9_v1_chr5_-_121262512_121262534	2.86082	RUNX1..3.p2	AK028986|Oas1c|114643|2'-5' oligoadenylate synthetase 1C	NM_033541|Oas1c|114643|2'-5' oligoadenylate synthetase 1C
mm9_v1_chr17_-_89599951_89600014	2.84903	RUNX1..3.p2	AF095642|Fshr|14309|follicle stimulating hormone receptor	BC137990|Fshr|14309|follicle stimulating hormone receptor	BC137991|Fshr|14309|follicle stimulating hormone receptor	AK016635|Fshr|14309|follicle stimulating hormone receptor	NM_013523|Fshr|14309|follicle stimulating hormone receptor
mm9_v1_chr2_+_153834000_153834013	2.83812	RUNX1..3.p2	AK009032|Psp|19194|parotid secretory protein	AK010181|Psp|19194|parotid secretory protein	AK009654|Psp|19194|parotid secretory protein	BC010288|Psp|19194|parotid secretory protein	BC053336|Psp|19194|parotid secretory protein	NM_008953|Psp|19194|parotid secretory protein	BC037124|Psp|19194|parotid secretory protein
mm9_v1_chr16_-_16869309_16869347	2.82709	RUNX1..3.p2	BC117051|Vpreb1|22362|pre-B lymphocyte gene 1	BC119175|Vpreb1|22362|pre-B lymphocyte gene 1	BC144850|Vpreb1|22362|pre-B lymphocyte gene 1	AK010843|Vpreb1|22362|pre-B lymphocyte gene 1	AK010879|Vpreb1|22362|pre-B lymphocyte gene 1	X05556|Vpreb1|22362|pre-B lymphocyte gene 1	NM_016982|Vpreb1|22362|pre-B lymphocyte gene 1
mm9_v1_chr5_+_16078748_16078768	2.80466	RUNX1..3.p2	AK164241|Hgf|15234|hepatocyte growth factor
mm9_v1_chr14_-_21208006_21208158	2.80391	RUNX1..3.p2	AK162075|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC023787|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC027012|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK075979|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK153033|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC014686|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK043725|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK077324|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	NM_134081|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9
mm9_v1_chr17_-_27165478_27165573	2.80081	RUNX1..3.p2	AK089220|Bak1|12018|BCL2-antagonist/killer 1	BC057589|Bak1|12018|BCL2-antagonist/killer 1	NM_007523|Bak1|12018|BCL2-antagonist/killer 1	Y13231|Bak1|12018|BCL2-antagonist/killer 1
mm9_v1_chr8_-_72438496_72438584	2.79838	RUNX1..3.p2	BC019178|Gatad2a|234366|GATA zinc finger domain containing 2A	AK189334|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr11_-_99671205_99671209	2.78817	RUNX1..3.p2	AK009035|Krtap4-13|69464|keratin associated protein 4-13	BC104358|Gm11554|670482|predicted gene 11554	BC104359|Gm11554|670482|predicted gene 11554	BC119472|Gm11554|670482|predicted gene 11554	BC119473|Gm11554|670482|predicted gene 11554	NM_001099313|Gm11554|670482|predicted gene 11554	NM_027087|Krtap4-13|69464|keratin associated protein 4-13
mm9_v1_chr18_-_9282615_9282806	2.77891	RUNX1..3.p2	AJ414562|Gjd4|225152|gap junction protein, delta 4	AK053016|Gjd4|225152|gap junction protein, delta 4	BC137984|Gjd4|225152|gap junction protein, delta 4	AK034663|Gjd4|225152|gap junction protein, delta 4	NM_153086|Gjd4|225152|gap junction protein, delta 4
mm9_v1_chr8_+_23348971_23348971	2.77605	RUNX1..3.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr9_-_82826139_82826181	2.77294	RUNX1..3.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr6_+_83004687_83004775	2.76771	RUNX1..3.p2	AK171202|Aup1|11993|ancient ubiquitous protein 1	AK171011|Aup1|11993|ancient ubiquitous protein 1	AK171184|Aup1|11993|ancient ubiquitous protein 1	BC016485|Aup1|11993|ancient ubiquitous protein 1	AK144497|Aup1|11993|ancient ubiquitous protein 1	AK158035|Aup1|11993|ancient ubiquitous protein 1	AK167335|Aup1|11993|ancient ubiquitous protein 1	AK171249|Aup1|11993|ancient ubiquitous protein 1	AK171541|Aup1|11993|ancient ubiquitous protein 1	U41736|Aup1|11993|ancient ubiquitous protein 1	AK171621|Aup1|11993|ancient ubiquitous protein 1	BC012699|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr2_+_13495963_13495974	2.76202	RUNX1..3.p2	X51438|Vim|22352|vimentin	X56397|Vim|22352|vimentin
mm9_v1_chr4_+_15193231_15193387	2.7487	RUNX1..3.p2	AK170682|Tmem64|100201|transmembrane protein 64	AK035894|Tmem64|100201|transmembrane protein 64	AK169861|Tmem64|100201|transmembrane protein 64
mm9_v1_chr17_-_35137291_35137321	2.74859	RUNX1..3.p2	AK161228|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK037701|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK075966|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr12_-_74214214_74214231	2.74641	RUNX1..3.p2	BC137931|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	BC137934|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	D50416|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)	NM_011382|Six4|20474|sine oculis-related homeobox 4 homolog (Drosophila)
mm9_v1_chr4_-_43849385_43849388	2.74574	RUNX1..3.p2	BC137911|Olfr157|100040268|olfactory receptor 157	BC137912|Olfr157|100040268|olfactory receptor 157	NM_019475|Olfr157|100040268|olfactory receptor 157
mm9_v1_chr4_+_114971650_114971729	2.74402	RUNX1..3.p2	NM_177406|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC014721|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC026582|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC025936|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC033924|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	AK144260|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC031141|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a
mm9_v1_chr18_+_13165498_13165545	2.7345	RUNX1..3.p2	AF358859|Hrh4|225192|histamine receptor H4	NM_153087|Hrh4|225192|histamine receptor H4	BC111862|Hrh4|225192|histamine receptor H4	EU660535|Hrh4|225192|histamine receptor H4	EU660534|Hrh4|225192|histamine receptor H4
mm9_v1_chr1_-_122401329_122401342	2.73416	RUNX1..3.p2	AK156388|Marco|17167|macrophage receptor with collagenous structure	AK169230|Marco|17167|macrophage receptor with collagenous structure	AK159967|Marco|17167|macrophage receptor with collagenous structure
mm9_v1_chr14_-_51405130_51405204	2.72956	RUNX1..3.p2	BC003272|Ttc5|219022|tetratricopeptide repeat domain 5	BC025610|Ttc5|219022|tetratricopeptide repeat domain 5	AK077874|Ttc5|219022|tetratricopeptide repeat domain 5	BC092074|Ttc5|219022|tetratricopeptide repeat domain 5	AK081214|Ttc5|219022|tetratricopeptide repeat domain 5	AK161279|Ttc5|219022|tetratricopeptide repeat domain 5	AK157777|Ttc5|219022|tetratricopeptide repeat domain 5	AK133953|Ttc5|219022|tetratricopeptide repeat domain 5	BC069946|Ttc5|219022|tetratricopeptide repeat domain 5	AK044781|Ttc5|219022|tetratricopeptide repeat domain 5	NM_001080949|Ttc5|219022|tetratricopeptide repeat domain 5	NM_177625|Ttc5|219022|tetratricopeptide repeat domain 5
mm9_v1_chr3_-_88188354_88188385	2.72787	RUNX1..3.p2	U11542|Bglap|12096|bone gamma carboxyglutamate protein	NM_001037939|Bglap|12096|bone gamma carboxyglutamate protein	NM_007541|Bglap|12096|bone gamma carboxyglutamate protein
mm9_v1_chr17_-_7165497_7165525	2.7261	RUNX1..3.p2	AF314818|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119550|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119551|Tagap1|380608|T-cell activation GTPase activating protein 1	BC139797|Tagap1|380608|T-cell activation GTPase activating protein 1	NM_147155|Tagap1|380608|T-cell activation GTPase activating protein 1
mm9_v1_chr3_+_94758056_94758147	2.72567	RUNX1..3.p2	BC051965|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC075717|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AK088686|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC057336|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)
mm9_v1_chr3_+_144955435_144955435	2.72542	RUNX1..3.p2	DQ157748|Col24a1|71355|collagen, type XXIV, alpha 1	NM_027770|Col24a1|71355|collagen, type XXIV, alpha 1
mm9_v1_chr15_-_101632762_101632762	2.72434	RUNX1..3.p2	BC067067|Krt73|223915|keratin 73	NM_212485|Krt73|223915|keratin 73
mm9_v1_chr17_-_34164996_34165023	2.72259	RUNX1..3.p2	BC086927|H2-Ke6|14979|H2-K region expressed gene 6	NM_013543|H2-Ke6|14979|H2-K region expressed gene 6
mm9_v1_chr13_+_54676356_54676474	2.72012	RUNX1..3.p2	NM_019968|Arl10|56795|ADP-ribosylation factor-like 10	AK154684|Arl10|56795|ADP-ribosylation factor-like 10	AF205936|Arl10|56795|ADP-ribosylation factor-like 10	BC115498|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr8_+_67492815_67492895	2.68946	RUNX1..3.p2	
mm9_v1_chr2_-_25221101_25221190	2.68815	RUNX1..3.p2	BC043307|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077912|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK151942|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	NM_001033293|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK149178|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK168977|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK159787|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077550|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	BC130030|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
mm9_v1_chr3_+_33919000_33919031	2.68799	RUNX1..3.p2	NM_001113188|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_001113189|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_008053|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	X90875|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	BC019139|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog
mm9_v1_chr13_-_38069696_38069810	2.68365	RUNX1..3.p2	
mm9_v1_chr14_-_27489331_27489368	2.68137	RUNX1..3.p2	BC064450|Pde12|211948|phosphodiesterase 12	NM_178668|Pde12|211948|phosphodiesterase 12	AK161083|Pde12|211948|phosphodiesterase 12
mm9_v1_chr14_+_55551531_55551607	2.67875	RUNX1..3.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr4_+_116381526_116381534	2.6702	RUNX1..3.p2	BC022718|Ccdc163|68394|coiled-coil domain containing 163	BC022733|Ccdc163|68394|coiled-coil domain containing 163	NM_026714|Ccdc163|68394|coiled-coil domain containing 163
mm9_v1_chr11_+_100488379_100488445	2.66921	RUNX1..3.p2	
mm9_v1_chr16_-_15966723_15966739	2.66397	RUNX1..3.p2	BC085258|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr6_-_118361541_118361556	2.65966	RUNX1..3.p2	BC030906|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr7_-_80520624_80520679	2.64937	RUNX1..3.p2	AK053954|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene	AK043101|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene
mm9_v1_chr11_+_115891682_115891695	2.6373	RUNX1..3.p2	BC054452|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr3_+_88968718_88968771	2.635	RUNX1..3.p2	NM_001163432|Clk2|12748|CDC-like kinase 2	NM_007712|Clk2|12748|CDC-like kinase 2	AK148377|Clk2|12748|CDC-like kinase 2	BC015080|Clk2|12748|CDC-like kinase 2
mm9_v1_chr1_+_136078939_136079071	2.63395	RUNX1..3.p2	NM_007695|Chi3l1|12654|chitinase 3-like 1	AK051475|Chi3l1|12654|chitinase 3-like 1	AK155412|Chi3l1|12654|chitinase 3-like 1	BC003780|Chi3l1|12654|chitinase 3-like 1	BC004734|Chi3l1|12654|chitinase 3-like 1	BC005611|Chi3l1|12654|chitinase 3-like 1
mm9_v1_chr11_-_55421246_55421364	2.63208	RUNX1..3.p2	AY129229|Glra1|14654|glycine receptor, alpha 1 subunit	NM_020492|Glra1|14654|glycine receptor, alpha 1 subunit	S73717|Glra1|14654|glycine receptor, alpha 1 subunit	S73718|Glra1|14654|glycine receptor, alpha 1 subunit	BC131949|Glra1|14654|glycine receptor, alpha 1 subunit	BC137725|Glra1|14654|glycine receptor, alpha 1 subunit
mm9_v1_chr14_-_32454146_32454155	2.62924	RUNX1..3.p2	AK041686|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AJ132139|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK050078|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	NM_019975|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr14_+_66915902_66915902	2.62138	RUNX1..3.p2	AK003000|Trim35|66854|tripartite motif-containing 35	AK020775|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr11_-_78200059_78200059	2.61931	RUNX1..3.p2	NM_008238|Foxn1|15218|forkhead box N1	X81593|Foxn1|15218|forkhead box N1
mm9_v1_chr11_-_54080751_54080780	2.61838	RUNX1..3.p2	DQ788721|Il3|16187|interleukin 3	BC125552|Il3|16187|interleukin 3	BC125554|Il3|16187|interleukin 3	K01668|Il3|16187|interleukin 3	K01850|Il3|16187|interleukin 3	AK153634|Il3|16187|interleukin 3	NM_010556|Il3|16187|interleukin 3
mm9_v1_chr19_-_5272972_5273118	2.61031	RUNX1..3.p2	AK164770|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	AK171969|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	AK154563|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	BC062886|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	NM_153129|Pacs1|107975|phosphofurin acidic cluster sorting protein 1
mm9_v1_chr16_+_17233664_17233756	2.60969	RUNX1..3.p2	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr1_+_172163001_172163001	2.60735	RUNX1..3.p2	DQ131181|Sh2d1b2|545378|SH2 domain protein 1B2	DQ140178|Sh2d1b2|545378|SH2 domain protein 1B2	NM_001033499|Sh2d1b2|545378|SH2 domain protein 1B2
mm9_v1_chr2_-_84567424_84567451	2.6071	RUNX1..3.p2	BC003237|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	NM_133840|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK053169|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK169709|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr3_+_88132260_88132323	2.6053	RUNX1..3.p2	AK181690|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK185188|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK191578|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK193175|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK194674|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK197570|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK204093|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK204506|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK212912|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK217267|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene
mm9_v1_chr9_-_45763300_45763376	2.59782	RUNX1..3.p2	AK081177|Sidt2|214597|SID1 transmembrane family, member 2	BC023957|Sidt2|214597|SID1 transmembrane family, member 2	NM_172257|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr4_+_45903174_45903208	2.59568	RUNX1..3.p2	NM_198660|E230008N13Rik|381522|RIKEN cDNA E230008N13 gene
mm9_v1_chr18_+_61265225_61265605	2.58552	RUNX1..3.p2	AK146069|Csf1r|12978|colony stimulating factor 1 receptor	NM_001037859|Csf1r|12978|colony stimulating factor 1 receptor	BC066863|Csf1r|12978|colony stimulating factor 1 receptor	BC050024|Csf1r|12978|colony stimulating factor 1 receptor	AK171241|Csf1r|12978|colony stimulating factor 1 receptor	AK156550|Csf1r|12978|colony stimulating factor 1 receptor	AK155565|Csf1r|12978|colony stimulating factor 1 receptor	AK155488|Csf1r|12978|colony stimulating factor 1 receptor	AK079247|Csf1r|12978|colony stimulating factor 1 receptor	AK155576|Csf1r|12978|colony stimulating factor 1 receptor	AK155858|Csf1r|12978|colony stimulating factor 1 receptor	AK154128|Csf1r|12978|colony stimulating factor 1 receptor	AK155640|Csf1r|12978|colony stimulating factor 1 receptor	AK155654|Csf1r|12978|colony stimulating factor 1 receptor	AK171386|Csf1r|12978|colony stimulating factor 1 receptor	AK004947|Csf1r|12978|colony stimulating factor 1 receptor	AK154556|Csf1r|12978|colony stimulating factor 1 receptor	AK154653|Csf1r|12978|colony stimulating factor 1 receptor	AK154699|Csf1r|12978|colony stimulating factor 1 receptor	AK076215|Csf1r|12978|colony stimulating factor 1 receptor	AK143545|Csf1r|12978|colony stimulating factor 1 receptor	X06368|Csf1r|12978|colony stimulating factor 1 receptor	X68932|Csf1r|12978|colony stimulating factor 1 receptor	AK080326|Csf1r|12978|colony stimulating factor 1 receptor	BC043054|Csf1r|12978|colony stimulating factor 1 receptor	AK089498|Csf1r|12978|colony stimulating factor 1 receptor	AK171543|Csf1r|12978|colony stimulating factor 1 receptor	BC036343|Csf1r|12978|colony stimulating factor 1 receptor	AK041299|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr14_+_56372605_56372670	2.5814	RUNX1..3.p2	AK208092|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr13_+_89680457_89680462	2.5807	RUNX1..3.p2	AK048107|Hapln1|12950|hyaluronan and proteoglycan link protein 1	AK003582|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr7_-_51562263_51562328	2.57627	RUNX1..3.p2	AB009245|Clec11a|20256|C-type lectin domain family 11, member a	BC002001|Clec11a|20256|C-type lectin domain family 11, member a	NM_009131|Clec11a|20256|C-type lectin domain family 11, member a
mm9_v1_chr17_+_28712663_28712865	2.57515	RUNX1..3.p2	AK020389|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	NM_026571|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	AK020670|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	BC099483|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	BC125264|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	BC147842|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5	BC147847|Lhfpl5|328789|lipoma HMGIC fusion partner-like 5
mm9_v1_chr11_-_4494815_4494822	2.57469	RUNX1..3.p2	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr15_+_98620287_98620435	2.56386	RUNX1..3.p2	BC005449|Wnt1|22408|wingless-related MMTV integration site 1	NM_021279|Wnt1|22408|wingless-related MMTV integration site 1	AK141669|Wnt1|22408|wingless-related MMTV integration site 1	M11943|Wnt1|22408|wingless-related MMTV integration site 1
mm9_v1_chr7_-_107663293_107663468	2.55813	RUNX1..3.p2	AK139680|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	BC048501|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	NM_153527|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	AF419292|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13
mm9_v1_chr12_-_114099102_114099167	2.55467	RUNX1..3.p2	AK089866|Gpr132|56696|G protein-coupled receptor 132	AK153765|Gpr132|56696|G protein-coupled receptor 132	NM_019925|Gpr132|56696|G protein-coupled receptor 132	AK154509|Gpr132|56696|G protein-coupled receptor 132	AK157600|Gpr132|56696|G protein-coupled receptor 132	AF083442|Gpr132|56696|G protein-coupled receptor 132
mm9_v1_chr5_-_115594042_115594212	2.55001	RUNX1..3.p2	BC005740|Mlec|109154|malectin	BC025208|Mlec|109154|malectin
mm9_v1_chr15_+_57526212_57526467	2.53755	RUNX1..3.p2	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr7_+_148043261_148043383	2.53435	RUNX1..3.p2	AK167746|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	NM_053194|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AF288813|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	BC022917|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK155282|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK165536|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK169367|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK031466|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK080192|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)	AK171093|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)
mm9_v1_chr19_+_5493612_5493771	2.53227	RUNX1..3.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr2_+_180460024_180460083	2.52848	RUNX1..3.p2	NM_183161|Slc17a9|228993|solute carrier family 17, member 9	BC019537|Slc17a9|228993|solute carrier family 17, member 9
mm9_v1_chr4_+_151424681_151424743	2.52538	RUNX1..3.p2	AK179132|Nol9|74035|nucleolar protein 9
mm9_v1_chr5_+_136559785_136559909	2.5202	RUNX1..3.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr10_-_126725826_126725958	2.51683	RUNX1..3.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr2_-_126501173_126501305	2.51582	RUNX1..3.p2	AY282801|Gabpb1|14391|GA repeat binding protein, beta 1	AY282804|Gabpb1|14391|GA repeat binding protein, beta 1	AK146373|Gabpb1|14391|GA repeat binding protein, beta 1	M74517|Gabpb1|14391|GA repeat binding protein, beta 1	NM_010249|Gabpb1|14391|GA repeat binding protein, beta 1	M74516|Gabpb1|14391|GA repeat binding protein, beta 1	NM_207669|Gabpb1|14391|GA repeat binding protein, beta 1	AK140907|Gabpb1|14391|GA repeat binding protein, beta 1	AK140222|Gabpb1|14391|GA repeat binding protein, beta 1	AK052828|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr3_+_102862151_102862295	2.51045	RUNX1..3.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr11_-_51457826_51457921	2.50946	RUNX1..3.p2	BC005767|N4bp3|212706|NEDD4 binding protein 3
mm9_v1_chr5_-_92757021_92757142	2.50674	RUNX1..3.p2	AK042480|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	CT010194|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	BC003343|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157109|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK042017|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156012|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156029|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156453|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157118|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	NM_008599|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	M34815|Cxcl9|17329|chemokine (C-X-C motif) ligand 9
mm9_v1_chr8_+_13405080_13405105	2.48937	RUNX1..3.p2	BC096611|Grk1|24013|G protein-coupled receptor kinase 1	NM_011881|Grk1|24013|G protein-coupled receptor kinase 1	BC075722|Grk1|24013|G protein-coupled receptor kinase 1
mm9_v1_chr13_+_37917906_37917945	2.47808	RUNX1..3.p2	NM_026830|Rreb1|68750|ras responsive element binding protein 1	AK154980|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr4_+_53838895_53838980	2.47107	RUNX1..3.p2	NM_028053|Tmem38b|52076|transmembrane protein 38B	AK005479|Tmem38b|52076|transmembrane protein 38B	BC011072|Tmem38b|52076|transmembrane protein 38B	AK150377|Tmem38b|52076|transmembrane protein 38B	AK150892|Tmem38b|52076|transmembrane protein 38B	AK153075|Tmem38b|52076|transmembrane protein 38B	AB261159|Tmem38b|52076|transmembrane protein 38B
mm9_v1_chr10_+_58834161_58834363	2.45833	RUNX1..3.p2	AK178926|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	AK212609|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm9_v1_chr1_-_157820302_157820320	2.45516	RUNX1..3.p2	BC019716|Cep350|74081|centrosomal protein 350
mm9_v1_chr7_+_107641884_107641945	2.45313	RUNX1..3.p2	BC012697|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	U69135|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	U94593|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)
mm9_v1_chr7_-_127038916_127038971	2.45096	RUNX1..3.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr11_-_76891909_76891951	2.44864	RUNX1..3.p2	BC016601|Ccdc55|237859|coiled-coil domain containing 55	AK041865|Ccdc55|237859|coiled-coil domain containing 55	AK046155|Ccdc55|237859|coiled-coil domain containing 55	AK078762|Ccdc55|237859|coiled-coil domain containing 55	AK162143|Ccdc55|237859|coiled-coil domain containing 55	AK168573|Ccdc55|237859|coiled-coil domain containing 55	AK078945|Ccdc55|237859|coiled-coil domain containing 55	AK162990|Ccdc55|237859|coiled-coil domain containing 55	NM_001012309|Ccdc55|237859|coiled-coil domain containing 55	AK038056|Ccdc55|237859|coiled-coil domain containing 55	AK161058|Ccdc55|237859|coiled-coil domain containing 55
mm9_v1_chr8_+_87607167_87607182	2.43448	RUNX1..3.p2	NM_010764|Man2b1|17159|mannosidase 2, alpha B1	AK169830|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr5_-_143666064_143666381	2.4274	RUNX1..3.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr10_+_80392814_80392835	2.42461	RUNX1..3.p2	AK154952|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK010420|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK149895|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	BC023815|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	NM_008655|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	X54149|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta
mm9_v1_chr10_+_87553816_87553819	2.42165	RUNX1..3.p2	AK138363|Pmch|110312|pro-melanin-concentrating hormone	BC048534|Pmch|110312|pro-melanin-concentrating hormone	NM_029971|Pmch|110312|pro-melanin-concentrating hormone	AK020723|Pmch|110312|pro-melanin-concentrating hormone
mm9_v1_chrX_+_35474016_35474016	2.42118	RUNX1..3.p2	NM_001185002|Rhox13|73614|reproductive homeobox 13
mm9_v1_chr1_+_90108533_90108573	2.4194	RUNX1..3.p2	AY227194|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	NM_201645|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	L02333|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	S64760|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	BC093516|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1
mm9_v1_chr18_-_32719516_32719687	2.38286	RUNX1..3.p2	AK002769|Gypc|71683|glycophorin C	AK082930|Gypc|71683|glycophorin C	AK152607|Gypc|71683|glycophorin C	AK159730|Gypc|71683|glycophorin C	BC027408|Gypc|71683|glycophorin C	AK089652|Gypc|71683|glycophorin C	AY234183|Gypc|71683|glycophorin C	NM_001048207|Gypc|71683|glycophorin C
mm9_v1_chr9_-_40812668_40812668	2.38082	RUNX1..3.p2	AF001104|Crtam|54698|cytotoxic and regulatory T cell molecule	BC117715|Crtam|54698|cytotoxic and regulatory T cell molecule	BC117716|Crtam|54698|cytotoxic and regulatory T cell molecule	NM_019465|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr13_+_96466807_96466919	2.38057	RUNX1..3.p2	AK135212|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	NM_010170|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	U92972|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	AK089444|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	BC140985|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2
mm9_v1_chr7_-_55711614_55711711	2.37686	RUNX1..3.p2	AK148052|Mrgprb1|233231|MAS-related GPR, member B1	AK148166|Mrgprb1|233231|MAS-related GPR, member B1	AK148388|Mrgprb1|233231|MAS-related GPR, member B1	AK148046|Mrgprb1|233231|MAS-related GPR, member B1	AK148241|Mrgprb1|233231|MAS-related GPR, member B1	AK148108|Mrgprb1|233231|MAS-related GPR, member B1	AK148322|Mrgprb1|233231|MAS-related GPR, member B1	AK148279|Mrgprb1|233231|MAS-related GPR, member B1	AK148273|Mrgprb1|233231|MAS-related GPR, member B1	AK148044|Mrgprb1|233231|MAS-related GPR, member B1	AK148253|Mrgprb1|233231|MAS-related GPR, member B1	AK148256|Mrgprb1|233231|MAS-related GPR, member B1	AK148074|Mrgprb1|233231|MAS-related GPR, member B1	AK148114|Mrgprb1|233231|MAS-related GPR, member B1	NM_205810|Mrgprb1|233231|MAS-related GPR, member B1
mm9_v1_chr14_-_32454060_32454136	2.37643	RUNX1..3.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr5_+_65221116_65221144	2.37138	RUNX1..3.p2	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr2_-_173044305_173044431	2.36732	RUNX1..3.p2	AK008179|Zbp1|58203|Z-DNA binding protein 1	AX775969|Zbp1|58203|Z-DNA binding protein 1	AX775971|Zbp1|58203|Z-DNA binding protein 1	AF136520|Zbp1|58203|Z-DNA binding protein 1	BC020033|Zbp1|58203|Z-DNA binding protein 1	AK157215|Zbp1|58203|Z-DNA binding protein 1	NM_001139519|Zbp1|58203|Z-DNA binding protein 1	NM_021394|Zbp1|58203|Z-DNA binding protein 1
mm9_v1_chr11_+_94426706_94426792	2.36527	RUNX1..3.p2	AK160489|Chad|12643|chondroadherin
mm9_v1_chr11_+_72904084_72904096	2.36443	RUNX1..3.p2	U12236|Itgae|16407|integrin alpha E, epithelial-associated	AK040983|Itgae|16407|integrin alpha E, epithelial-associated	AK154021|Itgae|16407|integrin alpha E, epithelial-associated	BC150690|Itgae|16407|integrin alpha E, epithelial-associated	DQ386608|Itgae|16407|integrin alpha E, epithelial-associated	NM_008399|Itgae|16407|integrin alpha E, epithelial-associated	NM_172944|Itgae|16407|integrin alpha E, epithelial-associated
mm9_v1_chrX_+_35548300_35548338	2.36004	RUNX1..3.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr17_+_56850731_56850957	2.35925	RUNX1..3.p2	AK204937|Ranbp3|71810|RAN binding protein 3
mm9_v1_chr7_+_52112520_52112725	2.35677	RUNX1..3.p2	AK160160|Pnkp|59047|polynucleotide kinase 3'- phosphatase	NM_021549|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC047269|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK049992|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK172558|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC057659|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr10_+_19311761_19311893	2.35509	RUNX1..3.p2	NM_010511|Ifngr1|15979|interferon gamma receptor 1	AK087525|Ifngr1|15979|interferon gamma receptor 1	M26711|Ifngr1|15979|interferon gamma receptor 1	M28233|Ifngr1|15979|interferon gamma receptor 1	AK169593|Ifngr1|15979|interferon gamma receptor 1	J05265|Ifngr1|15979|interferon gamma receptor 1	AK151079|Ifngr1|15979|interferon gamma receptor 1	AK159359|Ifngr1|15979|interferon gamma receptor 1	AF128216|Ifngr1|15979|interferon gamma receptor 1	AF128217|Ifngr1|15979|interferon gamma receptor 1	AY157836|Ifngr1|15979|interferon gamma receptor 1	AY157837|Ifngr1|15979|interferon gamma receptor 1	AK153347|Ifngr1|15979|interferon gamma receptor 1	AK150503|Ifngr1|15979|interferon gamma receptor 1	AK152085|Ifngr1|15979|interferon gamma receptor 1	AK152384|Ifngr1|15979|interferon gamma receptor 1	AK153084|Ifngr1|15979|interferon gamma receptor 1	BC132599|Ifngr1|15979|interferon gamma receptor 1	BC138617|Ifngr1|15979|interferon gamma receptor 1	M25764|Ifngr1|15979|interferon gamma receptor 1	AK159660|Ifngr1|15979|interferon gamma receptor 1	AK159839|Ifngr1|15979|interferon gamma receptor 1	M28995|Ifngr1|15979|interferon gamma receptor 1
mm9_v1_chr8_+_87607186_87607233	2.35315	RUNX1..3.p2	AK004817|Man2b1|17159|mannosidase 2, alpha B1	AK088826|Man2b1|17159|mannosidase 2, alpha B1	AK171166|Man2b1|17159|mannosidase 2, alpha B1	AK147928|Man2b1|17159|mannosidase 2, alpha B1	AK035551|Man2b1|17159|mannosidase 2, alpha B1	U29947|Man2b1|17159|mannosidase 2, alpha B1	BC005430|Man2b1|17159|mannosidase 2, alpha B1	U87240|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr16_+_20128178_20128320	2.35103	RUNX1..3.p2	AK004187|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr5_+_141083273_141083363	2.34986	RUNX1..3.p2	BC138600|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	BC138601|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	AK004642|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	AK153283|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	NM_008494|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	U94351|Lfng|16848|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm9_v1_chr1_-_93309713_93309830	2.34869	RUNX1..3.p2	AF247040|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK146192|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AB035178|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AF260236|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	BC012897|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK013443|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK005022|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK155340|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK012582|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK076135|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	NM_019479|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK007480|Hes6|55927|hairy and enhancer of split 6 (Drosophila)
mm9_v1_chr2_-_84567398_84567416	2.34656	RUNX1..3.p2	AK145209|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK077647|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr19_+_10652212_10652359	2.34189	RUNX1..3.p2	BC065078|Cybasc3|225912|cytochrome b, ascorbate dependent 3	NM_201351|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr11_-_70051081_70051130	2.34127	RUNX1..3.p2	
mm9_v1_chr11_-_99855307_99855307	2.33774	RUNX1..3.p2	AK020698|Krtap17-1|77914|keratin associated protein 17-1	NM_001099774|Krtap17-1|77914|keratin associated protein 17-1
mm9_v1_chrX_-_71469244_71469317	2.3361	RUNX1..3.p2	AF119149|Flna|192176|filamin, alpha
mm9_v1_chr2_-_155555105_155555210	2.33516	RUNX1..3.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr11_-_102331042_102331196	2.32667	RUNX1..3.p2	AK158443|Itga2b|16399|integrin alpha 2b	BC120493|Itga2b|16399|integrin alpha 2b	BC137570|Itga2b|16399|integrin alpha 2b	AK157012|Itga2b|16399|integrin alpha 2b	AF166384|Itga2b|16399|integrin alpha 2b	AF170316|Itga2b|16399|integrin alpha 2b	AK142289|Itga2b|16399|integrin alpha 2b	AK156872|Itga2b|16399|integrin alpha 2b	AK154619|Itga2b|16399|integrin alpha 2b	NM_010575|Itga2b|16399|integrin alpha 2b
mm9_v1_chr2_+_162758440_162758589	2.32439	RUNX1..3.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr13_+_105077914_105078054	2.31007	RUNX1..3.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr2_+_125691964_125692075	2.30737	RUNX1..3.p2	AK171939|Galk2|69976|galactokinase 2	BC079843|Galk2|69976|galactokinase 2	AK053002|Galk2|69976|galactokinase 2	AK154762|Galk2|69976|galactokinase 2	AK176923|Galk2|69976|galactokinase 2	AK209145|Galk2|69976|galactokinase 2
mm9_v1_chr9_+_14589080_14589119	2.30687	RUNX1..3.p2	U58987|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	U60318|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168208|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146234|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146370|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168180|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)
mm9_v1_chr16_-_94509462_94509462	2.30396	RUNX1..3.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr17_+_29497858_29498034	2.28996	RUNX1..3.p2	AK042260|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_001159538|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_013710|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AK156151|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AF017368|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	DQ344523|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2
mm9_v1_chr11_-_53113682_53113812	2.28725	RUNX1..3.p2	D85904|Hspa4|15525|heat shock protein 4
mm9_v1_chr15_+_80453912_80453951	2.28648	RUNX1..3.p2	AF055465|Grap2|17444|GRB2-related adaptor protein 2	NM_010815|Grap2|17444|GRB2-related adaptor protein 2	AK156939|Grap2|17444|GRB2-related adaptor protein 2	AJ011735|Grap2|17444|GRB2-related adaptor protein 2	AF129477|Grap2|17444|GRB2-related adaptor protein 2	AF236118|Grap2|17444|GRB2-related adaptor protein 2
mm9_v1_chr7_-_36181628_36181850	2.28578	RUNX1..3.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr11_+_87912709_87912809	2.27726	RUNX1..3.p2	BC025434|Cuedc1|103841|CUE domain containing 1	BC024476|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr11_-_120421805_120421818	2.27555	RUNX1..3.p2	AK196256|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK201336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr10_-_80259390_80259483	2.27174	RUNX1..3.p2	AK188371|Plekhj1|78670|pleckstrin homology domain containing, family J member 1	AK177003|Plekhj1|78670|pleckstrin homology domain containing, family J member 1
mm9_v1_chr2_-_87814819_87814819	2.26467	RUNX1..3.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr3_+_102931478_102931478	2.26298	RUNX1..3.p2	BC060666|Dennd2c|329727|DENN/MADD domain containing 2C	NM_177857|Dennd2c|329727|DENN/MADD domain containing 2C
mm9_v1_chr16_+_17980657_17980657	2.25905	RUNX1..3.p2	NM_016983|Vpreb2|22363|pre-B lymphocyte gene 2
mm9_v1_chr6_+_143115732_143115821	2.24974	RUNX1..3.p2	AK051039|Etnk1|75320|ethanolamine kinase 1	AK044502|Etnk1|75320|ethanolamine kinase 1	NM_029250|Etnk1|75320|ethanolamine kinase 1	AK016135|Etnk1|75320|ethanolamine kinase 1	AK031560|Etnk1|75320|ethanolamine kinase 1	AK033268|Etnk1|75320|ethanolamine kinase 1	AK164928|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr6_+_91706816_91706893	2.24318	RUNX1..3.p2	AK165837|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr1_+_40497472_40497552	2.2408	RUNX1..3.p2	NM_001025602|Il1rl1|17082|interleukin 1 receptor-like 1	D13695|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chrX_-_154036557_154036600	2.24019	RUNX1..3.p2	BC038343|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK036071|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK164486|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK047841|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr16_-_58872973_58872973	2.22794	RUNX1..3.p2	NM_146993|Olfr176|258995|olfactory receptor 176	NM_146996|Olfr177|258998|olfactory receptor 177
mm9_v1_chr9_-_37240759_37240759	2.22709	RUNX1..3.p2	NM_001164767|Robo3|19649|roundabout homolog 3 (Drosophila)
mm9_v1_chr11_-_70051361_70051426	2.22656	RUNX1..3.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr3_+_90318894_90318921	2.21866	RUNX1..3.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr1_-_165015800_165015800	2.2106	RUNX1..3.p2	AK019544|4921528O07Rik|78258|RIKEN cDNA 4921528O07 gene	NM_030071|4921528O07Rik|78258|RIKEN cDNA 4921528O07 gene
mm9_v1_chr2_-_30816439_30816626	2.2095	RUNX1..3.p2	
mm9_v1_chr1_-_172797866_172797977	2.20864	RUNX1..3.p2	AK020270|Atf6|226641|activating transcription factor 6	AK087000|Atf6|226641|activating transcription factor 6	AK036106|Atf6|226641|activating transcription factor 6	BC141028|Atf6|226641|activating transcription factor 6	AK036335|Atf6|226641|activating transcription factor 6	NM_001081304|Atf6|226641|activating transcription factor 6
mm9_v1_chr2_+_154839149_154839305	2.20614	RUNX1..3.p2	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chr13_-_74631342_74631441	2.19959	RUNX1..3.p2	BC119319|Zfp825|235956|zinc finger protein 825	BC012278|Zfp825|235956|zinc finger protein 825	NM_146231|Zfp825|235956|zinc finger protein 825
mm9_v1_chr11_-_118263125_118263276	2.19932	RUNX1..3.p2	AK152182|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK155031|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK137836|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	L16894|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	BC090658|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	NM_011150|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	X67809|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153313|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153396|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK079915|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK150021|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein
mm9_v1_chr4_-_124804291_124804295	2.19519	RUNX1..3.p2	AY920404|Zc3h12a|230738|zinc finger CCCH type containing 12A
mm9_v1_chr2_+_17976897_17976897	2.19072	RUNX1..3.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr8_+_68141935_68142010	2.186	RUNX1..3.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr4_+_47366162_47366183	2.18442	RUNX1..3.p2	BC063260|Tgfbr1|21812|transforming growth factor, beta receptor I	NM_009370|Tgfbr1|21812|transforming growth factor, beta receptor I	D25540|Tgfbr1|21812|transforming growth factor, beta receptor I	CT010393|Tgfbr1|21812|transforming growth factor, beta receptor I	D28526|Tgfbr1|21812|transforming growth factor, beta receptor I
mm9_v1_chr11_+_94981430_94981448	2.1587	RUNX1..3.p2	NM_010055|Dlx3|13393|distal-less homeobox 3	BC058852|Dlx3|13393|distal-less homeobox 3
mm9_v1_chr1_+_70772288_70772496	2.1566	RUNX1..3.p2	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chr2_-_101489613_101489698	2.15434	RUNX1..3.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr11_-_115560691_115560842	2.13136	RUNX1..3.p2	AK077750|Grb2|14784|growth factor receptor bound protein 2	AK079087|Grb2|14784|growth factor receptor bound protein 2	AK153557|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr19_+_8692485_8692668	2.12862	RUNX1..3.p2	NM_008766|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	BC021647|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	U52842|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	AK035971|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6
mm9_v1_chr6_+_140602773_140602776	2.12161	RUNX1..3.p2	AK050137|Aebp2|11569|AE binding protein 2
mm9_v1_chr6_-_70067577_70067640	2.11695	RUNX1..3.p2	M95574|Gm10883|384419|predicted gene 10883
mm9_v1_chr10_+_80657435_80657438	2.11633	RUNX1..3.p2	AK084504|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK136697|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK009897|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK033837|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene
mm9_v1_chr2_+_6273778_6273781	2.11113	RUNX1..3.p2	BC051184|Usp6nl|98910|USP6 N-terminal like	NM_181399|Usp6nl|98910|USP6 N-terminal like
mm9_v1_chr4_+_133624366_133624437	2.11105	RUNX1..3.p2	AK145690|Aim1l|230806|absent in melanoma 1-like	NM_001162970|Aim1l|230806|absent in melanoma 1-like	BC150738|Aim1l|230806|absent in melanoma 1-like
mm9_v1_chr19_-_34549624_34549641	2.10736	RUNX1..3.p2	AF059213|Ch25h|12642|cholesterol 25-hydroxylase	NM_009890|Ch25h|12642|cholesterol 25-hydroxylase	AK152770|Ch25h|12642|cholesterol 25-hydroxylase	AK160657|Ch25h|12642|cholesterol 25-hydroxylase	AK140360|Ch25h|12642|cholesterol 25-hydroxylase
mm9_v1_chr9_+_94570310_94570389	2.10576	RUNX1..3.p2	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr11_-_99459418_99459419	2.10355	RUNX1..3.p2	AK009730|Krtap9-3|75586|keratin associated protein 9-3	AK131927|Krtap9-3|75586|keratin associated protein 9-3	NM_029351|Krtap9-3|75586|keratin associated protein 9-3
mm9_v1_chr5_+_89194155_89194268	2.09979	RUNX1..3.p2	AK048347|Dck|13178|deoxycytidine kinase	AK088195|Dck|13178|deoxycytidine kinase	AK151851|Dck|13178|deoxycytidine kinase	AK004592|Dck|13178|deoxycytidine kinase	AK010700|Dck|13178|deoxycytidine kinase	X77731|Dck|13178|deoxycytidine kinase
mm9_v1_chr2_+_127164374_127164374	2.09026	RUNX1..3.p2	AK033037|Astl|215095|astacin-like metalloendopeptidase (M12 family)	NM_172539|Astl|215095|astacin-like metalloendopeptidase (M12 family)
mm9_v1_chr8_-_108375786_108375962	2.08341	RUNX1..3.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr10_-_117229719_117229775	2.08339	RUNX1..3.p2	AK133938|Nup107|103468|nucleoporin 107	BC057591|Nup107|103468|nucleoporin 107	AK088625|Nup107|103468|nucleoporin 107	AK088303|Nup107|103468|nucleoporin 107	BC092261|Nup107|103468|nucleoporin 107	AK043454|Nup107|103468|nucleoporin 107	AK161665|Nup107|103468|nucleoporin 107	AK088069|Nup107|103468|nucleoporin 107	NM_134010|Nup107|103468|nucleoporin 107
mm9_v1_chr4_+_136166351_136166390	2.08055	RUNX1..3.p2	AK016074|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	NM_026300|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	BC048442|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	AK015053|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene
mm9_v1_chr11_-_70068773_70068785	2.07782	RUNX1..3.p2	U04334|Alox12|11684|arachidonate 12-lipoxygenase	AK036960|Alox12|11684|arachidonate 12-lipoxygenase
mm9_v1_chr7_+_71432538_71432641	2.07739	RUNX1..3.p2	AK088715|Mtmr10|233315|myotubularin related protein 10	NM_172742|Mtmr10|233315|myotubularin related protein 10	BC041672|Mtmr10|233315|myotubularin related protein 10
mm9_v1_chr18_-_55149819_55149833	2.05383	RUNX1..3.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr5_-_99681835_99681949	2.0526	RUNX1..3.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr4_-_119211373_119211373	2.03652	RUNX1..3.p2	BC076608|AA415398|433752|expressed sequence AA415398	NM_001004178|AA415398|433752|expressed sequence AA415398
mm9_v1_chr15_-_74942109_74942378	2.03213	RUNX1..3.p2	M18466|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	D86232|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	BC092082|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	NM_001099217|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2
mm9_v1_chr17_-_56084664_56084681	2.02403	RUNX1..3.p2	BC137918|Zfp119b|240120|zinc finger protein 119b	BC137919|Zfp119b|240120|zinc finger protein 119b	BC031441|Zfp119b|240120|zinc finger protein 119b	NM_146249|Zfp119b|240120|zinc finger protein 119b
mm9_v1_chr11_+_68316520_68316601	2.02154	RUNX1..3.p2	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr3_+_89580481_89580505	2.02138	RUNX1..3.p2	BC060966|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr19_-_7877136_7877156	2.02125	RUNX1..3.p2	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr9_+_44884261_44884391	2.01993	RUNX1..3.p2	
mm9_v1_chr12_-_70298068_70298133	2.01334	RUNX1..3.p2	AK075648|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK172494|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	EU599049|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK012767|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC058344|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK154254|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene
mm9_v1_chr10_-_86470647_86470766	2.01215	RUNX1..3.p2	BC145110|Stab2|192188|stabilin 2	DQ786775|Stab2|192188|stabilin 2	AF364951|Stab2|192188|stabilin 2	NM_138673|Stab2|192188|stabilin 2	AK164675|Stab2|192188|stabilin 2
mm9_v1_chr14_-_70751120_70751274	2.00995	RUNX1..3.p2	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr13_-_67585160_67585193	2.00947	RUNX1..3.p2	AK137581|Zfp874b|408067|zinc finger protein 874b	NM_001076791|Zfp874b|408067|zinc finger protein 874b	AK079330|Zfp874b|408067|zinc finger protein 874b
mm9_v1_chr2_-_28418881_28418904	2.00513	RUNX1..3.p2	NM_009885|Cel|12613|carboxyl ester lipase	U33169|Cel|12613|carboxyl ester lipase	U37386|Cel|12613|carboxyl ester lipase	BC006872|Cel|12613|carboxyl ester lipase	AK131818|Cel|12613|carboxyl ester lipase	AK131824|Cel|12613|carboxyl ester lipase	AK019028|Cel|12613|carboxyl ester lipase
mm9_v1_chr11_-_70051346_70051356	2.00384	RUNX1..3.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chrX_-_137077639_137077729	1.99458	RUNX1..3.p2	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr8_+_73222913_73223172	1.98033	RUNX1..3.p2	X15358|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr7_-_134530626_134530679	1.97768	RUNX1..3.p2	AK020267|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	BC031466|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	AK035847|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	NM_030226|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene
mm9_v1_chr5_-_34517575_34517643	1.9752	RUNX1..3.p2	
mm9_v1_chr8_-_72440219_72440255	1.97478	RUNX1..3.p2	BC031407|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr17_+_29839370_29839515	1.96727	RUNX1..3.p2	
mm9_v1_chr11_+_4157570_4157570	1.9606	RUNX1..3.p2	NM_008501|Lif|16878|leukemia inhibitory factor
mm9_v1_chr8_+_89240252_89240401	1.95937	RUNX1..3.p2	AK197630|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr3_-_88182614_88182620	1.9506	RUNX1..3.p2	BC145564|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	X04142|Bglap2|12097|bone gamma-carboxyglutamate protein 2	NM_001032298|Bglap2|12097|bone gamma-carboxyglutamate protein 2
mm9_v1_chr11_+_20991293_20991320	1.94513	RUNX1..3.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr14_+_69789858_69790075	1.93559	RUNX1..3.p2	AF045150|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC132558|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC139035|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK006401|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC100425|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AF030113|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK007304|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	NM_010920|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)
mm9_v1_chr3_+_69525922_69526018	1.93463	RUNX1..3.p2	AK145248|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK088667|Nmd3|97112|NMD3 homolog (S. cerevisiae)	BC003842|Nmd3|97112|NMD3 homolog (S. cerevisiae)	NM_133787|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK198106|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK166283|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK143289|Nmd3|97112|NMD3 homolog (S. cerevisiae)
mm9_v1_chr10_-_80129430_80129498	1.93418	RUNX1..3.p2	AK194912|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK189980|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK196822|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK202566|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK204946|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr10_+_80611198_80611320	1.93365	RUNX1..3.p2	AK078088|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr18_-_32297813_32297870	1.93328	RUNX1..3.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr18_+_21119972_21120137	1.92901	RUNX1..3.p2	AK016103|Rnf125|67664|ring finger protein 125	AB259692|Rnf125|67664|ring finger protein 125
mm9_v1_chr7_-_134550257_134550335	1.92887	RUNX1..3.p2	BC026397|Zfp764|233893|zinc finger protein 764	AK053795|Zfp764|233893|zinc finger protein 764	AK033218|Zfp764|233893|zinc finger protein 764	AK042873|Zfp764|233893|zinc finger protein 764	NM_001167832|Zfp764|233893|zinc finger protein 764	NM_146203|Zfp764|233893|zinc finger protein 764
mm9_v1_chr14_-_73109722_73109912	1.92434	RUNX1..3.p2	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr11_-_59319688_59319772	1.92231	RUNX1..3.p2	AK155196|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK170924|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK155490|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK157002|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK158448|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK051711|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK170989|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	AK171190|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17
mm9_v1_chr15_-_36538484_36538485	1.91596	RUNX1..3.p2	BC011207|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr6_+_106068758_106068758	1.9125	RUNX1..3.p2	AK043507|Cntn4|269784|contactin 4	NM_001109751|Cntn4|269784|contactin 4
mm9_v1_chr8_+_108225509_108225588	1.9115	RUNX1..3.p2	BC061114|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	AK158848|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	NM_001047435|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	NM_019695|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	BC049593|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	AK003030|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm9_v1_chr13_+_21902235_21902335	1.90967	RUNX1..3.p2	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap
mm9_v1_chr2_-_142727172_142727216	1.9075	RUNX1..3.p2	NM_001081133|Kif16b|16558|kinesin family member 16B
mm9_v1_chr1_-_53353810_53353878	1.90119	RUNX1..3.p2	AK045010|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	BC028939|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	NM_153556|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	AK140689|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)
mm9_v1_chr2_+_26934862_26934948	1.89773	RUNX1..3.p2	AK156991|Adamtsl2|77794|ADAMTS-like 2	AB096928|Adamtsl2|77794|ADAMTS-like 2	NM_029981|Adamtsl2|77794|ADAMTS-like 2	BC128568|Adamtsl2|77794|ADAMTS-like 2	BC129984|Adamtsl2|77794|ADAMTS-like 2
mm9_v1_chr9_-_19976012_19976012	1.89269	RUNX1..3.p2	NM_146904|Olfr870|57251|olfactory receptor 870
mm9_v1_chr19_-_5844533_5844701	1.88132	RUNX1..3.p2	AK191927|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	AK197973|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC095948|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC064019|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr16_+_15887375_15887382	1.87898	RUNX1..3.p2	AK053190|Cebpd|12609|CCAAT/enhancer binding protein (C/EBP), delta	AK151958|Cebpd|12609|CCAAT/enhancer binding protein (C/EBP), delta	AK156762|Cebpd|12609|CCAAT/enhancer binding protein (C/EBP), delta	BC139293|Cebpd|12609|CCAAT/enhancer binding protein (C/EBP), delta	NM_007679|Cebpd|12609|CCAAT/enhancer binding protein (C/EBP), delta
mm9_v1_chr11_+_70246079_70246238	1.87258	RUNX1..3.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr15_+_96199877_96199934	1.86974	RUNX1..3.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr15_+_97622089_97622513	1.86799	RUNX1..3.p2	AK205354|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK197454|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK214110|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK177009|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK188489|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK186060|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK215813|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK190346|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK203730|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK186268|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1
mm9_v1_chr9_-_106060406_106060468	1.86296	RUNX1..3.p2	AK052709|Glyctk|235582|glycerate kinase	BC036136|Glyctk|235582|glycerate kinase	BC025935|Glyctk|235582|glycerate kinase	AF455785|Glyctk|235582|glycerate kinase	BC025834|Glyctk|235582|glycerate kinase	BC033063|Glyctk|235582|glycerate kinase	AK049425|Glyctk|235582|glycerate kinase	AK050182|Glyctk|235582|glycerate kinase	NM_001039586|Glyctk|235582|glycerate kinase	NM_174846|Glyctk|235582|glycerate kinase
mm9_v1_chr17_+_8436671_8436678	1.85867	RUNX1..3.p2	NM_001190334|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_001190335|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_001190336|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_001190337|Ccr6|12458|chemokine (C-C motif) receptor 6	BC100756|Ccr6|12458|chemokine (C-C motif) receptor 6	BC100757|Ccr6|12458|chemokine (C-C motif) receptor 6	BC100758|Ccr6|12458|chemokine (C-C motif) receptor 6	BC105669|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr9_-_70504934_70505009	1.85317	RUNX1..3.p2	BC058683|Fam63b|235461|family with sequence similarity 63, member B	AK046623|Fam63b|235461|family with sequence similarity 63, member B	BC049357|Fam63b|235461|family with sequence similarity 63, member B	AK046403|Fam63b|235461|family with sequence similarity 63, member B	AK035930|Fam63b|235461|family with sequence similarity 63, member B	NM_172772|Fam63b|235461|family with sequence similarity 63, member B	AK220158|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr10_-_12587945_12588041	1.85113	RUNX1..3.p2	BC062163|Utrn|22288|utrophin	BC011062|Utrn|22288|utrophin
mm9_v1_chr13_+_119503505_119503505	1.85043	RUNX1..3.p2	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr5_-_25004598_25004626	1.84154	RUNX1..3.p2	AK044828|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	NM_001081383|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	AK087368|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr15_+_88582086_88582189	1.84034	RUNX1..3.p2	NM_181412|Zbed4|223773|zinc finger, BED domain containing 4	AK005794|Zbed4|223773|zinc finger, BED domain containing 4
mm9_v1_chr10_+_13272699_13272712	1.83928	RUNX1..3.p2	AK016938|Adat2|66757|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)	NM_025748|Adat2|66757|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
mm9_v1_chr6_-_69193672_69193737	1.837	RUNX1..3.p2	
mm9_v1_chr2_+_164774806_164774810	1.8335	RUNX1..3.p2	X72795|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr3_-_30408408_30408408	1.82921	RUNX1..3.p2	AJ010015|Mecom|14013|MDS1 and EVI1 complex locus	NM_021442|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr10_+_13273025_13273117	1.82872	RUNX1..3.p2	AK021291|Adat2|66757|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
mm9_v1_chr1_+_151947225_151947270	1.82457	RUNX1..3.p2	AK144956|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	AK149820|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	AK166221|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	AK172161|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	M64291|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	AK144726|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	M94967|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	M88242|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	NM_011198|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	AK049923|Ptgs2|19225|prostaglandin-endoperoxide synthase 2	BC052900|Ptgs2|19225|prostaglandin-endoperoxide synthase 2
mm9_v1_chr16_-_8738377_8738512	1.82151	RUNX1..3.p2	AF548565|Usp7|252870|ubiquitin specific peptidase 7	NM_001003918|Usp7|252870|ubiquitin specific peptidase 7	BC046963|Usp7|252870|ubiquitin specific peptidase 7
mm9_v1_chr2_+_158157639_158157652	1.81854	RUNX1..3.p2	AJ010499|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr8_+_11512952_11512959	1.81731	RUNX1..3.p2	AK217371|Carkd|69225|carbohydrate kinase domain containing
mm9_v1_chr8_+_48907496_48907496	1.8089	RUNX1..3.p2	NM_001111318|Cldn24|100039801|claudin 22-like
mm9_v1_chr4_+_123613778_123613862	1.80641	RUNX1..3.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr7_-_118214471_118214595	1.80134	RUNX1..3.p2	AK153701|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr7_-_105457979_105458055	1.7927	RUNX1..3.p2	AK150629|Acer3|66190|alkaline ceramidase 3	AK080977|Acer3|66190|alkaline ceramidase 3	AK011668|Acer3|66190|alkaline ceramidase 3	NM_025408|Acer3|66190|alkaline ceramidase 3	AK004287|Acer3|66190|alkaline ceramidase 3	AK162403|Acer3|66190|alkaline ceramidase 3
mm9_v1_chr2_-_91790504_91790533	1.78827	RUNX1..3.p2	AK087503|Dgkz|104418|diacylglycerol kinase zeta	NM_001166597|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr11_-_106576380_106576409	1.78645	RUNX1..3.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr11_+_20991321_20991416	1.78309	RUNX1..3.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr7_+_125883784_125883784	1.77818	RUNX1..3.p2	NM_027815|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene
mm9_v1_chr15_+_103129767_103129829	1.77711	RUNX1..3.p2	
mm9_v1_chr11_-_101828286_101828333	1.77272	RUNX1..3.p2	AF326740|Sost|74499|sclerostin	BC137832|Sost|74499|sclerostin	BC137833|Sost|74499|sclerostin	AK017295|Sost|74499|sclerostin	AK041382|Sost|74499|sclerostin	NM_024449|Sost|74499|sclerostin
mm9_v1_chr9_+_14589122_14589203	1.76865	RUNX1..3.p2	AK141214|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	BC065144|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	NM_018736|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK041248|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)
mm9_v1_chr6_-_142271469_142271500	1.76695	RUNX1..3.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr7_-_4676683_4676683	1.76301	RUNX1..3.p2	BC022651|Tmem150b|330460|transmembrane protein 150B	NM_001142792|Tmem150b|330460|transmembrane protein 150B
mm9_v1_chr11_-_106992869_106992950	1.75899	RUNX1..3.p2	BC037661|Bptf|207165|bromodomain PHD finger transcription factor	BC046973|Bptf|207165|bromodomain PHD finger transcription factor
mm9_v1_chr3_+_157610182_157610429	1.75739	RUNX1..3.p2	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr10_-_90545046_90545173	1.74087	RUNX1..3.p2	BC131683|Apaf1|11783|apoptotic peptidase activating factor 1	BC131684|Apaf1|11783|apoptotic peptidase activating factor 1	AK035569|Apaf1|11783|apoptotic peptidase activating factor 1
mm9_v1_chr4_-_143752454_143752553	1.738	RUNX1..3.p2	AY573563|Oog3|100012|oogenesin 3	BC053700|Oog3|100012|oogenesin 3	AK136030|Oog3|100012|oogenesin 3	NM_201258|Oog3|100012|oogenesin 3
mm9_v1_chr11_-_102152310_102152512	1.73571	RUNX1..3.p2	AK218190|Atxn7l3|217218|ataxin 7-like 3	AK053165|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chr1_-_138157449_138157449	1.7342	RUNX1..3.p2	NM_001101516|Gpr25|383563|G protein-coupled receptor 25
mm9_v1_chr17_+_35137995_35138088	1.73389	RUNX1..3.p2	AK157814|Vars|22321|valyl-tRNA synthetase	AK012123|Vars|22321|valyl-tRNA synthetase	AK154823|Vars|22321|valyl-tRNA synthetase	BC053703|Vars|22321|valyl-tRNA synthetase	AF087680|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr9_-_13631432_13631439	1.73076	RUNX1..3.p2	AK019414|Cep57|74360|centrosomal protein 57	AK167523|Cep57|74360|centrosomal protein 57
mm9_v1_chr6_+_100783598_100783865	1.72948	RUNX1..3.p2	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr7_+_149024974_149024976	1.72772	RUNX1..3.p2	AJ311906|Muc5b|74180|mucin 5, subtype B, tracheobronchial	AK037730|Muc5b|74180|mucin 5, subtype B, tracheobronchial	NM_028801|Muc5b|74180|mucin 5, subtype B, tracheobronchial
mm9_v1_chr1_-_175961813_175961885	1.72684	RUNX1..3.p2	AK040191|Ifi205|226695|interferon activated gene 205	BC055888|Ifi202b|26388|interferon activated gene 202B	BC018233|Ifi202b|26388|interferon activated gene 202B	BC040425|Ifi205|226695|interferon activated gene 205	NM_172648|Ifi205|226695|interferon activated gene 205
mm9_v1_chr5_+_142877515_142877558	1.71684	RUNX1..3.p2	AK144418|Foxk1|17425|forkhead box K1
mm9_v1_chrX_+_130842622_130842694	1.71585	RUNX1..3.p2	AK161473|Cenpi|102920|centromere protein I	AK043344|Cenpi|102920|centromere protein I
mm9_v1_chr7_-_118214192_118214323	1.70983	RUNX1..3.p2	AK037763|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr2_+_127680363_127680363	1.7087	RUNX1..3.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr7_+_97575023_97575086	1.70381	RUNX1..3.p2	BC060150|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr8_-_41393270_41393282	1.69262	RUNX1..3.p2	AK005145|1500004F05Rik|69765|RIKEN cDNA 1500004F05 gene
mm9_v1_chr2_-_84314191_84314337	1.68752	RUNX1..3.p2	AK167522|Tfpi|21788|tissue factor pathway inhibitor	AK028356|Tfpi|21788|tissue factor pathway inhibitor	NM_011576|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr6_-_57775039_57775171	1.68424	RUNX1..3.p2	BC024884|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK170152|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK170832|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK030975|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	BC024822|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	NM_146168|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK031812|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK158041|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK165256|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1
mm9_v1_chr11_-_115560620_115560673	1.68396	RUNX1..3.p2	D85748|Grb2|14784|growth factor receptor bound protein 2	U07617|Grb2|14784|growth factor receptor bound protein 2	AK170845|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr8_+_74120004_74120094	1.6829	RUNX1..3.p2	
mm9_v1_chr15_-_99079369_99079394	1.67526	RUNX1..3.p2	AK158611|Mcrs1|51812|microspherule protein 1
mm9_v1_chr3_-_127256215_127256266	1.66975	RUNX1..3.p2	BC023165|Larp7|28036|La ribonucleoprotein domain family, member 7	AK015041|Larp7|28036|La ribonucleoprotein domain family, member 7	AK012772|Larp7|28036|La ribonucleoprotein domain family, member 7	AK082815|Larp7|28036|La ribonucleoprotein domain family, member 7	NM_138593|Larp7|28036|La ribonucleoprotein domain family, member 7
mm9_v1_chr4_+_135728188_135728308	1.6662	RUNX1..3.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr5_-_65844386_65844460	1.65696	RUNX1..3.p2	BC029314|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chr8_-_72411261_72411294	1.65177	RUNX1..3.p2	BC006187|Cilp2|68709|cartilage intermediate layer protein 2	NM_026818|Cilp2|68709|cartilage intermediate layer protein 2
mm9_v1_chr9_+_65974417_65974646	1.65067	RUNX1..3.p2	AK077700|Fam96a|68250|family with sequence similarity 96, member A	NM_026635|Fam96a|68250|family with sequence similarity 96, member A	AK002690|Fam96a|68250|family with sequence similarity 96, member A	BC005745|Fam96a|68250|family with sequence similarity 96, member A	AK003870|Fam96a|68250|family with sequence similarity 96, member A	AK170445|Fam96a|68250|family with sequence similarity 96, member A	AK197739|Fam96a|68250|family with sequence similarity 96, member A
mm9_v1_chrX_-_133267605_133267741	1.64284	RUNX1..3.p2	
mm9_v1_chr6_-_13821449_13821517	1.64051	RUNX1..3.p2	BC070405|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK002763|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK011259|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK035027|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK136158|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK028169|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK152937|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene
mm9_v1_chr12_+_27154043_27154079	1.63907	RUNX1..3.p2	BC048910|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	NM_020557|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
mm9_v1_chr2_-_25349423_25349430	1.63104	RUNX1..3.p2	BC111100|Lcn12|77701|lipocalin 12	AY299493|Lcn12|77701|lipocalin 12	NM_029958|Lcn12|77701|lipocalin 12
mm9_v1_chr2_-_181022670_181022690	1.63093	RUNX1..3.p2	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr2_+_136725086_136725086	1.6268	RUNX1..3.p2	AK136226|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_001038641|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr18_+_61747381_61747495	1.62393	RUNX1..3.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr8_+_116167112_116167131	1.62294	RUNX1..3.p2	AY899935|Syce1l|668110|synaptonemal complex central element protein 1 like	AY899936|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141326|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141347|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_001048145|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_029139|Syce1l|668110|synaptonemal complex central element protein 1 like	AK015606|Syce1l|668110|synaptonemal complex central element protein 1 like	BC100478|Syce1l|668110|synaptonemal complex central element protein 1 like
mm9_v1_chr15_+_5093855_5093914	1.62264	RUNX1..3.p2	NM_001013367|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK160612|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK147811|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC086695|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AY885266|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm9_v1_chr5_+_142877419_142877473	1.61977	RUNX1..3.p2	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr2_+_74560034_74560034	1.61852	RUNX1..3.p2	NM_010469|Hoxd4|15436|homeobox D4
mm9_v1_chr9_-_65732843_65732979	1.61345	RUNX1..3.p2	AK078393|Trip4|56404|thyroid hormone receptor interactor 4	AK150752|Trip4|56404|thyroid hormone receptor interactor 4	BC021316|Trip4|56404|thyroid hormone receptor interactor 4	AK039024|Trip4|56404|thyroid hormone receptor interactor 4	AK146298|Trip4|56404|thyroid hormone receptor interactor 4	NM_001170907|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr5_+_130663030_130663049	1.60955	RUNX1..3.p2	AK044568|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	BC018229|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	NM_019983|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr15_+_76730338_76730405	1.60759	RUNX1..3.p2	AK013148|Commd5|66398|COMM domain containing 5	AK010045|Commd5|66398|COMM domain containing 5	NM_025536|Commd5|66398|COMM domain containing 5	BC025891|Commd5|66398|COMM domain containing 5
mm9_v1_chr11_-_23419100_23419194	1.60724	RUNX1..3.p2	AK007052|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene	BC049567|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene	NM_026105|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene
mm9_v1_chr2_+_118872854_118872888	1.60459	RUNX1..3.p2	AK009772|Casc5|76464|cancer susceptibility candidate 5	NM_029617|Casc5|76464|cancer susceptibility candidate 5	BC080815|Casc5|76464|cancer susceptibility candidate 5	AK033132|Casc5|76464|cancer susceptibility candidate 5
mm9_v1_chr4_-_43666412_43666469	1.60347	RUNX1..3.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chrX_+_130842701_130842725	1.60043	RUNX1..3.p2	NM_145924|Cenpi|102920|centromere protein I	AK145200|Cenpi|102920|centromere protein I	BC030328|Cenpi|102920|centromere protein I
mm9_v1_chr1_-_14299936_14300280	1.59534	RUNX1..3.p2	BC066860|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK045320|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK042412|Eya1|14048|eyes absent 1 homolog (Drosophila)	BC060260|Eya1|14048|eyes absent 1 homolog (Drosophila)	NM_010164|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK153788|Eya1|14048|eyes absent 1 homolog (Drosophila)
mm9_v1_chr14_-_17075814_17075844	1.59257	RUNX1..3.p2	BC118051|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	BC119793|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	AK034243|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	AK084829|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial
mm9_v1_chr17_+_28828286_28828455	1.58985	RUNX1..3.p2	BC012235|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168508|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168514|Mapk14|26416|mitogen-activated protein kinase 14	NM_011951|Mapk14|26416|mitogen-activated protein kinase 14	BC085303|Mapk14|26416|mitogen-activated protein kinase 14	AK089059|Mapk14|26416|mitogen-activated protein kinase 14	AK133684|Mapk14|26416|mitogen-activated protein kinase 14	AF128892|Mapk14|26416|mitogen-activated protein kinase 14	BC018227|Mapk14|26416|mitogen-activated protein kinase 14	U10871|Mapk14|26416|mitogen-activated protein kinase 14	D83073|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr19_-_38117813_38117907	1.58597	RUNX1..3.p2	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr11_+_117623703_117623821	1.57963	RUNX1..3.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chrX_+_103222548_103222685	1.57552	RUNX1..3.p2	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr12_+_27154180_27154275	1.5662	RUNX1..3.p2	BC027329|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK004595|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153469|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153429|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150543|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150885|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150725|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150512|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	BC057565|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
mm9_v1_chr12_+_59312790_59312790	1.56576	RUNX1..3.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr1_+_94807324_94807438	1.55823	RUNX1..3.p2	AK154881|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1	AK133751|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1
mm9_v1_chr8_+_9977716_9977791	1.54946	RUNX1..3.p2	NM_001081119|Abhd13|68904|abhydrolase domain containing 13	NM_026868|Abhd13|68904|abhydrolase domain containing 13
mm9_v1_chr1_-_172236462_172236462	1.54742	RUNX1..3.p2	NM_001198955|Gm7694|665574|predicted gene 7694
mm9_v1_chr14_+_56159102_56159102	1.54546	RUNX1..3.p2	AK030501|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)	NM_028994|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)
mm9_v1_chr14_+_66915903_66915912	1.54262	RUNX1..3.p2	AK031803|Trim35|66854|tripartite motif-containing 35	BC049105|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr1_+_133534852_133534935	1.54153	RUNX1..3.p2	AK083315|Ctse|13034|cathepsin E	AK040175|Ctse|13034|cathepsin E	BC005432|Ctse|13034|cathepsin E	NM_007799|Ctse|13034|cathepsin E
mm9_v1_chrX_+_159339465_159339507	1.53893	RUNX1..3.p2	NM_001168568|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr15_-_38008565_38008625	1.52194	RUNX1..3.p2	NM_001081359|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5	NM_001112721|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr3_+_95087357_95087526	1.51225	RUNX1..3.p2	AK179473|Fam63a|75007|family with sequence similarity 63, member A	AK213538|Fam63a|75007|family with sequence similarity 63, member A	AK213681|Fam63a|75007|family with sequence similarity 63, member A	AK215508|Fam63a|75007|family with sequence similarity 63, member A	AK218735|Fam63a|75007|family with sequence similarity 63, member A	AK195238|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr9_-_110892114_110892227	1.51072	RUNX1..3.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr12_-_104895293_104895303	1.50694	RUNX1..3.p2	BC013632|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr10_-_128133261_128133372	1.5049	RUNX1..3.p2	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr8_+_59800981_59801021	1.50295	RUNX1..3.p2	U43715|Hand2|15111|heart and neural crest derivatives expressed transcript 2
mm9_v1_chr5_+_124566075_124566149	1.50227	RUNX1..3.p2	AB035383|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4	NM_144509|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4	BC063748|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4
mm9_v1_chr1_+_75209788_75209798	1.50131	RUNX1..3.p2	AK177618|Stk16|20872|serine/threonine kinase 16
mm9_v1_chr16_-_16504310_16504310	1.50025	RUNX1..3.p2	AF402612|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139233|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4
mm9_v1_chr3_-_107357915_107357990	1.49978	RUNX1..3.p2	AK006408|Ubl4b|67591|ubiquitin-like 4B	BC048443|Ubl4b|67591|ubiquitin-like 4B	AK016746|Ubl4b|67591|ubiquitin-like 4B	BC061071|Ubl4b|67591|ubiquitin-like 4B	AK015868|Ubl4b|67591|ubiquitin-like 4B	NM_026261|Ubl4b|67591|ubiquitin-like 4B
mm9_v1_chrX_-_8553684_8553684	1.49617	RUNX1..3.p2	NM_001085525|Gm14511|434727|predicted gene 14511
mm9_v1_chr17_+_57388873_57388970	1.4955	RUNX1..3.p2	NM_134125|Trip10|106628|thyroid hormone receptor interactor 10	BC003249|Trip10|106628|thyroid hormone receptor interactor 10	AK149902|Trip10|106628|thyroid hormone receptor interactor 10	AY081142|Trip10|106628|thyroid hormone receptor interactor 10	AK088909|Trip10|106628|thyroid hormone receptor interactor 10	AF502565|Trip10|106628|thyroid hormone receptor interactor 10
mm9_v1_chr9_-_78327171_78327201	1.49309	RUNX1..3.p2	AK183068|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK185520|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK194927|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK196726|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK204373|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK208452|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK217934|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr19_-_4825413_4825555	1.4901	RUNX1..3.p2	
mm9_v1_chr2_+_80457201_80457422	1.48946	RUNX1..3.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr13_-_23663006_23663088	1.48553	RUNX1..3.p2	BC076498|Hist1h2ae|319166|histone cluster 1, H2ae	BC058544|Hist1h2ae|319166|histone cluster 1, H2ae	AK028026|Hist1h2ae|319166|histone cluster 1, H2ae	NM_178187|Hist1h2ae|319166|histone cluster 1, H2ae
mm9_v1_chr19_+_56362397_56362451	1.48213	RUNX1..3.p2	AK132407|Habp2|226243|hyaluronic acid binding protein 2	AK128915|Habp2|226243|hyaluronic acid binding protein 2	AK149504|Habp2|226243|hyaluronic acid binding protein 2	BC031775|Habp2|226243|hyaluronic acid binding protein 2	NM_146101|Habp2|226243|hyaluronic acid binding protein 2
mm9_v1_chr12_-_101397818_101397862	1.48212	RUNX1..3.p2	AK036688|BC002230|217827|cDNA sequence BC002230	AK032800|BC002230|217827|cDNA sequence BC002230	NM_183155|BC002230|217827|cDNA sequence BC002230
mm9_v1_chr10_-_60610238_60610394	1.48123	RUNX1..3.p2	AK036747|Sgpl1|20397|sphingosine phosphate lyase 1	AK150053|Sgpl1|20397|sphingosine phosphate lyase 1	AK173137|Sgpl1|20397|sphingosine phosphate lyase 1	AF036894|Sgpl1|20397|sphingosine phosphate lyase 1	BC026135|Sgpl1|20397|sphingosine phosphate lyase 1	AK037789|Sgpl1|20397|sphingosine phosphate lyase 1	AK043024|Sgpl1|20397|sphingosine phosphate lyase 1	AK049342|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr11_-_40562196_40562300	1.4756	RUNX1..3.p2	
mm9_v1_chr15_-_76029835_76029835	1.47223	RUNX1..3.p2	AF188021|Plec|18810|plectin	AY480041|Plec|18810|plectin	NM_201392|Plec|18810|plectin
mm9_v1_chr5_+_124566251_124566301	1.46906	RUNX1..3.p2	AK133934|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4
mm9_v1_chr10_-_85474581_85474639	1.46548	RUNX1..3.p2	BC112376|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK028764|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	NM_177772|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK132518|Bpil2|270757|bactericidal/permeability-increasing protein-like 2
mm9_v1_chr11_+_67051128_67051361	1.45387	RUNX1..3.p2	DQ066415|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066416|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066417|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AK138608|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AY963801|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066418|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr8_-_88063071_88063191	1.4532	RUNX1..3.p2	
mm9_v1_chr11_+_70542670_70542679	1.45304	RUNX1..3.p2	AK159143|Kif1c|16562|kinesin family member 1C	AK164832|Kif1c|16562|kinesin family member 1C
mm9_v1_chr17_+_56031515_56031689	1.45193	RUNX1..3.p2	NM_145490|Zfp959|224893|zinc finger protein 959	BC011426|Zfp959|224893|zinc finger protein 959	BC138466|Zfp959|224893|zinc finger protein 959	BC138467|Zfp959|224893|zinc finger protein 959
mm9_v1_chr10_+_80642896_80643136	1.44724	RUNX1..3.p2	AK210872|Eef2|13629|eukaryotic translation elongation factor 2	AK209228|Eef2|13629|eukaryotic translation elongation factor 2	AK202124|Eef2|13629|eukaryotic translation elongation factor 2	AK187806|Eef2|13629|eukaryotic translation elongation factor 2	AK193965|Eef2|13629|eukaryotic translation elongation factor 2	AK198543|Eef2|13629|eukaryotic translation elongation factor 2	AK199188|Eef2|13629|eukaryotic translation elongation factor 2	AK199799|Eef2|13629|eukaryotic translation elongation factor 2	AK203090|Eef2|13629|eukaryotic translation elongation factor 2	AK205853|Eef2|13629|eukaryotic translation elongation factor 2	AK207466|Eef2|13629|eukaryotic translation elongation factor 2	AK216165|Eef2|13629|eukaryotic translation elongation factor 2	AK216384|Eef2|13629|eukaryotic translation elongation factor 2	AK205723|Eef2|13629|eukaryotic translation elongation factor 2	AK164406|Eef2|13629|eukaryotic translation elongation factor 2	AK189872|Eef2|13629|eukaryotic translation elongation factor 2	AK195340|Eef2|13629|eukaryotic translation elongation factor 2	AK206829|Eef2|13629|eukaryotic translation elongation factor 2	AK207351|Eef2|13629|eukaryotic translation elongation factor 2	AK211185|Eef2|13629|eukaryotic translation elongation factor 2	AK217298|Eef2|13629|eukaryotic translation elongation factor 2	AK217627|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr12_-_114568509_114568734	1.44685	RUNX1..3.p2	V00775|Ighg1|16017|immunoglobulin heavy constant gamma 1 (G1m marker)
mm9_v1_chr3_+_135101248_135101271	1.44541	RUNX1..3.p2	AK167138|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK003163|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009276|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009936|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr8_-_125099344_125099382	1.43807	RUNX1..3.p2	AK186097|Aprt|11821|adenine phosphoribosyl transferase	AK188762|Aprt|11821|adenine phosphoribosyl transferase
mm9_v1_chr13_-_67198911_67198911	1.43549	RUNX1..3.p2	NM_001012325|Zfp708|432769|zinc finger protein 708	NM_001012449|Zfp708|432769|zinc finger protein 708
mm9_v1_chr9_+_110666178_110666184	1.43537	RUNX1..3.p2	AK146943|Myl3|17897|myosin, light polypeptide 3	BC061222|Myl3|17897|myosin, light polypeptide 3	AK002312|Myl3|17897|myosin, light polypeptide 3	NM_010859|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr13_-_23557675_23557769	1.43059	RUNX1..3.p2	AK142596|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC011497|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC009817|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK021333|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK145168|Btn1a1|12231|butyrophilin, subfamily 1, member A1	NM_013483|Btn1a1|12231|butyrophilin, subfamily 1, member A1
mm9_v1_chr13_+_9171776_9171813	1.42574	RUNX1..3.p2	AK148903|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr8_+_123209286_123209298	1.42287	RUNX1..3.p2	
mm9_v1_chr14_-_49686341_49686379	1.42079	RUNX1..3.p2	NM_207214|Exoc5|105504|exocyst complex component 5
mm9_v1_chr12_-_111920809_111920828	1.41854	RUNX1..3.p2	BC048462|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK005606|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK006358|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	AK006098|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene	NM_025488|1700001K19Rik|66323|RIKEN cDNA 1700001K19 gene
mm9_v1_chr13_-_27872632_27872672	1.41768	RUNX1..3.p2	BC099442|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AK014436|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AF525157|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AK005486|Prl7c1|67505|prolactin family 7, subfamily c, member 1	NM_026206|Prl7c1|67505|prolactin family 7, subfamily c, member 1
mm9_v1_chr10_-_60610398_60610452	1.40676	RUNX1..3.p2	NM_009163|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr3_+_90318260_90318356	1.4016	RUNX1..3.p2	BC005687|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr11_-_70468130_70468151	1.39961	RUNX1..3.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr3_+_90318681_90318681	1.39902	RUNX1..3.p2	NM_009113|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr12_-_55896488_55896574	1.39788	RUNX1..3.p2	BC025911|Snx6|72183|sorting nexin 6
mm9_v1_chr4_-_125933482_125933589	1.39773	RUNX1..3.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chr9_-_109098475_109098488	1.39653	RUNX1..3.p2	BC119542|Fbxw13|211305|F-box and WD-40 domain protein 13	BC127237|Fbxw13|211305|F-box and WD-40 domain protein 13	AK054339|Fbxw13|211305|F-box and WD-40 domain protein 13	NM_177598|Fbxw13|211305|F-box and WD-40 domain protein 13
mm9_v1_chr4_+_134420419_134420535	1.39246	RUNX1..3.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr7_+_114738564_114738564	1.39061	RUNX1..3.p2	NM_008905|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr4_+_86394436_86394546	1.38938	RUNX1..3.p2	AK155220|Dennd4c|329877|DENN/MADD domain containing 4C	NM_001081014|Dennd4c|329877|DENN/MADD domain containing 4C	NM_184088|Dennd4c|329877|DENN/MADD domain containing 4C	AK154950|Dennd4c|329877|DENN/MADD domain containing 4C
mm9_v1_chr4_-_19497166_19497254	1.38749	RUNX1..3.p2	BC036983|Cpne3|70568|copine III	AK220348|Cpne3|70568|copine III	AK146324|Cpne3|70568|copine III	AK017357|Cpne3|70568|copine III	AK036664|Cpne3|70568|copine III	NM_027769|Cpne3|70568|copine III	AK017651|Cpne3|70568|copine III
mm9_v1_chr13_+_67295437_67295470	1.38699	RUNX1..3.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chr14_-_32249046_32249246	1.38526	RUNX1..3.p2	AB016835|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	BC053741|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	NM_011894|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)
mm9_v1_chr9_-_32151821_32151934	1.38331	RUNX1..3.p2	AK052891|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	AK164058|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	NM_010605|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	AK137600|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5
mm9_v1_chr2_-_4544898_4544915	1.37522	RUNX1..3.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr10_-_79807963_79807985	1.37169	RUNX1..3.p2	AK154947|Adamtsl5|66548|ADAMTS-like 5
mm9_v1_chr5_-_116252183_116252221	1.37149	RUNX1..3.p2	BC002062|Rpl29|19944|ribosomal protein L29	BC019179|Rpl29|19944|ribosomal protein L29	BC082292|Rpl29|19944|ribosomal protein L29	L08651|Rpl29|19944|ribosomal protein L29	BC096575|Rpl29|19944|ribosomal protein L29	BC094039|Rpl29|19944|ribosomal protein L29	AK088551|Rpl29|19944|ribosomal protein L29
mm9_v1_chr19_+_22522646_22522721	1.36945	RUNX1..3.p2	AK044454|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_177341|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141400|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141412|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr8_+_86525604_86525604	1.3647	RUNX1..3.p2	BC147276|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC147277|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172025|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172026|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	NM_183097|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene
mm9_v1_chr4_-_49421014_49421022	1.34911	RUNX1..3.p2	AK050357|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	AK050308|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	NM_145368|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2
mm9_v1_chr1_-_58752798_58752832	1.34796	RUNX1..3.p2	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr5_+_88095232_88095257	1.34791	RUNX1..3.p2	AK052808|Csn1s1|12990|casein alpha s1	AK085690|Csn1s1|12990|casein alpha s1	BC003859|Csn1s1|12990|casein alpha s1	BC006024|Csn1s1|12990|casein alpha s1	BC007192|Csn1s1|12990|casein alpha s1	BC008278|Csn1s1|12990|casein alpha s1	BC040246|Csn1s1|12990|casein alpha s1	NM_007784|Csn1s1|12990|casein alpha s1	BC002101|Csn1s1|12990|casein alpha s1
mm9_v1_chr13_-_43399540_43399575	1.34353	RUNX1..3.p2	AK147458|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1	NM_001033399|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1
mm9_v1_chr16_-_55895391_55895437	1.34188	RUNX1..3.p2	NM_001134457|Fam55c|385658|family with sequence similarity 55, member C	AK157499|Fam55c|385658|family with sequence similarity 55, member C	NM_001134494|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr9_-_42208011_42208011	1.33897	RUNX1..3.p2	NM_009347|Tecta|21683|tectorin alpha	X99805|Tecta|21683|tectorin alpha
mm9_v1_chrX_-_106208659_106208718	1.33572	RUNX1..3.p2	BC021626|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AB018374|Hmgn5|50887|high-mobility group nucleosome binding domain 5	BC083087|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK131996|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK146755|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AF213454|Hmgn5|50887|high-mobility group nucleosome binding domain 5	NM_016710|Hmgn5|50887|high-mobility group nucleosome binding domain 5
mm9_v1_chr10_+_117641997_117642023	1.33264	RUNX1..3.p2	AJ249491|Il22|50929|interleukin 22	BC104348|Il22|50929|interleukin 22	BC104349|Il22|50929|interleukin 22	NM_016971|Il22|50929|interleukin 22	BC116235|Il22|50929|interleukin 22
mm9_v1_chr3_+_102877936_102877949	1.32797	RUNX1..3.p2	NM_001033303|Ampd1|229665|adenosine monophosphate deaminase 1	AK137549|Ampd1|229665|adenosine monophosphate deaminase 1	AK132524|Ampd1|229665|adenosine monophosphate deaminase 1
mm9_v1_chr4_-_14548903_14548926	1.32695	RUNX1..3.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr9_+_108957402_108957503	1.32643	RUNX1..3.p2	AK081060|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK020877|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK018291|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_026381|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC057089|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC017600|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr7_-_27963760_27963951	1.32093	RUNX1..3.p2	AB232592|Rab4b|19342|RAB4B, member RAS oncogene family	AK140513|Rab4b|19342|RAB4B, member RAS oncogene family	BC007147|Rab4b|19342|RAB4B, member RAS oncogene family	AF408432|Rab4b|19342|RAB4B, member RAS oncogene family	BC096654|Rab4b|19342|RAB4B, member RAS oncogene family	AK005314|Rab4b|19342|RAB4B, member RAS oncogene family	NM_029391|Rab4b|19342|RAB4B, member RAS oncogene family	AK170552|Rab4b|19342|RAB4B, member RAS oncogene family
mm9_v1_chr19_+_32560258_32560494	1.32059	RUNX1..3.p2	AF046908|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	NM_010799|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK128911|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK017558|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK042453|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK151486|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK080471|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AB041574|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1
mm9_v1_chr6_+_97160749_97160814	1.32055	RUNX1..3.p2	AF421860|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK077826|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	NM_022992|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK076519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK088205|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF133912|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	BC003897|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK008519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK005259|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF265214|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chrX_+_8640215_8640215	1.31698	RUNX1..3.p2	BC104362|Gm5635|434729|predicted gene 5635	NM_001038697|Gm5635|434729|predicted gene 5635
mm9_v1_chr8_+_9977802_9977903	1.31584	RUNX1..3.p2	AK044407|Abhd13|68904|abhydrolase domain containing 13	BC043690|Abhd13|68904|abhydrolase domain containing 13
mm9_v1_chrX_+_90531783_90531984	1.3123	RUNX1..3.p2	AB006103|Arx|11878|aristaless related homeobox	BC052033|Arx|11878|aristaless related homeobox	NM_007492|Arx|11878|aristaless related homeobox
mm9_v1_chr11_+_87912647_87912677	1.31038	RUNX1..3.p2	NM_198013|Cuedc1|103841|CUE domain containing 1
mm9_v1_chrX_+_160346948_160347157	1.30829	RUNX1..3.p2	AK045558|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK047724|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK167690|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK053941|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK005223|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	BC046964|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	NM_026887|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK043776|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit
mm9_v1_chr13_+_6547412_6547442	1.30233	RUNX1..3.p2	AK147837|Pitrm1|69617|pitrilysin metallepetidase 1	AK129292|Pitrm1|69617|pitrilysin metallepetidase 1	AK164235|Pitrm1|69617|pitrilysin metallepetidase 1
mm9_v1_chr5_-_75440586_75440675	1.30182	RUNX1..3.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr4_+_116381175_116381228	1.30177	RUNX1..3.p2	AK002768|Ccdc163|68394|coiled-coil domain containing 163	AK016995|Ccdc163|68394|coiled-coil domain containing 163
mm9_v1_chr11_+_93905501_93905545	1.29964	RUNX1..3.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr2_+_119034692_119034762	1.29957	RUNX1..3.p2	AK005386|Zfyve19|72008|zinc finger, FYVE domain containing 19	BC018420|Zfyve19|72008|zinc finger, FYVE domain containing 19	BC099429|Zfyve19|72008|zinc finger, FYVE domain containing 19
mm9_v1_chr9_+_110666191_110666214	1.29713	RUNX1..3.p2	AK011518|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr7_-_50915515_50915552	1.29676	RUNX1..3.p2	AY371487|Siglece|83382|sialic acid binding Ig-like lectin E	AY348552|Siglece|83382|sialic acid binding Ig-like lectin E	BC023280|Siglece|83382|sialic acid binding Ig-like lectin E	AF329269|Siglece|83382|sialic acid binding Ig-like lectin E	NM_031181|Siglece|83382|sialic acid binding Ig-like lectin E
mm9_v1_chr1_+_20720985_20720998	1.29257	RUNX1..3.p2	AK040420|Il17a|16171|interleukin 17A	BC119303|Il17a|16171|interleukin 17A	BC119309|Il17a|16171|interleukin 17A	NM_010552|Il17a|16171|interleukin 17A	U43088|Il17a|16171|interleukin 17A
mm9_v1_chr2_+_148498350_148498409	1.28674	RUNX1..3.p2	NM_019761|Nxt1|56488|NTF2-related export protein 1	NM_001110159|Nxt1|56488|NTF2-related export protein 1	AK003254|Nxt1|56488|NTF2-related export protein 1	BC023672|Nxt1|56488|NTF2-related export protein 1	AK168314|Nxt1|56488|NTF2-related export protein 1	AF156958|Nxt1|56488|NTF2-related export protein 1
mm9_v1_chr13_+_78337168_78337277	1.28528	RUNX1..3.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr10_+_128236561_128236694	1.28491	RUNX1..3.p2	AK135651|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr3_+_135102075_135102261	1.28488	RUNX1..3.p2	AK169177|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK165235|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr19_+_8969711_8969726	1.28418	RUNX1..3.p2	AK179191|Ints5|109077|integrator complex subunit 5	AK183632|Ints5|109077|integrator complex subunit 5
mm9_v1_chr11_-_53448203_53448203	1.28073	RUNX1..3.p2	M23504|Il13|16163|interleukin 13	NM_008355|Il13|16163|interleukin 13
mm9_v1_chrX_+_159339512_159339556	1.27994	RUNX1..3.p2	NM_001168569|Ctps2|55936|cytidine 5'-triphosphate synthase 2	NM_001168571|Ctps2|55936|cytidine 5'-triphosphate synthase 2	NM_018737|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK052854|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr8_-_54724277_54724418	1.27901	RUNX1..3.p2	BC024921|Neil3|234258|nei like 3 (E. coli)	AB072931|Neil3|234258|nei like 3 (E. coli)	AK031027|Neil3|234258|nei like 3 (E. coli)	BC034753|Neil3|234258|nei like 3 (E. coli)	NM_146208|Neil3|234258|nei like 3 (E. coli)
mm9_v1_chr1_-_30920095_30920100	1.27758	RUNX1..3.p2	BC011226|Phf3|213109|PHD finger protein 3	BC032205|Phf3|213109|PHD finger protein 3	BC137913|Phf3|213109|PHD finger protein 3	NM_001081080|Phf3|213109|PHD finger protein 3
mm9_v1_chr15_+_44289098_44289098	1.27558	RUNX1..3.p2	AB055648|Pkhd1l1|192190|polycystic kidney and hepatic disease 1-like 1	AY219182|Pkhd1l1|192190|polycystic kidney and hepatic disease 1-like 1	NM_138674|Pkhd1l1|192190|polycystic kidney and hepatic disease 1-like 1
mm9_v1_chr16_-_89508565_89508569	1.27476	RUNX1..3.p2	AK017387|Krtap7-1|71363|keratin associated protein 7-1	NM_027771|Krtap7-1|71363|keratin associated protein 7-1
mm9_v1_chr16_+_4940800_4940851	1.27108	RUNX1..3.p2	
mm9_v1_chr15_-_36538288_36538422	1.27108	RUNX1..3.p2	BC023145|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003870|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr17_-_47639222_47639245	1.26158	RUNX1..3.p2	BC057895|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	BC023756|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AF222802|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK045108|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK049949|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK076486|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK086656|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK161658|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK162110|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	NM_022015|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq
mm9_v1_chr7_-_35841565_35841620	1.26126	RUNX1..3.p2	NM_009884|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	S80556|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr16_+_87553574_87553800	1.25939	RUNX1..3.p2	AY033899|ORF63|224419|open reading frame 63	NM_144854|ORF63|224419|open reading frame 63	AK041664|ORF63|224419|open reading frame 63	BC115624|ORF63|224419|open reading frame 63	BC115625|ORF63|224419|open reading frame 63
mm9_v1_chr5_-_23953594_23953663	1.25686	RUNX1..3.p2	AY603379|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AK008109|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	BC019547|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AB030183|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	NM_022418|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1
mm9_v1_chr11_+_14499242_14499278	1.25368	RUNX1..3.p2	NM_001164166|Pom121l12|432536|POM121 membrane glycoprotein-like 12	AK160151|Pom121l12|432536|POM121 membrane glycoprotein-like 12
mm9_v1_chr15_+_84511408_84511471	1.25209	RUNX1..3.p2	NM_146061|Prr5|109270|proline rich 5 (renal)	AF482997|Prr5|109270|proline rich 5 (renal)	AK081231|Prr5|109270|proline rich 5 (renal)
mm9_v1_chr15_+_66502314_66502353	1.25089	RUNX1..3.p2	U76389|Tg|21819|thyroglobulin	NM_009375|Tg|21819|thyroglobulin	BC111467|Tg|21819|thyroglobulin	AF076186|Tg|21819|thyroglobulin	AF076187|Tg|21819|thyroglobulin
mm9_v1_chr11_-_94834751_94834776	1.24956	RUNX1..3.p2	AF019564|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	BC060287|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK009015|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK075915|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	NM_001136080|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)
mm9_v1_chr2_-_160192500_160192580	1.24795	RUNX1..3.p2	BC016434|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	L36435|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm9_v1_chr13_-_38694739_38694840	1.24651	RUNX1..3.p2	
mm9_v1_chr15_-_78299035_78299081	1.24597	RUNX1..3.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr7_-_110809831_110809831	1.2454	RUNX1..3.p2	BC119275|Olfr623|259126|olfactory receptor 623	NM_147122|Olfr623|259126|olfactory receptor 623
mm9_v1_chr3_+_51299646_51299685	1.24308	RUNX1..3.p2	
mm9_v1_chr4_-_94595442_94595518	1.23492	RUNX1..3.p2	AB438105|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AB438106|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK006446|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	DQ336137|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016313|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	BC089517|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	NM_027089|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016738|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828781|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828782|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene
mm9_v1_chr4_-_124359695_124359773	1.23458	RUNX1..3.p2	AK008801|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr10_-_80555389_80555406	1.23438	RUNX1..3.p2	BC010786|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr15_+_6336747_6336872	1.23359	RUNX1..3.p2	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr11_-_100749131_100749140	1.23198	RUNX1..3.p2	AK004083|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr8_+_74432504_74432561	1.23072	RUNX1..3.p2	NM_001166645|Zfp882|382019|zinc finger protein 882	AK040385|Zfp882|382019|zinc finger protein 882	BC080687|Zfp882|382019|zinc finger protein 882
mm9_v1_chr5_-_115584921_115584983	1.22633	RUNX1..3.p2	AK045128|Unc119b|106840|unc-119 homolog B (C. elegans)	BC115529|Unc119b|106840|unc-119 homolog B (C. elegans)	BC112388|Unc119b|106840|unc-119 homolog B (C. elegans)	AK082614|Unc119b|106840|unc-119 homolog B (C. elegans)	NM_175352|Unc119b|106840|unc-119 homolog B (C. elegans)
mm9_v1_chr11_+_104953532_104953539	1.22575	RUNX1..3.p2	NM_001081046|Efcab3|70894|EF-hand calcium binding domain 3	BC050801|Efcab3|70894|EF-hand calcium binding domain 3	AK014861|Efcab3|70894|EF-hand calcium binding domain 3
mm9_v1_chr4_+_141349526_141349778	1.22489	RUNX1..3.p2	BC056447|Casp9|12371|caspase 9	NM_015733|Casp9|12371|caspase 9	AK156500|Casp9|12371|caspase 9	AK085095|Casp9|12371|caspase 9	BC056372|Casp9|12371|caspase 9	AK162863|Casp9|12371|caspase 9	AK085561|Casp9|12371|caspase 9	AK154495|Casp9|12371|caspase 9	AB019600|Casp9|12371|caspase 9	AB019601|Casp9|12371|caspase 9	CT010400|Casp9|12371|caspase 9	AK085152|Casp9|12371|caspase 9
mm9_v1_chr6_+_30026320_30026320	1.22263	RUNX1..3.p2	AK135673|Nrf1|18181|nuclear respiratory factor 1	NM_001164229|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr7_+_96552871_96552906	1.21963	RUNX1..3.p2	BC015256|Fzd4|14366|frizzled homolog 4 (Drosophila)	NM_008055|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK044794|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK132577|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK050891|Fzd4|14366|frizzled homolog 4 (Drosophila)
mm9_v1_chr3_+_54943959_54943976	1.21513	RUNX1..3.p2	AK076919|A730037C10Rik|320604|RIKEN cDNA A730037C10 gene	NM_177203|A730037C10Rik|320604|RIKEN cDNA A730037C10 gene	AK160422|A730037C10Rik|320604|RIKEN cDNA A730037C10 gene	BC089522|A730037C10Rik|320604|RIKEN cDNA A730037C10 gene
mm9_v1_chr3_+_52153283_52153283	1.2122	RUNX1..3.p2	AK054289|Foxo1|56458|forkhead box O1
mm9_v1_chr10_+_126603057_126603111	1.20827	RUNX1..3.p2	U18975|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr3_+_122970332_122970438	1.20814	RUNX1..3.p2	BC087865|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	BC067020|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	NM_027135|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr18_-_24280308_24280378	1.20659	RUNX1..3.p2	BC056426|Ino80c|225280|INO80 complex subunit C	AK083718|Ino80c|225280|INO80 complex subunit C	NM_172625|Ino80c|225280|INO80 complex subunit C	AK077290|Ino80c|225280|INO80 complex subunit C	BC060961|Ino80c|225280|INO80 complex subunit C
mm9_v1_chr3_+_90318850_90318869	1.20225	RUNX1..3.p2	AK002755|S100a13|20196|S100 calcium binding protein A13	AK008895|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr11_-_99911864_99911864	1.19948	RUNX1..3.p2	M27734|Krt31|16660|keratin 31	NM_010659|Krt31|16660|keratin 31
mm9_v1_chr7_+_50817739_50817739	1.19651	RUNX1..3.p2	AK155078|Zfp658|210104|zinc finger protein 658	NM_001008549|Zfp658|210104|zinc finger protein 658
mm9_v1_chr7_-_15208414_15208414	1.19642	RUNX1..3.p2	AK140342|Vmn1r90|627280|vomeronasal 1 receptor 90	NM_001039146|Vmn1r90|627280|vomeronasal 1 receptor 90
mm9_v1_chr9_-_14588941_14589004	1.19391	RUNX1..3.p2	AK155932|Ankrd49|56503|ankyrin repeat domain 49	AK137504|Ankrd49|56503|ankyrin repeat domain 49	AK153923|Ankrd49|56503|ankyrin repeat domain 49	AK157315|Ankrd49|56503|ankyrin repeat domain 49	AK132850|Ankrd49|56503|ankyrin repeat domain 49	AF028722|Ankrd49|56503|ankyrin repeat domain 49
mm9_v1_chr16_+_22951144_22951164	1.1911	RUNX1..3.p2	NM_053176|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr4_+_137150067_137150162	1.1885	RUNX1..3.p2	AK166158|Usp48|170707|ubiquitin specific peptidase 48	NM_130879|Usp48|170707|ubiquitin specific peptidase 48	AK220190|Usp48|170707|ubiquitin specific peptidase 48	BC021769|Usp48|170707|ubiquitin specific peptidase 48	AK052297|Usp48|170707|ubiquitin specific peptidase 48
mm9_v1_chr3_+_61168428_61168660	1.1874	RUNX1..3.p2	NM_028712|Rap2b|74012|RAP2B, member of RAS oncogene family	AK045030|Rap2b|74012|RAP2B, member of RAS oncogene family	AK014462|Rap2b|74012|RAP2B, member of RAS oncogene family	AK042941|Rap2b|74012|RAP2B, member of RAS oncogene family	AK163186|Rap2b|74012|RAP2B, member of RAS oncogene family	AK150187|Rap2b|74012|RAP2B, member of RAS oncogene family	BC046528|Rap2b|74012|RAP2B, member of RAS oncogene family
mm9_v1_chr4_+_130500298_130500338	1.18227	RUNX1..3.p2	AK014342|Matn1|17180|matrilin 1, cartilage matrix protein	NM_010769|Matn1|17180|matrilin 1, cartilage matrix protein	BC047140|Matn1|17180|matrilin 1, cartilage matrix protein	U35035|Matn1|17180|matrilin 1, cartilage matrix protein
mm9_v1_chr4_+_105988790_105988840	1.1771	RUNX1..3.p2	NM_183225|Usp24|329908|ubiquitin specific peptidase 24	AK045043|Usp24|329908|ubiquitin specific peptidase 24
mm9_v1_chr5_-_136048841_136048918	1.17557	RUNX1..3.p2	AF244367|Ccl24|56221|chemokine (C-C motif) ligand 24	AK009718|Ccl24|56221|chemokine (C-C motif) ligand 24	AF281075|Ccl24|56221|chemokine (C-C motif) ligand 24	AK157068|Ccl24|56221|chemokine (C-C motif) ligand 24	NM_019577|Ccl24|56221|chemokine (C-C motif) ligand 24	BC065389|Ccl24|56221|chemokine (C-C motif) ligand 24
mm9_v1_chr12_-_85183292_85183292	1.16328	RUNX1..3.p2	AF169191|Numb|18222|numb gene homolog (Drosophila)	AF169192|Numb|18222|numb gene homolog (Drosophila)	AF170709|Numb|18222|numb gene homolog (Drosophila)	NM_001136075|Numb|18222|numb gene homolog (Drosophila)	NM_010949|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr2_+_24132473_24132473	1.16222	RUNX1..3.p2	AK014576|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_001146087|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_001146088|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr7_+_30768973_30768975	1.16156	RUNX1..3.p2	AK148548|Zfp568|243905|zinc finger protein 568	AK166471|Zfp568|243905|zinc finger protein 568	NM_001033355|Zfp568|243905|zinc finger protein 568	NM_001167872|Zfp568|243905|zinc finger protein 568	NM_001167873|Zfp568|243905|zinc finger protein 568	AK143471|Zfp568|243905|zinc finger protein 568
mm9_v1_chr5_-_114292851_114293254	1.16126	RUNX1..3.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr9_-_43013831_43013943	1.16086	RUNX1..3.p2	Z18537|Pou2f3|18988|POU domain, class 2, transcription factor 3	L14677|Pou2f3|18988|POU domain, class 2, transcription factor 3	NM_011139|Pou2f3|18988|POU domain, class 2, transcription factor 3
mm9_v1_chr9_+_50924105_50924222	1.15923	RUNX1..3.p2	AB050983|Btg4|56057|B-cell translocation gene 4	AK136149|Btg4|56057|B-cell translocation gene 4	AK136185|Btg4|56057|B-cell translocation gene 4	NM_019493|Btg4|56057|B-cell translocation gene 4	AK136041|Btg4|56057|B-cell translocation gene 4	AK136124|Btg4|56057|B-cell translocation gene 4	AK162122|Btg4|56057|B-cell translocation gene 4	AK163407|Btg4|56057|B-cell translocation gene 4	BC066811|Btg4|56057|B-cell translocation gene 4	AJ005120|Btg4|56057|B-cell translocation gene 4
mm9_v1_chr8_-_72974533_72974552	1.1579	RUNX1..3.p2	AK188349|Klhl26|234378|kelch-like 26 (Drosophila)
mm9_v1_chrX_+_8610611_8610618	1.15698	RUNX1..3.p2	NM_031261|Fthl17|83457|ferritin, heavy polypeptide-like 17	AF285569|Fthl17|83457|ferritin, heavy polypeptide-like 17
mm9_v1_chr4_-_117564594_117564651	1.15655	RUNX1..3.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chrX_-_48371127_48371236	1.15039	RUNX1..3.p2	AK087971|Rap2c|72065|RAP2C, member of RAS oncogene family	BC050056|Rap2c|72065|RAP2C, member of RAS oncogene family	BC027363|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146057|Rap2c|72065|RAP2C, member of RAS oncogene family	BC064814|Rap2c|72065|RAP2C, member of RAS oncogene family	BC094890|Rap2c|72065|RAP2C, member of RAS oncogene family	NM_172413|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146956|Rap2c|72065|RAP2C, member of RAS oncogene family	AK147015|Rap2c|72065|RAP2C, member of RAS oncogene family
mm9_v1_chr19_-_5845001_5845012	1.14914	RUNX1..3.p2	BC025215|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr12_-_74147698_74147707	1.13795	RUNX1..3.p2	AK131925|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	NM_009189|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK144753|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr4_+_43867163_43867163	1.13767	RUNX1..3.p2	BC130252|Olfr155|29845|olfactory receptor 155	NM_019473|Olfr155|29845|olfactory receptor 155
mm9_v1_chr10_+_80643547_80643880	1.13638	RUNX1..3.p2	BC002233|Eef2|13629|eukaryotic translation elongation factor 2	M76131|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr11_+_85413817_85413884	1.13502	RUNX1..3.p2	AK078571|7030407E18Rik|399600|RIKEN cDNA 7030407E18 gene
mm9_v1_chr9_-_109242147_109242172	1.13035	RUNX1..3.p2	AF176528|Fbxw14|50757|F-box and WD-40 domain protein 14	BC084592|Fbxw28|668758|F-box and WD-40 domain protein 28	AK143322|Fbxw28|668758|F-box and WD-40 domain protein 28	AK162190|Fbxw28|668758|F-box and WD-40 domain protein 28	NM_001177419|Fbxw28|668758|F-box and WD-40 domain protein 28	NM_001177420|Fbxw28|668758|F-box and WD-40 domain protein 28
mm9_v1_chr2_-_157972041_157972154	1.12984	RUNX1..3.p2	AF076928|Tgm2|21817|transglutaminase 2, C polypeptide	M55154|Tgm2|21817|transglutaminase 2, C polypeptide	BC016492|Tgm2|21817|transglutaminase 2, C polypeptide	AF114266|Tgm2|21817|transglutaminase 2, C polypeptide	AK052912|Tgm2|21817|transglutaminase 2, C polypeptide	AK054108|Tgm2|21817|transglutaminase 2, C polypeptide	AK080593|Tgm2|21817|transglutaminase 2, C polypeptide	AK086001|Tgm2|21817|transglutaminase 2, C polypeptide	AK152152|Tgm2|21817|transglutaminase 2, C polypeptide	AK159255|Tgm2|21817|transglutaminase 2, C polypeptide	AK166302|Tgm2|21817|transglutaminase 2, C polypeptide	AK168990|Tgm2|21817|transglutaminase 2, C polypeptide	AK089481|Tgm2|21817|transglutaminase 2, C polypeptide	AK080224|Tgm2|21817|transglutaminase 2, C polypeptide	AK151776|Tgm2|21817|transglutaminase 2, C polypeptide	AK152627|Tgm2|21817|transglutaminase 2, C polypeptide	NM_009373|Tgm2|21817|transglutaminase 2, C polypeptide	AK169356|Tgm2|21817|transglutaminase 2, C polypeptide
mm9_v1_chr10_+_127176590_127176697	1.12897	RUNX1..3.p2	BC058661|Zbtb39|320080|zinc finger and BTB domain containing 39	NM_198035|Zbtb39|320080|zinc finger and BTB domain containing 39	AK135409|Zbtb39|320080|zinc finger and BTB domain containing 39	AK155700|Zbtb39|320080|zinc finger and BTB domain containing 39	BC079569|Zbtb39|320080|zinc finger and BTB domain containing 39
mm9_v1_chr12_+_106923552_106923650	1.12112	RUNX1..3.p2	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr8_+_96910392_96910428	1.11904	RUNX1..3.p2	AK081688|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK159500|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK165832|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034991|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_022331|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK172874|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC013523|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm9_v1_chr2_-_27940370_27940408	1.11752	RUNX1..3.p2	AF063217|Fcnb|14134|ficolin B	BC107220|Fcnb|14134|ficolin B	BC107221|Fcnb|14134|ficolin B	NM_010190|Fcnb|14134|ficolin B	AK151676|Fcnb|14134|ficolin B
mm9_v1_chr7_+_148645664_148645872	1.11442	RUNX1..3.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr10_+_19928244_19928244	1.11247	RUNX1..3.p2	NM_001101561|Gm6251|621697|predicted gene 6251
mm9_v1_chr4_+_154843223_154843242	1.11105	RUNX1..3.p2	BC144992|Tmem52|69671|transmembrane protein 52	NM_027161|Tmem52|69671|transmembrane protein 52	BC150685|Tmem52|69671|transmembrane protein 52	AK009779|Tmem52|69671|transmembrane protein 52
mm9_v1_chr15_-_78298904_78298909	1.11093	RUNX1..3.p2	AK004939|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr13_-_12554004_12554004	1.10979	RUNX1..3.p2	NM_001199043|Lgals8|56048|lectin, galactose binding, soluble 8	NM_018886|Lgals8|56048|lectin, galactose binding, soluble 8
mm9_v1_chr17_-_56419388_56419395	1.09896	RUNX1..3.p2	AK003971|Plin3|66905|perilipin 3
mm9_v1_chr2_-_37558794_37558806	1.0985	RUNX1..3.p2	BC014710|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr6_-_51416921_51416984	1.09758	RUNX1..3.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr9_-_96978102_96978110	1.09731	RUNX1..3.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr2_+_118938549_118938606	1.09541	RUNX1..3.p2	AK045050|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK011242|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK148165|Rad51|19361|RAD51 homolog (S. cerevisiae)	NM_011234|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK160282|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK151157|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK151177|Rad51|19361|RAD51 homolog (S. cerevisiae)	BC027384|Rad51|19361|RAD51 homolog (S. cerevisiae)	D13803|Rad51|19361|RAD51 homolog (S. cerevisiae)	D13473|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK076468|Rad51|19361|RAD51 homolog (S. cerevisiae)
mm9_v1_chr14_-_69200119_69200151	1.09508	RUNX1..3.p2	BC046324|Adamdec1|58860|ADAM-like, decysin 1	AJ242912|Adamdec1|58860|ADAM-like, decysin 1	NM_021475|Adamdec1|58860|ADAM-like, decysin 1	AK156586|Adamdec1|58860|ADAM-like, decysin 1	BC026542|Adamdec1|58860|ADAM-like, decysin 1
mm9_v1_chr9_-_109190173_109190189	1.09417	RUNX1..3.p2	BC099372|Fbxw14|50757|F-box and WD-40 domain protein 14	BC145098|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135771|Fbxw14|50757|F-box and WD-40 domain protein 14	BC138018|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135682|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166611|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166612|Fbxw14|50757|F-box and WD-40 domain protein 14	AK087709|Fbxw14|50757|F-box and WD-40 domain protein 14	NM_015793|Fbxw14|50757|F-box and WD-40 domain protein 14
mm9_v1_chr2_-_132078946_132078953	1.09083	RUNX1..3.p2	AK151411|Pcna|18538|proliferating cell nuclear antigen
mm9_v1_chr17_-_56018194_56018217	1.08744	RUNX1..3.p2	BC118950|Zfp119a|104349|zinc finger protein 119a	NM_144546|Zfp119a|104349|zinc finger protein 119a	AF242376|Zfp119a|104349|zinc finger protein 119a
mm9_v1_chr7_+_28964486_28964515	1.085	RUNX1..3.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr13_+_56711111_56711127	1.08409	RUNX1..3.p2	AK171557|Tgfbi|21810|transforming growth factor, beta induced
mm9_v1_chr12_+_120084801_120084801	1.08152	RUNX1..3.p2	AK053093|Sp8|320145|trans-acting transcription factor 8	NM_177082|Sp8|320145|trans-acting transcription factor 8
mm9_v1_chr2_+_158492854_158492905	1.07955	RUNX1..3.p2	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr17_-_23810808_23810848	1.07909	RUNX1..3.p2	AK089746|Thoc6|386612|THO complex 6 homolog (Drosophila)	BC089551|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr14_-_73109254_73109390	1.07881	RUNX1..3.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr8_+_108939247_108939300	1.0759	RUNX1..3.p2	BC046230|Zfp90|22751|zinc finger protein 90	AK147423|Zfp90|22751|zinc finger protein 90	BC046298|Zfp90|22751|zinc finger protein 90	AK050519|Zfp90|22751|zinc finger protein 90	X79828|Zfp90|22751|zinc finger protein 90
mm9_v1_chr2_-_132078887_132078932	1.07565	RUNX1..3.p2	BC010343|Pcna|18538|proliferating cell nuclear antigen	BC005778|Pcna|18538|proliferating cell nuclear antigen	AK012614|Pcna|18538|proliferating cell nuclear antigen	AK012730|Pcna|18538|proliferating cell nuclear antigen	AK012932|Pcna|18538|proliferating cell nuclear antigen	AK088256|Pcna|18538|proliferating cell nuclear antigen	AK151238|Pcna|18538|proliferating cell nuclear antigen	AK165217|Pcna|18538|proliferating cell nuclear antigen	AK168233|Pcna|18538|proliferating cell nuclear antigen	NM_011045|Pcna|18538|proliferating cell nuclear antigen	X53068|Pcna|18538|proliferating cell nuclear antigen	AK168596|Pcna|18538|proliferating cell nuclear antigen
mm9_v1_chr11_-_70468061_70468117	1.07512	RUNX1..3.p2	AK028117|Pfn1|18643|profilin 1	AK150780|Pfn1|18643|profilin 1	BC002080|Pfn1|18643|profilin 1
mm9_v1_chr12_+_107248419_107248492	1.06993	RUNX1..3.p2	BC016676|Vrk1|22367|vaccinia related kinase 1	NM_001029843|Vrk1|22367|vaccinia related kinase 1	NM_001029844|Vrk1|22367|vaccinia related kinase 1	NM_011705|Vrk1|22367|vaccinia related kinase 1	BC051072|Vrk1|22367|vaccinia related kinase 1
mm9_v1_chr2_-_126501326_126501329	1.06878	RUNX1..3.p2	AK040722|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr13_+_56710896_56710979	1.06678	RUNX1..3.p2	AK135536|Tgfbi|21810|transforming growth factor, beta induced	AK142323|Tgfbi|21810|transforming growth factor, beta induced	AK169912|Tgfbi|21810|transforming growth factor, beta induced	AK150969|Tgfbi|21810|transforming growth factor, beta induced	AK152365|Tgfbi|21810|transforming growth factor, beta induced	AK084431|Tgfbi|21810|transforming growth factor, beta induced	AK150449|Tgfbi|21810|transforming growth factor, beta induced	AK150833|Tgfbi|21810|transforming growth factor, beta induced	AK152662|Tgfbi|21810|transforming growth factor, beta induced	AK164373|Tgfbi|21810|transforming growth factor, beta induced	AK151680|Tgfbi|21810|transforming growth factor, beta induced	AK155828|Tgfbi|21810|transforming growth factor, beta induced	AK159711|Tgfbi|21810|transforming growth factor, beta induced	AK170495|Tgfbi|21810|transforming growth factor, beta induced	AK155572|Tgfbi|21810|transforming growth factor, beta induced	NM_009369|Tgfbi|21810|transforming growth factor, beta induced	L19932|Tgfbi|21810|transforming growth factor, beta induced	BC129900|Tgfbi|21810|transforming growth factor, beta induced	BC129901|Tgfbi|21810|transforming growth factor, beta induced
mm9_v1_chr1_+_34592492_34592534	1.06672	RUNX1..3.p2	NM_007685|Cfc1|12627|cripto, FRL-1, cryptic family 1	U57720|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100705|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100706|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100708|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100711|Cfc1|12627|cripto, FRL-1, cryptic family 1
mm9_v1_chr2_+_27370649_27370751	1.06609	RUNX1..3.p2	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr6_+_47827641_47827690	1.06522	RUNX1..3.p2	AK030516|Zfp282|101095|zinc finger protein 282	AK081854|Zfp282|101095|zinc finger protein 282	BC025581|Zfp282|101095|zinc finger protein 282
mm9_v1_chr8_+_93352767_93352776	1.06324	RUNX1..3.p2	AK020244|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr9_-_109987245_109987321	1.05541	RUNX1..3.p2	AK202261|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr13_+_23666249_23666339	1.05516	RUNX1..3.p2	BC119295|Hist1h2ad|319165|histone cluster 1, H2ad	BC119297|Hist1h2ad|319165|histone cluster 1, H2ad	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	NM_178188|Hist1h2ad|319165|histone cluster 1, H2ad
mm9_v1_chr5_+_32535080_32535120	1.05432	RUNX1..3.p2	AK030142|Plb1|665270|phospholipase B1	NM_030072|Plb1|665270|phospholipase B1	AK015301|Plb1|665270|phospholipase B1	AK019494|Plb1|665270|phospholipase B1	AK015993|Plb1|665270|phospholipase B1
mm9_v1_chr4_+_115845976_115845999	1.05131	RUNX1..3.p2	AK006685|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	NM_001099295|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	AK018884|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene
mm9_v1_chr1_-_177909236_177909246	1.04601	RUNX1..3.p2	BC132651|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	BC132653|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	AK139805|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	NM_001039518|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene
mm9_v1_chr6_+_119429620_119429803	1.04122	RUNX1..3.p2	NM_133940|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK036124|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK084506|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK155154|Fbxl14|101358|F-box and leucine-rich repeat protein 14	BC021329|Fbxl14|101358|F-box and leucine-rich repeat protein 14
mm9_v1_chr9_-_40153864_40153891	1.04079	RUNX1..3.p2	BC070451|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr3_+_30501008_30501008	1.04075	RUNX1..3.p2	BC065084|Mynn|80732|myoneurin	NM_030557|Mynn|80732|myoneurin
mm9_v1_chr1_-_136443526_136443598	1.03574	RUNX1..3.p2	BC145149|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene	BC145786|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene	NM_001145300|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene
mm9_v1_chr1_+_174886898_174886898	1.03525	RUNX1..3.p2	BC119298|Olfr16|18313|olfactory receptor 16	BC119300|Olfr16|18313|olfactory receptor 16	NM_008763|Olfr16|18313|olfactory receptor 16
mm9_v1_chr11_+_59263522_59263622	1.03244	RUNX1..3.p2	AK047586|Jmjd4|194952|jumonji domain containing 4	AK037954|Jmjd4|194952|jumonji domain containing 4	BC049148|Jmjd4|194952|jumonji domain containing 4	AK052144|Jmjd4|194952|jumonji domain containing 4	AK032477|Jmjd4|194952|jumonji domain containing 4	AK145394|Jmjd4|194952|jumonji domain containing 4	AK079104|Jmjd4|194952|jumonji domain containing 4	AK084669|Jmjd4|194952|jumonji domain containing 4	NM_178659|Jmjd4|194952|jumonji domain containing 4	AK171919|Jmjd4|194952|jumonji domain containing 4	BC116707|Jmjd4|194952|jumonji domain containing 4	BC118020|Jmjd4|194952|jumonji domain containing 4	BC098198|Jmjd4|194952|jumonji domain containing 4
mm9_v1_chr11_-_3813644_3813898	1.03221	RUNX1..3.p2	BC020181|Slc35e4|103710|solute carrier family 35, member E4	BC095957|Slc35e4|103710|solute carrier family 35, member E4
mm9_v1_chr10_-_75297615_75297625	1.03153	RUNX1..3.p2	AK158939|Gstt2|14872|glutathione S-transferase, theta 2	NM_010361|Gstt2|14872|glutathione S-transferase, theta 2
mm9_v1_chr4_-_141161882_141162024	1.02966	RUNX1..3.p2	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr14_-_73768214_73768311	1.02785	RUNX1..3.p2	AK198503|Itm2b|16432|integral membrane protein 2B	AK197360|Itm2b|16432|integral membrane protein 2B	AB030204|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr10_+_76025016_76025053	1.02587	RUNX1..3.p2	AK006410|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene	NM_029661|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene	BC049686|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene	BC147585|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene	BC147614|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene	AK006232|1700027D21Rik|76573|RIKEN cDNA 1700027D21 gene
mm9_v1_chr15_-_76038682_76038682	1.0253	RUNX1..3.p2	AF188023|Plec|18810|plectin	AY480037|Plec|18810|plectin	NM_001164203|Plec|18810|plectin	NM_201388|Plec|18810|plectin
mm9_v1_chr5_+_43906796_43906826	1.02283	RUNX1..3.p2	AK017441|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_001135172|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	BC090967|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr6_-_146583036_146583144	1.0217	RUNX1..3.p2	BC023389|Tm7sf3|67623|transmembrane 7 superfamily member 3	DQ104329|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK171111|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK154633|Tm7sf3|67623|transmembrane 7 superfamily member 3	NM_026281|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr17_-_34976745_34976778	1.02087	RUNX1..3.p2	AK181557|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr8_+_108703001_108703015	1.02035	RUNX1..3.p2	BC038404|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr11_-_120422109_120422348	1.01473	RUNX1..3.p2	AK199305|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK207358|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK215989|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK192153|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198572|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK194021|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK197388|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198858|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK199711|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK200927|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr15_-_98025972_98025972	1.01137	RUNX1..3.p2	NM_001011733|Olfr288|545140|olfactory receptor 288
mm9_v1_chr1_+_83113340_83113380	1.00712	RUNX1..3.p2	AK079862|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_001159738|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_016960|Ccl20|20297|chemokine (C-C motif) ligand 20	AB015136|Ccl20|20297|chemokine (C-C motif) ligand 20	AF053313|Ccl20|20297|chemokine (C-C motif) ligand 20	AF099052|Ccl20|20297|chemokine (C-C motif) ligand 20	BC028504|Ccl20|20297|chemokine (C-C motif) ligand 20	AJ222694|Ccl20|20297|chemokine (C-C motif) ligand 20
mm9_v1_chr8_+_35178083_35178147	1.00197	RUNX1..3.p2	EU721729|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	NM_001126314|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147844|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147849|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	EU518496|Mboat4|234155|membrane bound O-acyltransferase domain containing 4
mm9_v1_chr3_+_127256406_127256550	1.0019	RUNX1..3.p2	BC079891|4930422G04Rik|71643|RIKEN cDNA 4930422G04 gene	NM_197997|4930422G04Rik|71643|RIKEN cDNA 4930422G04 gene	BC082599|4930422G04Rik|71643|RIKEN cDNA 4930422G04 gene	BC085187|4930422G04Rik|71643|RIKEN cDNA 4930422G04 gene
mm9_v1_chr9_-_22064292_22064338	1.00071	RUNX1..3.p2	AK032725|Zfp599|235048|zinc finger protein 599	BC050092|Zfp599|235048|zinc finger protein 599	NM_181419|Zfp599|235048|zinc finger protein 599
mm9_v1_chr6_+_119186543_119186612	0.996116	RUNX1..3.p2	NM_001033382|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4	AK044427|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4	BC141091|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm9_v1_chr10_+_19076344_19076344	0.992871	RUNX1..3.p2	NM_053008|Olig3|94222|oligodendrocyte transcription factor 3
mm9_v1_chr10_-_51915049_51915049	0.992803	RUNX1..3.p2	NM_011282|Ros1|19886|Ros1 proto-oncogene	U15443|Ros1|19886|Ros1 proto-oncogene
mm9_v1_chrX_+_57252630_57252647	0.988065	RUNX1..3.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr15_-_101723333_101723350	0.985229	RUNX1..3.p2	AK009075|Krt76|77055|keratin 76	AK036802|Krt76|77055|keratin 76	AK137676|Krt76|77055|keratin 76	NM_001033177|Krt76|77055|keratin 76
mm9_v1_chr19_+_56623108_56623165	0.985012	RUNX1..3.p2	AK004564|Nhlrc2|66866|NHL repeat containing 2	AK002650|Nhlrc2|66866|NHL repeat containing 2
mm9_v1_chr4_-_116794923_116794989	0.979023	RUNX1..3.p2	AK141215|Btbd19|78611|BTB (POZ) domain containing 19
mm9_v1_chr18_-_78375872_78375910	0.977793	RUNX1..3.p2	AF367359|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_001110273|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr10_+_81510867_81510887	0.976827	RUNX1..3.p2	AK143655|Zfp873|408062|zinc finger protein 873	NM_001024626|Zfp873|408062|zinc finger protein 873	BC090848|Zfp873|408062|zinc finger protein 873
mm9_v1_chr10_-_67011689_67011747	0.975829	RUNX1..3.p2	BC057106|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	BC058407|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	AK155334|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	NM_001005419|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase
mm9_v1_chr11_+_100939724_100939776	0.973074	RUNX1..3.p2	NM_010475|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	X89627|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	BC125657|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	BC125659|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	AK143346|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1
mm9_v1_chr3_+_135101664_135101764	0.972222	RUNX1..3.p2	AK153111|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152231|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153410|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167801|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK151594|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK032885|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167077|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK090099|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC098220|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC024351|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK004001|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK049906|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_025356|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167650|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159546|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152541|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159963|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC057941|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK088448|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr9_+_37296867_37296905	0.972078	RUNX1..3.p2	BC066002|BC024479|235184|cDNA sequence BC024479	NM_146222|BC024479|235184|cDNA sequence BC024479
mm9_v1_chr4_-_147242501_147242654	0.971285	RUNX1..3.p2	BC017525|Miip|28010|migration and invasion inhibitory protein	AK133976|Miip|28010|migration and invasion inhibitory protein	AK170224|Miip|28010|migration and invasion inhibitory protein	BC024069|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr9_-_45762994_45763069	0.968966	RUNX1..3.p2	BC051101|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr11_+_67779939_67779975	0.968647	RUNX1..3.p2	AK003297|Stx8|55943|syntaxin 8	BC048479|Stx8|55943|syntaxin 8	BC061118|Stx8|55943|syntaxin 8	AK016271|Stx8|55943|syntaxin 8	AK011376|Stx8|55943|syntaxin 8
mm9_v1_chr1_+_93041665_93041717	0.968173	RUNX1..3.p2	AK133355|Rbm44|329207|RNA binding motif protein 44	NM_001033408|Rbm44|329207|RNA binding motif protein 44	BC150950|Rbm44|329207|RNA binding motif protein 44
mm9_v1_chr8_+_48072271_48072307	0.967726	RUNX1..3.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr16_+_96422319_96422322	0.96576	RUNX1..3.p2	AK017399|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr10_+_20067606_20067641	0.965024	RUNX1..3.p2	NM_027930|Fam54a|71804|family with sequence similarity 54, member A	BC019132|Fam54a|71804|family with sequence similarity 54, member A	AK011410|Fam54a|71804|family with sequence similarity 54, member A
mm9_v1_chr12_-_104895307_104895340	0.956331	RUNX1..3.p2	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr3_+_53959956_53960294	0.955043	RUNX1..3.p2	AK084109|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK080670|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK084139|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	NM_016984|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50921|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50922|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC120729|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC131915|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK044265|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF190646|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF011543|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF019663|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK049788|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4
mm9_v1_chr12_+_84973146_84973375	0.952554	RUNX1..3.p2	NM_027349|Rbm25|67039|RNA binding motif protein 25	AK011403|Rbm25|67039|RNA binding motif protein 25	AK164367|Rbm25|67039|RNA binding motif protein 25	AK151910|Rbm25|67039|RNA binding motif protein 25	AK144341|AA645497|100499479|expressed sequence AA645497
mm9_v1_chr7_+_109850836_109850868	0.951542	RUNX1..3.p2	AK141545|Olfr558|259097|olfactory receptor 558	NM_147093|Olfr558|259097|olfactory receptor 558
mm9_v1_chr2_+_91493364_91493364	0.951102	RUNX1..3.p2	AK084622|Arhgap1|228359|Rho GTPase activating protein 1	NM_146124|Arhgap1|228359|Rho GTPase activating protein 1
mm9_v1_chr2_-_18314344_18314371	0.944792	RUNX1..3.p2	BC020071|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1
mm9_v1_chr7_-_14840218_14840218	0.943308	RUNX1..3.p2	BC147210|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	BC172008|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	NM_001081325|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm9_v1_chrX_-_39265047_39265129	0.943225	RUNX1..3.p2	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr4_-_94269802_94269843	0.941383	RUNX1..3.p2	AK081641|Plaa|18786|phospholipase A2, activating protein	AK162534|Plaa|18786|phospholipase A2, activating protein	AK166122|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr17_-_44872610_44872658	0.94107	RUNX1..3.p2	AK089291|Runx2|12393|runt related transcription factor 2
mm9_v1_chr16_-_4213389_4213406	0.940449	RUNX1..3.p2	BC072594|Crebbp|12914|CREB binding protein	NM_001025432|Crebbp|12914|CREB binding protein	BC010297|Crebbp|12914|CREB binding protein
mm9_v1_chr5_+_114581164_114581232	0.938464	RUNX1..3.p2	NM_011677|Ung|22256|uracil DNA glycosylase	X99018|Ung|22256|uracil DNA glycosylase	U55041|Ung|22256|uracil DNA glycosylase	AK168709|Ung|22256|uracil DNA glycosylase	AK168785|Ung|22256|uracil DNA glycosylase	BC052853|Ung|22256|uracil DNA glycosylase
mm9_v1_chr19_-_8293322_8293389	0.937852	RUNX1..3.p2	AF536196|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AK052597|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	BC126952|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	NM_172776|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AF536195|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene
mm9_v1_chr7_+_50890076_50890108	0.930259	RUNX1..3.p2	AK008389|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18	BC042780|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18	NM_028236|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18
mm9_v1_chr2_+_22149129_22149131	0.926245	RUNX1..3.p2	NM_148413|Myo3a|667663|myosin IIIA	AK018511|Myo3a|667663|myosin IIIA
mm9_v1_chr11_+_85646309_85646316	0.926152	RUNX1..3.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chrX_-_70680646_70680684	0.925701	RUNX1..3.p2	BC104384|Trex2|24102|three prime repair exonuclease 2	BC104385|Trex2|24102|three prime repair exonuclease 2	AF151108|Trex2|24102|three prime repair exonuclease 2	NM_011907|Trex2|24102|three prime repair exonuclease 2
mm9_v1_chr9_-_50817077_50817177	0.924834	RUNX1..3.p2	AB067780|Sik2|235344|salt inducible kinase 2	AK090386|Sik2|235344|salt inducible kinase 2	AK028526|Sik2|235344|salt inducible kinase 2	AK041032|Sik2|235344|salt inducible kinase 2	NM_178710|Sik2|235344|salt inducible kinase 2
mm9_v1_chr4_+_106986972_106987035	0.924057	RUNX1..3.p2	AK138108|Yipf1|230584|Yip1 domain family, member 1	AK081205|Yipf1|230584|Yip1 domain family, member 1	AK157536|Yipf1|230584|Yip1 domain family, member 1	AK077502|Yipf1|230584|Yip1 domain family, member 1	BC009080|Yipf1|230584|Yip1 domain family, member 1	NM_145550|Yipf1|230584|Yip1 domain family, member 1
mm9_v1_chr6_-_33010151_33010266	0.922941	RUNX1..3.p2	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr17_-_37095420_37095443	0.922587	RUNX1..3.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr11_-_55854384_55854488	0.921054	RUNX1..3.p2	AY057384|Nmur2|216749|neuromedin U receptor 2	BC137611|Nmur2|216749|neuromedin U receptor 2	AK036756|Nmur2|216749|neuromedin U receptor 2	NM_153079|Nmur2|216749|neuromedin U receptor 2
mm9_v1_chr9_-_13631482_13631562	0.920602	RUNX1..3.p2	BC056968|Cep57|74360|centrosomal protein 57	AY251192|Cep57|74360|centrosomal protein 57	AK014873|Cep57|74360|centrosomal protein 57	BC030353|Cep57|74360|centrosomal protein 57	AK129053|Cep57|74360|centrosomal protein 57	NM_026665|Cep57|74360|centrosomal protein 57
mm9_v1_chr3_+_95733163_95733182	0.919324	RUNX1..3.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr1_+_89991575_89991689	0.917594	RUNX1..3.p2	NM_201642|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK159496|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK128918|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK162317|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK165465|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK154973|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141205|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141206|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AY227199|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK144599|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK153157|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C
mm9_v1_chr5_+_145016060_145016213	0.913028	RUNX1..3.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr7_+_3655602_3655652	0.912036	RUNX1..3.p2	AK081889|Rps9|76846|ribosomal protein S9	AK151621|Rps9|76846|ribosomal protein S9	AK050591|Rps9|76846|ribosomal protein S9	AK150988|Rps9|76846|ribosomal protein S9	NM_029767|Rps9|76846|ribosomal protein S9	AK151029|Rps9|76846|ribosomal protein S9	AK150800|Rps9|76846|ribosomal protein S9	BC031746|Rps9|76846|ribosomal protein S9
mm9_v1_chr14_+_79601537_79601578	0.908713	RUNX1..3.p2	
mm9_v1_chr9_-_99040505_99040647	0.908502	RUNX1..3.p2	AK090116|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	BC039650|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	AK154106|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	NM_029094|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm9_v1_chr12_-_106460915_106460946	0.906734	RUNX1..3.p2	BC052336|Tcl1|21432|T-cell lymphoma breakpoint 1	AF031956|Tcl1|21432|T-cell lymphoma breakpoint 1	Y15376|Tcl1|21432|T-cell lymphoma breakpoint 1	AK149361|Tcl1|21432|T-cell lymphoma breakpoint 1	AK163387|Tcl1|21432|T-cell lymphoma breakpoint 1	NM_009337|Tcl1|21432|T-cell lymphoma breakpoint 1
mm9_v1_chr6_-_52184909_52184937	0.906122	RUNX1..3.p2	BC050839|Hoxa10|15395|homeobox A10	L08757|Hoxa10|15395|homeobox A10	NM_008263|Hoxa10|15395|homeobox A10
mm9_v1_chr4_+_33219530_33219530	0.902509	RUNX1..3.p2	AF024620|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1	NM_008075|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1
mm9_v1_chr13_-_12553652_12553838	0.90165	RUNX1..3.p2	BC040243|Lgals8|56048|lectin, galactose binding, soluble 8	AK004782|Lgals8|56048|lectin, galactose binding, soluble 8	AF218069|Lgals8|56048|lectin, galactose binding, soluble 8	AK029685|Lgals8|56048|lectin, galactose binding, soluble 8	AK145881|Lgals8|56048|lectin, galactose binding, soluble 8	AK146746|Lgals8|56048|lectin, galactose binding, soluble 8	AK083350|Lgals8|56048|lectin, galactose binding, soluble 8	AK075736|Lgals8|56048|lectin, galactose binding, soluble 8	AK148939|Lgals8|56048|lectin, galactose binding, soluble 8	AK155066|Lgals8|56048|lectin, galactose binding, soluble 8
mm9_v1_chr1_+_130140700_130141098	0.901578	RUNX1..3.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr3_-_9833502_9833678	0.899812	RUNX1..3.p2	BC145328|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145761|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145763|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK172106|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156986|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK040230|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK041695|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK089329|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156000|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_001195031|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_053182|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1
mm9_v1_chr8_-_86217895_86217983	0.898722	RUNX1..3.p2	AK150062|Pkn1|320795|protein kinase N1	AK149649|Pkn1|320795|protein kinase N1	AK089431|Pkn1|320795|protein kinase N1	AK171297|Pkn1|320795|protein kinase N1
mm9_v1_chr6_-_87622057_87622161	0.897558	RUNX1..3.p2	BC002179|Aplf|72103|aprataxin and PNKP like factor	AK078805|Aplf|72103|aprataxin and PNKP like factor	AK034191|Aplf|72103|aprataxin and PNKP like factor	AK008513|Aplf|72103|aprataxin and PNKP like factor	NM_001170489|Aplf|72103|aprataxin and PNKP like factor	NM_024251|Aplf|72103|aprataxin and PNKP like factor
mm9_v1_chr7_-_4964839_4964843	0.895678	RUNX1..3.p2	AK135672|Fiz1|23877|Flt3 interacting zinc finger protein 1	NM_001110330|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr7_+_28964518_28964559	0.894158	RUNX1..3.p2	AK148342|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr2_-_25127860_25127956	0.893361	RUNX1..3.p2	AK088418|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK158412|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC037081|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC023033|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC048360|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AB041656|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK003356|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	NM_023464|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1
mm9_v1_chr4_+_116265582_116265626	0.890359	RUNX1..3.p2	BC002292|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr11_+_100437204_100437208	0.889253	RUNX1..3.p2	AK041969|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK140280|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	NM_001146318|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr9_-_13631343_13631398	0.887297	RUNX1..3.p2	AY225093|Cep57|74360|centrosomal protein 57	AK028458|Cep57|74360|centrosomal protein 57	AK028408|Cep57|74360|centrosomal protein 57
mm9_v1_chr14_-_73762840_73762848	0.882823	RUNX1..3.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr17_-_44872314_44872382	0.88106	RUNX1..3.p2	AF053956|Runx2|12393|runt related transcription factor 2	AK134925|Runx2|12393|runt related transcription factor 2
mm9_v1_chr2_-_60221287_60221381	0.88074	RUNX1..3.p2	AF395445|Ly75|17076|lymphocyte antigen 75	NM_013825|Ly75|17076|lymphocyte antigen 75	BC150734|Ly75|17076|lymphocyte antigen 75	U19271|Ly75|17076|lymphocyte antigen 75	AK049301|Ly75|17076|lymphocyte antigen 75	AK144922|Ly75|17076|lymphocyte antigen 75	AK157921|Ly75|17076|lymphocyte antigen 75
mm9_v1_chr1_+_24184448_24184693	0.880069	RUNX1..3.p2	NM_007740|Col9a1|12839|collagen, type IX, alpha 1	AK031071|Col9a1|12839|collagen, type IX, alpha 1	D17511|Col9a1|12839|collagen, type IX, alpha 1	BC046970|Col9a1|12839|collagen, type IX, alpha 1	L12215|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr6_+_97160736_97160744	0.876648	RUNX1..3.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chrX_-_137077133_137077229	0.874664	RUNX1..3.p2	AF201287|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr5_-_138066184_138066305	0.874537	RUNX1..3.p2	AK016870|Fbxo24|71176|F-box protein 24	NM_027708|Fbxo24|71176|F-box protein 24
mm9_v1_chr9_+_56924152_56924295	0.873373	RUNX1..3.p2	NM_001110350|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	NM_011378|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	U22394|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	AK220292|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	BC052716|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr12_+_85981968_85981968	0.87135	RUNX1..3.p2	NM_001168589|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chrX_-_71330931_71331012	0.870362	RUNX1..3.p2	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr15_+_84962507_84962603	0.869874	RUNX1..3.p2	AK017028|Ribc2|67747|RIB43A domain with coiled-coils 2	AK016311|Ribc2|67747|RIB43A domain with coiled-coils 2	NM_026357|Ribc2|67747|RIB43A domain with coiled-coils 2	AK006801|Ribc2|67747|RIB43A domain with coiled-coils 2	BC112373|Ribc2|67747|RIB43A domain with coiled-coils 2
mm9_v1_chr11_-_76391228_76391228	0.869696	RUNX1..3.p2	NM_198894|Abr|109934|active BCR-related gene
mm9_v1_chr2_+_74535801_74535819	0.867931	RUNX1..3.p2	NM_013555|Hoxd9|15438|homeobox D9
mm9_v1_chr8_+_97056910_97056982	0.867071	RUNX1..3.p2	BC031801|Cpne2|234577|copine II	NM_153507|Cpne2|234577|copine II	AK160238|Cpne2|234577|copine II	AK086165|Cpne2|234577|copine II	BC022128|Cpne2|234577|copine II
mm9_v1_chr11_+_99776064_99776064	0.86553	RUNX1..3.p2	NM_001126323|Gm11565|670550|predicted gene 11565
mm9_v1_chr6_-_119988624_119988681	0.864801	RUNX1..3.p2	AK172935|Wnk1|232341|WNK lysine deficient protein kinase 1	BC055788|Wnk1|232341|WNK lysine deficient protein kinase 1	BC046916|Wnk1|232341|WNK lysine deficient protein kinase 1	AK133738|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_001185020|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_001185021|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_198703|Wnk1|232341|WNK lysine deficient protein kinase 1
mm9_v1_chr10_-_80555271_80555374	0.862303	RUNX1..3.p2	AK050186|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	AF392874|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	BC028820|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr7_-_139791248_139791319	0.861649	RUNX1..3.p2	BC139757|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222444|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222445|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223361|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223362|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223363|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223674|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223675|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	NM_009123|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr9_-_58052107_58052125	0.859472	RUNX1..3.p2	NM_001161541|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr3_+_9250566_9250566	0.858391	RUNX1..3.p2	NM_177660|Zbtb10|229055|zinc finger and BTB domain containing 10
mm9_v1_chr17_+_29227908_29227961	0.853958	RUNX1..3.p2	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr6_-_82602836_82602872	0.852543	RUNX1..3.p2	BC023189|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK167631|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010135|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010300|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	NM_025882|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK145365|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK011595|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK160582|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)
mm9_v1_chr9_-_110556645_110556664	0.850578	RUNX1..3.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr6_+_126889979_126890004	0.849666	RUNX1..3.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr19_-_10945827_10945967	0.847261	RUNX1..3.p2	AK211175|Tmem109|68539|transmembrane protein 109	AK194142|Tmem109|68539|transmembrane protein 109
mm9_v1_chr9_-_99040343_99040411	0.847057	RUNX1..3.p2	AK081350|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm9_v1_chr7_-_106628533_106628572	0.839198	RUNX1..3.p2	
mm9_v1_chr7_-_17260959_17261053	0.836839	RUNX1..3.p2	BC099491|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	AK049385|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	BC125404|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	BC125406|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	NM_175315|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15
mm9_v1_chr11_+_85646116_85646116	0.833188	RUNX1..3.p2	NM_009324|Tbx2|21385|T-box 2
mm9_v1_chr10_-_77432541_77432616	0.829253	RUNX1..3.p2	AK039405|Trpm2|28240|transient receptor potential cation channel, subfamily M, member 2	AB166747|Trpm2|28240|transient receptor potential cation channel, subfamily M, member 2	NM_138301|Trpm2|28240|transient receptor potential cation channel, subfamily M, member 2
mm9_v1_chr8_-_108535317_108535385	0.827941	RUNX1..3.p2	AK010396|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	AK163480|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC058568|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120556|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120582|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	NM_028038|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm9_v1_chr4_+_143204905_143204905	0.826963	RUNX1..3.p2	NM_001126324|Gm13083|279185|predicted gene 13083
mm9_v1_chr14_-_73109609_73109649	0.821931	RUNX1..3.p2	BC144880|Fndc3a|319448|fibronectin type III domain containing 3A	AK154756|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr6_+_67216948_67217032	0.820239	RUNX1..3.p2	AK004678|Serbp1|66870|serpine1 mRNA binding protein 1	NM_001113564|Serbp1|66870|serpine1 mRNA binding protein 1	NM_001113565|Serbp1|66870|serpine1 mRNA binding protein 1	NM_001113566|Serbp1|66870|serpine1 mRNA binding protein 1	NM_025814|Serbp1|66870|serpine1 mRNA binding protein 1	AK010860|Serbp1|66870|serpine1 mRNA binding protein 1	AK144764|Serbp1|66870|serpine1 mRNA binding protein 1	AK158095|Serbp1|66870|serpine1 mRNA binding protein 1	AK010851|Serbp1|66870|serpine1 mRNA binding protein 1	AK011051|Serbp1|66870|serpine1 mRNA binding protein 1	AK149505|Serbp1|66870|serpine1 mRNA binding protein 1	AK012390|Serbp1|66870|serpine1 mRNA binding protein 1	AK088278|Serbp1|66870|serpine1 mRNA binding protein 1	AK131990|Serbp1|66870|serpine1 mRNA binding protein 1	AK135473|Serbp1|66870|serpine1 mRNA binding protein 1	AK139670|Serbp1|66870|serpine1 mRNA binding protein 1	AK146418|Serbp1|66870|serpine1 mRNA binding protein 1	AK045190|Serbp1|66870|serpine1 mRNA binding protein 1	BC006030|Serbp1|66870|serpine1 mRNA binding protein 1	BC013665|Serbp1|66870|serpine1 mRNA binding protein 1	BC030502|Serbp1|66870|serpine1 mRNA binding protein 1
mm9_v1_chr8_+_112017926_112017974	0.820031	RUNX1..3.p2	AB029919|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	NM_019938|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138245|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138246|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1
mm9_v1_chr11_-_115971327_115971329	0.818532	RUNX1..3.p2	BC145059|Trim47|217333|tripartite motif-containing 47	BC132148|Trim47|217333|tripartite motif-containing 47	BC137953|Trim47|217333|tripartite motif-containing 47	NM_172570|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr4_-_70071302_70071482	0.817913	RUNX1..3.p2	BC086696|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK013550|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK129411|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	NM_145990|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	BC079888|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2
mm9_v1_chr11_+_102007677_102007679	0.815948	RUNX1..3.p2	AK075765|Nags|217214|N-acetylglutamate synthase	NM_178053|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr5_-_135382602_135382602	0.813724	RUNX1..3.p2	AK007170|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369079|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369080|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	BC114542|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_029681|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_194065|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)
mm9_v1_chr2_+_145685882_145685886	0.811349	RUNX1..3.p2	AK163047|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr10_+_42221973_42222268	0.810844	RUNX1..3.p2	BC116885|Snx3|54198|sorting nexin 3	BC116889|Snx3|54198|sorting nexin 3	AK145350|Snx3|54198|sorting nexin 3	AK154728|Snx3|54198|sorting nexin 3	AF062482|Snx3|54198|sorting nexin 3	AK007798|Snx3|54198|sorting nexin 3	AK013261|Snx3|54198|sorting nexin 3	AK018790|Snx3|54198|sorting nexin 3	AK189751|Snx3|54198|sorting nexin 3
mm9_v1_chrY_-_582062_582201	0.810156	RUNX1..3.p2	AK162410|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK220463|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK155922|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AF057367|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	BC053061|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK043154|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	NM_009484|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142344|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142512|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm9_v1_chr14_-_55272452_55272539	0.809088	RUNX1..3.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr11_-_70468019_70468032	0.807673	RUNX1..3.p2	X14425|Pfn1|18643|profilin 1
mm9_v1_chr10_+_23571267_23571295	0.80605	RUNX1..3.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr11_-_121380601_121380655	0.802363	RUNX1..3.p2	AK037240|Zfp750|319530|zinc finger protein 750	AK028879|Zfp750|319530|zinc finger protein 750	AK030690|Zfp750|319530|zinc finger protein 750	BC080834|Zfp750|319530|zinc finger protein 750	AK037185|Zfp750|319530|zinc finger protein 750	AK076268|Zfp750|319530|zinc finger protein 750	AK140792|Zfp750|319530|zinc finger protein 750	NM_178763|Zfp750|319530|zinc finger protein 750
mm9_v1_chr4_-_43022972_43023183	0.801646	RUNX1..3.p2	AY049715|Fancg|60534|Fanconi anemia, complementation group G	BC139763|Fancg|60534|Fanconi anemia, complementation group G	AF112439|Fancg|60534|Fanconi anemia, complementation group G	BC141282|Fancg|60534|Fanconi anemia, complementation group G	AF406951|Fancg|60534|Fanconi anemia, complementation group G	NM_001163233|Fancg|60534|Fanconi anemia, complementation group G	NM_053081|Fancg|60534|Fanconi anemia, complementation group G
mm9_v1_chr12_+_56404272_56404278	0.798187	RUNX1..3.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr3_-_90195440_90195485	0.797656	RUNX1..3.p2	
mm9_v1_chr17_+_35137851_35137869	0.796262	RUNX1..3.p2	NM_011690|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr15_+_28133520_28133520	0.79464	RUNX1..3.p2	AF466704|Dnahc5|110082|dynein, axonemal, heavy chain 5	AK054152|Dnahc5|110082|dynein, axonemal, heavy chain 5	NM_133365|Dnahc5|110082|dynein, axonemal, heavy chain 5
mm9_v1_chr12_-_74147370_74147450	0.793884	RUNX1..3.p2	X80339|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK031122|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr19_-_30623890_30624012	0.793203	RUNX1..3.p2	AF030433|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	BC050189|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	NM_010051|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK141693|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK144119|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)
mm9_v1_chr13_-_65307023_65307023	0.789697	RUNX1..3.p2	NM_175290|Nlrp4f|97895|NLR family, pyrin domain containing 4F
mm9_v1_chr15_-_34372832_34373030	0.787297	RUNX1..3.p2	BC092137|Rpl30|19946|ribosomal protein L30	BC069949|Rpl30|19946|ribosomal protein L30	BC086890|Rpl30|19946|ribosomal protein L30	AK002988|Rpl30|19946|ribosomal protein L30	AK137031|Rpl30|19946|ribosomal protein L30	BC086891|Rpl30|19946|ribosomal protein L30	BC100608|Rpl30|19946|ribosomal protein L30	NM_009083|Rpl30|19946|ribosomal protein L30	NM_001163485|Rpl30|19946|ribosomal protein L30
mm9_v1_chr7_-_28714448_28714480	0.783633	RUNX1..3.p2	AK079686|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	AK137340|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	NM_028538|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	AK160450|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	BC069987|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene
mm9_v1_chr7_+_133572272_133572289	0.782358	RUNX1..3.p2	BC015287|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	NM_030566|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2
mm9_v1_chr10_+_17516024_17516131	0.782311	RUNX1..3.p2	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr2_+_118214847_118214847	0.775839	RUNX1..3.p2	BC072637|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4	NM_001177806|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4
mm9_v1_chr13_+_97158340_97158355	0.775477	RUNX1..3.p2	AK098149|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr3_-_88964115_88964123	0.774873	RUNX1..3.p2	AK082719|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chr2_-_13192850_13192974	0.768456	RUNX1..3.p2	X63039|Rsu1|20163|Ras suppressor protein 1	BC003827|Rsu1|20163|Ras suppressor protein 1	NM_009105|Rsu1|20163|Ras suppressor protein 1	AK150011|Rsu1|20163|Ras suppressor protein 1	AK149835|Rsu1|20163|Ras suppressor protein 1	AK152655|Rsu1|20163|Ras suppressor protein 1	AK009288|Rsu1|20163|Ras suppressor protein 1	AK011857|Rsu1|20163|Ras suppressor protein 1	AK135491|Rsu1|20163|Ras suppressor protein 1	AK169076|Rsu1|20163|Ras suppressor protein 1
mm9_v1_chr6_+_133479206_133479206	0.767278	RUNX1..3.p2	NM_001185040|Gm5885|545884|predicted gene 5885
mm9_v1_chr11_+_82705625_82705646	0.767099	RUNX1..3.p2	AK019639|Fndc8|78919|fibronectin type III domain containing 8	BC120835|Fndc8|78919|fibronectin type III domain containing 8	BC137682|Fndc8|78919|fibronectin type III domain containing 8	NM_030224|Fndc8|78919|fibronectin type III domain containing 8
mm9_v1_chr13_-_74199688_74199784	0.766605	RUNX1..3.p2	BC080681|Cep72|74470|centrosomal protein 72	BC060686|Cep72|74470|centrosomal protein 72	AK017134|Cep72|74470|centrosomal protein 72	AK034892|Cep72|74470|centrosomal protein 72	NM_028959|Cep72|74470|centrosomal protein 72
mm9_v1_chr10_-_68004607_68004622	0.766391	RUNX1..3.p2	BC087900|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK006661|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK029622|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	NM_028491|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene
mm9_v1_chr2_+_118214352_118214370	0.764634	RUNX1..3.p2	AJ243533|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4	NM_013719|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4	BC023958|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4	AF193343|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4
mm9_v1_chr15_+_73582208_73582380	0.762975	RUNX1..3.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr15_-_82160509_82160628	0.762863	RUNX1..3.p2	AK198447|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr6_+_3944011_3944021	0.759025	RUNX1..3.p2	AK020863|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	AK020903|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_010314|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	BC023064|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm9_v1_chr13_+_89680393_89680435	0.754498	RUNX1..3.p2	BC066853|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr19_+_6226400_6226412	0.753326	RUNX1..3.p2	AF260740|Gpha2|170458|glycoprotein hormone alpha 2	BC062804|Gpha2|170458|glycoprotein hormone alpha 2	NM_130453|Gpha2|170458|glycoprotein hormone alpha 2	BC132274|Gpha2|170458|glycoprotein hormone alpha 2	BC132562|Gpha2|170458|glycoprotein hormone alpha 2
mm9_v1_chr2_-_152758906_152758943	0.751787	RUNX1..3.p2	AK152669|Foxs1|14239|forkhead box S1	BC096604|Foxs1|14239|forkhead box S1	BC131937|Foxs1|14239|forkhead box S1	BC131939|Foxs1|14239|forkhead box S1	AK077935|Foxs1|14239|forkhead box S1	NM_010226|Foxs1|14239|forkhead box S1
mm9_v1_chr6_-_97202685_97202773	0.746915	RUNX1..3.p2	AK052890|Lmod3|320502|leiomodin 3 (fetal)	BC127157|Lmod3|320502|leiomodin 3 (fetal)	AK030676|Lmod3|320502|leiomodin 3 (fetal)	NM_001081157|Lmod3|320502|leiomodin 3 (fetal)
mm9_v1_chr4_+_154624080_154624114	0.746858	RUNX1..3.p2	AK003268|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	BC117034|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	BC117036|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	AK144436|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	BC096420|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene
mm9_v1_chr2_-_60391245_60391354	0.741277	RUNX1..3.p2	BC141355|Pla2r1|18779|phospholipase A2 receptor 1	BC141356|Pla2r1|18779|phospholipase A2 receptor 1	D30779|Pla2r1|18779|phospholipase A2 receptor 1	NM_008867|Pla2r1|18779|phospholipase A2 receptor 1	BC048780|Pla2r1|18779|phospholipase A2 receptor 1	AK011427|Pla2r1|18779|phospholipase A2 receptor 1	AK143853|Pla2r1|18779|phospholipase A2 receptor 1
mm9_v1_chr5_-_24046180_24046274	0.739796	RUNX1..3.p2	AK052929|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141311|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141313|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AK028538|Asb10|117590|ankyrin repeat and SOCS box-containing 10	NM_080444|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AF398971|Asb10|117590|ankyrin repeat and SOCS box-containing 10
mm9_v1_chr17_+_26813327_26813409	0.736834	RUNX1..3.p2	AK017760|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	NM_025272|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK159669|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK134836|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK007610|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK008464|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK168015|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	BC024733|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK013229|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK030335|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E
mm9_v1_chr4_-_115612507_115612530	0.732553	RUNX1..3.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chr8_+_64406883_64407005	0.729967	RUNX1..3.p2	AK036495|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	NM_001081215|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	BC043663|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
mm9_v1_chr17_+_56752805_56752873	0.729333	RUNX1..3.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chr10_-_25255955_25256077	0.728353	RUNX1..3.p2	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chrX_+_12164878_12165013	0.727293	RUNX1..3.p2	NM_027439|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK168139|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK076495|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK017482|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK151735|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK029405|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AB192471|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	BC014706|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2
mm9_v1_chr11_-_93746982_93747028	0.72711	RUNX1..3.p2	AK154637|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK032265|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr19_-_38118066_38118066	0.726994	RUNX1..3.p2	NM_001099634|Myof|226101|myoferlin
mm9_v1_chr5_-_54098762_54098942	0.726038	RUNX1..3.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr5_+_98683202_98683430	0.725703	RUNX1..3.p2	AK028894|Fgf5|14176|fibroblast growth factor 5	NM_010203|Fgf5|14176|fibroblast growth factor 5	BC071227|Fgf5|14176|fibroblast growth factor 5	AK028694|Fgf5|14176|fibroblast growth factor 5	AB016516|Fgf5|14176|fibroblast growth factor 5	M30643|Fgf5|14176|fibroblast growth factor 5
mm9_v1_chr3_-_116317504_116317504	0.724375	RUNX1..3.p2	AK039588|Ccdc76|229780|coiled-coil domain containing 76	NM_030016|Ccdc76|229780|coiled-coil domain containing 76
mm9_v1_chrX_-_99700697_99700735	0.722514	RUNX1..3.p2	AK131998|Hdac8|70315|histone deacetylase 8
mm9_v1_chr9_+_47970096_47970197	0.721702	RUNX1..3.p2	AK021362|Fam55d|244853|family with sequence similarity 55, member D	AK048132|Fam55d|244853|family with sequence similarity 55, member D	BC094249|Fam55d|244853|family with sequence similarity 55, member D	NM_172921|Fam55d|244853|family with sequence similarity 55, member D
mm9_v1_chr7_+_135021214_135021214	0.719197	RUNX1..3.p2	BC079907|Zfp646|233905|zinc finger protein 646	NM_172749|Zfp646|233905|zinc finger protein 646
mm9_v1_chr4_+_154256366_154256404	0.718012	RUNX1..3.p2	AK154366|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chr16_+_32496350_32496366	0.717646	RUNX1..3.p2	AK132780|Zdhhc19|245308|zinc finger, DHHC domain containing 19	AK133398|Zdhhc19|245308|zinc finger, DHHC domain containing 19	BC049761|Zdhhc19|245308|zinc finger, DHHC domain containing 19	NM_199309|Zdhhc19|245308|zinc finger, DHHC domain containing 19
mm9_v1_chr15_+_75799639_75799648	0.717332	RUNX1..3.p2	BC026404|Zfp707|69020|zinc finger protein 707
mm9_v1_chr11_-_116704762_116704824	0.717181	RUNX1..3.p2	BC056629|Jmjd6|107817|jumonji domain containing 6	EF527404|Jmjd6|107817|jumonji domain containing 6	NM_033398|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr1_-_72921098_72921102	0.716961	RUNX1..3.p2	L12447|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr14_+_63761085_63761315	0.716842	RUNX1..3.p2	X54966|Ctsb|13030|cathepsin B
mm9_v1_chr3_+_138189154_138189154	0.716609	RUNX1..3.p2	NM_007917|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr16_-_98072833_98072833	0.715935	RUNX1..3.p2	NM_144789|Prdm15|114604|PR domain containing 15
mm9_v1_chr2_+_164142482_164142497	0.714981	RUNX1..3.p2	BC119247|Svs6|20945|seminal vesicle secretory protein 6	BC119249|Svs6|20945|seminal vesicle secretory protein 6	AK020303|Svs6|20945|seminal vesicle secretory protein 6	NM_013679|Svs6|20945|seminal vesicle secretory protein 6	L11393|Svs6|20945|seminal vesicle secretory protein 6	S65753|Svs6|20945|seminal vesicle secretory protein 6
mm9_v1_chr3_+_88968894_88969004	0.714085	RUNX1..3.p2	AF033564|Clk2|12748|CDC-like kinase 2
mm9_v1_chrX_-_159267249_159267385	0.713884	RUNX1..3.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr11_-_62190182_62190262	0.713667	RUNX1..3.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr14_+_51427582_51427645	0.713467	RUNX1..3.p2	AK076193|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AK141876|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AJ007780|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	BC052000|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	BC062150|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	NM_009632|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AF072521|Parp2|11546|poly (ADP-ribose) polymerase family, member 2
mm9_v1_chr11_+_87881747_87881842	0.712308	RUNX1..3.p2	AF104410|Vezf1|22344|vascular endothelial zinc finger 1	NM_016686|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr1_-_174825160_174825190	0.712177	RUNX1..3.p2	M23552|Apcs|20219|serum amyloid P-component	X14079|Apcs|20219|serum amyloid P-component	Y00426|Apcs|20219|serum amyloid P-component	NM_011318|Apcs|20219|serum amyloid P-component
mm9_v1_chr17_-_37095181_37095245	0.712121	RUNX1..3.p2	AF230339|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr9_+_72655019_72655080	0.711697	RUNX1..3.p2	AY630257|Prtg|235472|protogenin homolog (Gallus gallus)	DQ360114|Prtg|235472|protogenin homolog (Gallus gallus)	NM_175485|Prtg|235472|protogenin homolog (Gallus gallus)
mm9_v1_chr4_-_115726466_115726490	0.709058	RUNX1..3.p2	AK012994|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4	NM_028142|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chrX_+_75614981_75614981	0.708455	RUNX1..3.p2	AK015598|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116859|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116861|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	NM_001177966|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene
mm9_v1_chr9_+_44206431_44206438	0.704673	RUNX1..3.p2	AK003620|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF080469|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr7_+_52253028_52253155	0.700855	RUNX1..3.p2	AK013944|Irf3|54131|interferon regulatory factor 3	NM_016849|Irf3|54131|interferon regulatory factor 3	AK146378|Irf3|54131|interferon regulatory factor 3	AK151750|Irf3|54131|interferon regulatory factor 3	AK152689|Irf3|54131|interferon regulatory factor 3	U75839|Irf3|54131|interferon regulatory factor 3	AK145977|Irf3|54131|interferon regulatory factor 3	BC023244|Irf3|54131|interferon regulatory factor 3	AK050570|Irf3|54131|interferon regulatory factor 3	BC003233|Irf3|54131|interferon regulatory factor 3	BC050882|Irf3|54131|interferon regulatory factor 3
mm9_v1_chr11_+_22902903_22902903	0.699354	RUNX1..3.p2	AK194972|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)
mm9_v1_chr2_-_84662710_84662808	0.69792	RUNX1..3.p2	AK003989|Smtnl1|68678|smoothelin-like 1	BC002317|Smtnl1|68678|smoothelin-like 1	NM_024230|Smtnl1|68678|smoothelin-like 1
mm9_v1_chr14_-_73762933_73762949	0.697754	RUNX1..3.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_+_40754552_40754775	0.695069	RUNX1..3.p2	AK160155|Larp1b|214048|La ribonucleoprotein domain family, member 1B	NM_001040399|Larp1b|214048|La ribonucleoprotein domain family, member 1B	AK076732|Larp1b|214048|La ribonucleoprotein domain family, member 1B	AK163348|Larp1b|214048|La ribonucleoprotein domain family, member 1B
mm9_v1_chr19_+_8829988_8830019	0.692363	RUNX1..3.p2	
mm9_v1_chr4_+_33118447_33118538	0.689927	RUNX1..3.p2	BC024623|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK003050|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AJ245899|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK149985|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK031669|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1
mm9_v1_chr11_+_8948594_8948715	0.6896	RUNX1..3.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr2_-_70856430_70856434	0.687208	RUNX1..3.p2	NM_001110512|Mettl8|228019|methyltransferase like 8	DQ230973|Mettl8|228019|methyltransferase like 8	DQ230974|Mettl8|228019|methyltransferase like 8
mm9_v1_chr3_+_90024674_90024714	0.686882	RUNX1..3.p2	BC027214|Rab13|68328|RAB13, member RAS oncogene family
mm9_v1_chr11_-_97643718_97643767	0.686824	RUNX1..3.p2	NM_022891|Rpl23|65019|ribosomal protein L23
mm9_v1_chrX_+_57252655_57252676	0.686397	RUNX1..3.p2	M23109|F9|14071|coagulation factor IX
mm9_v1_chr9_-_21722533_21722626	0.686389	RUNX1..3.p2	BC010779|Rab3d|19340|RAB3D, member RAS oncogene family	AF263365|Rab3d|19340|RAB3D, member RAS oncogene family	AK078462|Rab3d|19340|RAB3D, member RAS oncogene family	AK169369|Rab3d|19340|RAB3D, member RAS oncogene family	NM_031874|Rab3d|19340|RAB3D, member RAS oncogene family	BC020010|Rab3d|19340|RAB3D, member RAS oncogene family	AK048395|Rab3d|19340|RAB3D, member RAS oncogene family
mm9_v1_chr17_+_8358382_8358453	0.685293	RUNX1..3.p2	AK016110|Fgfr1op|75296|Fgfr1 oncogene partner	NM_001197046|Fgfr1op|75296|Fgfr1 oncogene partner	NM_201230|Fgfr1op|75296|Fgfr1 oncogene partner	AK029470|Fgfr1op|75296|Fgfr1 oncogene partner	BC108331|Fgfr1op|75296|Fgfr1 oncogene partner	BC080717|Fgfr1op|75296|Fgfr1 oncogene partner	AK031261|Fgfr1op|75296|Fgfr1 oncogene partner	BC050774|Fgfr1op|75296|Fgfr1 oncogene partner	AK050389|Fgfr1op|75296|Fgfr1 oncogene partner	BC058804|Fgfr1op|75296|Fgfr1 oncogene partner	AK028778|Fgfr1op|75296|Fgfr1 oncogene partner
mm9_v1_chr4_-_138281116_138281156	0.684027	RUNX1..3.p2	AK045964|Ubxn10|212190|UBX domain protein 10	AK161296|Ubxn10|212190|UBX domain protein 10	AK080662|Ubxn10|212190|UBX domain protein 10
mm9_v1_chr8_-_124984513_124984632	0.682546	RUNX1..3.p2	AF133714|Snai3|30927|snail homolog 3 (Drosophila)	AF195655|Snai3|30927|snail homolog 3 (Drosophila)	BC100724|Snai3|30927|snail homolog 3 (Drosophila)	BC100726|Snai3|30927|snail homolog 3 (Drosophila)	BC100727|Snai3|30927|snail homolog 3 (Drosophila)	AK089285|Snai3|30927|snail homolog 3 (Drosophila)	AK042234|Snai3|30927|snail homolog 3 (Drosophila)	NM_013914|Snai3|30927|snail homolog 3 (Drosophila)	AK153633|Snai3|30927|snail homolog 3 (Drosophila)
mm9_v1_chr12_-_74147683_74147691	0.681958	RUNX1..3.p2	BC023304|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr1_+_95721816_95721878	0.680797	RUNX1..3.p2	AK170226|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	NM_178882|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK141691|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC023277|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088200|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088554|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC117794|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase
mm9_v1_chr2_+_167514414_167514452	0.675863	RUNX1..3.p2	NM_009883|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta	X62600|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr7_+_57854559_57854582	0.674224	RUNX1..3.p2	AK077105|4933405O20Rik|243996|RIKEN cDNA 4933405O20 gene	NM_172901|4933405O20Rik|243996|RIKEN cDNA 4933405O20 gene	BC060958|4933405O20Rik|243996|RIKEN cDNA 4933405O20 gene
mm9_v1_chr1_-_157820378_157820386	0.673241	RUNX1..3.p2	AK044664|Cep350|74081|centrosomal protein 350	NM_001039184|Cep350|74081|centrosomal protein 350
mm9_v1_chr12_+_56404242_56404258	0.672433	RUNX1..3.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr12_-_56403949_56403990	0.671281	RUNX1..3.p2	BC024754|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028063|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AB041577|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK033405|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK163192|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK168298|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	NM_021529|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr4_+_154335029_154335081	0.670662	RUNX1..3.p2	AK139390|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK078170|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK087508|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK156545|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	NM_010419|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099863|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099864|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099865|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC103539|Hes5|15208|hairy and enhancer of split 5 (Drosophila)
mm9_v1_chr13_-_29947456_29947544	0.667738	RUNX1..3.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr6_-_143048580_143048646	0.667278	RUNX1..3.p2	AK029825|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK021056|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC027763|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK143732|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_001109688|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029081|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029897|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr11_-_59320141_59320141	0.664955	RUNX1..3.p2	NM_001130529|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17	NM_172941|Zkscan17|268417|zinc finger with KRAB and SCAN domains 17
mm9_v1_chr11_+_93905443_93905464	0.664367	RUNX1..3.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr3_+_88420105_88420182	0.662396	RUNX1..3.p2	NM_001198911|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK144972|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr17_-_37095372_37095414	0.662183	RUNX1..3.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr5_+_46061125_46061269	0.661826	RUNX1..3.p2	NM_019438|Ncapg|54392|non-SMC condensin I complex, subunit G	AK017756|Ncapg|54392|non-SMC condensin I complex, subunit G
mm9_v1_chr3_-_54858963_54858976	0.661708	RUNX1..3.p2	AK077114|Ccna1|12427|cyclin A1	NM_007628|Ccna1|12427|cyclin A1	X84311|Ccna1|12427|cyclin A1
mm9_v1_chr19_-_55291933_55291946	0.660692	RUNX1..3.p2	AK049940|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr12_-_56403648_56403785	0.660493	RUNX1..3.p2	AK017550|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK013403|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138295|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138296|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AJ238247|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK087572|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK015746|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK040589|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK088240|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028254|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr9_+_21216277_21216346	0.660197	RUNX1..3.p2	NM_021888|Qtrt1|60507|queuine tRNA-ribosyltransferase 1	BC044811|Qtrt1|60507|queuine tRNA-ribosyltransferase 1	AK011586|Qtrt1|60507|queuine tRNA-ribosyltransferase 1	AB034632|Qtrt1|60507|queuine tRNA-ribosyltransferase 1
mm9_v1_chr10_+_93103936_93104198	0.659481	RUNX1..3.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr11_-_99476128_99476159	0.658233	RUNX1..3.p2	NM_001177537|Gm11562|100041477|predicted gene 11562	AK017442|Krtap2-4|71453|keratin associated protein 2-4	NM_027800|Krtap2-4|71453|keratin associated protein 2-4
mm9_v1_chr1_+_134314029_134314184	0.656486	RUNX1..3.p2	NM_172516|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK083696|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AY429676|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK020880|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	BC130226|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK132119|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK172954|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AY208852|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK145449|Dstyk|213452|dual serine/threonine and tyrosine protein kinase
mm9_v1_chr5_+_110681753_110681764	0.650967	RUNX1..3.p2	AK134966|Ankle2|71782|ankyrin repeat and LEM domain containing 2
mm9_v1_chr2_-_85504611_85504611	0.649665	RUNX1..3.p2	BC120642|Olfr154|27216|olfactory receptor 154	BC120644|Olfr154|27216|olfactory receptor 154	NM_013728|Olfr154|27216|olfactory receptor 154
mm9_v1_chr15_-_79913763_79913849	0.647805	RUNX1..3.p2	BC094059|Rpl3|27367|ribosomal protein L3	BC083134|Rpl3|27367|ribosomal protein L3	Y00225|Rpl3|27367|ribosomal protein L3	BC009655|Rpl3|27367|ribosomal protein L3	BC085495|Rpl3|27367|ribosomal protein L3	AK166433|Rpl3|27367|ribosomal protein L3	AK169321|Rpl3|27367|ribosomal protein L3	AK168126|Rpl3|27367|ribosomal protein L3	AK168224|Rpl3|27367|ribosomal protein L3	AK168744|Rpl3|27367|ribosomal protein L3	AK168040|Rpl3|27367|ribosomal protein L3	AK168059|Rpl3|27367|ribosomal protein L3	AK168128|Rpl3|27367|ribosomal protein L3	AK170819|Rpl3|27367|ribosomal protein L3	AK088993|Rpl3|27367|ribosomal protein L3	AK144518|Rpl3|27367|ribosomal protein L3	AK144816|Rpl3|27367|ribosomal protein L3	AK146502|Rpl3|27367|ribosomal protein L3	AK149494|Rpl3|27367|ribosomal protein L3	AK151057|Rpl3|27367|ribosomal protein L3	AK151084|Rpl3|27367|ribosomal protein L3	AK151142|Rpl3|27367|ribosomal protein L3	AK151426|Rpl3|27367|ribosomal protein L3	AK151596|Rpl3|27367|ribosomal protein L3	AK151740|Rpl3|27367|ribosomal protein L3	AK166825|Rpl3|27367|ribosomal protein L3	AK167787|Rpl3|27367|ribosomal protein L3	AK167947|Rpl3|27367|ribosomal protein L3	AK169060|Rpl3|27367|ribosomal protein L3	AK169235|Rpl3|27367|ribosomal protein L3	AK172280|Rpl3|27367|ribosomal protein L3	BC158039|Rpl3|27367|ribosomal protein L3	NM_013762|Rpl3|27367|ribosomal protein L3
mm9_v1_chr10_-_80561616_80561616	0.643809	RUNX1..3.p2	AK077258|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	NM_145365|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr11_-_77978936_77979062	0.642241	RUNX1..3.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr2_+_154959216_154959300	0.641978	RUNX1..3.p2	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chr3_-_88964078_88964108	0.641009	RUNX1..3.p2	AJ225124|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	NM_008227|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	AK032225|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chr11_+_120094240_120094260	0.640717	RUNX1..3.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr5_-_139960341_139960349	0.640303	RUNX1..3.p2	AF224494|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr2_-_155878682_155878682	0.639985	RUNX1..3.p2	NM_001136556|Fer1l4|74562|fer-1-like 4 (C. elegans)
mm9_v1_chr17_-_25929201_25929366	0.63907	RUNX1..3.p2	AK132031|Fam173a|214917|family with sequence similarity 173, member A	BC096050|Fam173a|214917|family with sequence similarity 173, member A	NM_145410|Fam173a|214917|family with sequence similarity 173, member A	AK162337|Fam173a|214917|family with sequence similarity 173, member A	AK146214|Fam173a|214917|family with sequence similarity 173, member A	BC008155|Fam173a|214917|family with sequence similarity 173, member A
mm9_v1_chr5_+_43907004_43907024	0.639005	RUNX1..3.p2	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr8_+_122099134_122099215	0.638974	RUNX1..3.p2	AK019633|Lrrc50|68270|leucine rich repeat containing 50	NM_026648|Lrrc50|68270|leucine rich repeat containing 50	BC050751|Lrrc50|68270|leucine rich repeat containing 50
mm9_v1_chr8_+_55686133_55686133	0.636917	RUNX1..3.p2	AF395083|Spata4|69281|spermatogenesis associated 4	AF530515|Spata4|69281|spermatogenesis associated 4	AK005612|Spata4|69281|spermatogenesis associated 4	BC048650|Spata4|69281|spermatogenesis associated 4	NM_133711|Spata4|69281|spermatogenesis associated 4
mm9_v1_chr12_+_16817772_16817797	0.635453	RUNX1..3.p2	AK035116|E2f6|50496|E2F transcription factor 6	AK146792|E2f6|50496|E2F transcription factor 6	BC057929|E2f6|50496|E2F transcription factor 6	BC019166|E2f6|50496|E2F transcription factor 6
mm9_v1_chr2_+_129024496_129024619	0.634792	RUNX1..3.p2	NM_001159593|Slc20a1|20515|solute carrier family 20, member 1	NM_015747|Slc20a1|20515|solute carrier family 20, member 1	AK084159|Slc20a1|20515|solute carrier family 20, member 1	AK155506|Slc20a1|20515|solute carrier family 20, member 1	AK035898|Slc20a1|20515|solute carrier family 20, member 1	AK089184|Slc20a1|20515|solute carrier family 20, member 1	AK003059|Slc20a1|20515|solute carrier family 20, member 1	BC015085|Slc20a1|20515|solute carrier family 20, member 1
mm9_v1_chr6_-_88396477_88396541	0.633687	RUNX1..3.p2	AF268871|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AF283518|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC099675|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK147924|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC024915|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK171885|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK028424|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK087501|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	NM_023060|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm9_v1_chr5_-_139960431_139960476	0.632048	RUNX1..3.p2	NM_001159908|Zfand2a|100494|zinc finger, AN1-type domain 2A	NM_133349|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr16_-_16560240_16560303	0.631836	RUNX1..3.p2	BC145523|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AF402611|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139232|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AF402613|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139234|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AK034504|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AK134961|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4
mm9_v1_chr7_+_77510266_77510283	0.631459	RUNX1..3.p2	AK045070|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr5_+_115994255_115994483	0.629336	RUNX1..3.p2	AF293883|Pxn|19303|paxillin	AK191714|Pxn|19303|paxillin	AK209978|Pxn|19303|paxillin
mm9_v1_chr10_+_93103715_93103796	0.629126	RUNX1..3.p2	NM_021320|Ntn4|57764|netrin 4
mm9_v1_chr17_+_29230715_29230763	0.62872	RUNX1..3.p2	AK139306|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK149910|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK170467|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	NM_007669|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK007630|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK089093|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	U24173|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	BC002043|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr19_+_10651924_10651980	0.6282	RUNX1..3.p2	AK169729|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK172638|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK040692|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK160179|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK168841|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK170911|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr2_+_180921963_180922240	0.628136	RUNX1..3.p2	AK002602|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC058516|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK154758|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK166314|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC100439|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK003282|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	NM_025598|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012327|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012037|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK014211|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC029225|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC091753|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012545|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm9_v1_chr3_+_100726415_100726537	0.627756	RUNX1..3.p2	AK150574|Trim45|229644|tripartite motif-containing 45	AK153571|Trim45|229644|tripartite motif-containing 45	NM_001165952|Trim45|229644|tripartite motif-containing 45	NM_001165953|Trim45|229644|tripartite motif-containing 45	NM_194343|Trim45|229644|tripartite motif-containing 45	BC057358|Trim45|229644|tripartite motif-containing 45
mm9_v1_chr12_+_8214912_8214977	0.627281	RUNX1..3.p2	NM_172401|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK079099|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167768|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167767|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK076460|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK086717|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162914|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	BC057311|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK036177|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162850|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene
mm9_v1_chr4_-_46209159_46209217	0.626762	RUNX1..3.p2	BC029241|Xpa|22590|xeroderma pigmentosum, complementation group A	AK008962|Xpa|22590|xeroderma pigmentosum, complementation group A	NM_011728|Xpa|22590|xeroderma pigmentosum, complementation group A	X74351|Xpa|22590|xeroderma pigmentosum, complementation group A
mm9_v1_chr14_+_99498642_99498692	0.626523	RUNX1..3.p2	AK017107|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029320|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029454|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr7_-_39056336_39056416	0.623485	RUNX1..3.p2	AK002855|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK003293|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	NM_025390|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK152948|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK150459|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK003908|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	BC011465|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK054466|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
mm9_v1_chr11_-_97048933_97049116	0.621688	RUNX1..3.p2	D67015|Kpnb1|16211|karyopherin (importin) beta 1	BC052438|Kpnb1|16211|karyopherin (importin) beta 1	BC052711|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr11_-_102559011_102559087	0.618759	RUNX1..3.p2	AK166820|Ccdc43|52715|coiled-coil domain containing 43	AK009319|Ccdc43|52715|coiled-coil domain containing 43	AK011254|Ccdc43|52715|coiled-coil domain containing 43	NM_025918|Ccdc43|52715|coiled-coil domain containing 43	AK028834|Ccdc43|52715|coiled-coil domain containing 43	AK161543|Ccdc43|52715|coiled-coil domain containing 43	BC058520|Ccdc43|52715|coiled-coil domain containing 43	BC061076|Ccdc43|52715|coiled-coil domain containing 43
mm9_v1_chr9_-_45763233_45763277	0.618491	RUNX1..3.p2	AK155875|Sidt2|214597|SID1 transmembrane family, member 2	AK152371|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr19_+_5447546_5447754	0.617761	RUNX1..3.p2	AK144785|Fosl1|14283|fos-like antigen 1	NM_010235|Fosl1|14283|fos-like antigen 1	AK144839|Fosl1|14283|fos-like antigen 1	AK145035|Fosl1|14283|fos-like antigen 1	BC052917|Fosl1|14283|fos-like antigen 1	U34245|Fosl1|14283|fos-like antigen 1
mm9_v1_chr12_-_86715612_86715842	0.613183	RUNX1..3.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr9_-_100386803_100386891	0.611637	RUNX1..3.p2	BC107263|Il20rb|213208|interleukin 20 receptor beta	BC107264|Il20rb|213208|interleukin 20 receptor beta	BC148190|Il20rb|213208|interleukin 20 receptor beta	NM_001033543|Il20rb|213208|interleukin 20 receptor beta
mm9_v1_chr7_-_29551412_29551528	0.610307	RUNX1..3.p2	AK156731|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AY176058|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK010218|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	BC021938|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	U19799|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr11_-_95007011_95007114	0.609997	RUNX1..3.p2	AK145133|Dlx4|13394|distal-less homeobox 4	NM_007867|Dlx4|13394|distal-less homeobox 4
mm9_v1_chr11_+_115323786_115323874	0.607836	RUNX1..3.p2	NM_001080934|Slc16a5|217316|solute carrier family 16 (monocarboxylic acid transporters), member 5	AK079757|Slc16a5|217316|solute carrier family 16 (monocarboxylic acid transporters), member 5	BC172170|Slc16a5|217316|solute carrier family 16 (monocarboxylic acid transporters), member 5
mm9_v1_chr14_+_32454236_32454303	0.607501	RUNX1..3.p2	NM_025295|Btd|26363|biotinidase	AK005506|Btd|26363|biotinidase	AK135375|Btd|26363|biotinidase	BC024051|Btd|26363|biotinidase
mm9_v1_chr12_-_112127299_112127357	0.606544	RUNX1..3.p2	BC021867|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK004355|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK076126|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK160662|Cinp|67236|cyclin-dependent kinase 2 interacting protein	NM_026048|Cinp|67236|cyclin-dependent kinase 2 interacting protein	BC011066|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK007812|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK032155|Cinp|67236|cyclin-dependent kinase 2 interacting protein
mm9_v1_chr11_+_5469686_5469713	0.605161	RUNX1..3.p2	AK132751|Ankrd36|76389|ankyrin repeat domain 36	NM_023816|Ankrd36|76389|ankyrin repeat domain 36	AF294328|Ankrd36|76389|ankyrin repeat domain 36	AK005925|Ankrd36|76389|ankyrin repeat domain 36
mm9_v1_chr12_-_4234293_4234293	0.602669	RUNX1..3.p2	AK029226|Cenpo|52504|centromere protein O	NM_134046|Cenpo|52504|centromere protein O
mm9_v1_chr4_-_43783879_43783880	0.602449	RUNX1..3.p2	BC113135|Olfr159|29849|olfactory receptor 159	BC134348|Olfr159|29849|olfactory receptor 159	NM_019476|Olfr159|29849|olfactory receptor 159
mm9_v1_chr4_-_147242827_147242827	0.598914	RUNX1..3.p2	FJ618908|Miip|28010|migration and invasion inhibitory protein	NM_001025365|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr7_-_56892061_56892218	0.595757	RUNX1..3.p2	BC082541|Dbx1|13172|developing brain homeobox 1	NM_001005232|Dbx1|13172|developing brain homeobox 1	S75837|Dbx1|13172|developing brain homeobox 1
mm9_v1_chr14_-_49685853_49686079	0.595715	RUNX1..3.p2	AK134562|Exoc5|105504|exocyst complex component 5	BC049967|Exoc5|105504|exocyst complex component 5	AK167145|Exoc5|105504|exocyst complex component 5	AK170148|Exoc5|105504|exocyst complex component 5	AK157473|Exoc5|105504|exocyst complex component 5	AK171012|Exoc5|105504|exocyst complex component 5	AK164067|Exoc5|105504|exocyst complex component 5	AK152307|Exoc5|105504|exocyst complex component 5
mm9_v1_chr7_+_25134240_25134242	0.595643	RUNX1..3.p2	AK008654|Lypd5|76942|Ly6/Plaur domain containing 5	BC107186|Lypd5|76942|Ly6/Plaur domain containing 5	BC107187|Lypd5|76942|Ly6/Plaur domain containing 5	BC119485|Lypd5|76942|Ly6/Plaur domain containing 5	BC119486|Lypd5|76942|Ly6/Plaur domain containing 5	NM_029806|Lypd5|76942|Ly6/Plaur domain containing 5
mm9_v1_chr1_-_65003291_65003407	0.595507	RUNX1..3.p2	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr2_-_167515255_167515321	0.59297	RUNX1..3.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr2_+_91105271_91105495	0.59186	RUNX1..3.p2	NM_001166024|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	NM_023854|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	BC005495|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK149837|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	EF437354|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK009565|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK169144|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AF229439|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK168489|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2
mm9_v1_chr7_-_16807341_16807387	0.589829	RUNX1..3.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr1_-_72920776_72921027	0.588388	RUNX1..3.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr11_-_43649708_43649999	0.587697	RUNX1..3.p2	BC138653|Adra1b|11548|adrenergic receptor, alpha 1b	BC138654|Adra1b|11548|adrenergic receptor, alpha 1b	AK043877|Adra1b|11548|adrenergic receptor, alpha 1b	NM_007416|Adra1b|11548|adrenergic receptor, alpha 1b	AK139448|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr11_-_100511964_100512006	0.58751	RUNX1..3.p2	BC116726|Zfp385c|278304|zinc finger protein 385C	AK044299|Zfp385c|278304|zinc finger protein 385C	NM_177790|Zfp385c|278304|zinc finger protein 385C
mm9_v1_chr3_+_94641626_94641643	0.587503	RUNX1..3.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr11_+_67779990_67779991	0.582753	RUNX1..3.p2	AK018716|Stx8|55943|syntaxin 8
mm9_v1_chr5_+_3543815_3543891	0.579659	RUNX1..3.p2	AK008115|Fam133b|68152|family with sequence similarity 133, member B	AK019188|Fam133b|68152|family with sequence similarity 133, member B	NM_001042501|Fam133b|68152|family with sequence similarity 133, member B	AK020011|Fam133b|68152|family with sequence similarity 133, member B	BC147310|Fam133b|68152|family with sequence similarity 133, member B	BC147311|Fam133b|68152|family with sequence similarity 133, member B	BC172033|Fam133b|68152|family with sequence similarity 133, member B	BC027051|Fam133b|68152|family with sequence similarity 133, member B	AK161505|Fam133b|68152|family with sequence similarity 133, member B
mm9_v1_chr14_+_34030008_34030008	0.578409	RUNX1..3.p2	AK046097|Arhgap22|239027|Rho GTPase activating protein 22	NM_153800|Arhgap22|239027|Rho GTPase activating protein 22
mm9_v1_chr11_-_108205158_108205183	0.57353	RUNX1..3.p2	X52684|Prkca|18750|protein kinase C, alpha	X52685|Prkca|18750|protein kinase C, alpha
mm9_v1_chr7_+_31245076_31245076	0.568351	RUNX1..3.p2	AF172256|Nphs1|54631|nephrosis 1 homolog, nephrin (human)	NM_019459|Nphs1|54631|nephrosis 1 homolog, nephrin (human)
mm9_v1_chr8_+_62984911_62984927	0.564329	RUNX1..3.p2	AK075578|Aadat|23923|aminoadipate aminotransferase	AF072376|Aadat|23923|aminoadipate aminotransferase	NM_011834|Aadat|23923|aminoadipate aminotransferase	BC012637|Aadat|23923|aminoadipate aminotransferase
mm9_v1_chr1_-_44275718_44275775	0.562859	RUNX1..3.p2	BC100531|4832428D23Rik|403183|RIKEN cDNA 4832428D23 gene	AK029331|4832428D23Rik|403183|RIKEN cDNA 4832428D23 gene	NM_207281|4832428D23Rik|403183|RIKEN cDNA 4832428D23 gene
mm9_v1_chr7_+_112885261_112885270	0.559178	RUNX1..3.p2	U94479|Ilk|16202|integrin linked kinase
mm9_v1_chr19_+_4839365_4839460	0.55825	RUNX1..3.p2	NM_207268|Ccdc87|399599|coiled-coil domain containing 87	AK029877|Ccdc87|399599|coiled-coil domain containing 87	BC145660|Ccdc87|399599|coiled-coil domain containing 87
mm9_v1_chr11_-_100831819_100831899	0.55772	RUNX1..3.p2	AK154132|Ptrf|19285|polymerase I and transcript release factor	BC116701|Ptrf|19285|polymerase I and transcript release factor	BC117527|Ptrf|19285|polymerase I and transcript release factor	AF036249|Ptrf|19285|polymerase I and transcript release factor
mm9_v1_chr9_-_96531911_96531965	0.555002	RUNX1..3.p2	AB056433|Rasa2|114713|RAS p21 protein activator 2	AK034434|Rasa2|114713|RAS p21 protein activator 2	NM_053268|Rasa2|114713|RAS p21 protein activator 2	AK154499|Rasa2|114713|RAS p21 protein activator 2	AK166654|Rasa2|114713|RAS p21 protein activator 2
mm9_v1_chr15_+_75799711_75799736	0.552449	RUNX1..3.p2	AK005330|Zfp707|69020|zinc finger protein 707	AK153958|Zfp707|69020|zinc finger protein 707
mm9_v1_chr18_-_70301202_70301243	0.551815	RUNX1..3.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_-_148196635_148196670	0.551809	RUNX1..3.p2	AK007916|Ifitm3|66141|interferon induced transmembrane protein 3	AK003407|Ifitm3|66141|interferon induced transmembrane protein 3	NM_025378|Ifitm3|66141|interferon induced transmembrane protein 3	AY594690|Ifitm3|66141|interferon induced transmembrane protein 3
mm9_v1_chr13_+_13682675_13682689	0.551568	RUNX1..3.p2	L77884|Lyst|17101|lysosomal trafficking regulator	NM_010748|Lyst|17101|lysosomal trafficking regulator	U70015|Lyst|17101|lysosomal trafficking regulator
mm9_v1_chr1_+_173341811_173341858	0.549408	RUNX1..3.p2	NM_009480|Usf1|22278|upstream transcription factor 1
mm9_v1_chr5_-_34856561_34856665	0.549114	RUNX1..3.p2	AK160165|Tnip2|231130|TNFAIP3 interacting protein 2	BC052083|Tnip2|231130|TNFAIP3 interacting protein 2	AJ304865|Tnip2|231130|TNFAIP3 interacting protein 2	NM_139064|Tnip2|231130|TNFAIP3 interacting protein 2
mm9_v1_chr11_-_97643677_97643690	0.542607	RUNX1..3.p2	AK168133|Rpl23|65019|ribosomal protein L23	AF287271|Rpl23|65019|ribosomal protein L23	BC025918|Rpl23|65019|ribosomal protein L23	BC081448|Rpl23|65019|ribosomal protein L23
mm9_v1_chr15_+_90054711_90054794	0.540688	RUNX1..3.p2	AK143038|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK166344|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK147821|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	NM_001033441|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK170450|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK153580|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK171179|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)
mm9_v1_chr7_-_134351860_134352145	0.540473	RUNX1..3.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr3_-_92524255_92524273	0.539673	RUNX1..3.p2	BC060283|Lce1f|67828|late cornified envelope 1F	AK003518|Lce1f|67828|late cornified envelope 1F	NM_026394|Lce1f|67828|late cornified envelope 1F
mm9_v1_chr1_+_193149772_193149878	0.537956	RUNX1..3.p2	AK049641|Tmem206|66950|transmembrane protein 206	AK031270|Tmem206|66950|transmembrane protein 206	AK012107|Tmem206|66950|transmembrane protein 206	AK009526|Tmem206|66950|transmembrane protein 206	AK044482|Tmem206|66950|transmembrane protein 206	NM_025864|Tmem206|66950|transmembrane protein 206	BC027151|Tmem206|66950|transmembrane protein 206
mm9_v1_chr4_+_133958826_133958933	0.537716	RUNX1..3.p2	AK156774|Pafah2|100163|platelet-activating factor acetylhydrolase 2	BC021890|Pafah2|100163|platelet-activating factor acetylhydrolase 2	BC025938|Pafah2|100163|platelet-activating factor acetylhydrolase 2
mm9_v1_chr2_-_73418334_73418394	0.535721	RUNX1..3.p2	AK132589|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)	X03986|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)	AK029177|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)	NM_007389|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)	BC125439|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)	BC137678|Chrna1|11435|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm9_v1_chr11_-_8948907_8948993	0.534929	RUNX1..3.p2	BC109334|Sun3|194974|Sad1 and UNC84 domain containing 3	AK052771|Sun3|194974|Sad1 and UNC84 domain containing 3	NM_177576|Sun3|194974|Sad1 and UNC84 domain containing 3
mm9_v1_chr1_+_182834384_182834472	0.530287	RUNX1..3.p2	NM_133705|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK007535|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK165618|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	BC006882|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK167622|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK150756|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK152302|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr11_-_100334035_100334069	0.529788	RUNX1..3.p2	AK169910|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr14_+_120877711_120877728	0.527963	RUNX1..3.p2	BC043066|Rap2a|76108|RAS related protein 2a	AK075712|Rap2a|76108|RAS related protein 2a
mm9_v1_chr3_+_95733228_95733353	0.527711	RUNX1..3.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_-_130889248_130889304	0.525797	RUNX1..3.p2	AK086734|Adam33|110751|a disintegrin and metallopeptidase domain 33	AY054984|Adam33|110751|a disintegrin and metallopeptidase domain 33	BC138139|Adam33|110751|a disintegrin and metallopeptidase domain 33	AY382193|Adam33|110751|a disintegrin and metallopeptidase domain 33	AY382194|Adam33|110751|a disintegrin and metallopeptidase domain 33	AF472524|Adam33|110751|a disintegrin and metallopeptidase domain 33	AK053825|Adam33|110751|a disintegrin and metallopeptidase domain 33
mm9_v1_chr6_-_72908352_72908476	0.525145	RUNX1..3.p2	BC089326|Tmsb10|19240|thymosin, beta 10	BC145877|Tmsb10|19240|thymosin, beta 10	BC145879|Tmsb10|19240|thymosin, beta 10	BC094284|Tmsb10|19240|thymosin, beta 10	BC070416|Tmsb10|19240|thymosin, beta 10	BC048070|Tmsb10|19240|thymosin, beta 10	BC037153|Tmsb10|19240|thymosin, beta 10	BC080312|Tmsb10|19240|thymosin, beta 10	BC099374|Tmsb10|19240|thymosin, beta 10	BC093587|Tmsb10|19240|thymosin, beta 10	BC059777|Tmsb10|19240|thymosin, beta 10	BC092009|Tmsb10|19240|thymosin, beta 10	BC038926|Tmsb10|19240|thymosin, beta 10	AK019232|Tmsb10|19240|thymosin, beta 10	AK003178|Tmsb10|19240|thymosin, beta 10	AK005512|Tmsb10|19240|thymosin, beta 10	AK008557|Tmsb10|19240|thymosin, beta 10	AK012361|Tmsb10|19240|thymosin, beta 10	AK019212|Tmsb10|19240|thymosin, beta 10	AK131711|Tmsb10|19240|thymosin, beta 10	AK161987|Tmsb10|19240|thymosin, beta 10	NM_025284|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr13_+_32894609_32894767	0.523663	RUNX1..3.p2	AF208046|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chrX_+_50626600_50626621	0.522735	RUNX1..3.p2	AK015916|Fam122c|73866|family with sequence similarity 122, member C	AK015288|Fam122c|73866|family with sequence similarity 122, member C	NM_028671|Fam122c|73866|family with sequence similarity 122, member C	BC147640|Fam122c|73866|family with sequence similarity 122, member C	BC147646|Fam122c|73866|family with sequence similarity 122, member C	BC172114|Fam122c|73866|family with sequence similarity 122, member C
mm9_v1_chr9_+_21639937_21640039	0.521665	RUNX1..3.p2	NM_001080940|Gm6484|624219|predicted gene 6484	BC051501|Gm6484|624219|predicted gene 6484	BC024408|Gm6484|624219|predicted gene 6484	BC038127|Gm6484|624219|predicted gene 6484
mm9_v1_chr5_-_137041850_137041964	0.520887	RUNX1..3.p2	BC079570|Cux1|13047|cut-like homeobox 1
mm9_v1_chr8_-_27087111_27087235	0.517477	RUNX1..3.p2	BC024084|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK160068|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK159649|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK035264|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK152926|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK149883|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	NM_029884|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase
mm9_v1_chr1_+_136456754_136456771	0.51575	RUNX1..3.p2	NM_152895|Kdm5b|75605|lysine (K)-specific demethylase 5B	AK220451|Kdm5b|75605|lysine (K)-specific demethylase 5B	AY082429|Kdm5b|75605|lysine (K)-specific demethylase 5B	AY082430|Kdm5b|75605|lysine (K)-specific demethylase 5B	BC048180|Kdm5b|75605|lysine (K)-specific demethylase 5B	BC057318|Kdm5b|75605|lysine (K)-specific demethylase 5B
mm9_v1_chr13_-_21879086_21879086	0.514986	RUNX1..3.p2	NM_178184|Hist1h2an|319170|histone cluster 1, H2an
mm9_v1_chr5_+_76612903_76613006	0.514189	RUNX1..3.p2	NM_011626|Tmem165|21982|transmembrane protein 165	BC037638|Tmem165|21982|transmembrane protein 165	AK004829|Tmem165|21982|transmembrane protein 165	M23568|Tmem165|21982|transmembrane protein 165
mm9_v1_chr4_+_118867914_118868129	0.513163	RUNX1..3.p2	NM_024462|Ccdc23|69216|coiled-coil domain containing 23	AK010418|Ccdc23|69216|coiled-coil domain containing 23	BC002274|Ccdc23|69216|coiled-coil domain containing 23	AK079783|Ccdc23|69216|coiled-coil domain containing 23	NM_001038998|Ccdc23|69216|coiled-coil domain containing 23
mm9_v1_chr7_+_51097638_51097638	0.51211	RUNX1..3.p2	AK003996|Klk5|68668|kallikrein related-peptidase 5	BC139475|Klk5|68668|kallikrein related-peptidase 5	BC139478|Klk5|68668|kallikrein related-peptidase 5	NM_026806|Klk5|68668|kallikrein related-peptidase 5
mm9_v1_chr1_+_165925016_165925075	0.512105	RUNX1..3.p2	AK139786|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC052693|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	AK013137|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC038687|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC050143|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	NM_027279|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene
mm9_v1_chr9_-_51137021_51137021	0.511817	RUNX1..3.p2	AK007796|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene	NM_027217|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene
mm9_v1_chr13_-_49063188_49063196	0.511175	RUNX1..3.p2	BC158134|Fam120a|218236|family with sequence similarity 120, member A	NM_001033268|Fam120a|218236|family with sequence similarity 120, member A
mm9_v1_chr6_-_87759747_87759783	0.505506	RUNX1..3.p2	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr2_-_130889549_130889549	0.504301	RUNX1..3.p2	AB059632|Adam33|110751|a disintegrin and metallopeptidase domain 33	AB059633|Adam33|110751|a disintegrin and metallopeptidase domain 33	NM_001163529|Adam33|110751|a disintegrin and metallopeptidase domain 33	NM_033615|Adam33|110751|a disintegrin and metallopeptidase domain 33
mm9_v1_chr13_+_97158248_97158334	0.504289	RUNX1..3.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr19_+_57435735_57435759	0.502082	RUNX1..3.p2	BC062949|Fam160b1|226252|family with sequence similarity 160, member B1
mm9_v1_chr7_+_5996762_5996870	0.500546	RUNX1..3.p2	AK133284|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AY596194|Nlrp4c|83564|NLR family, pyrin domain containing 4C	NM_031389|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166817|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166869|Nlrp4c|83564|NLR family, pyrin domain containing 4C
mm9_v1_chr9_+_66006060_66006077	0.497633	RUNX1..3.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr10_-_117147757_117147818	0.497506	RUNX1..3.p2	AK168690|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC092270|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004719|Mdm2|17246|transformed mouse 3T3 cell double minute 2	NM_010786|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr4_+_154624074_154624074	0.493468	RUNX1..3.p2	AK011291|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	NM_001190445|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene
mm9_v1_chr15_+_73555186_73555261	0.490024	RUNX1..3.p2	AK004562|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr5_+_65498773_65498819	0.487629	RUNX1..3.p2	AK220195|Klhl5|71778|kelch-like 5 (Drosophila)	AK004982|Klhl5|71778|kelch-like 5 (Drosophila)
mm9_v1_chr4_-_118993081_118993127	0.48661	RUNX1..3.p2	BC050116|Ppih|66101|peptidyl prolyl isomerase H	BC016565|Ppih|66101|peptidyl prolyl isomerase H	BC098490|Ppih|66101|peptidyl prolyl isomerase H	AK136330|Ppih|66101|peptidyl prolyl isomerase H	AK005202|Ppih|66101|peptidyl prolyl isomerase H	AK014665|Ppih|66101|peptidyl prolyl isomerase H	AK164299|Ppih|66101|peptidyl prolyl isomerase H	AK003179|Ppih|66101|peptidyl prolyl isomerase H	AK008394|Ppih|66101|peptidyl prolyl isomerase H	AK134995|Ppih|66101|peptidyl prolyl isomerase H	NM_001110129|Ppih|66101|peptidyl prolyl isomerase H	NM_001110130|Ppih|66101|peptidyl prolyl isomerase H	NM_028677|Ppih|66101|peptidyl prolyl isomerase H
mm9_v1_chr16_+_44347501_44347594	0.483182	RUNX1..3.p2	NM_144550|Spice1|212514|spindle and centriole associated protein 1	AK165031|Spice1|212514|spindle and centriole associated protein 1	BC052381|Spice1|212514|spindle and centriole associated protein 1	BC056960|Spice1|212514|spindle and centriole associated protein 1	AK048789|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr5_-_89088843_89089007	0.481512	RUNX1..3.p2	AK208573|Grsf1|231413|G-rich RNA sequence binding factor 1	AK211991|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr12_+_72456427_72456435	0.479896	RUNX1..3.p2	
mm9_v1_chr2_+_156373311_156373449	0.479163	RUNX1..3.p2	NM_001164818|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	NM_026661|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK169526|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK018741|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK166203|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK028890|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	BC019988|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	BC020112|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK187905|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK201919|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK210506|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene
mm9_v1_chr6_+_113232300_113232305	0.478205	RUNX1..3.p2	AK042692|Cpne9|211232|copine family member IX	AK137422|Cpne9|211232|copine family member IX	NM_170673|Cpne9|211232|copine family member IX
mm9_v1_chr15_-_39688931_39689018	0.477537	RUNX1..3.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr16_+_10545494_10545538	0.477432	RUNX1..3.p2	AK089327|Clec16a|74374|C-type lectin domain family 16, member A	AK156927|Clec16a|74374|C-type lectin domain family 16, member A	AK170754|Clec16a|74374|C-type lectin domain family 16, member A	AK171134|Clec16a|74374|C-type lectin domain family 16, member A	BC138907|Clec16a|74374|C-type lectin domain family 16, member A	BC138909|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr5_-_137041588_137041697	0.477286	RUNX1..3.p2	AB041595|Cux1|13047|cut-like homeobox 1
mm9_v1_chr12_+_25183430_25183496	0.477104	RUNX1..3.p2	NM_020614|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC057167|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK165580|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK131963|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK015111|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC019993|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC086643|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK170313|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC069907|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC094035|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC125027|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC125028|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B
mm9_v1_chr16_+_10545479_10545491	0.475149	RUNX1..3.p2	AK122255|Clec16a|74374|C-type lectin domain family 16, member A	NM_177562|Clec16a|74374|C-type lectin domain family 16, member A	AK155314|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr2_+_28555680_28555693	0.472376	RUNX1..3.p2	NM_001033874|Ak8|68870|adenylate kinase 8	AK004439|Ak8|68870|adenylate kinase 8	BC100481|Ak8|68870|adenylate kinase 8	BC109352|Ak8|68870|adenylate kinase 8
mm9_v1_chr3_+_90024723_90024820	0.468314	RUNX1..3.p2	AK002303|Rab13|68328|RAB13, member RAS oncogene family	NM_026677|Rab13|68328|RAB13, member RAS oncogene family	AB232608|Rab13|68328|RAB13, member RAS oncogene family
mm9_v1_chr4_+_155590035_155590043	0.467168	RUNX1..3.p2	AK036660|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	NM_172417|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	AK040833|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene
mm9_v1_chr13_-_104968472_104968556	0.464662	RUNX1..3.p2	BC021756|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK084373|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK013956|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK167749|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK012141|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK010346|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK163342|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK149832|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093759|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093760|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_025879|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene
mm9_v1_chr19_-_6982516_6982562	0.463298	RUNX1..3.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr4_-_129055233_129055271	0.462719	RUNX1..3.p2	AK010736|Zbtb8a|73680|zinc finger and BTB domain containing 8a	NM_028603|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr2_+_31069953_31070220	0.462037	RUNX1..3.p2	BC055799|Gpr107|277463|G protein-coupled receptor 107	BC052649|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chr4_+_143002328_143002328	0.461945	RUNX1..3.p2	AK029142|Pramef8|242736|PRAME family member 8	NM_172877|Pramef8|242736|PRAME family member 8
mm9_v1_chr11_-_104303565_104303604	0.459231	RUNX1..3.p2	AK153679|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	AK122484|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	NM_001081045|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene
mm9_v1_chr9_+_108564418_108564538	0.458574	RUNX1..3.p2	AK161086|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK075624|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	NM_020520|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC029733|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK152436|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC052871|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm9_v1_chr6_-_128312829_128312952	0.456089	RUNX1..3.p2	AK156717|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	BC027368|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK146167|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK168313|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene
mm9_v1_chr1_+_17591981_17592085	0.45548	RUNX1..3.p2	AK030960|Pi15|94227|peptidase inhibitor 15	NM_053191|Pi15|94227|peptidase inhibitor 15	AK040961|Pi15|94227|peptidase inhibitor 15	AF329196|Pi15|94227|peptidase inhibitor 15	BC116705|Pi15|94227|peptidase inhibitor 15
mm9_v1_chr5_-_20930494_20930494	0.455436	RUNX1..3.p2	AK015926|Ccdc146|75172|coiled-coil domain containing 146	NM_029195|Ccdc146|75172|coiled-coil domain containing 146
mm9_v1_chr19_+_18706474_18706505	0.453686	RUNX1..3.p2	AK050579|BC016495|225994|cDNA sequence BC016495	BC016495|BC016495|225994|cDNA sequence BC016495	NM_145497|BC016495|225994|cDNA sequence BC016495
mm9_v1_chr10_-_128002934_128002985	0.450629	RUNX1..3.p2	BC046532|Pa2g4|18813|proliferation-associated 2G4	BC086788|Pa2g4|18813|proliferation-associated 2G4	BC028926|Pa2g4|18813|proliferation-associated 2G4	BC003777|Pa2g4|18813|proliferation-associated 2G4	BC005593|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr1_+_69873535_69873574	0.449633	RUNX1..3.p2	AK015884|Spag16|66722|sperm associated antigen 16	BC120668|Spag16|66722|sperm associated antigen 16	BC145006|Spag16|66722|sperm associated antigen 16	AF490391|Spag16|66722|sperm associated antigen 16	NM_029160|Spag16|66722|sperm associated antigen 16	AK083083|Spag16|66722|sperm associated antigen 16
mm9_v1_chr15_+_89153402_89153406	0.44843	RUNX1..3.p2	BC096428|Adm2|223780|adrenomedullin 2	NM_182928|Adm2|223780|adrenomedullin 2	AB121035|Adm2|223780|adrenomedullin 2
mm9_v1_chr2_+_101518568_101518743	0.448333	RUNX1..3.p2	AK041172|Traf6|22034|TNF receptor-associated factor 6	BC060705|Traf6|22034|TNF receptor-associated factor 6	NM_009424|Traf6|22034|TNF receptor-associated factor 6	AK155434|Traf6|22034|TNF receptor-associated factor 6	AK009110|Traf6|22034|TNF receptor-associated factor 6	D84655|Traf6|22034|TNF receptor-associated factor 6
mm9_v1_chr7_-_52252911_52252974	0.447606	RUNX1..3.p2	AK013411|Bcl2l12|75736|BCL2-like 12 (proline rich)	AK017362|Bcl2l12|75736|BCL2-like 12 (proline rich)	NM_029410|Bcl2l12|75736|BCL2-like 12 (proline rich)
mm9_v1_chr15_-_75739695_75739776	0.447277	RUNX1..3.p2	BC082536|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC079855|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC013059|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017616|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK044934|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK054335|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AF304351|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017796|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK010347|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_023240|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_029663|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm9_v1_chr1_+_192748986_192748990	0.446979	RUNX1..3.p2	NM_001199020|Angel2|52477|angel homolog 2 (Drosophila)	AK135709|Angel2|52477|angel homolog 2 (Drosophila)	AK166619|Angel2|52477|angel homolog 2 (Drosophila)
mm9_v1_chr4_+_59818521_59818521	0.44601	RUNX1..3.p2	AK147437|Snx30|209131|sorting nexin family member 30	NM_172468|Snx30|209131|sorting nexin family member 30
mm9_v1_chr3_+_19957807_19957987	0.444037	RUNX1..3.p2	NM_009210|Hltf|20585|helicase-like transcription factor	NM_144959|Hltf|20585|helicase-like transcription factor	AK141235|Hltf|20585|helicase-like transcription factor	AF010600|Hltf|20585|helicase-like transcription factor	AF165911|Hltf|20585|helicase-like transcription factor	BC057116|Hltf|20585|helicase-like transcription factor	BC059240|Hltf|20585|helicase-like transcription factor	AK142961|Hltf|20585|helicase-like transcription factor	AK166911|Hltf|20585|helicase-like transcription factor	AB221636|Hltf|20585|helicase-like transcription factor
mm9_v1_chr14_+_51823364_51823369	0.443984	RUNX1..3.p2	NM_001017422|Ear4|53877|eosinophil-associated, ribonuclease A family, member 4	NM_017389|Ear14|503847|eosinophil-associated, ribonuclease A family, member 14
mm9_v1_chr7_-_134537132_134537134	0.44372	RUNX1..3.p2	BC010442|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene	AK088474|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene	NM_198011|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene
mm9_v1_chr9_+_72892614_72892671	0.442139	RUNX1..3.p2	BC008173|Rab27a|11891|RAB27A, member RAS oncogene family	BC009656|Rab27a|11891|RAB27A, member RAS oncogene family	AK030529|Rab27a|11891|RAB27A, member RAS oncogene family	NM_023635|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr15_-_98748371_98748661	0.440357	RUNX1..3.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr3_+_51299153_51299205	0.44024	RUNX1..3.p2	
mm9_v1_chr15_-_84818368_84818512	0.440234	RUNX1..3.p2	AK149782|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	NM_001033273|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	AK170532|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene
mm9_v1_chr1_+_178744942_178745053	0.439753	RUNX1..3.p2	NM_029756|Sdccag8|76816|serologically defined colon cancer antigen 8	AK136921|Sdccag8|76816|serologically defined colon cancer antigen 8	AK051683|Sdccag8|76816|serologically defined colon cancer antigen 8	AK132316|Sdccag8|76816|serologically defined colon cancer antigen 8	AK012392|Sdccag8|76816|serologically defined colon cancer antigen 8	AK017691|Sdccag8|76816|serologically defined colon cancer antigen 8	BC016244|Sdccag8|76816|serologically defined colon cancer antigen 8	BC025138|Sdccag8|76816|serologically defined colon cancer antigen 8	AK133622|Sdccag8|76816|serologically defined colon cancer antigen 8
mm9_v1_chr9_-_121614076_121614146	0.438272	RUNX1..3.p2	AK029985|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	BC046289|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK031125|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK044249|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_001164562|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_178677|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm9_v1_chr13_-_98669545_98669547	0.438129	RUNX1..3.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr16_+_16983503_16983678	0.437992	RUNX1..3.p2	BC058258|Mapk1|26413|mitogen-activated protein kinase 1	D10939|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr4_-_147818818_147818893	0.436128	RUNX1..3.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr15_+_32107043_32107046	0.434379	RUNX1..3.p2	BC111811|Tas2r119|57254|taste receptor, type 2, member 119	BC128079|Tas2r119|57254|taste receptor, type 2, member 119	BC152359|Tas2r119|57254|taste receptor, type 2, member 119	NM_020503|Tas2r119|57254|taste receptor, type 2, member 119	BC128078|Tas2r119|57254|taste receptor, type 2, member 119
mm9_v1_chr4_+_19969198_19969248	0.433518	RUNX1..3.p2	NM_010281|Ggh|14590|gamma-glutamyl hydrolase	AF051102|Ggh|14590|gamma-glutamyl hydrolase	AK089996|Ggh|14590|gamma-glutamyl hydrolase
mm9_v1_chr14_-_70923865_70923890	0.431466	RUNX1..3.p2	BC061137|Sftpc|20389|surfactant associated protein C	NM_011359|Sftpc|20389|surfactant associated protein C
mm9_v1_chr11_-_97643692_97643709	0.428021	RUNX1..3.p2	AK012694|Rpl23|65019|ribosomal protein L23	AK018730|Rpl23|65019|ribosomal protein L23	AK150671|Rpl23|65019|ribosomal protein L23	AK002579|Rpl23|65019|ribosomal protein L23	AK010680|Rpl23|65019|ribosomal protein L23
mm9_v1_chr18_+_61886043_61886108	0.427776	RUNX1..3.p2	AK005240|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	AK133612|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC038318|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC047208|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene
mm9_v1_chr8_-_96496001_96496082	0.4277	RUNX1..3.p2	AK197102|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr5_+_28168688_28168939	0.427085	RUNX1..3.p2	AK141636|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A	BC115911|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A	BC116654|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A
mm9_v1_chrX_-_8563797_8563880	0.426471	RUNX1..3.p2	BC104363|Fthl17|83457|ferritin, heavy polypeptide-like 17	AF285569|Fthl17|83457|ferritin, heavy polypeptide-like 17	NM_001099326|Gm14458|100042782|predicted gene 14458
mm9_v1_chr2_-_87875293_87875294	0.425862	RUNX1..3.p2	AB061228|Olfr73|117004|olfactory receptor 73	NM_054090|Olfr73|117004|olfactory receptor 73	BC140145|Olfr73|117004|olfactory receptor 73	BC143167|Olfr73|117004|olfactory receptor 73	BC146832|Olfr73|117004|olfactory receptor 73
mm9_v1_chr10_-_20444654_20444883	0.42564	RUNX1..3.p2	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chrX_+_98449866_98450159	0.425292	RUNX1..3.p2	AF114260|Foxo4|54601|forkhead box O4	NM_018789|Foxo4|54601|forkhead box O4	AK157830|Foxo4|54601|forkhead box O4	BC099460|Foxo4|54601|forkhead box O4	BC139275|Foxo4|54601|forkhead box O4	BC139304|Foxo4|54601|forkhead box O4	AB032770|Foxo4|54601|forkhead box O4	AB221664|Foxo4|54601|forkhead box O4
mm9_v1_chr17_+_25270317_25270453	0.424869	RUNX1..3.p2	AK030444|Clcn7|26373|chloride channel 7	NM_011930|Clcn7|26373|chloride channel 7	BC054799|Clcn7|26373|chloride channel 7	BC050907|Clcn7|26373|chloride channel 7	BC053049|Clcn7|26373|chloride channel 7	AK128981|Clcn7|26373|chloride channel 7
mm9_v1_chr15_+_76181718_76181819	0.423705	RUNX1..3.p2	NM_001164607|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_001164608|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_026859|Maf1|68877|MAF1 homolog (S. cerevisiae)	BC016260|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK154047|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK042913|Maf1|68877|MAF1 homolog (S. cerevisiae)
mm9_v1_chr12_-_57446800_57446880	0.421382	RUNX1..3.p2	AK077125|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK154318|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK171164|Mbip|217588|MAP3K12 binding inhibitory protein 1	BC002277|Mbip|217588|MAP3K12 binding inhibitory protein 1	NM_145442|Mbip|217588|MAP3K12 binding inhibitory protein 1
mm9_v1_chr9_+_14305110_14305173	0.421243	RUNX1..3.p2	AK003834|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK002864|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK145249|Cwc15|66070|CWC15 homolog (S. cerevisiae)	BC004726|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK013670|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK167776|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK168365|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK003202|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AJ250394|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chrX_-_89028314_89028356	0.418315	RUNX1..3.p2	BC116773|Mageb5|74271|melanoma antigen, family B, 5	BC116775|Mageb5|74271|melanoma antigen, family B, 5	NM_028847|Mageb5|74271|melanoma antigen, family B, 5	AK006807|Mageb5|74271|melanoma antigen, family B, 5
mm9_v1_chr2_-_18314387_18314456	0.416923	RUNX1..3.p2	AK144228|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	BC080300|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK133582|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK012505|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_001190817|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_007869|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1
mm9_v1_chr15_-_76540861_76540977	0.416684	RUNX1..3.p2	AB039882|Recql4|79456|RecQ protein-like 4	BC131657|Recql4|79456|RecQ protein-like 4	BC131656|Recql4|79456|RecQ protein-like 4	AB175741|Recql4|79456|RecQ protein-like 4	NM_058214|Recql4|79456|RecQ protein-like 4	BC064680|Recql4|79456|RecQ protein-like 4	AK090260|Recql4|79456|RecQ protein-like 4
mm9_v1_chr18_+_36720238_36720319	0.415156	RUNX1..3.p2	NM_175375|Ankhd1|108857|ankyrin repeat and KH domain containing 1	AK080941|Ankhd1|108857|ankyrin repeat and KH domain containing 1
mm9_v1_chr1_-_134921914_134921968	0.411845	RUNX1..3.p2	AK028493|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AK161882|Mdm4|17248|transformed mouse 3T3 cell double minute 4	EU568360|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AK083349|Mdm4|17248|transformed mouse 3T3 cell double minute 4	NM_008575|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AK049576|Mdm4|17248|transformed mouse 3T3 cell double minute 4	BC003750|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AK049690|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AK017719|Mdm4|17248|transformed mouse 3T3 cell double minute 4	AF007110|Mdm4|17248|transformed mouse 3T3 cell double minute 4
mm9_v1_chr10_-_39706382_39706451	0.408559	RUNX1..3.p2	BC021785|BC021785|215928|cDNA sequence BC021785	BC147384|BC021785|215928|cDNA sequence BC021785	BC147385|BC021785|215928|cDNA sequence BC021785	AK165453|BC021785|215928|cDNA sequence BC021785	AK165493|BC021785|215928|cDNA sequence BC021785	AK085266|BC021785|215928|cDNA sequence BC021785	NM_001001489|BC021785|215928|cDNA sequence BC021785	NM_001113385|BC021785|215928|cDNA sequence BC021785	NM_001113388|BC021785|215928|cDNA sequence BC021785
mm9_v1_chr2_+_142904128_142904227	0.408307	RUNX1..3.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr6_+_87680862_87680866	0.407891	RUNX1..3.p2	AB041550|Ccdc48|58229|coiled-coil domain containing 48	NM_001159697|Ccdc48|58229|coiled-coil domain containing 48	BC139438|Ccdc48|58229|coiled-coil domain containing 48	BC139439|Ccdc48|58229|coiled-coil domain containing 48
mm9_v1_chr4_-_45333366_45333502	0.407556	RUNX1..3.p2	AK006281|Exosc3|66362|exosome component 3	BC023669|Exosc3|66362|exosome component 3	BC054085|Exosc3|66362|exosome component 3	NM_025513|Exosc3|66362|exosome component 3	AK012689|Exosc3|66362|exosome component 3
mm9_v1_chrX_-_151524332_151524332	0.405085	RUNX1..3.p2	BC116904|Magea1|17137|melanoma antigen, family A, 1	NM_020015|Magea1|17137|melanoma antigen, family A, 1
mm9_v1_chr8_+_119984482_119984512	0.403448	RUNX1..3.p2	AK020023|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr12_-_79944026_79944112	0.402713	RUNX1..3.p2	
mm9_v1_chr11_-_77421308_77421363	0.402473	RUNX1..3.p2	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr4_-_115726385_115726456	0.401883	RUNX1..3.p2	BC024628|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr1_+_95700522_95700570	0.40039	RUNX1..3.p2	AK028397|Ing5|66262|inhibitor of growth family, member 5	NM_025454|Ing5|66262|inhibitor of growth family, member 5	AK007536|Ing5|66262|inhibitor of growth family, member 5	BC064674|Ing5|66262|inhibitor of growth family, member 5	AK009312|Ing5|66262|inhibitor of growth family, member 5	AK028010|Ing5|66262|inhibitor of growth family, member 5	AK145695|Ing5|66262|inhibitor of growth family, member 5
mm9_v1_chr8_+_108939222_108939238	0.399426	RUNX1..3.p2	AK032286|Zfp90|22751|zinc finger protein 90	AK154205|Zfp90|22751|zinc finger protein 90	NM_011764|Zfp90|22751|zinc finger protein 90
mm9_v1_chr17_-_24388262_24388385	0.398001	RUNX1..3.p2	BC021658|Ccnf|12449|cyclin F	Z47766|Ccnf|12449|cyclin F	U20612|Ccnf|12449|cyclin F	U20636|Ccnf|12449|cyclin F	AK085183|Ccnf|12449|cyclin F	AK030298|Ccnf|12449|cyclin F	AK031613|Ccnf|12449|cyclin F	AK032961|Ccnf|12449|cyclin F	AK162447|Ccnf|12449|cyclin F	AK169263|Ccnf|12449|cyclin F	AK082485|Ccnf|12449|cyclin F	AK159594|Ccnf|12449|cyclin F	NM_007634|Ccnf|12449|cyclin F
mm9_v1_chr4_+_59818711_59818767	0.397564	RUNX1..3.p2	AK165619|Snx30|209131|sorting nexin family member 30	AK029012|Snx30|209131|sorting nexin family member 30	AK170999|Snx30|209131|sorting nexin family member 30	BC099674|Snx30|209131|sorting nexin family member 30	AK170774|Snx30|209131|sorting nexin family member 30
mm9_v1_chr10_+_127691166_127691233	0.395302	RUNX1..3.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr6_+_135313056_135313087	0.395128	RUNX1..3.p2	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr10_+_93610663_93610767	0.394176	RUNX1..3.p2	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr7_-_133974985_133975009	0.392312	RUNX1..3.p2	AK019625|4930451I11Rik|78118|RIKEN cDNA 4930451I11 gene	BC048622|4930451I11Rik|78118|RIKEN cDNA 4930451I11 gene	NM_183131|4930451I11Rik|78118|RIKEN cDNA 4930451I11 gene
mm9_v1_chr4_+_147242922_147243087	0.392297	RUNX1..3.p2	NM_010244|Fv1|14349|Friend virus susceptibility 1
mm9_v1_chr7_+_112885103_112885239	0.391679	RUNX1..3.p2	NM_001161724|Ilk|16202|integrin linked kinase	AK011766|Ilk|16202|integrin linked kinase	AK154207|Ilk|16202|integrin linked kinase	AK002344|Ilk|16202|integrin linked kinase	NM_010562|Ilk|16202|integrin linked kinase
mm9_v1_chr5_-_121952988_121953080	0.391365	RUNX1..3.p2	NM_172125|Adam1b|280667|a disintegrin and metallopeptidase domain 1b	BC140979|Adam1b|280667|a disintegrin and metallopeptidase domain 1b
mm9_v1_chr2_+_172266042_172266209	0.390859	RUNX1..3.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr11_-_100334076_100334121	0.388035	RUNX1..3.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr14_+_63761507_63761880	0.388029	RUNX1..3.p2	AK201025|Ctsb|13030|cathepsin B	AK201162|Ctsb|13030|cathepsin B	AF062526|Ctsb|13030|cathepsin B
mm9_v1_chr2_-_152422160_152422220	0.387314	RUNX1..3.p2	BC132226|Defb45|433490|defensin beta 45	BC132228|Defb45|433490|defensin beta 45	AY591384|Defb45|433490|defensin beta 45	DQ012038|Defb45|433490|defensin beta 45	AK005919|Defb45|433490|defensin beta 45	NM_001037752|Defb45|433490|defensin beta 45
mm9_v1_chr17_-_37118161_37118181	0.385363	RUNX1..3.p2	BC147446|2410137M14Rik|76797|RIKEN cDNA 2410137M14 gene	BC147465|2410137M14Rik|76797|RIKEN cDNA 2410137M14 gene	BC171992|2410137M14Rik|76797|RIKEN cDNA 2410137M14 gene	AK010800|2410137M14Rik|76797|RIKEN cDNA 2410137M14 gene	NM_029747|2410137M14Rik|76797|RIKEN cDNA 2410137M14 gene
mm9_v1_chr12_+_52449216_52449372	0.384252	RUNX1..3.p2	NM_001015099|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167963|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167964|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK033513|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK129332|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	BC086455|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK084256|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK031333|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase
mm9_v1_chr4_+_130219299_130219334	0.384069	RUNX1..3.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr1_+_168309525_168309532	0.3811	RUNX1..3.p2	AK013599|Tada1|27878|transcriptional adaptor 1
mm9_v1_chr11_-_68635236_68635451	0.380639	RUNX1..3.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr8_-_25686797_25686823	0.380186	RUNX1..3.p2	BC026393|Ido2|209176|indoleamine 2,3-dioxygenase 2	EF137182|Ido2|209176|indoleamine 2,3-dioxygenase 2	NM_145949|Ido2|209176|indoleamine 2,3-dioxygenase 2
mm9_v1_chr10_-_23506981_23507073	0.379208	RUNX1..3.p2	BC090257|Rps12|20042|ribosomal protein S12	BC089339|Rps12|20042|ribosomal protein S12	BC092044|Rps12|20042|ribosomal protein S12	BC002079|Rps12|20042|ribosomal protein S12	BC099377|Rps12|20042|ribosomal protein S12	BC089338|Rps12|20042|ribosomal protein S12	AK132208|Rps12|20042|ribosomal protein S12	AK166923|Rps12|20042|ribosomal protein S12	AK166992|Rps12|20042|ribosomal protein S12	BC096653|Rps12|20042|ribosomal protein S12	AK002848|Rps12|20042|ribosomal protein S12	AK008057|Rps12|20042|ribosomal protein S12	AK032757|Rps12|20042|ribosomal protein S12	AK168324|Rps12|20042|ribosomal protein S12	AK169215|Rps12|20042|ribosomal protein S12	NM_011295|Rps12|20042|ribosomal protein S12
mm9_v1_chr2_+_153700780_153700825	0.377863	RUNX1..3.p2	AK010157|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	NM_025631|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009504|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028158|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009346|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009619|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009871|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009794|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010120|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010154|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010215|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028156|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK075874|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK160516|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009776|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010130|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116681|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116727|Bpil1|66557|bactericidal/permeability-increasing protein-like 1
mm9_v1_chr1_-_180259336_180259529	0.376471	RUNX1..3.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr3_+_30754871_30754936	0.375618	RUNX1..3.p2	AK154620|Gpr160|71862|G protein-coupled receptor 160	AK158013|Gpr160|71862|G protein-coupled receptor 160	NM_001134385|Gpr160|71862|G protein-coupled receptor 160	NM_001134386|Gpr160|71862|G protein-coupled receptor 160	NM_027965|Gpr160|71862|G protein-coupled receptor 160	AK006330|Gpr160|71862|G protein-coupled receptor 160	AK154784|Gpr160|71862|G protein-coupled receptor 160	BC116649|Gpr160|71862|G protein-coupled receptor 160
mm9_v1_chr6_+_133242233_133242233	0.375008	RUNX1..3.p2	AK017421|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene	NM_027784|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene
mm9_v1_chr1_+_89223558_89223642	0.374904	RUNX1..3.p2	NM_146112|Gigyf2|227331|GRB10 interacting GYF protein 2	AK079246|Gigyf2|227331|GRB10 interacting GYF protein 2	NM_001110212|Gigyf2|227331|GRB10 interacting GYF protein 2	AK011414|Gigyf2|227331|GRB10 interacting GYF protein 2	AK034426|Gigyf2|227331|GRB10 interacting GYF protein 2	AK160878|Gigyf2|227331|GRB10 interacting GYF protein 2	AK144058|Gigyf2|227331|GRB10 interacting GYF protein 2	BC089036|Gigyf2|227331|GRB10 interacting GYF protein 2	BC006835|Gigyf2|227331|GRB10 interacting GYF protein 2	BC076610|Gigyf2|227331|GRB10 interacting GYF protein 2	AY176043|Gigyf2|227331|GRB10 interacting GYF protein 2	AK137375|Gigyf2|227331|GRB10 interacting GYF protein 2
mm9_v1_chr2_+_131387349_131387488	0.37363	RUNX1..3.p2	
mm9_v1_chr2_+_91050920_91051054	0.371434	RUNX1..3.p2	AK080581|Acp2|11432|acid phosphatase 2, lysosomal
mm9_v1_chr17_+_25445590_25445590	0.370685	RUNX1..3.p2	AK144498|Prss28|114661|protease, serine, 28	NM_053259|Prss28|114661|protease, serine, 28
mm9_v1_chr11_-_43650152_43650304	0.370258	RUNX1..3.p2	Y12738|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr17_-_35164860_35164960	0.368815	RUNX1..3.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr10_-_117147722_117147744	0.368441	RUNX1..3.p2	X58876|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC050902|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004881|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK088638|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr6_-_52108249_52108315	0.367757	RUNX1..3.p2	BC138097|Hoxa1|15394|homeobox A1	BC138098|Hoxa1|15394|homeobox A1	M22115|Hoxa1|15394|homeobox A1	AK143943|Hoxa1|15394|homeobox A1	AK083575|Hoxa1|15394|homeobox A1	NM_010449|Hoxa1|15394|homeobox A1
mm9_v1_chr11_-_78235686_78235735	0.36716	RUNX1..3.p2	AF201903|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	NM_022411|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	BC013493|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	AK140972|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
mm9_v1_chr11_-_77979070_77979090	0.359354	RUNX1..3.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr7_+_114240980_114240980	0.358574	RUNX1..3.p2	BC139721|Olfr17|18314|olfactory receptor 17	BC140168|Olfr17|18314|olfactory receptor 17	BC143142|Olfr17|18314|olfactory receptor 17	BC143195|Olfr17|18314|olfactory receptor 17	NM_020598|Olfr17|18314|olfactory receptor 17
mm9_v1_chr8_+_23057233_23057262	0.358508	RUNX1..3.p2	AJ437649|Defb13|246083|defensin beta 13	NM_139223|Defb13|246083|defensin beta 13	AJ575427|Defb13|246083|defensin beta 13
mm9_v1_chr9_+_66006025_66006053	0.35729	RUNX1..3.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chrX_-_151467834_151467834	0.355722	RUNX1..3.p2	NM_020016|Magea2|17138|melanoma antigen, family A, 2
mm9_v1_chrX_-_151430392_151430392	0.354473	RUNX1..3.p2	AK145480|Magea8|17144|melanoma antigen, family A, 8	NM_020020|Magea8|17144|melanoma antigen, family A, 8
mm9_v1_chr7_+_31278675_31278685	0.350455	RUNX1..3.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr13_-_63532777_63533052	0.349495	RUNX1..3.p2	AK196042|Fancc|14088|Fanconi anemia, complementation group C	AK035488|Fancc|14088|Fanconi anemia, complementation group C	AK042226|Fancc|14088|Fanconi anemia, complementation group C	AK082717|Fancc|14088|Fanconi anemia, complementation group C	AK080697|Fancc|14088|Fanconi anemia, complementation group C	AK147025|Fancc|14088|Fanconi anemia, complementation group C	L08266|Fancc|14088|Fanconi anemia, complementation group C	AK163161|Fancc|14088|Fanconi anemia, complementation group C	NM_001042673|Fancc|14088|Fanconi anemia, complementation group C	NM_007985|Fancc|14088|Fanconi anemia, complementation group C
mm9_v1_chr17_+_47730384_47730630	0.348141	RUNX1..3.p2	AK165191|Ccnd3|12445|cyclin D3	NM_007632|Ccnd3|12445|cyclin D3	AK159503|Ccnd3|12445|cyclin D3	AK168290|Ccnd3|12445|cyclin D3	M86183|Ccnd3|12445|cyclin D3	BC004076|Ccnd3|12445|cyclin D3	BC005605|Ccnd3|12445|cyclin D3
mm9_v1_chr14_-_55560793_55560834	0.346706	RUNX1..3.p2	
mm9_v1_chr3_-_89169160_89169174	0.346664	RUNX1..3.p2	BC125478|Dcst1|77772|DC-STAMP domain containing 1	BC125480|Dcst1|77772|DC-STAMP domain containing 1	NM_029974|Dcst1|77772|DC-STAMP domain containing 1	AK030269|Dcst1|77772|DC-STAMP domain containing 1
mm9_v1_chr11_+_102977638_102977680	0.345428	RUNX1..3.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr7_+_51462804_51462808	0.34248	RUNX1..3.p2	BC034518|Klk1b4|18048|kallikrein 1-related pepidase b4	NM_010915|Klk1b4|18048|kallikrein 1-related pepidase b4	M11434|Klk1b4|18048|kallikrein 1-related pepidase b4
mm9_v1_chr2_-_156439157_156439262	0.342226	RUNX1..3.p2	AK032272|LOC100504350|100504350|hypothetical LOC100504350
mm9_v1_chr2_-_104689616_104690006	0.341466	RUNX1..3.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr15_+_85690375_85690405	0.341368	RUNX1..3.p2	BC027213|Gtse1|29870|G two S phase expressed protein 1	NM_013882|Gtse1|29870|G two S phase expressed protein 1	AJ222580|Gtse1|29870|G two S phase expressed protein 1
mm9_v1_chr12_+_53198729_53198769	0.341188	RUNX1..3.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr11_+_5420920_5421028	0.340206	RUNX1..3.p2	AF027963|Xbp1|22433|X-box binding protein 1	NM_013842|Xbp1|22433|X-box binding protein 1	AK007724|Xbp1|22433|X-box binding protein 1	AK145241|Xbp1|22433|X-box binding protein 1	BC029197|Xbp1|22433|X-box binding protein 1	BC008153|Xbp1|22433|X-box binding protein 1
mm9_v1_chr7_-_26197807_26197904	0.339454	RUNX1..3.p2	AY374329|Cxcl17|232983|chemokine (C-X-C motif) ligand 17	AK143005|Cxcl17|232983|chemokine (C-X-C motif) ligand 17	AY598463|Cxcl17|232983|chemokine (C-X-C motif) ligand 17	BC024561|Cxcl17|232983|chemokine (C-X-C motif) ligand 17	NM_153576|Cxcl17|232983|chemokine (C-X-C motif) ligand 17
mm9_v1_chr5_-_21290925_21290949	0.33764	RUNX1..3.p2	U53208|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161347|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr11_-_101285951_101285970	0.336147	RUNX1..3.p2	BC057970|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	AK004415|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr2_-_66094647_66094696	0.334807	RUNX1..3.p2	BC151199|Ttc21b|73668|tetratricopeptide repeat domain 21B	BC172115|Ttc21b|73668|tetratricopeptide repeat domain 21B	DQ011164|Ttc21b|73668|tetratricopeptide repeat domain 21B	NM_001047604|Ttc21b|73668|tetratricopeptide repeat domain 21B
mm9_v1_chr12_-_30817451_30817473	0.332989	RUNX1..3.p2	AK047843|Tpo|22018|thyroid peroxidase	NM_009417|Tpo|22018|thyroid peroxidase	X60703|Tpo|22018|thyroid peroxidase
mm9_v1_chr10_-_126467848_126467902	0.331389	RUNX1..3.p2	BC034286|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK020437|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK169164|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK018591|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK141183|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK012240|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK171656|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK172112|Tsfm|66399|Ts translation elongation factor, mitochondrial	BC057904|Tsfm|66399|Ts translation elongation factor, mitochondrial	NM_025537|Tsfm|66399|Ts translation elongation factor, mitochondrial
mm9_v1_chr9_+_14305055_14305063	0.331372	RUNX1..3.p2	NM_023153|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr18_+_24796993_24796998	0.33046	RUNX1..3.p2	AK213520|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr18_-_35821788_35821845	0.328604	RUNX1..3.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr4_+_114672722_114672818	0.327625	RUNX1..3.p2	NM_009185|Stil|20460|Scl/Tal1 interrupting locus	BC049865|Stil|20460|Scl/Tal1 interrupting locus	AK049223|Stil|20460|Scl/Tal1 interrupting locus	AK049550|Stil|20460|Scl/Tal1 interrupting locus	BC087545|Stil|20460|Scl/Tal1 interrupting locus	U36778|Stil|20460|Scl/Tal1 interrupting locus	BC060706|Stil|20460|Scl/Tal1 interrupting locus	BC108373|Stil|20460|Scl/Tal1 interrupting locus
mm9_v1_chr9_+_77961044_77961183	0.32526	RUNX1..3.p2	NM_019987|Ick|56542|intestinal cell kinase	AK045950|Ick|56542|intestinal cell kinase	AK164613|Ick|56542|intestinal cell kinase	AK008991|Ick|56542|intestinal cell kinase	AK133537|Ick|56542|intestinal cell kinase	AK087484|Ick|56542|intestinal cell kinase
mm9_v1_chr8_-_23272965_23272967	0.323445	RUNX1..3.p2	NM_001162947|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	AF093416|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr9_+_107809219_107809237	0.322393	RUNX1..3.p2	NM_009074|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	X74736|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	AK053655|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
mm9_v1_chr11_-_115884885_115885030	0.322202	RUNX1..3.p2	
mm9_v1_chr19_+_5366812_5366812	0.321625	RUNX1..3.p2	BC024640|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	NM_027236|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing
mm9_v1_chr4_-_104548965_104549005	0.321027	RUNX1..3.p2	AB077296|C8a|230558|complement component 8, alpha polypeptide	AB077297|C8a|230558|complement component 8, alpha polypeptide	AB077298|C8a|230558|complement component 8, alpha polypeptide	BC027748|C8a|230558|complement component 8, alpha polypeptide	AK090245|C8a|230558|complement component 8, alpha polypeptide	AB077295|C8a|230558|complement component 8, alpha polypeptide	NM_146148|C8a|230558|complement component 8, alpha polypeptide
mm9_v1_chr16_-_94008999_94009081	0.320019	RUNX1..3.p2	BC132183|Cldn14|56173|claudin 14	BC138497|Cldn14|56173|claudin 14	AF314089|Cldn14|56173|claudin 14	NM_019500|Cldn14|56173|claudin 14
mm9_v1_chr2_+_153743965_153743965	0.317628	RUNX1..3.p2	BC048084|Rya3|378700|antimicrobial peptide RYA3	NM_194357|Rya3|378700|antimicrobial peptide RYA3
mm9_v1_chr3_-_92556257_92556262	0.315935	RUNX1..3.p2	AK003795|Lce1g|66195|late cornified envelope 1G	AK004290|Lce1g|66195|late cornified envelope 1G	NM_025413|Lce1g|66195|late cornified envelope 1G
mm9_v1_chr5_-_143665474_143665607	0.310767	RUNX1..3.p2	
mm9_v1_chr1_-_10710010_10710025	0.310232	RUNX1..3.p2	BC119559|Cpa6|329093|carboxypeptidase A6	BC119560|Cpa6|329093|carboxypeptidase A6	AY773477|Cpa6|329093|carboxypeptidase A6	NM_177834|Cpa6|329093|carboxypeptidase A6	AK078883|Cpa6|329093|carboxypeptidase A6
mm9_v1_chr13_-_14155541_14155555	0.309699	RUNX1..3.p2	AB016044|Ggps1|14593|geranylgeranyl diphosphate synthase 1
mm9_v1_chr14_+_32481114_32481230	0.309648	RUNX1..3.p2	AK189055|Btd|26363|biotinidase
mm9_v1_chr3_+_59533707_59533707	0.30942	RUNX1..3.p2	NM_001101531|Gm5538|433597|predicted gene 5538
mm9_v1_chr4_-_99495806_99495876	0.308534	RUNX1..3.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr3_+_51298674_51298675	0.30845	RUNX1..3.p2	AK038231|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr2_-_155127037_155127091	0.307714	RUNX1..3.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr6_+_128921177_128921181	0.307357	RUNX1..3.p2	AY137341|Clec2g|70809|C-type lectin domain family 2, member g	AY137342|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168223|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168224|Clec2g|70809|C-type lectin domain family 2, member g	AK137753|Clec2g|70809|C-type lectin domain family 2, member g
mm9_v1_chr17_-_31414288_31414300	0.306974	RUNX1..3.p2	AB006535|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	BC049584|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	NM_025290|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)
mm9_v1_chr6_-_23198140_23198361	0.305923	RUNX1..3.p2	AK014242|Fezf1|73191|Fez family zinc finger 1	BC119565|Fezf1|73191|Fez family zinc finger 1	BC119566|Fezf1|73191|Fez family zinc finger 1	NM_028462|Fezf1|73191|Fez family zinc finger 1	BC049157|Fezf1|73191|Fez family zinc finger 1
mm9_v1_chr15_-_101770683_101770754	0.305438	RUNX1..3.p2	BC019155|Krt79|223917|keratin 79	BC031593|Krt79|223917|keratin 79	NM_146063|Krt79|223917|keratin 79
mm9_v1_chr18_-_85120825_85120843	0.304282	RUNX1..3.p2	AK168105|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK013281|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr6_-_53928655_53928666	0.303429	RUNX1..3.p2	BC137839|Cpvl|71287|carboxypeptidase, vitellogenic-like	BC144966|Cpvl|71287|carboxypeptidase, vitellogenic-like	NM_027749|Cpvl|71287|carboxypeptidase, vitellogenic-like	AK017087|Cpvl|71287|carboxypeptidase, vitellogenic-like
mm9_v1_chr19_-_7008874_7009004	0.303231	RUNX1..3.p2	BC119784|Kcnk4|16528|potassium channel, subfamily K, member 4	NM_008431|Kcnk4|16528|potassium channel, subfamily K, member 4
mm9_v1_chr10_+_21015762_21015859	0.303159	RUNX1..3.p2	NM_001042593|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_001145209|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_019702|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK006626|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK146678|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK166140|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK168671|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK169281|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK012856|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK173091|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC085235|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC010251|Hbs1l|56422|Hbs1-like (S. cerevisiae)
mm9_v1_chr7_+_134716896_134716950	0.302683	RUNX1..3.p2	AK089062|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	AK005277|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	BC138913|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	BC145734|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)
mm9_v1_chr7_+_134716853_134716888	0.301082	RUNX1..3.p2	AK079680|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	NM_026888|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)
mm9_v1_chr4_-_94269846_94269942	0.299654	RUNX1..3.p2	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr5_-_69933835_69933870	0.297422	RUNX1..3.p2	AK009405|Yipf7|75581|Yip1 domain family, member 7	BC089576|Yipf7|75581|Yip1 domain family, member 7	NM_023784|Yipf7|75581|Yip1 domain family, member 7
mm9_v1_chr15_+_73582101_73582137	0.296046	RUNX1..3.p2	AF035645|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr3_+_87600872_87601015	0.295048	RUNX1..3.p2	AK142578|Insrr|23920|insulin receptor-related receptor	NM_011832|Insrr|23920|insulin receptor-related receptor	AK081512|Insrr|23920|insulin receptor-related receptor	AB007135|Insrr|23920|insulin receptor-related receptor	BC137855|Insrr|23920|insulin receptor-related receptor
mm9_v1_chr3_-_75760691_75760752	0.294161	RUNX1..3.p2	BC086642|Golim4|73124|golgi integral membrane protein 4	BC089354|Golim4|73124|golgi integral membrane protein 4	NM_175193|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr3_-_132613006_132613178	0.291843	RUNX1..3.p2	AF397007|Npnt|114249|nephronectin	AF397008|Npnt|114249|nephronectin	AY035898|Npnt|114249|nephronectin	AY035899|Npnt|114249|nephronectin	BC068308|Npnt|114249|nephronectin	AK050484|Npnt|114249|nephronectin
mm9_v1_chr2_+_120435110_120435179	0.291798	RUNX1..3.p2	AK012086|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012779|Haus2|66296|HAUS augmin-like complex, subunit 2	AK132300|Haus2|66296|HAUS augmin-like complex, subunit 2	AK010445|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012960|Haus2|66296|HAUS augmin-like complex, subunit 2	NM_025475|Haus2|66296|HAUS augmin-like complex, subunit 2	BC086677|Haus2|66296|HAUS augmin-like complex, subunit 2
mm9_v1_chr14_+_119537486_119537562	0.285288	RUNX1..3.p2	NM_015820|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	AB024567|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC117529|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC118035|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3
mm9_v1_chr14_-_27489119_27489164	0.280199	RUNX1..3.p2	AK167708|Pde12|211948|phosphodiesterase 12	AK088843|Pde12|211948|phosphodiesterase 12	AK143567|Pde12|211948|phosphodiesterase 12	AK082947|Pde12|211948|phosphodiesterase 12	AK155088|Pde12|211948|phosphodiesterase 12
mm9_v1_chr3_+_94641479_94641499	0.279103	RUNX1..3.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr7_-_106632113_106632218	0.276238	RUNX1..3.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr3_-_90269648_90269831	0.276107	RUNX1..3.p2	BC139767|Npr1|18160|natriuretic peptide receptor 1	BC110659|Npr1|18160|natriuretic peptide receptor 1	NM_008727|Npr1|18160|natriuretic peptide receptor 1
mm9_v1_chr2_-_19475523_19475540	0.274128	RUNX1..3.p2	BC132142|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	BC137968|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK014808|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	NM_027600|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK014944|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene	AK033749|4921504E06Rik|70909|RIKEN cDNA 4921504E06 gene
mm9_v1_chr1_+_75447084_75447084	0.269588	RUNX1..3.p2	NM_183022|Accn4|241118|amiloride-sensitive cation channel 4, pituitary
mm9_v1_chrX_-_7769960_7770036	0.268734	RUNX1..3.p2	AK008113|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	AK027977|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	X97755|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	BC004620|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	AK012266|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm9_v1_chr16_-_57754816_57754849	0.263233	RUNX1..3.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr6_+_110595574_110595583	0.26197	RUNX1..3.p2	AK053447|Grm7|108073|glutamate receptor, metabotropic 7	AK047160|Grm7|108073|glutamate receptor, metabotropic 7	AK047733|Grm7|108073|glutamate receptor, metabotropic 7
mm9_v1_chrX_+_72759635_72759692	0.26146	RUNX1..3.p2	NM_011692|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167742|Vbp1|22327|von Hippel-Lindau binding protein 1	AK077923|Vbp1|22327|von Hippel-Lindau binding protein 1	AK002282|Vbp1|22327|von Hippel-Lindau binding protein 1	AK008847|Vbp1|22327|von Hippel-Lindau binding protein 1	AK051431|Vbp1|22327|von Hippel-Lindau binding protein 1	AK151527|Vbp1|22327|von Hippel-Lindau binding protein 1	AK159284|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167064|Vbp1|22327|von Hippel-Lindau binding protein 1	AK169185|Vbp1|22327|von Hippel-Lindau binding protein 1	AK153069|Vbp1|22327|von Hippel-Lindau binding protein 1	U96760|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132169|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132171|Vbp1|22327|von Hippel-Lindau binding protein 1
mm9_v1_chr5_+_122822505_122822541	0.26129	RUNX1..3.p2	BC003341|Gpn3|68080|GPN-loop GTPase 3	NM_024216|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr7_-_105805050_105805106	0.259175	RUNX1..3.p2	BC066050|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC039956|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC089304|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	NM_172280|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	AK032985|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene
mm9_v1_chr19_-_9162377_9162448	0.2591	RUNX1..3.p2	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr17_+_27993426_27993458	0.256145	RUNX1..3.p2	AK089790|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK144200|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK220293|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	NM_001080769|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1
mm9_v1_chr17_-_80879792_80879792	0.256051	RUNX1..3.p2	AK140310|Sos1|20662|son of sevenless homolog 1 (Drosophila)	NM_009231|Sos1|20662|son of sevenless homolog 1 (Drosophila)
mm9_v1_chr7_-_139768035_139768106	0.254237	RUNX1..3.p2	AK128914|Oat|18242|ornithine aminotransferase	AK145877|Oat|18242|ornithine aminotransferase	NM_016978|Oat|18242|ornithine aminotransferase
mm9_v1_chr16_-_18248701_18248813	0.253357	RUNX1..3.p2	AK008276|Ranbp1|19385|RAN binding protein 1	AK002989|Ranbp1|19385|RAN binding protein 1	AK151167|Ranbp1|19385|RAN binding protein 1	AK153074|Ranbp1|19385|RAN binding protein 1	AK167053|Ranbp1|19385|RAN binding protein 1	AK088781|Ranbp1|19385|RAN binding protein 1	AK166642|Ranbp1|19385|RAN binding protein 1	NM_011239|Ranbp1|19385|RAN binding protein 1	X56045|Ranbp1|19385|RAN binding protein 1	X56046|Ranbp1|19385|RAN binding protein 1	BC061140|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr2_-_164682380_164682513	0.253171	RUNX1..3.p2	CT010317|Pltp|18830|phospholipid transfer protein	U28960|Pltp|18830|phospholipid transfer protein
mm9_v1_chr2_+_152398479_152398479	0.252769	RUNX1..3.p2	AK076875|Defb21|403172|defensin beta 21	DQ012032|Defb21|403172|defensin beta 21	NM_207276|Defb21|403172|defensin beta 21
mm9_v1_chr9_+_107982741_107982829	0.252094	RUNX1..3.p2	NM_008243|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	BC010551|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK040934|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK134222|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	BC051393|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK144824|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	M74181|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)
mm9_v1_chr1_+_137949360_137949540	0.251844	RUNX1..3.p2	L06234|Cacna1s|12292|calcium channel, voltage-dependent, L type, alpha 1S subunit	BC134369|Cacna1s|12292|calcium channel, voltage-dependent, L type, alpha 1S subunit	NM_001081023|Cacna1s|12292|calcium channel, voltage-dependent, L type, alpha 1S subunit	NM_014193|Cacna1s|12292|calcium channel, voltage-dependent, L type, alpha 1S subunit	AK143541|Cacna1s|12292|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm9_v1_chr17_+_46384981_46385245	0.251343	RUNX1..3.p2	NM_145353|Yipf3|28064|Yip1 domain family, member 3	AK011822|Yipf3|28064|Yip1 domain family, member 3	BC019384|Yipf3|28064|Yip1 domain family, member 3	BC011161|Yipf3|28064|Yip1 domain family, member 3	BC100575|Yipf3|28064|Yip1 domain family, member 3	AK149957|Yipf3|28064|Yip1 domain family, member 3	AK183797|Yipf3|28064|Yip1 domain family, member 3
mm9_v1_chr4_-_109125244_109125254	0.247108	RUNX1..3.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr18_+_75169426_75169445	0.24676	RUNX1..3.p2	
mm9_v1_chr1_-_174825067_174825072	0.24522	RUNX1..3.p2	AK144248|Apcs|20219|serum amyloid P-component	AK165699|Apcs|20219|serum amyloid P-component
mm9_v1_chr2_+_180663727_180663803	0.24419	RUNX1..3.p2	AK053463|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	NM_001163247|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	BC107260|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	BC125013|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)
mm9_v1_chr16_+_13672078_13672141	0.242874	RUNX1..3.p2	AK031567|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK013874|Bfar|67118|bifunctional apoptosis regulator	BC027221|Bfar|67118|bifunctional apoptosis regulator	AK012939|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK028592|Bfar|67118|bifunctional apoptosis regulator	NM_025653|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene
mm9_v1_chr7_+_13615892_13615926	0.241822	RUNX1..3.p2	AK193916|Trim28|21849|tripartite motif-containing 28	AK194102|Trim28|21849|tripartite motif-containing 28	AK190398|Trim28|21849|tripartite motif-containing 28	AK177374|Trim28|21849|tripartite motif-containing 28	AK189444|Trim28|21849|tripartite motif-containing 28	AK190056|Trim28|21849|tripartite motif-containing 28	AK190280|Trim28|21849|tripartite motif-containing 28	AK192048|Trim28|21849|tripartite motif-containing 28	AK196455|Trim28|21849|tripartite motif-containing 28	AK196856|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr10_-_128002991_128003052	0.241611	RUNX1..3.p2	AK166936|Pa2g4|18813|proliferation-associated 2G4	X84789|Pa2g4|18813|proliferation-associated 2G4	AK144645|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr6_-_130336891_130336991	0.240269	RUNX1..3.p2	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr2_-_91019477_91019477	0.239903	RUNX1..3.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr14_+_56194510_56194513	0.239549	RUNX1..3.p2	AB054000|Fitm1|68680|fat storage-inducing transmembrane protein 1	BC104408|Fitm1|68680|fat storage-inducing transmembrane protein 1	BC104409|Fitm1|68680|fat storage-inducing transmembrane protein 1	NM_026808|Fitm1|68680|fat storage-inducing transmembrane protein 1	BC037188|Fitm1|68680|fat storage-inducing transmembrane protein 1
mm9_v1_chr17_+_30272123_30272409	0.239387	RUNX1..3.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr8_+_38056628_38056675	0.238906	RUNX1..3.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chrX_+_17722982_17722995	0.238523	RUNX1..3.p2	AK007061|Dusp21|73547|dual specificity phosphatase 21	BC048605|Dusp21|73547|dual specificity phosphatase 21	NM_028568|Dusp21|73547|dual specificity phosphatase 21
mm9_v1_chr3_-_115417932_115417972	0.238487	RUNX1..3.p2	AK004591|S1pr1|13609|sphingosine-1-phosphate receptor 1	NM_007901|S1pr1|13609|sphingosine-1-phosphate receptor 1
mm9_v1_chr1_-_34496516_34496516	0.23789	RUNX1..3.p2	BC019430|Ccdc115|69668|coiled-coil domain containing 115	NM_027159|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr5_+_28643698_28643741	0.236876	RUNX1..3.p2	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr1_+_61685397_61685574	0.236174	RUNX1..3.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr7_-_139767997_139768034	0.235864	RUNX1..3.p2	BC008119|Oat|18242|ornithine aminotransferase	AK146413|Oat|18242|ornithine aminotransferase	AK168851|Oat|18242|ornithine aminotransferase
mm9_v1_chr10_+_82822948_82823029	0.235564	RUNX1..3.p2	NM_026579|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK128995|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK049544|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK160350|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK147063|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK020067|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK162255|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC050904|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC094241|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC035946|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed
mm9_v1_chr4_+_132925684_132925804	0.235114	RUNX1..3.p2	AK150135|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	AK165501|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	NM_016981|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	BC052708|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm9_v1_chr3_+_96963195_96963222	0.233874	RUNX1..3.p2	AF216223|Acp6|66659|acid phosphatase 6, lysophosphatidic
mm9_v1_chr5_+_122822549_122822598	0.229861	RUNX1..3.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr2_-_53937785_53937964	0.229428	RUNX1..3.p2	BC030065|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK014769|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AB043586|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK010465|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	NM_023396|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate
mm9_v1_chr9_-_109986879_109987026	0.229323	RUNX1..3.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr11_+_93747419_93747532	0.228295	RUNX1..3.p2	AK153919|Mbtd1|103537|mbt domain containing 1	BC064014|Mbtd1|103537|mbt domain containing 1	BC062907|Mbtd1|103537|mbt domain containing 1	NM_134012|Mbtd1|103537|mbt domain containing 1
mm9_v1_chr11_+_68970595_68970695	0.224702	RUNX1..3.p2	BC113149|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type	AF059251|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type
mm9_v1_chr10_+_80289428_80289498	0.224668	RUNX1..3.p2	AK160491|Oaz1|18245|ornithine decarboxylase antizyme 1	AK003452|Oaz1|18245|ornithine decarboxylase antizyme 1	AK010615|Oaz1|18245|ornithine decarboxylase antizyme 1	AK019155|Oaz1|18245|ornithine decarboxylase antizyme 1	AK146571|Oaz1|18245|ornithine decarboxylase antizyme 1	AK147167|Oaz1|18245|ornithine decarboxylase antizyme 1	AK151635|Oaz1|18245|ornithine decarboxylase antizyme 1	AK159849|Oaz1|18245|ornithine decarboxylase antizyme 1	AK159874|Oaz1|18245|ornithine decarboxylase antizyme 1	AK160598|Oaz1|18245|ornithine decarboxylase antizyme 1	AK169201|Oaz1|18245|ornithine decarboxylase antizyme 1	BC046290|Oaz1|18245|ornithine decarboxylase antizyme 1	BC024902|Oaz1|18245|ornithine decarboxylase antizyme 1	BC094287|Oaz1|18245|ornithine decarboxylase antizyme 1	BC060035|Oaz1|18245|ornithine decarboxylase antizyme 1	BC002132|Oaz1|18245|ornithine decarboxylase antizyme 1	BC091773|Oaz1|18245|ornithine decarboxylase antizyme 1	U52822|Oaz1|18245|ornithine decarboxylase antizyme 1
mm9_v1_chr16_+_13671936_13672057	0.222339	RUNX1..3.p2	NM_001177552|Bfar|67118|bifunctional apoptosis regulator	NM_025976|Bfar|67118|bifunctional apoptosis regulator	AK013950|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK041839|Bfar|67118|bifunctional apoptosis regulator
mm9_v1_chr16_+_94914273_94914275	0.221397	RUNX1..3.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr1_-_174825081_174825085	0.221275	RUNX1..3.p2	BC061125|Apcs|20219|serum amyloid P-component
mm9_v1_chr12_-_92622769_92622848	0.218728	RUNX1..3.p2	BC079647|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054363|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK017333|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK033284|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054164|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK029215|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	BC076614|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	NM_181815|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene
mm9_v1_chr9_-_42280256_42280323	0.218387	RUNX1..3.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr7_-_29551532_29551548	0.217938	RUNX1..3.p2	AY176059|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK038631|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	NM_010908|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr11_+_101177524_101177765	0.2129	RUNX1..3.p2	AK140597|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK150939|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK171348|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	NM_011192|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC015255|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK156079|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC139818|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	D87911|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK178475|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK179381|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK180194|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	CT010198|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	U60330|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3
mm9_v1_chr10_-_80630456_80630508	0.212621	RUNX1..3.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr6_-_100621086_100621167	0.212578	RUNX1..3.p2	BC052657|Shq1|72171|SHQ1 homolog (S. cerevisiae)	AK012978|Shq1|72171|SHQ1 homolog (S. cerevisiae)	NM_181590|Shq1|72171|SHQ1 homolog (S. cerevisiae)
mm9_v1_chr16_-_89818596_89818596	0.211345	RUNX1..3.p2	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr15_-_36094462_36094638	0.210749	RUNX1..3.p2	AK030012|Fbxo43|78803|F-box protein 43	AK019714|Fbxo43|78803|F-box protein 43	BC098484|Fbxo43|78803|F-box protein 43	NM_001081253|Fbxo43|78803|F-box protein 43
mm9_v1_chr11_-_51449228_51449289	0.210728	RUNX1..3.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr11_+_102006884_102006900	0.207246	RUNX1..3.p2	AJ489814|Nags|217214|N-acetylglutamate synthase	NM_145829|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr3_+_88420058_88420079	0.206474	RUNX1..3.p2	AK158232|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr5_-_137358976_137359001	0.205853	RUNX1..3.p2	AJ416092|Emid2|140709|EMI domain containing 2	NM_024474|Emid2|140709|EMI domain containing 2	BC075713|Emid2|140709|EMI domain containing 2	AK076445|Emid2|140709|EMI domain containing 2	AK133882|Emid2|140709|EMI domain containing 2
mm9_v1_chr10_-_80630518_80630667	0.205675	RUNX1..3.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr10_+_79588149_79588215	0.205519	RUNX1..3.p2	AK004499|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr6_+_123122910_123123040	0.204119	RUNX1..3.p2	AK156711|Clec4b2|381809|C-type lectin domain family 4, member b2	AY365133|Clec4b2|381809|C-type lectin domain family 4, member b2	NM_001004159|Clec4b2|381809|C-type lectin domain family 4, member b2
mm9_v1_chr3_+_142428186_142428231	0.202857	RUNX1..3.p2	AK146223|Gtf2b|229906|general transcription factor IIB	AK131856|Gtf2b|229906|general transcription factor IIB	AK133097|Gtf2b|229906|general transcription factor IIB	AK133825|Gtf2b|229906|general transcription factor IIB	AK143935|Gtf2b|229906|general transcription factor IIB	AK145403|Gtf2b|229906|general transcription factor IIB	AK146666|Gtf2b|229906|general transcription factor IIB	AK146910|Gtf2b|229906|general transcription factor IIB	AK151577|Gtf2b|229906|general transcription factor IIB	BC016637|Gtf2b|229906|general transcription factor IIB	NM_145546|Gtf2b|229906|general transcription factor IIB
mm9_v1_chr11_-_97643570_97643598	0.202147	RUNX1..3.p2	AK139855|Rpl23|65019|ribosomal protein L23
mm9_v1_chr7_-_81429262_81429274	0.202025	RUNX1..3.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr9_+_72892697_72892708	0.20199	RUNX1..3.p2	AK010373|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr13_+_14156038_14156092	0.200666	RUNX1..3.p2	AK136105|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK041414|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_194262|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_198122|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK161669|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK031062|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)
mm9_v1_chr5_-_137748860_137748870	0.197757	RUNX1..3.p2	BC066831|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)
mm9_v1_chr11_+_78059210_78059318	0.195744	RUNX1..3.p2	BC058798|Sdf2|20316|stromal cell derived factor 2	NM_009143|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr7_+_20101391_20101436	0.194388	RUNX1..3.p2	
mm9_v1_chr7_-_111001598_111001720	0.193521	RUNX1..3.p2	V00857|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	M26897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	BC057014|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK011619|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012501|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	NM_008221|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain
mm9_v1_chr13_+_94827750_94827786	0.193336	RUNX1..3.p2	AK087506|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	NM_172589|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK031635|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK054342|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2
mm9_v1_chr14_+_44534733_44534733	0.193086	RUNX1..3.p2	NM_001123394|Ang3|11730|angiogenin, ribonuclease A family, member 3	NM_007448|Ang5|503844|angiogenin, ribonuclease A family, member 5	U72672|Ang3|11730|angiogenin, ribonuclease A family, member 3
mm9_v1_chr9_+_123836859_123837183	0.193028	RUNX1..3.p2	NM_009878|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK132906|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK144737|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U19597|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	BC013898|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U20497|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK140808|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm9_v1_chr8_+_27268640_27268693	0.191686	RUNX1..3.p2	NM_199042|Thap1|73754|THAP domain containing, apoptosis associated protein 1	BC038639|Thap1|73754|THAP domain containing, apoptosis associated protein 1
mm9_v1_chr2_-_152656236_152656402	0.188658	RUNX1..3.p2	L35049|Bcl2l1|12048|BCL2-like 1	U51279|Bcl2l1|12048|BCL2-like 1	AK172250|Bcl2l1|12048|BCL2-like 1	U51277|Bcl2l1|12048|BCL2-like 1	AK146461|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr1_+_58267240_58267313	0.188099	RUNX1..3.p2	AK158427|Aox4|71872|aldehyde oxidase 4	NM_023631|Aox4|71872|aldehyde oxidase 4	AK160953|Aox4|71872|aldehyde oxidase 4	AK081746|Aox4|71872|aldehyde oxidase 4	AF233581|Aox4|71872|aldehyde oxidase 4	BC117975|Aox4|71872|aldehyde oxidase 4	BC117976|Aox4|71872|aldehyde oxidase 4
mm9_v1_chr2_-_105239368_105239475	0.186592	RUNX1..3.p2	BC049108|Rcn1|19672|reticulocalbin 1	AK159973|Rcn1|19672|reticulocalbin 1	AK017494|Rcn1|19672|reticulocalbin 1	D13003|Rcn1|19672|reticulocalbin 1	AK133971|Rcn1|19672|reticulocalbin 1	NM_009037|Rcn1|19672|reticulocalbin 1
mm9_v1_chr10_-_13272899_13272947	0.185352	RUNX1..3.p2	BC037606|Pex3|56535|peroxisomal biogenesis factor 3	AK005315|Pex3|56535|peroxisomal biogenesis factor 3	AK012827|Pex3|56535|peroxisomal biogenesis factor 3	AK146934|Pex3|56535|peroxisomal biogenesis factor 3	NM_001164195|Pex3|56535|peroxisomal biogenesis factor 3	NM_019961|Pex3|56535|peroxisomal biogenesis factor 3
mm9_v1_chr6_-_72908741_72908741	0.184378	RUNX1..3.p2	NM_001190327|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr3_-_75760820_75760839	0.184204	RUNX1..3.p2	AK149286|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr4_-_63156099_63156155	0.183952	RUNX1..3.p2	AK122523|Whrn|73750|whirlin
mm9_v1_chr5_+_88408469_88408475	0.183247	RUNX1..3.p2	AK016441|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	AK076636|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	BC049750|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene	NM_027631|4931407G18Rik|70977|RIKEN cDNA 4931407G18 gene
mm9_v1_chr1_-_52874276_52874420	0.182375	RUNX1..3.p2	BC025072|Inpp1|16329|inositol polyphosphate-1-phosphatase	U27295|Inpp1|16329|inositol polyphosphate-1-phosphatase	AK078382|Inpp1|16329|inositol polyphosphate-1-phosphatase
mm9_v1_chr7_-_133618335_133618666	0.18143	RUNX1..3.p2	AF020526|Sh2b1|20399|SH2B adaptor protein 1	AF380422|Sh2b1|20399|SH2B adaptor protein 1	AF421138|Sh2b1|20399|SH2B adaptor protein 1	AF421139|Sh2b1|20399|SH2B adaptor protein 1	BC051978|Sh2b1|20399|SH2B adaptor protein 1	AK154655|Sh2b1|20399|SH2B adaptor protein 1	AK148085|Sh2b1|20399|SH2B adaptor protein 1	AK168439|Sh2b1|20399|SH2B adaptor protein 1	AK170444|Sh2b1|20399|SH2B adaptor protein 1	AK171328|Sh2b1|20399|SH2B adaptor protein 1	NM_001081459|Sh2b1|20399|SH2B adaptor protein 1	NM_011363|Sh2b1|20399|SH2B adaptor protein 1
mm9_v1_chr11_+_74644411_74644428	0.181359	RUNX1..3.p2	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr15_+_33012913_33012952	0.180567	RUNX1..3.p2	AF107835|Pgcp|54381|plasma glutamate carboxypeptidase	AK011656|Pgcp|54381|plasma glutamate carboxypeptidase	AK075686|Pgcp|54381|plasma glutamate carboxypeptidase
mm9_v1_chr6_-_124729735_124729744	0.1804	RUNX1..3.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chr11_+_102006847_102006873	0.180065	RUNX1..3.p2	BC057990|Nags|217214|N-acetylglutamate synthase	AF462069|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr3_+_89518943_89518994	0.179602	RUNX1..3.p2	NM_001038587|Adar|56417|adenosine deaminase, RNA-specific	AK147614|Adar|56417|adenosine deaminase, RNA-specific	AK076413|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr9_-_61918412_61918412	0.179236	RUNX1..3.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr4_-_40704878_40704878	0.177518	RUNX1..3.p2	BC057446|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm9_v1_chr11_+_68913653_68913659	0.177012	RUNX1..3.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr11_-_108204983_108205101	0.176248	RUNX1..3.p2	BC096493|Prkca|18750|protein kinase C, alpha
mm9_v1_chr17_-_24092237_24092240	0.176121	RUNX1..3.p2	BC089471|Sbpl|638345|spermine binding protein-like	AK009761|Sbpl|638345|spermine binding protein-like	NM_001077421|Sbpl|638345|spermine binding protein-like	AK009712|Sbpl|638345|spermine binding protein-like
mm9_v1_chr7_+_138317915_138317916	0.175585	RUNX1..3.p2	AK035662|5430419D17Rik|71395|RIKEN cDNA 5430419D17 gene	NM_175166|5430419D17Rik|71395|RIKEN cDNA 5430419D17 gene
mm9_v1_chr10_+_80289364_80289423	0.175023	RUNX1..3.p2	NM_008753|Oaz1|18245|ornithine decarboxylase antizyme 1
mm9_v1_chr11_+_67779978_67779989	0.174482	RUNX1..3.p2	AK035105|Stx8|55943|syntaxin 8	BC048167|Stx8|55943|syntaxin 8	NM_018768|Stx8|55943|syntaxin 8	BC038186|Stx8|55943|syntaxin 8	AF093064|Stx8|55943|syntaxin 8	AB040054|Stx8|55943|syntaxin 8
mm9_v1_chr1_-_163089444_163089444	0.174265	RUNX1..3.p2	AK015528|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene	NM_001195189|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene
mm9_v1_chrX_-_16896428_16896493	0.173798	RUNX1..3.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr18_+_39933150_39933172	0.173384	RUNX1..3.p2	AK077154|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	NM_011033|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	BC051134|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	AK131715|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	X75959|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2
mm9_v1_chr12_-_70458116_70458130	0.173297	RUNX1..3.p2	BC037106|Nemf|66244|nuclear export mediator factor	AK039497|Nemf|66244|nuclear export mediator factor
mm9_v1_chr12_+_111805938_111806039	0.172357	RUNX1..3.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr2_+_152987036_152987075	0.170291	RUNX1..3.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr16_-_13668230_13668281	0.170256	RUNX1..3.p2	AK041044|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK160611|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	BC021899|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK049829|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK045181|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK004572|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	NM_028761|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)
mm9_v1_chr8_+_73895221_73895251	0.170234	RUNX1..3.p2	AK155219|Ocel1|77090|occludin/ELL domain containing 1	AK143433|Ocel1|77090|occludin/ELL domain containing 1	BC019407|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr15_-_76180500_76180651	0.169162	RUNX1..3.p2	AK178398|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chrX_+_115540835_115540926	0.167502	RUNX1..3.p2	AK132935|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	NM_001142750|Tgif2lx2|100039551|TGFB-induced factor homeobox 2-like, X-linked 2	AF434662|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	NM_153109|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	BC111833|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1
mm9_v1_chr14_-_121904465_121904475	0.166854	RUNX1..3.p2	BC116248|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	BC116249|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	AF205540|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	AK136428|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	NM_053079|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1
mm9_v1_chr15_-_54109855_54110038	0.166675	RUNX1..3.p2	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr11_+_60541880_60542010	0.166491	RUNX1..3.p2	NM_001009927|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK156917|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK171444|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	BC088984|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)
mm9_v1_chr4_-_86204177_86204229	0.166235	RUNX1..3.p2	AK015673|Fam154a|75811|family with sequence similarity 154, member A	NM_001081096|Fam154a|75811|family with sequence similarity 154, member A	AK076898|Fam154a|75811|family with sequence similarity 154, member A
mm9_v1_chr10_+_127303528_127303611	0.163345	RUNX1..3.p2	AY053572|BC089597|216454|cDNA sequence BC089597	NM_145424|BC089597|216454|cDNA sequence BC089597	AK144071|BC089597|216454|cDNA sequence BC089597	BC018263|BC089597|216454|cDNA sequence BC089597	BC089597|BC089597|216454|cDNA sequence BC089597	AY053571|BC089597|216454|cDNA sequence BC089597
mm9_v1_chr1_-_84281018_84281160	0.161448	RUNX1..3.p2	AK035542|Pid1|98496|phosphotyrosine interaction domain containing 1	AK083256|Pid1|98496|phosphotyrosine interaction domain containing 1	AK150971|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr4_-_132383213_132383408	0.160916	RUNX1..3.p2	AK198369|Ppp1r8|100336|protein phosphatase 1, regulatory (inhibitor) subunit 8
mm9_v1_chr12_-_82695968_82696003	0.159257	RUNX1..3.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr8_-_73174451_73174575	0.157092	RUNX1..3.p2	
mm9_v1_chr8_-_73121418_73121547	0.156557	RUNX1..3.p2	
mm9_v1_chr8_+_98057984_98058038	0.156493	RUNX1..3.p2	AK077130|Ccdc113|244608|coiled-coil domain containing 113	NM_172914|Ccdc113|244608|coiled-coil domain containing 113	BC060957|Ccdc113|244608|coiled-coil domain containing 113	BC048506|Ccdc113|244608|coiled-coil domain containing 113
mm9_v1_chr10_-_23506850_23506973	0.154767	RUNX1..3.p2	X15962|Rps12|20042|ribosomal protein S12
mm9_v1_chr13_+_55724355_55724380	0.154172	RUNX1..3.p2	AK002895|Caml|12328|calcium modulating ligand	NM_007596|Caml|12328|calcium modulating ligand
mm9_v1_chr5_-_147396407_147396450	0.153279	RUNX1..3.p2	D21061|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr5_-_87521097_87521106	0.153188	RUNX1..3.p2	AK149596|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36
mm9_v1_chr2_-_119034488_119034539	0.153082	RUNX1..3.p2	AK077385|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17	BC013487|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17	NM_139139|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17
mm9_v1_chr11_+_88006704_88006818	0.152364	RUNX1..3.p2	BC027667|Cuedc1|103841|CUE domain containing 1	BC051492|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr3_+_100629381_100629481	0.149939	RUNX1..3.p2	AK143276|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	AK145664|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	NM_178594|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	AY346099|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	BC032925|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	AY280973|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1	AY322147|Vtcn1|242122|V-set domain containing T cell activation inhibitor 1
mm9_v1_chr11_+_68970573_68970573	0.14991	RUNX1..3.p2	NM_009659|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type	Y14334|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type
mm9_v1_chr3_+_105762425_105762460	0.14922	RUNX1..3.p2	AK012014|Wdr77|70465|WD repeat domain 77	AK161812|Wdr77|70465|WD repeat domain 77	BC005755|Wdr77|70465|WD repeat domain 77
mm9_v1_chr17_-_6132461_6132616	0.148002	RUNX1..3.p2	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene
mm9_v1_chr18_-_60872888_60873042	0.146049	RUNX1..3.p2	AF049894|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AF074926|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC066098|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC079561|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	NM_008306|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr6_-_83071206_83071410	0.145872	RUNX1..3.p2	AK178117|Wbp1|22377|WW domain binding protein 1	AK179139|Wbp1|22377|WW domain binding protein 1	AK184383|Wbp1|22377|WW domain binding protein 1	BC019889|Wbp1|22377|WW domain binding protein 1	AK076948|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr5_+_31916313_31916404	0.145418	RUNX1..3.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chrX_+_68617918_68617964	0.145398	RUNX1..3.p2	BC056376|Mtmr1|53332|myotubularin related protein 1	NM_016985|Mtmr1|53332|myotubularin related protein 1	BC057337|Mtmr1|53332|myotubularin related protein 1	AF073997|Mtmr1|53332|myotubularin related protein 1
mm9_v1_chr18_+_31919533_31919621	0.145176	RUNX1..3.p2	BC056948|Ammecr1l|225339|AMME chromosomal region gene 1-like	NM_153515|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK151257|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr16_+_91648068_91648092	0.143082	RUNX1..3.p2	NM_019973|Son|20658|Son DNA binding protein	NM_178880|Son|20658|Son DNA binding protein
mm9_v1_chr7_-_53965879_53966065	0.142539	RUNX1..3.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr13_-_49404519_49404608	0.139784	RUNX1..3.p2	AK157835|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	NM_015759|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	AF017369|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3
mm9_v1_chr4_-_40704838_40704877	0.138827	RUNX1..3.p2	AB044414|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	BC020034|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	AK019174|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm9_v1_chr19_+_18706439_18706451	0.138252	RUNX1..3.p2	AK169962|BC016495|225994|cDNA sequence BC016495
mm9_v1_chr4_-_124370770_124370859	0.137811	RUNX1..3.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr11_+_87430665_87430665	0.137357	RUNX1..3.p2	NM_001045527|Hsf5|327992|heat shock transcription factor family member 5
mm9_v1_chr16_-_57167417_57167485	0.137238	RUNX1..3.p2	AK004533|Nit2|52633|nitrilase family, member 2	AK004535|Nit2|52633|nitrilase family, member 2	BC020153|Nit2|52633|nitrilase family, member 2	AF284573|Nit2|52633|nitrilase family, member 2	NM_023175|Nit2|52633|nitrilase family, member 2
mm9_v1_chr8_-_122129081_122129139	0.136518	RUNX1..3.p2	BC058383|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	AK156718|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	AK030522|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	AK052250|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	BC051944|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	AK154846|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	AK087534|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	NM_021441|Taf1c|21341|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C
mm9_v1_chr5_-_137748882_137748932	0.136206	RUNX1..3.p2	AK144300|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)	NM_001109909|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)	NM_001109910|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)	NM_031405|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)
mm9_v1_chr15_+_73555336_73555359	0.136146	RUNX1..3.p2	BC066043|Ptp4a3|19245|protein tyrosine phosphatase 4a3	NM_001166388|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr9_-_109398367_109398367	0.135149	RUNX1..3.p2	AK087808|Fbxw19|235612|F-box and WD-40 domain protein 19	NM_177703|Fbxw19|235612|F-box and WD-40 domain protein 19
mm9_v1_chr1_+_174242554_174242688	0.135061	RUNX1..3.p2	AF439263|Igsf8|140559|immunoglobulin superfamily, member 8	AF411055|Igsf8|140559|immunoglobulin superfamily, member 8	AK213338|Igsf8|140559|immunoglobulin superfamily, member 8
mm9_v1_chr5_-_139960370_139960390	0.133829	RUNX1..3.p2	BC058780|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK146082|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK171245|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr11_-_76031013_76031165	0.133384	RUNX1..3.p2	BC031425|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK028076|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK165864|Gemin4|276919|gem (nuclear organelle) associated protein 4	BC062157|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK141078|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK154061|Gemin4|276919|gem (nuclear organelle) associated protein 4	NM_177367|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK133821|Gemin4|276919|gem (nuclear organelle) associated protein 4
mm9_v1_chr15_+_75740152_75740190	0.132139	RUNX1..3.p2	AK051177|Tigd5|105734|tigger transposable element derived 5	BC099838|Tigd5|105734|tigger transposable element derived 5	NM_178646|Tigd5|105734|tigger transposable element derived 5	AK036241|Tigd5|105734|tigger transposable element derived 5	AK086663|Tigd5|105734|tigger transposable element derived 5	AK165093|Tigd5|105734|tigger transposable element derived 5	BC138289|Tigd5|105734|tigger transposable element derived 5
mm9_v1_chr4_-_46562128_46562130	0.132067	RUNX1..3.p2	
mm9_v1_chr2_-_35056446_35056576	0.130078	RUNX1..3.p2	AK165812|Rab14|68365|RAB14, member RAS oncogene family	AK013410|Rab14|68365|RAB14, member RAS oncogene family	AJ968955|Rab14|68365|RAB14, member RAS oncogene family	AJ968956|Rab14|68365|RAB14, member RAS oncogene family	AJ968957|Rab14|68365|RAB14, member RAS oncogene family	AJ968958|Rab14|68365|RAB14, member RAS oncogene family	AJ968959|Rab14|68365|RAB14, member RAS oncogene family	AJ968960|Rab14|68365|RAB14, member RAS oncogene family	AK168551|Rab14|68365|RAB14, member RAS oncogene family	AK169946|Rab14|68365|RAB14, member RAS oncogene family	AK168867|Rab14|68365|RAB14, member RAS oncogene family	AK169396|Rab14|68365|RAB14, member RAS oncogene family	BC025139|Rab14|68365|RAB14, member RAS oncogene family	AK002704|Rab14|68365|RAB14, member RAS oncogene family	BC056648|Rab14|68365|RAB14, member RAS oncogene family	AK043699|Rab14|68365|RAB14, member RAS oncogene family	AK135751|Rab14|68365|RAB14, member RAS oncogene family	AK133963|Rab14|68365|RAB14, member RAS oncogene family
mm9_v1_chr8_+_87823530_87823828	0.128796	RUNX1..3.p2	NM_001163791|Orc6|56452|origin recognition complex, subunit 6	NM_019716|Orc6|56452|origin recognition complex, subunit 6	AK163256|Orc6|56452|origin recognition complex, subunit 6	AF139659|Orc6|56452|origin recognition complex, subunit 6	AK078405|Orc6|56452|origin recognition complex, subunit 6	BC048689|Orc6|56452|origin recognition complex, subunit 6	BC080739|Orc6|56452|origin recognition complex, subunit 6
mm9_v1_chr9_+_123371135_123371218	0.127591	RUNX1..3.p2	AY248755|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chr2_+_74529947_74530004	0.125434	RUNX1..3.p2	AK134330|Hoxd10|15430|homeobox D10	BC048690|Hoxd10|15430|homeobox D10	NM_013554|Hoxd10|15430|homeobox D10
mm9_v1_chr11_-_5849601_5849601	0.12462	RUNX1..3.p2	L38990|Gck|103988|glucokinase	NM_010292|Gck|103988|glucokinase
mm9_v1_chr7_+_98239427_98239516	0.12392	RUNX1..3.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr5_+_147644594_147644770	0.123533	RUNX1..3.p2	AK008457|Rpl21|19933|ribosomal protein L21	AK018480|Rpl21|19933|ribosomal protein L21	BC086905|Rpl21|19933|ribosomal protein L21	BC086935|Rpl21|19933|ribosomal protein L21	AK002940|Rpl21|19933|ribosomal protein L21	BC086904|Rpl21|19933|ribosomal protein L21	BC089582|Rpl21|19933|ribosomal protein L21	AK146440|Rpl21|19933|ribosomal protein L21	BC106116|Rpl21|19933|ribosomal protein L21	BC138299|Rpl21|19933|ribosomal protein L21	BC138300|Rpl21|19933|ribosomal protein L21	BC094410|Rpl21|19933|ribosomal protein L21	BC096404|Rpl21|19933|ribosomal protein L21	U93863|Rpl21|19933|ribosomal protein L21	BC090256|Rpl21|19933|ribosomal protein L21	AK168998|Rpl21|19933|ribosomal protein L21
mm9_v1_chr8_-_97855675_97855849	0.122941	RUNX1..3.p2	BC033441|Zfp319|79233|zinc finger protein 319	AK052274|Zfp319|79233|zinc finger protein 319	AK089263|Zfp319|79233|zinc finger protein 319	AK048624|Zfp319|79233|zinc finger protein 319	BC059823|Zfp319|79233|zinc finger protein 319	NM_024467|Zfp319|79233|zinc finger protein 319
mm9_v1_chr12_+_82047269_82047362	0.122093	RUNX1..3.p2	AK088358|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr2_-_21126852_21126991	0.121816	RUNX1..3.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr2_+_104657018_104657084	0.120286	RUNX1..3.p2	AK009882|2310047K21Rik|71928|RIKEN cDNA 2310047K21 gene
mm9_v1_chr7_-_28835041_28835115	0.119519	RUNX1..3.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr11_-_118900480_118900571	0.11699	RUNX1..3.p2	AK051905|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)
mm9_v1_chr10_-_84647533_84647834	0.113692	RUNX1..3.p2	AF156986|Cry1|12952|cryptochrome 1 (photolyase-like)	BC022174|Cry1|12952|cryptochrome 1 (photolyase-like)	AK162460|Cry1|12952|cryptochrome 1 (photolyase-like)	BC085499|Cry1|12952|cryptochrome 1 (photolyase-like)	NM_007771|Cry1|12952|cryptochrome 1 (photolyase-like)	AK133818|Cry1|12952|cryptochrome 1 (photolyase-like)
mm9_v1_chr2_-_114480618_114480699	0.111385	RUNX1..3.p2	AK006965|Atpbd4|66632|ATP binding domain 4	AK017595|Atpbd4|66632|ATP binding domain 4	AK145789|Atpbd4|66632|ATP binding domain 4	AK033888|Atpbd4|66632|ATP binding domain 4	AK088160|Atpbd4|66632|ATP binding domain 4	NM_025675|Atpbd4|66632|ATP binding domain 4	AK007021|Atpbd4|66632|ATP binding domain 4	BC022995|Atpbd4|66632|ATP binding domain 4	AK036021|Atpbd4|66632|ATP binding domain 4	AK082013|Atpbd4|66632|ATP binding domain 4
mm9_v1_chr18_+_60685851_60685863	0.111364	RUNX1..3.p2	AK163240|Dctn4|67665|dynactin 4
mm9_v1_chr16_-_11909420_11909546	0.111236	RUNX1..3.p2	BC025476|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029379|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK032288|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK041329|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	BC034347|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK133977|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK080876|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK049721|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK134718|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	NM_146067|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029442|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1
mm9_v1_chr9_+_20692618_20692740	0.111073	RUNX1..3.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr7_-_108971734_108971860	0.110331	RUNX1..3.p2	
mm9_v1_chr7_+_127821167_127821282	0.109996	RUNX1..3.p2	BC030336|BC030336|233812|cDNA sequence BC030336	AK052350|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr17_-_31414199_31414284	0.109222	RUNX1..3.p2	DQ141549|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141550|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141551|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141553|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141554|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141555|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	DQ141556|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)	AK005739|Rsph1|22092|radial spoke head 1 homolog (Chlamydomonas)
mm9_v1_chr11_+_51912319_51912329	0.107689	RUNX1..3.p2	AK076110|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	NM_019411|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr7_-_112145415_112145415	0.1067	RUNX1..3.p2	NM_146760|Olfr672|258755|olfactory receptor 672
mm9_v1_chrX_-_115594254_115594345	0.1055	RUNX1..3.p2	BC111833|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	AF434662|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	NM_153109|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	AK132935|Tgif2lx1|245583|TGFB-induced factor homeobox 2-like, X-linked 1	NM_001142750|Tgif2lx2|100039551|TGFB-induced factor homeobox 2-like, X-linked 2
mm9_v1_chr13_-_14155631_14155710	0.105435	RUNX1..3.p2	BC006798|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK132907|Ggps1|14593|geranylgeranyl diphosphate synthase 1	BC069913|Ggps1|14593|geranylgeranyl diphosphate synthase 1	NM_010282|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK007605|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK089026|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK011980|Ggps1|14593|geranylgeranyl diphosphate synthase 1
mm9_v1_chr8_+_91115856_91115922	0.102989	RUNX1..3.p2	AK192443|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK193874|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr19_-_8788307_8788398	0.10286	RUNX1..3.p2	X14309|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AB023408|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	U25708|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	BC065173|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK090046|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165550|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165417|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_008577|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr4_+_10801637_10801754	0.102509	RUNX1..3.p2	NM_026005|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	AK011950|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	AK146358|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene	BC058777|2610301B20Rik|67157|RIKEN cDNA 2610301B20 gene
mm9_v1_chr8_+_13060907_13061026	0.100744	RUNX1..3.p2	AK008819|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	NM_025834|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC024104|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC038045|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	AK005011|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein
mm9_v1_chr9_-_40772194_40772194	0.100172	RUNX1..3.p2	NM_001081121|4931429I11Rik|70989|RIKEN cDNA 4931429I11 gene
mm9_v1_chr3_-_89856250_89856452	0.0998165	RUNX1..3.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr19_+_5366979_5367035	0.0987445	RUNX1..3.p2	AK031807|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK083659|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK153194|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK168598|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK158977|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK008070|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK168102|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	AK168253|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing
mm9_v1_chr6_-_37249957_37249977	0.0981811	RUNX1..3.p2	AK081360|Dgki|320127|diacylglycerol kinase, iota	NM_001081206|Dgki|320127|diacylglycerol kinase, iota
mm9_v1_chr17_-_32326407_32326493	0.0978489	RUNX1..3.p2	AK132483|Ephx3|71932|epoxide hydrolase 3	NM_001033163|Ephx3|71932|epoxide hydrolase 3	AK010021|Ephx3|71932|epoxide hydrolase 3	BC145797|Ephx3|71932|epoxide hydrolase 3
mm9_v1_chr12_-_70458134_70458151	0.0973769	RUNX1..3.p2	AK005212|Nemf|66244|nuclear export mediator factor	AK041458|Nemf|66244|nuclear export mediator factor	AK171652|Nemf|66244|nuclear export mediator factor	BC080716|Nemf|66244|nuclear export mediator factor
mm9_v1_chr16_-_38294877_38294920	0.0967426	RUNX1..3.p2	AK011108|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	AK018630|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	NM_001098404|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	NM_010936|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2
mm9_v1_chr12_-_82695944_82695966	0.0953413	RUNX1..3.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr11_-_77326748_77326921	0.0943449	RUNX1..3.p2	BC147324|Trp53i13|216964|transformation related protein 53 inducible protein 13	BC147325|Trp53i13|216964|transformation related protein 53 inducible protein 13	NM_001024920|Trp53i13|216964|transformation related protein 53 inducible protein 13
mm9_v1_chr8_+_108378977_108379101	0.093323	RUNX1..3.p2	NM_021513|Thap11|59016|THAP domain containing 11	AK166109|Thap11|59016|THAP domain containing 11	AK170457|Thap11|59016|THAP domain containing 11	AB041579|Thap11|59016|THAP domain containing 11	AK165981|Thap11|59016|THAP domain containing 11	BC138966|Thap11|59016|THAP domain containing 11	BC138987|Thap11|59016|THAP domain containing 11
mm9_v1_chr10_+_20032269_20032343	0.0911494	RUNX1..3.p2	NM_001025392|Bclaf1|72567|BCL2-associated transcription factor 1	NM_001025393|Bclaf1|72567|BCL2-associated transcription factor 1	NM_153787|Bclaf1|72567|BCL2-associated transcription factor 1	AK161692|Bclaf1|72567|BCL2-associated transcription factor 1	BC086624|Bclaf1|72567|BCL2-associated transcription factor 1	AK162896|Bclaf1|72567|BCL2-associated transcription factor 1	AK141834|Bclaf1|72567|BCL2-associated transcription factor 1	AK149724|Bclaf1|72567|BCL2-associated transcription factor 1	AK150017|Bclaf1|72567|BCL2-associated transcription factor 1	AK088741|Bclaf1|72567|BCL2-associated transcription factor 1	AK011802|Bclaf1|72567|BCL2-associated transcription factor 1	BC028963|Bclaf1|72567|BCL2-associated transcription factor 1	BC034300|Bclaf1|72567|BCL2-associated transcription factor 1	BC029682|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr10_+_5057034_5057137	0.0891087	RUNX1..3.p2	
mm9_v1_chr4_-_40704879_40704948	0.0882973	RUNX1..3.p2	AK159635|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	AK003493|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	AK168813|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	AK011140|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	AK145982|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	NM_021535|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm9_v1_chr9_-_20297116_20297218	0.0882265	RUNX1..3.p2	AK036912|Zfp426|235028|zinc finger protein 426	AK048284|Zfp426|235028|zinc finger protein 426	BC023931|Zfp426|235028|zinc finger protein 426	BC024805|Zfp426|235028|zinc finger protein 426	AK220563|Zfp426|235028|zinc finger protein 426	AK085144|Zfp426|235028|zinc finger protein 426	NM_001110309|Zfp426|235028|zinc finger protein 426	NM_146221|Zfp426|235028|zinc finger protein 426
mm9_v1_chr9_-_96379093_96379128	0.0876608	RUNX1..3.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr18_+_52805869_52805873	0.0854816	RUNX1..3.p2	AK018840|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene	BC048563|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene	NM_030097|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene
mm9_v1_chr2_+_165480795_165480797	0.085398	RUNX1..3.p2	BC003755|Eya2|14049|eyes absent 2 homolog (Drosophila)	NM_010165|Eya2|14049|eyes absent 2 homolog (Drosophila)
mm9_v1_chr18_-_37803782_37803859	0.0851494	RUNX1..3.p2	BC029673|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AF144562|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK075700|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK029380|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK076362|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK089054|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_175770|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr11_+_67779992_67780002	0.0847706	RUNX1..3.p2	AK166117|Stx8|55943|syntaxin 8	AF036716|Stx8|55943|syntaxin 8
mm9_v1_chrX_-_103680566_103680612	0.084276	RUNX1..3.p2	BC085176|Fndc3c1|333564|fibronectin type III domain containing 3C1	BC076625|Fndc3c1|333564|fibronectin type III domain containing 3C1	NM_001007580|Fndc3c1|333564|fibronectin type III domain containing 3C1	DQ192038|Fndc3c1|333564|fibronectin type III domain containing 3C1
mm9_v1_chr13_+_55724400_55724442	0.084008	RUNX1..3.p2	U21960|Caml|12328|calcium modulating ligand	BC005688|Caml|12328|calcium modulating ligand
mm9_v1_chr5_+_138613248_138613363	0.0836102	RUNX1..3.p2	AK031638|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	NM_021392|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	AK165187|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	BC011174|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1
mm9_v1_chr6_-_134582365_134582505	0.0833789	RUNX1..3.p2	BC039930|Mansc1|67729|MANSC domain containing 1	AK046837|Mansc1|67729|MANSC domain containing 1	AK018635|Mansc1|67729|MANSC domain containing 1	AK002644|Mansc1|67729|MANSC domain containing 1	AK033526|Mansc1|67729|MANSC domain containing 1	AK018660|Mansc1|67729|MANSC domain containing 1	AK171842|Mansc1|67729|MANSC domain containing 1	AK033557|Mansc1|67729|MANSC domain containing 1	NM_026345|Mansc1|67729|MANSC domain containing 1
mm9_v1_chr6_+_24478143_24478211	0.083136	RUNX1..3.p2	AF403043|Asb15|78910|ankyrin repeat and SOCS box-containing 15	AK019556|Asb15|78910|ankyrin repeat and SOCS box-containing 15	NM_080847|Asb15|78910|ankyrin repeat and SOCS box-containing 15	BC050794|Asb15|78910|ankyrin repeat and SOCS box-containing 15	AK029759|Asb15|78910|ankyrin repeat and SOCS box-containing 15
mm9_v1_chr8_-_4217275_4217311	0.0827508	RUNX1..3.p2	BC068157|BC068157|73072|cDNA sequence BC068157	NM_207203|BC068157|73072|cDNA sequence BC068157
mm9_v1_chr4_+_101927543_101927649	0.0821596	RUNX1..3.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr17_-_65962616_65962686	0.0808735	RUNX1..3.p2	AF115503|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK012357|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr5_-_145908992_145909289	0.079152	RUNX1..3.p2	AK216509|Ptcd1|71799|pentatricopeptide repeat domain 1	AK213622|Ptcd1|71799|pentatricopeptide repeat domain 1	AK004421|Ptcd1|71799|pentatricopeptide repeat domain 1	AK218479|Ptcd1|71799|pentatricopeptide repeat domain 1	AK166306|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chr4_-_136448748_136448871	0.0785707	RUNX1..3.p2	X66295|C1qc|12262|complement component 1, q subcomponent, C chain	BC069926|C1qc|12262|complement component 1, q subcomponent, C chain	BC054443|C1qc|12262|complement component 1, q subcomponent, C chain	BC075724|C1qc|12262|complement component 1, q subcomponent, C chain	BC043945|C1qc|12262|complement component 1, q subcomponent, C chain	AK138974|C1qc|12262|complement component 1, q subcomponent, C chain	NM_007574|C1qc|12262|complement component 1, q subcomponent, C chain
mm9_v1_chr4_-_126106749_126106807	0.0785127	RUNX1..3.p2	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr9_-_119118203_119118222	0.0781142	RUNX1..3.p2	BC021449|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	AF529220|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	NM_133980|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13
mm9_v1_chr11_-_120442889_120442950	0.0777856	RUNX1..3.p2	AK170553|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK143516|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK165241|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK170718|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	NM_133796|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr8_-_72426456_72426456	0.0763051	RUNX1..3.p2	BC034899|Ndufa13|67184|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	NM_023312|Ndufa13|67184|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
mm9_v1_chr8_+_113443764_113443921	0.0761078	RUNX1..3.p2	NM_009179|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK031052|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK034863|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK053827|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	AK029246|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2	BC066064|St3gal2|20444|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
mm9_v1_chr10_-_121063321_121063512	0.0748435	RUNX1..3.p2	NM_001081056|Xpot|73192|exportin, tRNA (nuclear export receptor for tRNAs)
mm9_v1_chr7_+_6124083_6124158	0.0745695	RUNX1..3.p2	BC023396|Zfp444|72667|zinc finger protein 444	AK169973|Zfp444|72667|zinc finger protein 444	AK018079|Zfp444|72667|zinc finger protein 444	NM_001146024|Zfp444|72667|zinc finger protein 444	NM_028316|Zfp444|72667|zinc finger protein 444	AK089886|Zfp444|72667|zinc finger protein 444	BC037180|Zfp444|72667|zinc finger protein 444	BC139359|Zfp444|72667|zinc finger protein 444	BC139361|Zfp444|72667|zinc finger protein 444
mm9_v1_chr7_+_107422781_107422864	0.0734438	RUNX1..3.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr2_+_130401908_130401945	0.0715421	RUNX1..3.p2	AK003042|Oxt|18429|oxytocin	NM_011025|Oxt|18429|oxytocin	BC117030|Oxt|18429|oxytocin	BC117032|Oxt|18429|oxytocin	AF483508|Oxt|18429|oxytocin	AF483509|Oxt|18429|oxytocin
mm9_v1_chr5_-_21151348_21151451	0.0679722	RUNX1..3.p2	BC145291|Fbxl13|320118|F-box and leucine-rich repeat protein 13	BC145292|Fbxl13|320118|F-box and leucine-rich repeat protein 13	AK030172|Fbxl13|320118|F-box and leucine-rich repeat protein 13	AK029566|Fbxl13|320118|F-box and leucine-rich repeat protein 13	NM_177076|Fbxl13|320118|F-box and leucine-rich repeat protein 13
mm9_v1_chr1_+_43155550_43155613	0.0663691	RUNX1..3.p2	BC006931|AI597479|98404|expressed sequence AI597479	NM_133818|AI597479|98404|expressed sequence AI597479	AK081372|AI597479|98404|expressed sequence AI597479
mm9_v1_chr13_+_41746130_41746130	0.0653718	RUNX1..3.p2	BC098182|Gm5082|328231|predicted gene 5082	NM_001145878|Gm5082|328231|predicted gene 5082
mm9_v1_chr14_+_61403399_61403486	0.0646334	RUNX1..3.p2	NM_027436|Mipep|70478|mitochondrial intermediate peptidase	AK038479|Mipep|70478|mitochondrial intermediate peptidase	AK044460|Mipep|70478|mitochondrial intermediate peptidase	AK146428|Mipep|70478|mitochondrial intermediate peptidase	BC144798|Mipep|70478|mitochondrial intermediate peptidase	BC145711|Mipep|70478|mitochondrial intermediate peptidase	BC110358|Mipep|70478|mitochondrial intermediate peptidase	AK017491|Mipep|70478|mitochondrial intermediate peptidase	AK049000|Mipep|70478|mitochondrial intermediate peptidase	AK076613|Mipep|70478|mitochondrial intermediate peptidase
mm9_v1_chr18_+_37454493_37454629	0.0634576	RUNX1..3.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr8_+_23393912_23393912	0.0615446	RUNX1..3.p2	AJ311311|Tpte|234129|transmembrane phosphatase with tensin homology	AJ311312|Tpte|234129|transmembrane phosphatase with tensin homology	AJ311313|Tpte|234129|transmembrane phosphatase with tensin homology	NM_199257|Tpte|234129|transmembrane phosphatase with tensin homology
mm9_v1_chr18_+_36687800_36687810	0.0588922	RUNX1..3.p2	AK143939|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085424|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK128930|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK142545|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085269|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	NM_172830|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113179|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113785|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm9_v1_chr4_-_94269767_94269798	0.0587467	RUNX1..3.p2	M57958|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr1_-_59220232_59220232	0.0584771	RUNX1..3.p2	AK044682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	NM_001164682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm9_v1_chr18_-_61885933_61886002	0.0577968	RUNX1..3.p2	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr6_-_146582942_146583021	0.0545916	RUNX1..3.p2	AK204708|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK010720|Tm7sf3|67623|transmembrane 7 superfamily member 3	BC049960|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr4_+_114672849_114672868	0.0544927	RUNX1..3.p2	BC141175|Stil|20460|Scl/Tal1 interrupting locus	BC145493|Stil|20460|Scl/Tal1 interrupting locus
mm9_v1_chr15_+_38944419_38944480	0.0537048	RUNX1..3.p2	NM_198606|Dcaf13|223499|DDB1 and CUL4 associated factor 13	BC060375|Dcaf13|223499|DDB1 and CUL4 associated factor 13
mm9_v1_chr1_-_158330120_158330120	0.0536598	RUNX1..3.p2	AK134071|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene	NM_001198597|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene
mm9_v1_chr9_-_20189550_20189620	0.0533525	RUNX1..3.p2	AK006129|Zfp560|434377|zinc finger protein 560	AK012259|Zfp560|434377|zinc finger protein 560	AK009475|Zfp560|434377|zinc finger protein 560	AK009542|Zfp560|434377|zinc finger protein 560	AK010001|Zfp560|434377|zinc finger protein 560	BC141211|Zfp560|434377|zinc finger protein 560	AK141494|Zfp560|434377|zinc finger protein 560	NM_001004190|Zfp560|434377|zinc finger protein 560	AK012062|Zfp560|434377|zinc finger protein 560
mm9_v1_chr15_-_31383379_31383491	0.05185	RUNX1..3.p2	BC048680|Ropn1l|252967|ropporin 1-like	AF305427|Ropn1l|252967|ropporin 1-like	BC060990|Ropn1l|252967|ropporin 1-like	NM_145852|Ropn1l|252967|ropporin 1-like	AK131675|Ropn1l|252967|ropporin 1-like
mm9_v1_chr11_-_120442851_120442887	0.0513943	RUNX1..3.p2	BC086755|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	BC004732|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK156819|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK172140|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr17_-_29144679_29144968	0.0509362	RUNX1..3.p2	AK184259|Stk38|106504|serine/threonine kinase 38	AY292399|Stk38|106504|serine/threonine kinase 38	AK020024|Stk38|106504|serine/threonine kinase 38	AK133644|Stk38|106504|serine/threonine kinase 38	AK164081|Stk38|106504|serine/threonine kinase 38	AK084433|Stk38|106504|serine/threonine kinase 38	BC009658|Stk38|106504|serine/threonine kinase 38	NM_134115|Stk38|106504|serine/threonine kinase 38	AK035731|Stk38|106504|serine/threonine kinase 38	AK080179|Stk38|106504|serine/threonine kinase 38
mm9_v1_chr11_-_32167566_32167650	0.0503285	RUNX1..3.p2	AK036405|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	NM_181569|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	AK047190|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	AK081902|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	AK086378|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)
mm9_v1_chr1_+_34496673_34496884	0.0486846	RUNX1..3.p2	NM_178601|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK151176|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK152214|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK008178|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK010504|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK018039|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK166903|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK084933|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK013334|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC069930|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AF334609|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK004135|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC037602|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr7_+_13483153_13483228	0.0460771	RUNX1..3.p2	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chrX_+_102959815_102959879	0.0441966	RUNX1..3.p2	BC132641|Fgf16|80903|fibroblast growth factor 16	BC137993|Fgf16|80903|fibroblast growth factor 16	NM_030614|Fgf16|80903|fibroblast growth factor 16	AB049219|Fgf16|80903|fibroblast growth factor 16	AF292104|Fgf16|80903|fibroblast growth factor 16
mm9_v1_chr2_+_164228640_164228712	0.0441242	RUNX1..3.p2	AK052449|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like	NM_009036|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like	Y10926|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like	BC152311|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like	AK131832|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like	AK131814|Rbpjl|19668|recombination signal binding protein for immunoglobulin kappa J region-like
mm9_v1_chr2_+_24132788_24133018	0.0425273	RUNX1..3.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr5_-_141178229_141178331	0.0420965	RUNX1..3.p2	AK029333|Iqce|74239|IQ motif containing E	BC059223|Iqce|74239|IQ motif containing E	NM_028833|Iqce|74239|IQ motif containing E
mm9_v1_chr4_+_48553291_48553370	0.0418373	RUNX1..3.p2	BC052696|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK013199|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_028137|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr2_-_90910332_90910406	0.0415413	RUNX1..3.p2	BC125525|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC137752|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK035296|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	NM_026721|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC020106|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK156951|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr17_+_12571494_12571524	0.0385723	RUNX1..3.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr9_-_58050340_58050340	0.0362135	RUNX1..3.p2	NM_001161538|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr11_+_106078232_106078424	0.0359114	RUNX1..3.p2	AK049311|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_028074|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK169816|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK021013|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK171730|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK134182|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm9_v1_chrX_+_72082534_72082534	0.0343779	RUNX1..3.p2	NM_001081670|Gm5936|546325|predicted gene 5936
mm9_v1_chr4_-_49519417_49519429	0.032878	RUNX1..3.p2	NM_007519|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr6_-_29457924_29457972	0.0323559	RUNX1..3.p2	BC119794|Kcp|333088|kielin/chordin-like protein	NM_001029985|Kcp|333088|kielin/chordin-like protein	AY884211|Kcp|333088|kielin/chordin-like protein	AK154369|Kcp|333088|kielin/chordin-like protein
mm9_v1_chr1_-_75206018_75206068	0.0320134	RUNX1..3.p2	BC021773|Glb1l|74577|galactosidase, beta 1-like	AK014667|Glb1l|74577|galactosidase, beta 1-like
mm9_v1_chr8_-_23043181_23043181	0.0319212	RUNX1..3.p2	AJ437648|Defb15|246082|defensin beta 15	NM_139222|Defb15|246082|defensin beta 15
mm9_v1_chr9_+_99143756_99143900	0.0311847	RUNX1..3.p2	AK021095|Cep70|68121|centrosomal protein 70	AK020622|Cep70|68121|centrosomal protein 70	AF242319|Cep70|68121|centrosomal protein 70	AK049326|Cep70|68121|centrosomal protein 70	AK133048|Cep70|68121|centrosomal protein 70	BC071260|Cep70|68121|centrosomal protein 70	NM_023873|Cep70|68121|centrosomal protein 70	BC050819|Cep70|68121|centrosomal protein 70	AK020174|Cep70|68121|centrosomal protein 70
mm9_v1_chr11_+_102006824_102006826	0.0305135	RUNX1..3.p2	BC036161|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr16_+_37011839_37011930	0.0290305	RUNX1..3.p2	AY074936|Polq|77782|polymerase (DNA directed), theta	AY147862|Polq|77782|polymerase (DNA directed), theta	AY147863|Polq|77782|polymerase (DNA directed), theta	AY147864|Polq|77782|polymerase (DNA directed), theta	NM_001159369|Polq|77782|polymerase (DNA directed), theta	NM_029977|Polq|77782|polymerase (DNA directed), theta	AK020790|Polq|77782|polymerase (DNA directed), theta	BC138360|Polq|77782|polymerase (DNA directed), theta	BC157900|Polq|77782|polymerase (DNA directed), theta
mm9_v1_chr11_+_4604650_4604703	0.0287523	RUNX1..3.p2	AK051823|Zmat5|67178|zinc finger, matrin type 5	AK012098|Zmat5|67178|zinc finger, matrin type 5	NM_026015|Zmat5|67178|zinc finger, matrin type 5	AK003361|Zmat5|67178|zinc finger, matrin type 5	AK007565|Zmat5|67178|zinc finger, matrin type 5	AK013415|Zmat5|67178|zinc finger, matrin type 5	BC031796|Zmat5|67178|zinc finger, matrin type 5
mm9_v1_chr17_+_36053855_36053941	0.0286061	RUNX1..3.p2	NM_175934|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK004266|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK011552|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079389|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK031654|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK053183|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079918|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	BC030903|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr6_-_138606964_138607064	0.0263568	RUNX1..3.p2	AJ010637|Igbp1b|50540|immunoglobulin (CD79A) binding protein 1b	NM_015777|Igbp1b|50540|immunoglobulin (CD79A) binding protein 1b	BC125601|Igbp1b|50540|immunoglobulin (CD79A) binding protein 1b	BC131968|Igbp1b|50540|immunoglobulin (CD79A) binding protein 1b
mm9_v1_chr1_+_187251960_187252031	0.025993	RUNX1..3.p2	AK166460|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chr12_+_37835132_37835270	0.0254496	RUNX1..3.p2	AK028352|Meox2|17286|mesenchyme homeobox 2	NM_008584|Meox2|17286|mesenchyme homeobox 2	AK031152|Meox2|17286|mesenchyme homeobox 2	BC002076|Meox2|17286|mesenchyme homeobox 2	AK142690|Meox2|17286|mesenchyme homeobox 2	Z16406|Meox2|17286|mesenchyme homeobox 2
mm9_v1_chr17_-_25864310_25864359	0.0241285	RUNX1..3.p2	BC083096|Chtf18|214901|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	AK052673|Chtf18|214901|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	AK077947|Chtf18|214901|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	BC024142|Chtf18|214901|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	NM_145409|Chtf18|214901|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
mm9_v1_chr7_+_87391261_87391440	0.0224642	RUNX1..3.p2	AK029565|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	NM_177765|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK007167|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK161519|Ttll13|269954|tubulin tyrosine ligase-like family, member 13
mm9_v1_chr3_+_92748407_92748407	0.0215868	RUNX1..3.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr14_+_66915852_66915861	0.0213817	RUNX1..3.p2	NM_029979|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr4_+_155367248_155367498	0.0196455	RUNX1..3.p2	AK163400|Sdf4|20318|stromal cell derived factor 4	AK167113|Sdf4|20318|stromal cell derived factor 4	AK157860|Sdf4|20318|stromal cell derived factor 4	U45978|Sdf4|20318|stromal cell derived factor 4	AK014418|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr10_-_75931858_75931858	0.0184949	RUNX1..3.p2	BC057308|Ybey|216119|ybeY metallopeptidase	NM_172550|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr12_+_114782118_114782165	0.0182925	RUNX1..3.p2	AY158689|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	NM_174885|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC139059|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC108387|Adam6a|238406|a disintegrin and metallopeptidase domain 6A
mm9_v1_chr4_+_138908480_138908511	0.0168852	RUNX1..3.p2	NM_001039200|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene	NM_146157|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene
mm9_v1_chr4_+_138908512_138908512	0.0158964	RUNX1..3.p2	AK049061|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene	AK077496|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene
mm9_v1_chr5_-_120953567_120953653	0.0156161	RUNX1..3.p2	AK030234|Plbd2|71772|phospholipase B domain containing 2	BC026395|Plbd2|71772|phospholipase B domain containing 2	BC038605|Plbd2|71772|phospholipase B domain containing 2	AF217003|Plbd2|71772|phospholipase B domain containing 2	BC060095|Plbd2|71772|phospholipase B domain containing 2	AK164220|Plbd2|71772|phospholipase B domain containing 2	AK170631|Plbd2|71772|phospholipase B domain containing 2	BC048826|Plbd2|71772|phospholipase B domain containing 2	AK043608|Plbd2|71772|phospholipase B domain containing 2	AK046937|Plbd2|71772|phospholipase B domain containing 2	AK150201|Plbd2|71772|phospholipase B domain containing 2	AK170387|Plbd2|71772|phospholipase B domain containing 2	AK032930|Plbd2|71772|phospholipase B domain containing 2	AK042089|Plbd2|71772|phospholipase B domain containing 2	AK029813|Plbd2|71772|phospholipase B domain containing 2	NM_023625|Plbd2|71772|phospholipase B domain containing 2	AK004973|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr11_+_75578548_75578573	0.0123465	RUNX1..3.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr11_-_32167657_32167706	0.0120419	RUNX1..3.p2	AK154884|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	AK039600|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	AK090290|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)	BC064471|Nprl3|17168|nitrogen permease regulator-like 3 (S. cerevisiae)
mm9_v1_chr12_+_107022903_107023027	0.0119512	RUNX1..3.p2	NM_011112|Papola|18789|poly (A) polymerase alpha	AK028940|Papola|18789|poly (A) polymerase alpha	AK090096|Papola|18789|poly (A) polymerase alpha	AK132704|Papola|18789|poly (A) polymerase alpha	AK134552|Papola|18789|poly (A) polymerase alpha	BC060128|Papola|18789|poly (A) polymerase alpha	U58134|Papola|18789|poly (A) polymerase alpha	U52197|Papola|18789|poly (A) polymerase alpha
mm9_v1_chr5_-_141178143_141178224	0.0116467	RUNX1..3.p2	AK006472|Iqce|74239|IQ motif containing E	BC065128|Iqce|74239|IQ motif containing E
mm9_v1_chr4_+_122366498_122366501	0.00995381	RUNX1..3.p2	NM_023865|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr19_+_53214934_53215104	0.0082999	RUNX1..3.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr18_+_60685819_60685850	0.00768539	RUNX1..3.p2	AK016059|Dctn4|67665|dynactin 4	AK034292|Dctn4|67665|dynactin 4
mm9_v1_chr14_-_21365595_21365800	0.00640651	RUNX1..3.p2	BC037668|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AK135203|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	M81483|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AB221678|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	BC066000|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	NM_008914|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform
mm9_v1_chr5_-_29804922_29805009	0.0054582	RUNX1..3.p2	BC132283|Mnx1|15285|motor neuron and pancreas homeobox 1	BC144718|Mnx1|15285|motor neuron and pancreas homeobox 1	AF153046|Mnx1|15285|motor neuron and pancreas homeobox 1	NM_019944|Mnx1|15285|motor neuron and pancreas homeobox 1
mm9_v1_chr14_+_66915914_66915996	0.00432033	RUNX1..3.p2	AK129288|Trim35|66854|tripartite motif-containing 35	AK163749|Trim35|66854|tripartite motif-containing 35	AB060155|Trim35|66854|tripartite motif-containing 35	AK179232|Trim35|66854|tripartite motif-containing 35	BC053494|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr2_+_172073991_172073998	0.00334375	RUNX1..3.p2	AK038677|Mc3r|17201|melanocortin 3 receptor	NM_008561|Mc3r|17201|melanocortin 3 receptor	BC103669|Mc3r|17201|melanocortin 3 receptor	BC104730|Mc3r|17201|melanocortin 3 receptor	BC105667|Mc3r|17201|melanocortin 3 receptor	BC105668|Mc3r|17201|melanocortin 3 receptor
mm9_v1_chr11_-_101285982_101286065	0.0029803	RUNX1..3.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr3_+_96474053_96474053	0.00272583	RUNX1..3.p2	NM_001081139|Ankrd35|213121|ankyrin repeat domain 35
mm9_v1_chr7_+_127821093_127821157	0.00189856	RUNX1..3.p2	NM_001164580|BC030336|233812|cDNA sequence BC030336
