mm9_v1_chr15_+_6249788_6249867	31.2392	UCCAGUU	NM_001008702|Dab2|13132|disabled homolog 2 (Drosophila)	AK002850|Dab2|13132|disabled homolog 2 (Drosophila)	AK165519|Dab2|13132|disabled homolog 2 (Drosophila)	BC016887|Dab2|13132|disabled homolog 2 (Drosophila)	AK052613|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr16_+_4639921_4640005	28.6017	UCCAGUU	AK132325|Vasn|246154|vasorin	NM_139307|Vasn|246154|vasorin	AK083684|Vasn|246154|vasorin	AK012169|Vasn|246154|vasorin	BC050274|Vasn|246154|vasorin	AJ458938|Vasn|246154|vasorin
mm9_v1_chr15_+_6336747_6336872	25.0576	UCCAGUU	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr1_-_82287990_82288082	24.8567	UCCAGUU	AK045317|Irs1|16367|insulin receptor substrate 1	NM_010570|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr3_-_145312928_145312948	22.6733	UCCAGUU	BC066019|Cyr61|16007|cysteine rich protein 61	BC003205|Cyr61|16007|cysteine rich protein 61	AK156723|Cyr61|16007|cysteine rich protein 61	AK159452|Cyr61|16007|cysteine rich protein 61	M32490|Cyr61|16007|cysteine rich protein 61	NM_010516|Cyr61|16007|cysteine rich protein 61
mm9_v1_chr4_-_55545337_55545348	22.3644	UCCAGUU	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr11_-_11927973_11927973	21.9517	UCCAGUU	BC016111|Grb10|14783|growth factor receptor bound protein 10	NM_001177629|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr13_-_3892788_3892823	21.4487	UCCAGUU	AJ010045|Net1|56349|neuroepithelial cell transforming gene 1	AK020636|Net1|56349|neuroepithelial cell transforming gene 1	AK088632|Net1|56349|neuroepithelial cell transforming gene 1	AK139921|Net1|56349|neuroepithelial cell transforming gene 1	BC004699|Net1|56349|neuroepithelial cell transforming gene 1	AK082128|Net1|56349|neuroepithelial cell transforming gene 1	NM_001047159|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chr16_-_85901362_85901374	21.0445	UCCAGUU	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr11_-_11937330_11937512	20.6882	UCCAGUU	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr11_+_62944973_62945074	20.0082	UCCAGUU	NM_008885|Pmp22|18858|peripheral myelin protein 22	M32240|Pmp22|18858|peripheral myelin protein 22	BC010765|Pmp22|18858|peripheral myelin protein 22	AK076005|Pmp22|18858|peripheral myelin protein 22	AK171745|Pmp22|18858|peripheral myelin protein 22
mm9_v1_chr13_-_3917356_3917465	18.5715	UCCAGUU	AF094520|Net1|56349|neuroepithelial cell transforming gene 1	AK077728|Net1|56349|neuroepithelial cell transforming gene 1	NM_019671|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chr6_+_15670660_15670769	17.5988	UCCAGUU	AK165016|Mdfic|16543|MyoD family inhibitor domain containing	NM_175088|Mdfic|16543|MyoD family inhibitor domain containing	AK086117|Mdfic|16543|MyoD family inhibitor domain containing	AK172522|Mdfic|16543|MyoD family inhibitor domain containing	AK166462|Mdfic|16543|MyoD family inhibitor domain containing	AK080178|Mdfic|16543|MyoD family inhibitor domain containing	AK134050|Mdfic|16543|MyoD family inhibitor domain containing	AK048821|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chr10_-_6080145_6080228	17.4845	UCCAGUU	BC138365|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC138364|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB020886|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC071185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AF326228|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB051563|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB025278|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AK053844|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	NM_031185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12
mm9_v1_chr10_+_12810593_12810650	16.3374	UCCAGUU	BC065150|Plagl1|22634|pleiomorphic adenoma gene-like 1	NM_009538|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142210|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142052|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr6_+_30688050_30688066	16.0658	UCCAGUU	AK031718|Mest|17294|mesoderm specific transcript	AK032881|Mest|17294|mesoderm specific transcript	AK034949|Mest|17294|mesoderm specific transcript	AK146457|Mest|17294|mesoderm specific transcript	AK168714|Mest|17294|mesoderm specific transcript	AK168732|Mest|17294|mesoderm specific transcript	AK168743|Mest|17294|mesoderm specific transcript	AK168995|Mest|17294|mesoderm specific transcript	AK169095|Mest|17294|mesoderm specific transcript	AK169266|Mest|17294|mesoderm specific transcript	D16262|Mest|17294|mesoderm specific transcript	NM_008590|Mest|17294|mesoderm specific transcript	BC006639|Mest|17294|mesoderm specific transcript
mm9_v1_chr2_-_84490827_84490896	16.0463	UCCAGUU	BC054544|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC043108|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK161790|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK164485|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK168453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085448|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085449|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085450|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_007615|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr2_-_84490666_84490763	15.7143	UCCAGUU	NM_001085453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC046589|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chrX_-_130432840_130432967	15.2423	UCCAGUU	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr1_-_121318824_121318824	15.1121	UCCAGUU	AK132352|Inhbb|16324|inhibin beta-B	NM_008381|Inhbb|16324|inhibin beta-B
mm9_v1_chr4_-_82151180_82151288	14.9406	UCCAGUU	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr8_+_74659107_74659219	14.8894	UCCAGUU	AK049383|Tpm4|326618|tropomyosin 4	BC070421|Tpm4|326618|tropomyosin 4	NM_001001491|Tpm4|326618|tropomyosin 4	BC023701|Tpm4|326618|tropomyosin 4	BC032174|Tpm4|326618|tropomyosin 4	BC032175|Tpm4|326618|tropomyosin 4	BC023827|Tpm4|326618|tropomyosin 4
mm9_v1_chr9_+_44850426_44850426	14.6843	UCCAGUU	NM_007962|Mpzl2|14012|myelin protein zero-like 2
mm9_v1_chr8_-_37796104_37796107	14.6594	UCCAGUU	AK147539|Dlc1|50768|deleted in liver cancer 1	NM_001194941|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr10_-_95026787_95026872	14.6545	UCCAGUU	NM_027722|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm9_v1_chr9_-_116084395_116084480	14.2839	UCCAGUU	AK046561|Tgfbr2|21813|transforming growth factor, beta receptor II	AK159327|Tgfbr2|21813|transforming growth factor, beta receptor II	AK148167|Tgfbr2|21813|transforming growth factor, beta receptor II	AK053793|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_009371|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_029575|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr8_-_38001686_38001686	14.2302	UCCAGUU	HM008381|Dlc1|50768|deleted in liver cancer 1	NM_001194940|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr2_+_145611851_145611951	14.1525	UCCAGUU	NM_028724|Rin2|74030|Ras and Rab interactor 2	BC040390|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr18_-_52689279_52689397	13.9714	UCCAGUU	AK159199|Lox|16948|lysyl oxidase	AK159263|Lox|16948|lysyl oxidase	AK166386|Lox|16948|lysyl oxidase	BC018439|Lox|16948|lysyl oxidase	AK141995|Lox|16948|lysyl oxidase	NM_010728|Lox|16948|lysyl oxidase
mm9_v1_chr19_+_38598686_38598698	13.7718	UCCAGUU	AB076247|Plce1|74055|phospholipase C, epsilon 1	NM_019588|Plce1|74055|phospholipase C, epsilon 1	BC138349|Plce1|74055|phospholipase C, epsilon 1	BC138350|Plce1|74055|phospholipase C, epsilon 1	BC145246|Plce1|74055|phospholipase C, epsilon 1
mm9_v1_chr5_-_137548123_137548145	13.5281	UCCAGUU	BC054091|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	M33960|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	AK040662|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	NM_008871|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1
mm9_v1_chr1_+_93698037_93698053	13.0569	UCCAGUU	AK011180|Twist2|13345|twist homolog 2 (Drosophila)	AK011861|Twist2|13345|twist homolog 2 (Drosophila)	BC090636|Twist2|13345|twist homolog 2 (Drosophila)	NM_007855|Twist2|13345|twist homolog 2 (Drosophila)	U36384|Twist2|13345|twist homolog 2 (Drosophila)
mm9_v1_chr15_-_54109855_54110038	12.1785	UCCAGUU	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr1_-_188529867_188529872	12.1229	UCCAGUU	X57413|Tgfb2|21808|transforming growth factor, beta 2	NM_009367|Tgfb2|21808|transforming growth factor, beta 2
mm9_v1_chr16_-_45844409_45844495	11.7241	UCCAGUU	AK165251|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	AF506821|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	NM_153412|Phldb2|208177|pleckstrin homology-like domain, family B, member 2
mm9_v1_chr7_-_133819870_133819892	11.7033	UCCAGUU	BC005413|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	NM_133670|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	L02331|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	AK002700|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1
mm9_v1_chr3_+_121656136_121656252	11.661	UCCAGUU	BC040387|Arhgap29|214137|Rho GTPase activating protein 29	NM_172525|Arhgap29|214137|Rho GTPase activating protein 29
mm9_v1_chr1_+_12682510_12682540	11.6401	UCCAGUU	NM_001198565|Sulf1|240725|sulfatase 1	NM_001198566|Sulf1|240725|sulfatase 1	AK078756|Sulf1|240725|sulfatase 1
mm9_v1_chr10_-_83903215_83903291	11.4133	UCCAGUU	BC082328|Nuak1|77976|NUAK family, SNF1-like kinase, 1	NM_001004363|Nuak1|77976|NUAK family, SNF1-like kinase, 1
mm9_v1_chr1_+_12708582_12708625	11.2003	UCCAGUU	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr8_-_118230771_118230819	10.9709	UCCAGUU	AK132165|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	NM_001025577|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr5_+_32913539_32913707	10.8107	UCCAGUU	AK035612|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	AK031316|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	AK052478|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	NM_009535|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	X67677|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	BC010594|Yes1|22612|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm9_v1_chr9_+_65478364_65478420	10.7149	UCCAGUU	AK144659|Rbpms2|71973|RNA binding protein with multiple splicing 2	AK156633|Rbpms2|71973|RNA binding protein with multiple splicing 2	BC021788|Rbpms2|71973|RNA binding protein with multiple splicing 2	NM_028030|Rbpms2|71973|RNA binding protein with multiple splicing 2
mm9_v1_chr5_+_102910409_102910555	10.5667	UCCAGUU	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr11_+_112643501_112643595	10.3835	UCCAGUU	NM_011448|Sox9|20682|SRY-box containing gene 9	AK049986|Sox9|20682|SRY-box containing gene 9	AK030187|Sox9|20682|SRY-box containing gene 9	AK031516|Sox9|20682|SRY-box containing gene 9	BC023796|Sox9|20682|SRY-box containing gene 9	BC023808|Sox9|20682|SRY-box containing gene 9	BC024958|Sox9|20682|SRY-box containing gene 9	BC023953|Sox9|20682|SRY-box containing gene 9	AK220197|Sox9|20682|SRY-box containing gene 9	BC034264|Sox9|20682|SRY-box containing gene 9
mm9_v1_chr8_-_37676995_37677010	9.96121	UCCAGUU	AK162413|Dlc1|50768|deleted in liver cancer 1	NM_015802|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr4_+_97444312_97444317	9.79828	UCCAGUU	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr18_-_14131046_14131241	9.79787	UCCAGUU	BC021376|Zfp521|225207|zinc finger protein 521	AK052655|Zfp521|225207|zinc finger protein 521	AY147406|Zfp521|225207|zinc finger protein 521	NM_145492|Zfp521|225207|zinc finger protein 521
mm9_v1_chr13_+_94827750_94827786	9.59601	UCCAGUU	AK087506|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	NM_172589|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK031635|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK054342|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2
mm9_v1_chr16_+_95923988_95924060	9.53169	UCCAGUU	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr4_+_62021728_62021759	9.38197	UCCAGUU	NM_175090|Slc31a1|20529|solute carrier family 31, member 1	AK151337|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr4_+_97248556_97248685	9.34623	UCCAGUU	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chr6_+_38383918_38383949	9.3459	UCCAGUU	NM_177185|Ubn2|320538|ubinuclein 2	AK013733|Ubn2|320538|ubinuclein 2	BC051458|Ubn2|320538|ubinuclein 2
mm9_v1_chr6_-_31513817_31513936	9.2855	UCCAGUU	AB028048|Podxl|27205|podocalyxin-like	AF290209|Podxl|27205|podocalyxin-like	BC052442|Podxl|27205|podocalyxin-like	BC054530|Podxl|27205|podocalyxin-like	NM_013723|Podxl|27205|podocalyxin-like
mm9_v1_chr5_+_143722032_143722059	9.18395	UCCAGUU	NM_007984|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	AK083935|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	AK167670|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC052408|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC029281|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC010338|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC037137|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	L33726|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm9_v1_chr3_+_5218545_5218658	9.08275	UCCAGUU	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr1_-_167564449_167564681	8.96651	UCCAGUU	AK192253|Mpzl1|68481|myelin protein zero-like 1	AK192408|Mpzl1|68481|myelin protein zero-like 1	AK193736|Mpzl1|68481|myelin protein zero-like 1	AK197743|Mpzl1|68481|myelin protein zero-like 1	AY764248|Mpzl1|68481|myelin protein zero-like 1	BC072563|Mpzl1|68481|myelin protein zero-like 1	AK090278|Mpzl1|68481|myelin protein zero-like 1	AK169385|Mpzl1|68481|myelin protein zero-like 1	AY764247|Mpzl1|68481|myelin protein zero-like 1	NM_001001880|Mpzl1|68481|myelin protein zero-like 1	NM_001083897|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr5_+_13399301_13399308	8.7785	UCCAGUU	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr1_-_95375372_95375387	8.67186	UCCAGUU	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr6_+_146673451_146673548	8.54192	UCCAGUU	NM_172734|Stk38l|232533|serine/threonine kinase 38 like	AK052288|Stk38l|232533|serine/threonine kinase 38 like	AK045971|Stk38l|232533|serine/threonine kinase 38 like	AY223819|Stk38l|232533|serine/threonine kinase 38 like
mm9_v1_chr11_-_69499014_69499062	8.52971	UCCAGUU	BC069900|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	AK009514|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	NM_001159505|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	NM_023517|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	AK170351|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13
mm9_v1_chr6_+_83085799_83085880	8.52632	UCCAGUU	NM_001136227|Rtkn|20166|rhotekin	AK164943|Rtkn|20166|rhotekin	AK076155|Rtkn|20166|rhotekin
mm9_v1_chr5_+_115956682_115956792	8.22672	UCCAGUU	AK171226|Pxn|19303|paxillin	AK148060|Pxn|19303|paxillin	NM_011223|Pxn|19303|paxillin	NM_133915|Pxn|19303|paxillin	AK149933|Pxn|19303|paxillin	AK171436|Pxn|19303|paxillin	BC025493|Pxn|19303|paxillin	AK167299|Pxn|19303|paxillin	AF293882|Pxn|19303|paxillin
mm9_v1_chr16_+_17233664_17233756	8.04063	UCCAGUU	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr5_-_88128419_88128445	7.99731	UCCAGUU	BC019114|Csn2|12991|casein beta	BC013332|Csn2|12991|casein beta	BC092098|Csn2|12991|casein beta	BC020356|Csn2|12991|casein beta	BC050270|Csn2|12991|casein beta	BC020383|Csn2|12991|casein beta	BC021153|Csn2|12991|casein beta	BC057671|Csn2|12991|casein beta	BC080709|Csn2|12991|casein beta	AK164792|Csn2|12991|casein beta	AK164793|Csn2|12991|casein beta	AK085729|Csn2|12991|casein beta	AK021324|Csn2|12991|casein beta	AK021328|Csn2|12991|casein beta	AK052803|Csn2|12991|casein beta	AK052805|Csn2|12991|casein beta	AK052822|Csn2|12991|casein beta	AK085678|Csn2|12991|casein beta	AK085694|Csn2|12991|casein beta	AK085698|Csn2|12991|casein beta	AK085756|Csn2|12991|casein beta	AK142616|Csn2|12991|casein beta	AK142620|Csn2|12991|casein beta	AK142631|Csn2|12991|casein beta	AK142635|Csn2|12991|casein beta	AK164747|Csn2|12991|casein beta	AK164761|Csn2|12991|casein beta	AK164791|Csn2|12991|casein beta	AK164794|Csn2|12991|casein beta	NM_009972|Csn2|12991|casein beta	X04490|Csn2|12991|casein beta
mm9_v1_chr7_-_125635435_125635488	7.89339	UCCAGUU	AK134593|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK137678|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	NM_001033380|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr2_+_48669628_48669670	7.76571	UCCAGUU	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr3_-_27609279_27609407	7.75459	UCCAGUU	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr16_+_37868418_37868496	7.58953	UCCAGUU	AK090204|Lrrc58|320184|leucine rich repeat containing 58	AK049274|Lrrc58|320184|leucine rich repeat containing 58	NM_177093|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr1_+_59538966_59539075	7.58462	UCCAGUU	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr7_-_144506112_144506127	7.5499	UCCAGUU	AK220542|Ebf3|13593|early B-cell factor 3	NM_001113414|Ebf3|13593|early B-cell factor 3	NM_001113415|Ebf3|13593|early B-cell factor 3	NM_010096|Ebf3|13593|early B-cell factor 3
mm9_v1_chr16_+_45094163_45094171	7.45651	UCCAGUU	AK132178|Ccdc80|67896|coiled-coil domain containing 80	NM_026439|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr9_+_102620096_102620187	7.33976	UCCAGUU	AK141348|Amotl2|56332|angiomotin-like 2	AK164819|Amotl2|56332|angiomotin-like 2	NM_019764|Amotl2|56332|angiomotin-like 2	AK077535|Amotl2|56332|angiomotin-like 2	AK169419|Amotl2|56332|angiomotin-like 2	BC035201|Amotl2|56332|angiomotin-like 2	BC027824|Amotl2|56332|angiomotin-like 2
mm9_v1_chr12_+_79849918_79849954	7.19275	UCCAGUU	NM_019579|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr18_-_46887869_46888063	7.18623	UCCAGUU	BC013638|Cdo1|12583|cysteine dioxygenase 1, cytosolic	BC020375|Cdo1|12583|cysteine dioxygenase 1, cytosolic	NM_033037|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK004249|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK011032|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK149582|Cdo1|12583|cysteine dioxygenase 1, cytosolic
mm9_v1_chr14_+_8650470_8650537	7.14353	UCCAGUU	NM_134080|Flnb|286940|filamin, beta	AK047011|Flnb|286940|filamin, beta
mm9_v1_chr4_+_100449274_100449299	7.09718	UCCAGUU	AK080923|Cachd1|320508|cache domain containing 1	BC058676|Cachd1|320508|cache domain containing 1	NM_198037|Cachd1|320508|cache domain containing 1
mm9_v1_chr5_+_89316245_89316323	7.04551	UCCAGUU	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr7_-_17200285_17200343	7.02921	UCCAGUU	BC139459|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	BC139461|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147326|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147688|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	NM_172739|Grlf1|232906|glucocorticoid receptor DNA binding factor 1
mm9_v1_chr3_-_129672992_129673123	6.51944	UCCAGUU	AK152326|Ccdc109b|66815|coiled-coil domain containing 109B	AK018492|Ccdc109b|66815|coiled-coil domain containing 109B	AK150995|Ccdc109b|66815|coiled-coil domain containing 109B	AK154338|Ccdc109b|66815|coiled-coil domain containing 109B	AK150724|Ccdc109b|66815|coiled-coil domain containing 109B	AK151201|Ccdc109b|66815|coiled-coil domain containing 109B	AK151915|Ccdc109b|66815|coiled-coil domain containing 109B	BC049571|Ccdc109b|66815|coiled-coil domain containing 109B	NM_025779|Ccdc109b|66815|coiled-coil domain containing 109B
mm9_v1_chr4_+_137418151_137418162	6.49907	UCCAGUU	AK134088|Ece1|230857|endothelin converting enzyme 1	NM_199307|Ece1|230857|endothelin converting enzyme 1
mm9_v1_chr11_-_69509498_69509599	6.44642	UCCAGUU	AK170297|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK171014|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK044387|BC096441|619441|cDNA sequence BC096441	NM_001034097|BC096441|619441|cDNA sequence BC096441	NM_001159503|BC096441|619441|cDNA sequence BC096441	NM_011614|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr13_+_56805028_56805028	6.33389	UCCAGUU	AK082997|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164042|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr11_+_50038815_50038936	6.31429	UCCAGUU	AK155336|Mgat4b|103534|mannoside acetylglucosaminyltransferase 4, isoenzyme B	NM_145926|Mgat4b|103534|mannoside acetylglucosaminyltransferase 4, isoenzyme B
mm9_v1_chr9_+_122260733_122260862	6.27626	UCCAGUU	NM_026179|Abhd5|67469|abhydrolase domain containing 5	AK028453|Abhd5|67469|abhydrolase domain containing 5	AK004873|Abhd5|67469|abhydrolase domain containing 5	AK007421|Abhd5|67469|abhydrolase domain containing 5	AK008046|Abhd5|67469|abhydrolase domain containing 5	AK019488|Abhd5|67469|abhydrolase domain containing 5	AK050377|Abhd5|67469|abhydrolase domain containing 5	AK152717|Abhd5|67469|abhydrolase domain containing 5	BC037063|Abhd5|67469|abhydrolase domain containing 5	BC080714|Abhd5|67469|abhydrolase domain containing 5
mm9_v1_chr3_-_151500395_151500491	6.13885	UCCAGUU	AK087833|Ptgfr|19220|prostaglandin F receptor	D17433|Ptgfr|19220|prostaglandin F receptor	BC064794|Ptgfr|19220|prostaglandin F receptor	AK141760|Ptgfr|19220|prostaglandin F receptor	AK076450|Ptgfr|19220|prostaglandin F receptor	NM_008966|Ptgfr|19220|prostaglandin F receptor
mm9_v1_chrX_-_101017286_101017329	6.13262	UCCAGUU	AF045692|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2	NM_009197|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm9_v1_chr4_+_148892231_148892432	6.07974	UCCAGUU	AK036181|Ctnnbip1|67087|catenin beta interacting protein 1	NM_023465|Ctnnbip1|67087|catenin beta interacting protein 1	AK048258|Ctnnbip1|67087|catenin beta interacting protein 1	BC038253|Ctnnbip1|67087|catenin beta interacting protein 1	BC018436|Ctnnbip1|67087|catenin beta interacting protein 1	AB021261|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr5_-_140865121_140865262	6.07913	UCCAGUU	AK045061|Snx8|231834|sorting nexin 8	AK082871|Snx8|231834|sorting nexin 8	AK148429|Snx8|231834|sorting nexin 8	NM_172277|Snx8|231834|sorting nexin 8	BC037599|Snx8|231834|sorting nexin 8
mm9_v1_chr1_+_82583495_82583550	6.07004	UCCAGUU	AK086939|Col4a3|12828|collagen, type IV, alpha 3	NM_007734|Col4a3|12828|collagen, type IV, alpha 3	AF169387|Col4a3|12828|collagen, type IV, alpha 3
mm9_v1_chr11_+_96160484_96160526	6.01251	UCCAGUU	BC016893|Hoxb6|15414|homeobox B6	NM_008269|Hoxb6|15414|homeobox B6
mm9_v1_chr13_-_41582649_41582707	6.0	UCCAGUU	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr7_-_29383180_29383213	5.9145	UCCAGUU	AK129298|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4	NM_027470|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr4_-_53172748_53172872	5.91314	UCCAGUU	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr12_-_21379292_21379460	5.8688	UCCAGUU	AJ007365|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC114999|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69613|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138416|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138420|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC145270|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC026052|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149288|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK139471|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC048792|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK137693|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK165739|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC094655|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK144161|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK142441|Adam17|11491|a disintegrin and metallopeptidase domain 17	NM_009615|Adam17|11491|a disintegrin and metallopeptidase domain 17	AB021709|Adam17|11491|a disintegrin and metallopeptidase domain 17
mm9_v1_chr4_+_148919218_148919225	5.85223	UCCAGUU	AK003595|Ctnnbip1|67087|catenin beta interacting protein 1	NM_001141930|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr12_-_55963776_55963890	5.71414	UCCAGUU	AK147174|Cfl2|12632|cofilin 2, muscle	BC007138|Cfl2|12632|cofilin 2, muscle	AK004659|Cfl2|12632|cofilin 2, muscle	L29468|Cfl2|12632|cofilin 2, muscle	NM_007688|Cfl2|12632|cofilin 2, muscle
mm9_v1_chr13_+_56804370_56804503	5.68604	UCCAGUU	NM_008541|Smad5|17129|MAD homolog 5 (Drosophila)	AK018077|Smad5|17129|MAD homolog 5 (Drosophila)	AF063006|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164041|Smad5|17129|MAD homolog 5 (Drosophila)	U58993|Smad5|17129|MAD homolog 5 (Drosophila)	AK139765|Smad5|17129|MAD homolog 5 (Drosophila)	BC048233|Smad5|17129|MAD homolog 5 (Drosophila)	BC050001|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr2_-_102026486_102026616	5.57466	UCCAGUU	AK032208|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	AK029683|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	NM_178886|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138178|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC145174|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138177|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3
mm9_v1_chr14_-_122138082_122138150	5.57199	UCCAGUU	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr14_-_122097583_122097657	5.55682	UCCAGUU	BC157964|Dock9|105445|dedicator of cytokinesis 9	NM_001081039|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr9_-_58884114_58884258	5.42465	UCCAGUU	Y09535|Neo1|18007|neogenin	BC054540|Neo1|18007|neogenin	AK084609|Neo1|18007|neogenin	NM_001042752|Neo1|18007|neogenin	NM_008684|Neo1|18007|neogenin
mm9_v1_chr1_-_24107142_24107222	5.3798	UCCAGUU	AK149303|Fam135a|68187|family with sequence similarity 135, member A	AK165306|Fam135a|68187|family with sequence similarity 135, member A	NM_026604|Fam135a|68187|family with sequence similarity 135, member A
mm9_v1_chr7_+_75097142_75097267	5.37827	UCCAGUU	NM_010513|Igf1r|16001|insulin-like growth factor I receptor
mm9_v1_chr10_+_17443024_17443226	5.30227	UCCAGUU	AK131664|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AK133791|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_010828|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	BC057126|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U86445|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	Y15163|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm9_v1_chr11_+_115243203_115243359	5.30208	UCCAGUU	NM_001080929|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC144823|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC150668|Cdr2l|237988|cerebellar degeneration-related protein 2-like
mm9_v1_chr5_-_136410488_136410547	5.13226	UCCAGUU	NM_018871|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr18_+_83084023_83084023	4.96987	UCCAGUU	NM_001177464|Zfp516|329003|zinc finger protein 516
mm9_v1_chr1_+_196446006_196446022	4.93176	UCCAGUU	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr15_-_58654964_58655084	4.89665	UCCAGUU	BC096426|Tmem65|74868|transmembrane protein 65	NM_175212|Tmem65|74868|transmembrane protein 65	AK031886|Tmem65|74868|transmembrane protein 65	AK015335|Tmem65|74868|transmembrane protein 65
mm9_v1_chr4_-_115840142_115840210	4.86601	UCCAGUU	BC003448|Tspan1|66805|tetraspanin 1	AK007428|Tspan1|66805|tetraspanin 1	AK078869|Tspan1|66805|tetraspanin 1	AK162521|Tspan1|66805|tetraspanin 1	NM_133681|Tspan1|66805|tetraspanin 1
mm9_v1_chr18_-_16967557_16967557	4.76206	UCCAGUU	NM_007664|Cdh2|12558|cadherin 2
mm9_v1_chr1_+_39957733_39957796	4.759	UCCAGUU	NM_008696|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr6_+_83087016_83087103	4.67672	UCCAGUU	NM_009106|Rtkn|20166|rhotekin	NM_133641|Rtkn|20166|rhotekin	U54638|Rtkn|20166|rhotekin	BC013820|Rtkn|20166|rhotekin
mm9_v1_chr19_+_53751795_53751795	4.66613	UCCAGUU	AK142175|Rbm20|73713|RNA binding motif protein 20	NM_001170847|Rbm20|73713|RNA binding motif protein 20
mm9_v1_chr1_+_174430359_174430439	4.54707	UCCAGUU	AK151576|Tagln2|21346|transgelin 2	NM_178598|Tagln2|21346|transgelin 2	AK167395|Tagln2|21346|transgelin 2	BC009076|Tagln2|21346|transgelin 2	AK167922|Tagln2|21346|transgelin 2	AF149291|Tagln2|21346|transgelin 2	AK171088|Tagln2|21346|transgelin 2	AK172892|Tagln2|21346|transgelin 2	AF465519|Tagln2|21346|transgelin 2
mm9_v1_chr5_-_125821418_125821488	4.50692	UCCAGUU	AK169906|Scarb1|20778|scavenger receptor class B, member 1	AK171602|Scarb1|20778|scavenger receptor class B, member 1	BC004656|Scarb1|20778|scavenger receptor class B, member 1	NM_016741|Scarb1|20778|scavenger receptor class B, member 1	AK028191|Scarb1|20778|scavenger receptor class B, member 1	AK154933|Scarb1|20778|scavenger receptor class B, member 1
mm9_v1_chr19_-_44144244_44144286	4.47627	UCCAGUU	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr16_+_17452048_17452310	4.47417	UCCAGUU	AK052315|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	AK048641|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_007764|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	AK163981|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	BC023080|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X90648|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	BC131984|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	BC131986|Crkl|12929|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm9_v1_chr7_-_35070627_35070627	4.45876	UCCAGUU	AK076994|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene	NM_172741|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr13_-_41454358_41454379	4.44554	UCCAGUU	AK054179|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK033729|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_017464|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr2_-_104656852_104656885	4.35791	UCCAGUU	NM_001123327|Qser1|99003|glutamine and serine rich 1
mm9_v1_chr3_-_84024766_84024812	4.25141	UCCAGUU	BC058668|Trim2|80890|tripartite motif-containing 2	AB043550|Trim2|80890|tripartite motif-containing 2	AK046887|Trim2|80890|tripartite motif-containing 2	AK147395|Trim2|80890|tripartite motif-containing 2	AK039741|Trim2|80890|tripartite motif-containing 2	AK045410|Trim2|80890|tripartite motif-containing 2	AK083057|Trim2|80890|tripartite motif-containing 2	NM_030706|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr9_-_101154160_101154163	4.20626	UCCAGUU	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr5_+_28397902_28397951	4.12794	UCCAGUU	AK135941|Insig1|231070|insulin induced gene 1	AK135989|Insig1|231070|insulin induced gene 1	AK139913|Insig1|231070|insulin induced gene 1	AK151186|Insig1|231070|insulin induced gene 1	AK088380|Insig1|231070|insulin induced gene 1	AF527630|Insig1|231070|insulin induced gene 1	BC132167|Insig1|231070|insulin induced gene 1	BC132499|Insig1|231070|insulin induced gene 1	BC079559|Insig1|231070|insulin induced gene 1	NM_153526|Insig1|231070|insulin induced gene 1
mm9_v1_chr17_+_78599556_78599594	4.09751	UCCAGUU	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr2_+_152987036_152987075	4.06404	UCCAGUU	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr10_-_126558207_126558220	4.00639	UCCAGUU	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr6_+_100783598_100783865	3.99309	UCCAGUU	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr11_+_83116148_83116241	3.99016	UCCAGUU	AK138434|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_001035854|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_027915|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK030505|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	BC046772|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK032617|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr9_-_63605745_63605800	3.96689	UCCAGUU	AK048626|Smad3|17127|MAD homolog 3 (Drosophila)	NM_016769|Smad3|17127|MAD homolog 3 (Drosophila)
mm9_v1_chr17_-_71351775_71351878	3.7891	UCCAGUU	NM_026064|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene
mm9_v1_chr7_-_26035683_26035785	3.6535	UCCAGUU	BC063092|Erf|13875|Ets2 repressor factor	BC053045|Erf|13875|Ets2 repressor factor	BC059176|Erf|13875|Ets2 repressor factor	AK159225|Erf|13875|Ets2 repressor factor	NM_010155|Erf|13875|Ets2 repressor factor
mm9_v1_chr9_-_101101334_101101402	3.64739	UCCAGUU	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr17_-_68353397_68353499	3.60714	UCCAGUU	AK141901|Arhgap28|268970|Rho GTPase activating protein 28	BC066788|Arhgap28|268970|Rho GTPase activating protein 28	NM_172964|Arhgap28|268970|Rho GTPase activating protein 28	AK087523|Arhgap28|268970|Rho GTPase activating protein 28
mm9_v1_chr2_+_25258568_25258631	3.60363	UCCAGUU	BC003320|Npdc1|18146|neural proliferation, differentiation and control gene 1	NM_008721|Npdc1|18146|neural proliferation, differentiation and control gene 1
mm9_v1_chr11_-_96690784_96690815	3.57866	UCCAGUU	AK154167|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK085935|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130450|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr8_-_90483392_90483493	3.53763	UCCAGUU	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chr11_-_97049185_97049278	3.53665	UCCAGUU	BC055115|Kpnb1|16211|karyopherin (importin) beta 1	AK077709|Kpnb1|16211|karyopherin (importin) beta 1	NM_008379|Kpnb1|16211|karyopherin (importin) beta 1	AK147175|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chrX_-_138825032_138825081	3.53428	UCCAGUU	AK054387|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_001033600|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_019477|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_207625|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr10_-_13108775_13108775	3.49903	UCCAGUU	AK139466|Phactr2|215789|phosphatase and actin regulator 2	NM_001195066|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr6_-_127100954_127101069	3.49848	UCCAGUU	M86182|Ccnd2|12444|cyclin D2	AK007904|Ccnd2|12444|cyclin D2	AK011412|Ccnd2|12444|cyclin D2	AK077367|Ccnd2|12444|cyclin D2	AK147345|Ccnd2|12444|cyclin D2	AK160751|Ccnd2|12444|cyclin D2	AK168954|Ccnd2|12444|cyclin D2	BC049086|Ccnd2|12444|cyclin D2	M83749|Ccnd2|12444|cyclin D2	NM_009829|Ccnd2|12444|cyclin D2
mm9_v1_chr16_+_94791713_94791812	3.49497	UCCAGUU	NM_007890|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr3_+_126299858_126299959	3.48054	UCCAGUU	AK220516|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_001025438|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_001025439|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_023813|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK032524|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK042722|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK044872|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK142435|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK157736|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK145106|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	BC057103|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta
mm9_v1_chr14_-_122196929_122196955	3.45401	UCCAGUU	NM_134074|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr11_-_96691261_96691289	3.44642	UCCAGUU	AK152040|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK153529|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_008686|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr5_-_86601756_86601789	3.44153	UCCAGUU	AK053583|Uba6|231380|ubiquitin-like modifier activating enzyme 6	BC063048|Uba6|231380|ubiquitin-like modifier activating enzyme 6	NM_172712|Uba6|231380|ubiquitin-like modifier activating enzyme 6	AK086539|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr2_-_104334610_104334646	3.38708	UCCAGUU	NM_001145824|Hipk3|15259|homeodomain interacting protein kinase 3	NM_010434|Hipk3|15259|homeodomain interacting protein kinase 3
mm9_v1_chr9_+_106356125_106356294	3.3734	UCCAGUU	NM_021567|Pcbp4|59092|poly(rC) binding protein 4	AK004580|Pcbp4|59092|poly(rC) binding protein 4	AK005383|Pcbp4|59092|poly(rC) binding protein 4	AK077632|Pcbp4|59092|poly(rC) binding protein 4	AK082005|Pcbp4|59092|poly(rC) binding protein 4	BC010694|Pcbp4|59092|poly(rC) binding protein 4	AF176328|Pcbp4|59092|poly(rC) binding protein 4
mm9_v1_chr5_+_139676589_139676634	3.31979	UCCAGUU	AK014585|Sun1|77053|Sad1 and UNC84 domain containing 1	AK036187|Sun1|77053|Sad1 and UNC84 domain containing 1	AK161959|Sun1|77053|Sad1 and UNC84 domain containing 1	AK162533|Sun1|77053|Sad1 and UNC84 domain containing 1	AK167686|Sun1|77053|Sad1 and UNC84 domain containing 1	BC048156|Sun1|77053|Sad1 and UNC84 domain containing 1	BC047928|Sun1|77053|Sad1 and UNC84 domain containing 1	NM_024451|Sun1|77053|Sad1 and UNC84 domain containing 1	AK160281|Sun1|77053|Sad1 and UNC84 domain containing 1
mm9_v1_chr11_-_70832737_70832807	3.22083	UCCAGUU	AF208064|Derl2|116891|Der1-like domain family, member 2	AK083632|Derl2|116891|Der1-like domain family, member 2	BC005682|Derl2|116891|Der1-like domain family, member 2	AK083725|Derl2|116891|Der1-like domain family, member 2	AK048627|Derl2|116891|Der1-like domain family, member 2	AK077659|Derl2|116891|Der1-like domain family, member 2	AK082564|Derl2|116891|Der1-like domain family, member 2	NM_033562|Derl2|116891|Der1-like domain family, member 2	AK090105|Derl2|116891|Der1-like domain family, member 2
mm9_v1_chr15_+_40486577_40486623	3.17594	UCCAGUU	AK046521|Zfpm2|22762|zinc finger protein, multitype 2	NM_011766|Zfpm2|22762|zinc finger protein, multitype 2	AF125166|Zfpm2|22762|zinc finger protein, multitype 2
mm9_v1_chr3_-_142544883_142544984	3.16997	UCCAGUU	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chr9_-_21602942_21603000	3.1315	UCCAGUU	BC010245|Kank2|235041|KN motif and ankyrin repeat domains 2	AK045492|Kank2|235041|KN motif and ankyrin repeat domains 2	BC006647|Kank2|235041|KN motif and ankyrin repeat domains 2	AK031324|Kank2|235041|KN motif and ankyrin repeat domains 2	AK049288|Kank2|235041|KN motif and ankyrin repeat domains 2	NM_145611|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr19_+_38911056_38911166	3.10046	UCCAGUU	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr9_-_79566271_79566499	2.99677	UCCAGUU	U25652|Col12a1|12816|collagen, type XII, alpha 1	NM_007730|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr6_-_115944822_115945034	2.99349	UCCAGUU	AY688678|Plxnd1|67784|plexin D1	AK147513|Plxnd1|67784|plexin D1	NM_026376|Plxnd1|67784|plexin D1
mm9_v1_chr13_-_108680257_108680267	2.83249	UCCAGUU	NM_145456|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr9_+_74800828_74800859	2.72735	UCCAGUU	BC060215|BC031353|235493|cDNA sequence BC031353	NM_001113283|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr7_-_117758413_117758468	2.69294	UCCAGUU	BC048706|Sbf2|319934|SET binding factor 2	AK080963|Sbf2|319934|SET binding factor 2	AK087396|Sbf2|319934|SET binding factor 2	AK080952|Sbf2|319934|SET binding factor 2	NM_177324|Sbf2|319934|SET binding factor 2	AK046622|Sbf2|319934|SET binding factor 2
mm9_v1_chr9_-_110379093_110379197	2.65703	UCCAGUU	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr1_+_36125177_36125272	2.65152	UCCAGUU	AK144809|Hs6st1|50785|heparan sulfate 6-O-sulfotransferase 1	BC052316|Hs6st1|50785|heparan sulfate 6-O-sulfotransferase 1	NM_015818|Hs6st1|50785|heparan sulfate 6-O-sulfotransferase 1	AB024566|Hs6st1|50785|heparan sulfate 6-O-sulfotransferase 1
mm9_v1_chr4_+_129497720_129497746	2.59753	UCCAGUU	NM_008974|Ptp4a2|19244|protein tyrosine phosphatase 4a2
mm9_v1_chr7_-_91300359_91300442	2.51301	UCCAGUU	BC018511|Fam108c|70178|family with sequence similarity 108, member C	NM_133722|Fam108c|70178|family with sequence similarity 108, member C
mm9_v1_chr10_-_13043959_13044096	2.48923	UCCAGUU	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr18_+_69505374_69505487	2.45923	UCCAGUU	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr11_+_45869473_45869501	2.45789	UCCAGUU	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chrX_-_101176600_101176631	2.44708	UCCAGUU	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr6_-_39156706_39156787	2.41944	UCCAGUU	AK136238|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042834|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	NM_001033430|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042327|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr4_+_107107195_107107323	2.39145	UCCAGUU	AF486579|Glis1|230587|GLIS family zinc finger 1	NM_147221|Glis1|230587|GLIS family zinc finger 1
mm9_v1_chr1_+_182656137_182656231	2.21994	UCCAGUU	AF022770|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK030371|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	NM_133225|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK167272|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK168799|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC050121|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC060602|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr8_-_35040277_35040351	2.12721	UCCAGUU	AK041118|Rbpms|19663|RNA binding protein gene with multiple splicing	AK079238|Rbpms|19663|RNA binding protein gene with multiple splicing	BC030397|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042674|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042675|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_019733|Rbpms|19663|RNA binding protein gene with multiple splicing
mm9_v1_chr8_-_66684789_66684808	2.09154	UCCAGUU	NM_009390|Tll1|21892|tolloid-like	U34042|Tll1|21892|tolloid-like	AK080919|Tll1|21892|tolloid-like
mm9_v1_chr11_-_18918923_18918971	2.06252	UCCAGUU	AK032947|Meis1|17268|Meis homeobox 1	AK049720|Meis1|17268|Meis homeobox 1	BC023689|Meis1|17268|Meis homeobox 1	AK168684|Meis1|17268|Meis homeobox 1	AK134321|Meis1|17268|Meis homeobox 1	AK140748|Meis1|17268|Meis homeobox 1	NM_001193271|Meis1|17268|Meis homeobox 1	NM_010789|Meis1|17268|Meis homeobox 1
mm9_v1_chr10_-_13194201_13194201	2.04287	UCCAGUU	BC012871|Phactr2|215789|phosphatase and actin regulator 2	NM_001195065|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr14_+_59820064_59820146	2.03316	UCCAGUU	NM_027764|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK089923|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK088299|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	BC067005|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK033501|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr18_+_69504145_69504185	2.02837	UCCAGUU	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr13_+_47289371_47289389	1.96885	UCCAGUU	AK052846|Rnf144b|218215|ring finger protein 144B	NM_001170643|Rnf144b|218215|ring finger protein 144B	AK040939|Rnf144b|218215|ring finger protein 144B	BC025007|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr13_+_119503505_119503505	1.95747	UCCAGUU	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr5_+_122161617_122161617	1.9569	UCCAGUU	AF041472|Atxn2|20239|ataxin 2	NM_009125|Atxn2|20239|ataxin 2
mm9_v1_chr2_-_150835067_150835133	1.95608	UCCAGUU	AK129253|Ninl|78177|ninein-like	BC067071|Ninl|78177|ninein-like	NM_207204|Ninl|78177|ninein-like
mm9_v1_chr9_-_35007875_35007875	1.95206	UCCAGUU	AK080135|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	NM_001177845|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
mm9_v1_chr13_+_37980739_37980739	1.91531	UCCAGUU	NM_001177869|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr1_+_44176812_44176851	1.91113	UCCAGUU	AK047404|Bivm|246229|basic, immunoglobulin-like variable motif containing	NM_144558|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK032375|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK034329|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr12_+_70473032_70473193	1.90675	UCCAGUU	BC083112|Arf6|11845|ADP-ribosylation factor 6	NM_007481|Arf6|11845|ADP-ribosylation factor 6	AK156960|Arf6|11845|ADP-ribosylation factor 6	BC003478|Arf6|11845|ADP-ribosylation factor 6	D87903|Arf6|11845|ADP-ribosylation factor 6
mm9_v1_chr11_+_115626733_115626761	1.87181	UCCAGUU	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr9_-_67407509_67407509	1.86757	UCCAGUU	NM_001081242|Tln2|70549|talin 2
mm9_v1_chr16_+_14361637_14361715	1.80295	UCCAGUU	AK029876|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_008576|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK150015|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK152781|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	BC090617|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AF022908|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm9_v1_chr9_-_35007458_35007549	1.80238	UCCAGUU	AF378130|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	AK168494|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	AK036431|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	AK151117|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	NM_001177847|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	NM_001177846|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein	NM_054096|Tirap|117149|toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
mm9_v1_chr9_+_53698053_53698076	1.76522	UCCAGUU	AK009005|Sln|66402|sarcolipin	AK008896|Sln|66402|sarcolipin	NM_025540|Sln|66402|sarcolipin	AK008863|Sln|66402|sarcolipin	BC028496|Sln|66402|sarcolipin
mm9_v1_chr2_-_103637096_103637239	1.71278	UCCAGUU	AB373955|Caprin1|53872|cell cycle associated protein 1	AK141992|Caprin1|53872|cell cycle associated protein 1	AK166461|Caprin1|53872|cell cycle associated protein 1	U27838|Caprin1|53872|cell cycle associated protein 1	AK148203|Caprin1|53872|cell cycle associated protein 1	AK168676|Caprin1|53872|cell cycle associated protein 1	NM_001111289|Caprin1|53872|cell cycle associated protein 1	NM_001111290|Caprin1|53872|cell cycle associated protein 1	NM_001111292|Caprin1|53872|cell cycle associated protein 1
mm9_v1_chr9_-_59334089_59334191	1.7072	UCCAGUU	BC038034|Arih1|23806|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)	NM_019927|Arih1|23806|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm9_v1_chr3_+_104442568_104442606	1.70302	UCCAGUU	AK033516|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK079379|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK088762|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK161701|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK162682|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK166606|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	NM_009196|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	BC014777|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AF058055|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm9_v1_chr15_-_27955602_27955621	1.68276	UCCAGUU	NM_001081302|Trio|223435|triple functional domain (PTPRF interacting)
mm9_v1_chr18_-_63851841_63852091	1.68174	UCCAGUU	AF052660|Txnl1|53382|thioredoxin-like 1	AK144211|Txnl1|53382|thioredoxin-like 1	AK150326|Txnl1|53382|thioredoxin-like 1	AK168712|Txnl1|53382|thioredoxin-like 1	AK150887|Txnl1|53382|thioredoxin-like 1	AK152101|Txnl1|53382|thioredoxin-like 1	AK150983|Txnl1|53382|thioredoxin-like 1	AK167954|Txnl1|53382|thioredoxin-like 1	AK051698|Txnl1|53382|thioredoxin-like 1	AK029807|Txnl1|53382|thioredoxin-like 1	NM_016792|Txnl1|53382|thioredoxin-like 1	BC061123|Txnl1|53382|thioredoxin-like 1
mm9_v1_chrX_-_108651553_108651553	1.65851	UCCAGUU	NM_025949|Rps6ka6|67071|ribosomal protein S6 kinase polypeptide 6
mm9_v1_chr9_-_97011440_97011575	1.63251	UCCAGUU	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr4_+_106584074_106584164	1.63008	UCCAGUU	AK017711|Ssbp3|72475|single-stranded DNA binding protein 3	NM_023672|Ssbp3|72475|single-stranded DNA binding protein 3	NM_198438|Ssbp3|72475|single-stranded DNA binding protein 3	AK011853|Ssbp3|72475|single-stranded DNA binding protein 3	BC035475|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr7_+_4088622_4088685	1.62509	UCCAGUU	AK170629|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK034310|Leng8|232798|leukocyte receptor cluster (LRC) member 8	NM_172736|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK085304|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK158293|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC066768|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC042658|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC041775|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chr6_+_83187368_83187368	1.58848	UCCAGUU	NM_001166067|Slc4a5|232156|solute carrier family 4, sodium bicarbonate cotransporter, member 5
mm9_v1_chr9_+_74823917_74823980	1.58546	UCCAGUU	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr12_+_80130149_80130201	1.58446	UCCAGUU	NM_181073|Plekhh1|211945|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	AK122464|Plekhh1|211945|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm9_v1_chr16_+_96583361_96583389	1.57616	UCCAGUU	NM_001177887|Igsf5|72058|immunoglobulin superfamily, member 5	AK086973|Igsf5|72058|immunoglobulin superfamily, member 5	NM_001177886|Igsf5|72058|immunoglobulin superfamily, member 5	NM_028078|Igsf5|72058|immunoglobulin superfamily, member 5
mm9_v1_chr2_-_37278415_37278506	1.56613	UCCAGUU	BC117951|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	BC117952|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	AK053071|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	NM_001100591|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr18_+_83080270_83080270	1.56409	UCCAGUU	NM_183033|Zfp516|329003|zinc finger protein 516
mm9_v1_chr9_-_45792865_45792953	1.50361	UCCAGUU	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr3_-_9610062_9610137	1.50289	UCCAGUU	AF292939|Zfp704|170753|zinc finger protein 704	NM_133218|Zfp704|170753|zinc finger protein 704
mm9_v1_chr19_-_17912073_17912162	1.4799	UCCAGUU	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr4_+_124663673_124663851	1.45843	UCCAGUU	AB016768|Rspo1|192199|R-spondin homolog (Xenopus laevis)	NM_138683|Rspo1|192199|R-spondin homolog (Xenopus laevis)	AK132277|Rspo1|192199|R-spondin homolog (Xenopus laevis)
mm9_v1_chr1_-_121545442_121545576	1.45004	UCCAGUU	AK034676|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK047523|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK173198|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	BC011476|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044959|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044996|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK079301|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK161141|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK027983|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK037024|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK136125|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK040354|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK167449|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_001113416|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_145506|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr3_+_93123668_93123671	1.38784	UCCAGUU	AK041026|Hrnr|68723|hornerin	NM_133698|Hrnr|68723|hornerin
mm9_v1_chr17_-_10512217_10512250	1.38004	UCCAGUU	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr4_+_148178500_148178594	1.33193	UCCAGUU	BC075673|Casz1|69743|castor homolog 1, zinc finger (Drosophila)	NM_001159344|Casz1|69743|castor homolog 1, zinc finger (Drosophila)	NM_027195|Casz1|69743|castor homolog 1, zinc finger (Drosophila)	AK048565|Casz1|69743|castor homolog 1, zinc finger (Drosophila)	AK144492|Casz1|69743|castor homolog 1, zinc finger (Drosophila)
mm9_v1_chr10_+_98725858_98725868	1.31112	UCCAGUU	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr3_+_95908422_95908559	1.30961	UCCAGUU	AK044701|Otud7b|229603|OTU domain containing 7B	NM_001025613|Otud7b|229603|OTU domain containing 7B	NM_001025614|Otud7b|229603|OTU domain containing 7B	AK078327|Otud7b|229603|OTU domain containing 7B	BC141397|Otud7b|229603|OTU domain containing 7B	BC141398|Otud7b|229603|OTU domain containing 7B
mm9_v1_chr15_-_90880241_90880381	1.27288	UCCAGUU	AF202892|Kif21a|16564|kinesin family member 21A	BC060698|Kif21a|16564|kinesin family member 21A	BC062896|Kif21a|16564|kinesin family member 21A	AK163536|Kif21a|16564|kinesin family member 21A	AK047880|Kif21a|16564|kinesin family member 21A	AK147436|Kif21a|16564|kinesin family member 21A	AK008213|Kif21a|16564|kinesin family member 21A	AK047350|Kif21a|16564|kinesin family member 21A	NM_001109040|Kif21a|16564|kinesin family member 21A	NM_001109041|Kif21a|16564|kinesin family member 21A	NM_001109042|Kif21a|16564|kinesin family member 21A	NM_016705|Kif21a|16564|kinesin family member 21A	AK019525|Kif21a|16564|kinesin family member 21A
mm9_v1_chr4_+_154865439_154865649	1.2302	UCCAGUU	NM_001160016|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	NM_001160017|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	NM_008142|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK156101|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	BC013058|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK163844|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr11_-_95926589_95926740	1.22814	UCCAGUU	AK077793|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK149770|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	NM_172300|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr6_+_129483206_129483210	1.22393	UCCAGUU	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr16_+_32608981_32609106	1.19454	UCCAGUU	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr14_-_73109722_73109912	1.19173	UCCAGUU	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr11_-_5161536_5161672	1.16911	UCCAGUU	BC049771|Kremen1|84035|kringle containing transmembrane protein 1	AB059617|Kremen1|84035|kringle containing transmembrane protein 1	BC082546|Kremen1|84035|kringle containing transmembrane protein 1	NM_032396|Kremen1|84035|kringle containing transmembrane protein 1	AK081707|Kremen1|84035|kringle containing transmembrane protein 1	BC138464|Kremen1|84035|kringle containing transmembrane protein 1	BC138465|Kremen1|84035|kringle containing transmembrane protein 1	AK141321|Kremen1|84035|kringle containing transmembrane protein 1
mm9_v1_chr15_+_101904203_101904238	1.1534	UCCAGUU	NM_145625|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr14_+_69647294_69647485	1.10537	UCCAGUU	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr5_-_4104696_4104696	1.08425	UCCAGUU	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr15_+_57526212_57526467	1.07819	UCCAGUU	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr12_+_85455277_85455306	1.07723	UCCAGUU	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr11_-_94361285_94361312	1.07147	UCCAGUU	NM_027984|Epn3|71889|epsin 3
mm9_v1_chr14_-_103498719_103498784	1.05941	UCCAGUU	AK142007|Fbxl3|50789|F-box and leucine-rich repeat protein 3	NM_015822|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080863|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080802|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chr1_-_138242666_138242682	1.05688	UCCAGUU	AK016014|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK028542|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK053092|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	NM_001081360|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1
mm9_v1_chr10_+_127814144_127814228	1.05373	UCCAGUU	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr13_-_24372584_24372663	1.02904	UCCAGUU	BC150819|Lrrc16a|68732|leucine rich repeat containing 16A	AK051570|Lrrc16a|68732|leucine rich repeat containing 16A	NM_026825|Lrrc16a|68732|leucine rich repeat containing 16A	AY437876|Lrrc16a|68732|leucine rich repeat containing 16A
mm9_v1_chr10_+_51953390_51953445	1.02812	UCCAGUU	AK016485|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	NM_025705|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	AK157211|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1
mm9_v1_chr9_-_75407338_75407491	1.02174	UCCAGUU	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr14_-_32390502_32390568	0.995997	UCCAGUU	BC107386|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC107387|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK134212|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_009937|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
mm9_v1_chr13_+_90229271_90229367	0.974957	UCCAGUU	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr16_+_44139908_44140168	0.974301	UCCAGUU	NM_028108|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK167141|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK168394|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC057117|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK135658|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK156791|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK011160|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK145345|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC046283|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC004086|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK198408|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC055846|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm9_v1_chr16_+_23107538_23107551	0.972895	UCCAGUU	NM_001123037|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_001123038|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_013506|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr4_-_131767968_131768170	0.929337	UCCAGUU	AK083882|Ythdf2|213541|YTH domain family 2	BC028994|Ythdf2|213541|YTH domain family 2	BC014797|Ythdf2|213541|YTH domain family 2	AK150350|Ythdf2|213541|YTH domain family 2	AK150669|Ythdf2|213541|YTH domain family 2	AK151392|Ythdf2|213541|YTH domain family 2	AK151862|Ythdf2|213541|YTH domain family 2	AK159548|Ythdf2|213541|YTH domain family 2	AK031616|Ythdf2|213541|YTH domain family 2	AK144209|Ythdf2|213541|YTH domain family 2	AK034655|Ythdf2|213541|YTH domain family 2	NM_145393|Ythdf2|213541|YTH domain family 2
mm9_v1_chr10_-_9394979_9395005	0.924178	UCCAGUU	AK132444|Samd5|320825|sterile alpha motif domain containing 5	AK087498|Samd5|320825|sterile alpha motif domain containing 5	NM_177271|Samd5|320825|sterile alpha motif domain containing 5
mm9_v1_chr13_+_93381086_93381215	0.893416	UCCAGUU	AK165334|Serinc5|218442|serine incorporator 5	BC049189|Serinc5|218442|serine incorporator 5	BC062131|Serinc5|218442|serine incorporator 5	NM_172588|Serinc5|218442|serine incorporator 5	AK037699|Serinc5|218442|serine incorporator 5	AK163675|Serinc5|218442|serine incorporator 5	AB029501|Serinc5|218442|serine incorporator 5
mm9_v1_chr18_+_66618186_66618270	0.882064	UCCAGUU	AK143990|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK169914|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK043856|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK088556|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AB041230|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	NM_021451|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	BC050821|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1
mm9_v1_chr11_-_96685326_96685440	0.870682	UCCAGUU	AK148471|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130453|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130454|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130451|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130452|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr15_+_7760845_7761031	0.854548	UCCAGUU	D88264|Gdnf|14573|glial cell line derived neurotrophic factor	U75532|Gdnf|14573|glial cell line derived neurotrophic factor	NM_010275|Gdnf|14573|glial cell line derived neurotrophic factor	U37459|Gdnf|14573|glial cell line derived neurotrophic factor	BC119031|Gdnf|14573|glial cell line derived neurotrophic factor
mm9_v1_chr14_-_31166671_31166671	0.847067	UCCAGUU	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr1_-_135557934_135557977	0.800552	UCCAGUU	AK148376|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK078105|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK145740|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK167700|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK041148|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK017663|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK035705|Zbed6|667118|zinc finger, BED domain containing 6	NM_144530|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr13_-_30077931_30077931	0.793361	UCCAGUU	AK133828|E2f3|13557|E2F transcription factor 3	NM_010093|E2f3|13557|E2F transcription factor 3
mm9_v1_chr15_+_99800504_99800504	0.787793	UCCAGUU	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr3_+_102931478_102931478	0.758049	UCCAGUU	BC060666|Dennd2c|329727|DENN/MADD domain containing 2C	NM_177857|Dennd2c|329727|DENN/MADD domain containing 2C
mm9_v1_chr3_+_9250566_9250566	0.752821	UCCAGUU	NM_177660|Zbtb10|229055|zinc finger and BTB domain containing 10
mm9_v1_chr19_+_5689130_5689130	0.751545	UCCAGUU	BC095963|Map3k11|26403|mitogen-activated protein kinase kinase kinase 11	NM_022012|Map3k11|26403|mitogen-activated protein kinase kinase kinase 11
mm9_v1_chr14_-_98568744_98568810	0.67448	UCCAGUU	AF129510|Dach1|13134|dachshund 1 (Drosophila)	BC052005|Dach1|13134|dachshund 1 (Drosophila)	BC059934|Dach1|13134|dachshund 1 (Drosophila)	NM_001038610|Dach1|13134|dachshund 1 (Drosophila)	NM_007826|Dach1|13134|dachshund 1 (Drosophila)
mm9_v1_chr13_+_49282844_49282955	0.672868	UCCAGUU	AK159111|Ninj1|18081|ninjurin 1	AK077602|Ninj1|18081|ninjurin 1	AK171973|Ninj1|18081|ninjurin 1	AK160045|Ninj1|18081|ninjurin 1	AK155741|Ninj1|18081|ninjurin 1	BC118937|Ninj1|18081|ninjurin 1	NM_013610|Ninj1|18081|ninjurin 1	U91513|Ninj1|18081|ninjurin 1	BC049600|Ninj1|18081|ninjurin 1
mm9_v1_chr15_+_102300972_102301062	0.669093	UCCAGUU	NM_001103165|Pcbp2|18521|poly(rC) binding protein 2	NM_001103166|Pcbp2|18521|poly(rC) binding protein 2	NM_001174073|Pcbp2|18521|poly(rC) binding protein 2	NM_011042|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chrX_-_45561726_45561881	0.617698	UCCAGUU	BC042618|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK035745|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK079248|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032252|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032233|Zdhhc9|208884|zinc finger, DHHC domain containing 9	NM_172465|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr4_-_108506131_108506262	0.615522	UCCAGUU	BC024920|Btf3l4|70533|basic transcription factor 3-like 4	BC058282|Btf3l4|70533|basic transcription factor 3-like 4	AK011367|Btf3l4|70533|basic transcription factor 3-like 4	AK167256|Btf3l4|70533|basic transcription factor 3-like 4	BC138215|Btf3l4|70533|basic transcription factor 3-like 4	BC138216|Btf3l4|70533|basic transcription factor 3-like 4	BC024612|Btf3l4|70533|basic transcription factor 3-like 4	AK013120|Btf3l4|70533|basic transcription factor 3-like 4	AK076283|Btf3l4|70533|basic transcription factor 3-like 4	NM_027453|Btf3l4|70533|basic transcription factor 3-like 4	AK004239|Btf3l4|70533|basic transcription factor 3-like 4
mm9_v1_chr19_+_8972532_8972606	0.566276	UCCAGUU	AK028655|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK030722|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK081915|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK149686|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC094437|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC117889|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	NM_008060|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	U92793|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK043606|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC128069|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC117888|Ganab|14376|alpha glucosidase 2 alpha neutral subunit
mm9_v1_chr8_+_112302530_112302620	0.545096	UCCAGUU	AK036387|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	NM_009677|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	X54424|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	AK145821|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC052703|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC054535|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit
mm9_v1_chr10_-_62666659_62666699	0.542138	UCCAGUU	AK036458|Mypn|68802|myopalladin	AK220521|Mypn|68802|myopalladin	NM_182992|Mypn|68802|myopalladin
mm9_v1_chr13_+_47218048_47218098	0.539864	UCCAGUU	AK038964|Rnf144b|218215|ring finger protein 144B	AK053529|Rnf144b|218215|ring finger protein 144B	NM_146042|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr1_+_23768764_23768872	0.497307	UCCAGUU	AK052640|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	NM_172124|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AB055902|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK048146|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK220433|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC056368|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC058082|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm9_v1_chr5_-_102498929_102498975	0.489613	UCCAGUU	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr11_-_103558971_103559046	0.480937	UCCAGUU	AF007550|Gosr2|56494|golgi SNAP receptor complex member 2	BC051253|Gosr2|56494|golgi SNAP receptor complex member 2	AK005697|Gosr2|56494|golgi SNAP receptor complex member 2	AK002556|Gosr2|56494|golgi SNAP receptor complex member 2	BC008525|Gosr2|56494|golgi SNAP receptor complex member 2	AK013052|Gosr2|56494|golgi SNAP receptor complex member 2	AK150004|Gosr2|56494|golgi SNAP receptor complex member 2	NM_019650|Gosr2|56494|golgi SNAP receptor complex member 2
mm9_v1_chr19_+_29064938_29065019	0.456986	UCCAGUU	AK078872|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK161465|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK018787|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK080238|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK012312|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	NM_025950|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	BC031761|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK038578|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK079556|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr14_-_100548982_100549014	0.446515	UCCAGUU	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chrX_-_7318412_7318449	0.4064	UCCAGUU	BC053918|Ccdc120|54648|coiled-coil domain containing 120	NM_207202|Ccdc120|54648|coiled-coil domain containing 120
mm9_v1_chr11_-_77421308_77421363	0.401331	UCCAGUU	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr1_+_153191613_153191716	0.400231	UCCAGUU	AL355706|Ivns1abp|117198|influenza virus NS1A binding protein	NM_001039511|Ivns1abp|117198|influenza virus NS1A binding protein	NM_001039512|Ivns1abp|117198|influenza virus NS1A binding protein	NM_054102|Ivns1abp|117198|influenza virus NS1A binding protein	AB055737|Ivns1abp|117198|influenza virus NS1A binding protein	AB055738|Ivns1abp|117198|influenza virus NS1A binding protein	AK145071|Ivns1abp|117198|influenza virus NS1A binding protein	AK144835|Ivns1abp|117198|influenza virus NS1A binding protein	AK146001|Ivns1abp|117198|influenza virus NS1A binding protein	AK159254|Ivns1abp|117198|influenza virus NS1A binding protein	BC040250|Ivns1abp|117198|influenza virus NS1A binding protein	AK144619|Ivns1abp|117198|influenza virus NS1A binding protein	AK146494|Ivns1abp|117198|influenza virus NS1A binding protein	AK146645|Ivns1abp|117198|influenza virus NS1A binding protein	DQ914522|Ivns1abp|117198|influenza virus NS1A binding protein	AK007291|Ivns1abp|117198|influenza virus NS1A binding protein	AK145845|Ivns1abp|117198|influenza virus NS1A binding protein	AK129229|Ivns1abp|117198|influenza virus NS1A binding protein	DQ914523|Ivns1abp|117198|influenza virus NS1A binding protein
mm9_v1_chr11_-_70460333_70460538	0.392256	UCCAGUU	AK186207|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK009824|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK168951|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK009487|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	BC019631|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	NM_024211|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	BC003455|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm9_v1_chr3_+_89324085_89324085	0.386279	UCCAGUU	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr19_+_8893890_8893890	0.385814	UCCAGUU	NM_001081196|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr4_-_115726466_115726490	0.372389	UCCAGUU	AK012994|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4	NM_028142|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr11_+_77499638_77499656	0.339585	UCCAGUU	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr7_-_86859071_86859071	0.329905	UCCAGUU	BC141045|Kif7|16576|kinesin family member 7	BC145222|Kif7|16576|kinesin family member 7	NM_010626|Kif7|16576|kinesin family member 7
mm9_v1_chr2_-_119303348_119303443	0.328006	UCCAGUU	BC061495|Ino80|68142|INO80 homolog (S. cerevisiae)	AK040612|Ino80|68142|INO80 homolog (S. cerevisiae)	NM_026574|Ino80|68142|INO80 homolog (S. cerevisiae)
mm9_v1_chr16_+_22857885_22858041	0.313605	UCCAGUU	NM_001190804|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	NM_001190805|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	NM_026400|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK075785|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK148511|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK010861|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK075953|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK050500|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK166730|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AK144516|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC003999|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC040747|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	BC018282|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11	AY054981|Dnajb11|67838|DnaJ (Hsp40) homolog, subfamily B, member 11
mm9_v1_chr15_+_99803210_99803320	0.293517	UCCAGUU	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr8_-_129117310_129117573	0.273899	UCCAGUU	NM_001164598|Irf2bp2|270110|interferon regulatory factor 2 binding protein 2
mm9_v1_chr8_+_107694536_107694875	0.255242	UCCAGUU	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chrX_-_7722800_7722927	0.210718	UCCAGUU	BC006580|Rbm3|19652|RNA binding motif protein 3	BC086491|Rbm3|19652|RNA binding motif protein 3	BC059098|Rbm3|19652|RNA binding motif protein 3	AK167800|Rbm3|19652|RNA binding motif protein 3	AK088031|Rbm3|19652|RNA binding motif protein 3	AK003720|Rbm3|19652|RNA binding motif protein 3	AK007354|Rbm3|19652|RNA binding motif protein 3	AK049575|Rbm3|19652|RNA binding motif protein 3	AK167967|Rbm3|19652|RNA binding motif protein 3	AK168338|Rbm3|19652|RNA binding motif protein 3	AK133795|Rbm3|19652|RNA binding motif protein 3	AK168285|Rbm3|19652|RNA binding motif protein 3	AK154044|Rbm3|19652|RNA binding motif protein 3	BC106176|Rbm3|19652|RNA binding motif protein 3	NM_001166409|Rbm3|19652|RNA binding motif protein 3	NM_001166410|Rbm3|19652|RNA binding motif protein 3	NM_001166411|Rbm3|19652|RNA binding motif protein 3	NM_016809|Rbm3|19652|RNA binding motif protein 3
mm9_v1_chr9_-_119846611_119846675	0.185505	UCCAGUU	AK170627|Gorasp1|74498|golgi reassembly stacking protein 1	AK154986|Gorasp1|74498|golgi reassembly stacking protein 1	BC012251|Gorasp1|74498|golgi reassembly stacking protein 1	NM_028976|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr10_-_52101880_52101956	0.173627	UCCAGUU	BC051171|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	NM_053187|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	AK171881|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr1_-_137481914_137481937	0.128432	UCCAGUU	NM_173437|Nav1|215690|neuron navigator 1
mm9_v1_chr13_-_95055235_95055506	0.112611	UCCAGUU	BC034283|Scamp1|107767|secretory carrier membrane protein 1	NM_029153|Scamp1|107767|secretory carrier membrane protein 1	AK135058|Scamp1|107767|secretory carrier membrane protein 1	AK154671|Scamp1|107767|secretory carrier membrane protein 1	AK170343|Scamp1|107767|secretory carrier membrane protein 1
mm9_v1_chr13_-_85428957_85429102	0.109715	UCCAGUU	NM_145452|Rasa1|218397|RAS p21 protein activator 1	AK046620|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr4_-_19849712_19849751	0.106553	UCCAGUU	AY145896|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	NM_175406|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK075745|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr12_+_79327630_79327650	0.0909227	UCCAGUU	AK144569|Gphn|268566|gephyrin	NM_145965|Gphn|268566|gephyrin	NM_172952|Gphn|268566|gephyrin
mm9_v1_chr2_-_102241053_102241195	0.0853119	UCCAGUU	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr5_-_53604673_53604743	0.0789325	UCCAGUU	AK122362|Sel1l3|231238|sel-1 suppressor of lin-12-like 3 (C. elegans)	NM_172710|Sel1l3|231238|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm9_v1_chr11_+_82594636_82594745	0.078467	UCCAGUU	NM_010716|Lig3|16882|ligase III, DNA, ATP-dependent	BC026143|Lig3|16882|ligase III, DNA, ATP-dependent	AK031540|Lig3|16882|ligase III, DNA, ATP-dependent	AK156018|Lig3|16882|ligase III, DNA, ATP-dependent	AK010719|Lig3|16882|ligase III, DNA, ATP-dependent	AK150644|Lig3|16882|ligase III, DNA, ATP-dependent	AK167363|Lig3|16882|ligase III, DNA, ATP-dependent	BC049240|Lig3|16882|ligase III, DNA, ATP-dependent	BC083500|Lig3|16882|ligase III, DNA, ATP-dependent	AK143531|Lig3|16882|ligase III, DNA, ATP-dependent
mm9_v1_chr11_+_102526898_102526901	0.0721396	UCCAGUU	AK163979|Gm1564|268491|predicted gene 1564	NM_001127576|Gm1564|268491|predicted gene 1564
mm9_v1_chr1_-_16609325_16609423	0.0686625	UCCAGUU	AK077997|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	BC020124|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK082233|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	NM_025773|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK042870|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK044463|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK050679|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK015348|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK046086|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)	AK050923|Ube2w|66799|ubiquitin-conjugating enzyme E2W (putative)
mm9_v1_chr14_-_120441639_120441656	0.0446376	UCCAGUU	AK085382|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1	AK142510|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1	NM_001001490|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1
mm9_v1_chrX_+_35669345_35669443	0.0301525	UCCAGUU	BC137923|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	BC137924|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AK053500|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348324|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348325|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	NM_133690|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr17_+_81343933_81344010	0.027214	UCCAGUU	AK013110|Tmem178|68027|transmembrane protein 178	AK014196|Tmem178|68027|transmembrane protein 178	NM_026516|Tmem178|68027|transmembrane protein 178
mm9_v1_chr16_+_22009551_22009592	0.0227278	UCCAGUU	NM_029457|Senp2|75826|SUMO/sentrin specific peptidase 2	AK031030|Senp2|75826|SUMO/sentrin specific peptidase 2	AK015987|Senp2|75826|SUMO/sentrin specific peptidase 2	BC031652|Senp2|75826|SUMO/sentrin specific peptidase 2	AF368904|Senp2|75826|SUMO/sentrin specific peptidase 2
mm9_v1_chr2_+_79547936_79548278	0.0115499	UCCAGUU	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr12_-_80397239_80397289	0.00995119	UCCAGUU	AK220333|Zfyve26|211978|zinc finger, FYVE domain containing 26	BC141359|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK132344|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK041668|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK135518|Zfyve26|211978|zinc finger, FYVE domain containing 26	NM_001008550|Zfyve26|211978|zinc finger, FYVE domain containing 26
mm9_v1_chrX_+_54306724_54306791	0.00625069	UCCAGUU	AK012522|Htatsf1|72459|HIV TAT specific factor 1	BC037711|Htatsf1|72459|HIV TAT specific factor 1	NM_028242|Htatsf1|72459|HIV TAT specific factor 1
