mm9_v1_chr14_+_121434765_121434823	10.1524	UCCCUUU	AK134958|Farp1|223254|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_134082|Farp1|223254|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm9_v1_chr11_-_88725877_88725929	9.28696	UCCCUUU	AK076216|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_001042541|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr13_+_58909168_58909217	8.07697	UCCCUUU	NM_001025074|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	X17647|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr14_+_12386043_12386066	8.00561	UCCCUUU	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr11_-_88712812_88712825	7.78425	UCCCUUU	U95145|Akap1|11640|A kinase (PRKA) anchor protein 1	U95146|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_009648|Akap1|11640|A kinase (PRKA) anchor protein 1	AK132749|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr2_-_5816381_5816442	7.37343	UCCCUUU	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr5_-_51945054_51945159	7.16142	UCCCUUU	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr15_+_99548019_99548062	6.82899	UCCCUUU	AK004565|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)	BC019391|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)	NM_010271|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)	AK220445|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)	J02655|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)	BC005756|Gpd1|14555|glycerol-3-phosphate dehydrogenase 1 (soluble)
mm9_v1_chr4_-_76240202_76240202	6.31452	UCCCUUU	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr3_-_55987612_55987634	6.29627	UCCCUUU	NM_030595|Nbea|26422|neurobeachin	Y18276|Nbea|26422|neurobeachin
mm9_v1_chr7_+_4071087_4071169	6.20461	UCCCUUU	AK043998|Ttyh1|57776|tweety homolog 1 (Drosophila)	NM_001001454|Ttyh1|57776|tweety homolog 1 (Drosophila)	NM_001109765|Ttyh1|57776|tweety homolog 1 (Drosophila)	NM_021324|Ttyh1|57776|tweety homolog 1 (Drosophila)	AK031550|Ttyh1|57776|tweety homolog 1 (Drosophila)
mm9_v1_chr2_+_158201373_158201515	6.18405	UCCCUUU	NM_175692|Snhg11|319317|small nucleolar RNA host gene 11	AK157790|Snhg11|319317|small nucleolar RNA host gene 11	AK080745|Snhg11|319317|small nucleolar RNA host gene 11	AK133939|Snhg11|319317|small nucleolar RNA host gene 11	AK138473|Snhg11|319317|small nucleolar RNA host gene 11	BC049241|Snhg11|319317|small nucleolar RNA host gene 11	BC030414|Snhg11|319317|small nucleolar RNA host gene 11
mm9_v1_chr18_-_64820573_64820653	6.05928	UCCCUUU	AK036959|Atp8b1|54670|ATPase, class I, type 8B, member 1	NM_001001488|Atp8b1|54670|ATPase, class I, type 8B, member 1
mm9_v1_chr4_-_75779379_75779379	6.00834	UCCCUUU	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr9_-_21856445_21856470	5.77261	UCCCUUU	U29148|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC052097|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	AK090281|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	NM_010487|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr11_-_121249511_121249580	5.75135	UCCCUUU	BC096601|Rab40b|217371|Rab40b, member RAS oncogene family	NM_139147|Rab40b|217371|Rab40b, member RAS oncogene family
mm9_v1_chr7_+_148748077_148748100	5.71829	UCCCUUU	NM_007459|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr8_-_48437701_48437701	5.52771	UCCCUUU	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chrX_+_140127827_140127856	5.50989	UCCCUUU	AF082297|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195046|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195047|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496262|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496263|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943854|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr9_-_57400530_57400594	5.50228	UCCCUUU	BC009068|Mpi|110119|mannose phosphate isomerase	BC051163|Mpi|110119|mannose phosphate isomerase	AF244360|Mpi|110119|mannose phosphate isomerase	AK217169|Mpi|110119|mannose phosphate isomerase	AK003896|Mpi|110119|mannose phosphate isomerase	AK132777|Mpi|110119|mannose phosphate isomerase	NM_025837|Mpi|110119|mannose phosphate isomerase
mm9_v1_chr8_+_56040080_56040120	5.17803	UCCCUUU	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr6_-_39327637_39327722	5.16982	UCCCUUU	BC099673|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK076213|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK077836|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK167716|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	BC005744|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK145242|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	NM_028123|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm9_v1_chr2_+_156246644_156246847	5.14164	UCCCUUU	AK147611|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK147272|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK165479|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	NM_001003815|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	NM_013510|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK044744|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK154704|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AF061283|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	BC034751|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chrX_+_10062237_10062294	5.13559	UCCCUUU	NM_019634|Tspan7|21912|tetraspanin 7	AK195558|Tspan7|21912|tetraspanin 7	AK147306|Tspan7|21912|tetraspanin 7	AK147404|Tspan7|21912|tetraspanin 7	AK004776|Tspan7|21912|tetraspanin 7	BC058603|Tspan7|21912|tetraspanin 7	AF052492|Tspan7|21912|tetraspanin 7	BC050153|Tspan7|21912|tetraspanin 7	D26483|Tspan7|21912|tetraspanin 7
mm9_v1_chr8_-_124175827_124175832	5.0355	UCCCUUU	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr8_-_70342105_70342226	4.99864	UCCCUUU	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr8_-_48374755_48374779	4.97803	UCCCUUU	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chrX_+_99044723_99044723	4.8618	UCCCUUU	AK142977|Nhsl2|100042480|NHS-like 2	NM_001163610|Nhsl2|100042480|NHS-like 2
mm9_v1_chrX_+_139997806_139997811	4.68965	UCCCUUU	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr11_+_105451296_105451348	4.63311	UCCCUUU	AK019982|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	NM_181071|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	AK051973|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm9_v1_chr3_+_129235284_129235325	4.60157	UCCCUUU	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr11_+_104092749_104092776	4.52459	UCCCUUU	M18775|Mapt|17762|microtubule-associated protein tau	M18776|Mapt|17762|microtubule-associated protein tau	NM_001038609|Mapt|17762|microtubule-associated protein tau	NM_010838|Mapt|17762|microtubule-associated protein tau	AK078167|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr18_-_74224541_74224647	4.5081	UCCCUUU	AK157930|Mapk4|225724|mitogen-activated protein kinase 4	AK046051|Mapk4|225724|mitogen-activated protein kinase 4	AK079654|Mapk4|225724|mitogen-activated protein kinase 4	NM_172632|Mapk4|225724|mitogen-activated protein kinase 4
mm9_v1_chr12_-_74647339_74647462	4.43375	UCCCUUU	BC119224|Tmem30b|238257|transmembrane protein 30B	BC119226|Tmem30b|238257|transmembrane protein 30B	AK030302|Tmem30b|238257|transmembrane protein 30B	AK037246|Tmem30b|238257|transmembrane protein 30B	AK033580|Tmem30b|238257|transmembrane protein 30B	NM_178715|Tmem30b|238257|transmembrane protein 30B	AK169014|Tmem30b|238257|transmembrane protein 30B
mm9_v1_chr16_-_18629938_18630073	4.39658	UCCCUUU	AK134700|Sept5|18951|septin 5	BC094347|Sept5|18951|septin 5	NM_213614|Sept5|18951|septin 5	BC141073|Sept5|18951|septin 5	BC145331|Sept5|18951|septin 5	BC145332|Sept5|18951|septin 5
mm9_v1_chr6_-_113293879_113293979	4.39471	UCCCUUU	AK089742|Camk1|52163|calcium/calmodulin-dependent protein kinase I	AK170188|Camk1|52163|calcium/calmodulin-dependent protein kinase I	BC014825|Camk1|52163|calcium/calmodulin-dependent protein kinase I	NM_133926|Camk1|52163|calcium/calmodulin-dependent protein kinase I	AK134936|Camk1|52163|calcium/calmodulin-dependent protein kinase I
mm9_v1_chr10_-_83903215_83903291	4.30465	UCCCUUU	BC082328|Nuak1|77976|NUAK family, SNF1-like kinase, 1	NM_001004363|Nuak1|77976|NUAK family, SNF1-like kinase, 1
mm9_v1_chr18_-_16967557_16967557	4.26199	UCCCUUU	NM_007664|Cdh2|12558|cadherin 2
mm9_v1_chrX_+_78315963_78315999	4.21771	UCCCUUU	NM_138751|Tmem47|192216|transmembrane protein 47
mm9_v1_chr5_+_96802973_96802973	4.20465	UCCCUUU	AJ489280|Fras1|231470|Fraser syndrome 1 homolog (human)	NM_175473|Fras1|231470|Fraser syndrome 1 homolog (human)
mm9_v1_chrX_+_140100287_140100287	4.1982	UCCCUUU	NM_001195049|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	U39738|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr8_-_70434808_70434844	4.16809	UCCCUUU	BC052365|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK161498|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_030263|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr15_+_68758773_68758908	4.14198	UCCCUUU	AF079763|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AF099092|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	NM_010158|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AK014353|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	BC057577|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3
mm9_v1_chr10_-_8605668_8605870	4.1243	UCCCUUU	AJ507736|Sash1|70097|SAM and SH3 domain containing 1	AK149872|Sash1|70097|SAM and SH3 domain containing 1	AK049453|Sash1|70097|SAM and SH3 domain containing 1	NM_175155|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr3_+_7366586_7366727	4.02519	UCCCUUU	NM_008862|Pkia|18767|protein kinase inhibitor, alpha	BC048244|Pkia|18767|protein kinase inhibitor, alpha	AK139347|Pkia|18767|protein kinase inhibitor, alpha
mm9_v1_chr13_+_41345120_41345273	3.99131	UCCCUUU	NM_001135577|BC024659|108934|cDNA sequence BC024659	BC066054|BC024659|108934|cDNA sequence BC024659	BC094222|BC024659|108934|cDNA sequence BC024659
mm9_v1_chr3_-_146444377_146444386	3.98052	UCCCUUU	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr13_+_40955500_40955723	3.9662	UCCCUUU	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr13_-_76081244_76081314	3.95888	UCCCUUU	BC005664|Rhobtb3|73296|Rho-related BTB domain containing 3	BC050836|Rhobtb3|73296|Rho-related BTB domain containing 3	NM_028493|Rhobtb3|73296|Rho-related BTB domain containing 3	AK129234|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr6_-_58857000_58857134	3.92101	UCCCUUU	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr2_-_156817751_156817861	3.78092	UCCCUUU	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr12_+_82127791_82127817	3.64628	UCCCUUU	AK040931|Smoc1|64075|SPARC related modular calcium binding 1	NM_001146217|Smoc1|64075|SPARC related modular calcium binding 1	NM_022316|Smoc1|64075|SPARC related modular calcium binding 1	BC031804|Smoc1|64075|SPARC related modular calcium binding 1	AF070470|Smoc1|64075|SPARC related modular calcium binding 1
mm9_v1_chr2_+_109757803_109757808	3.61943	UCCCUUU	NM_172671|Lgr4|107515|leucine-rich repeat-containing G protein-coupled receptor 4
mm9_v1_chr7_+_31076771_31076772	3.59144	UCCCUUU	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr4_+_101091913_101091947	3.58308	UCCCUUU	NM_001177605|Ak4|11639|adenylate kinase 4	AK154374|Ak4|11639|adenylate kinase 4	NM_001177604|Ak4|11639|adenylate kinase 4
mm9_v1_chr5_-_137521896_137522032	3.5517	UCCCUUU	AK002225|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	M62418|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	NM_007457|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	BC052692|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr2_+_156301543_156301577	3.53193	UCCCUUU	NM_001006664|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr4_+_57858096_57858154	3.51079	UCCCUUU	NM_001035532|Akap2|11641|A kinase (PRKA) anchor protein 2	NM_009649|Akap2|11641|A kinase (PRKA) anchor protein 2	AK041873|Akap2|11641|A kinase (PRKA) anchor protein 2	AK147420|Akap2|11641|A kinase (PRKA) anchor protein 2	BC003735|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr6_+_41555460_41555790	3.49005	UCCCUUU	NM_001146351|Ephb6|13848|Eph receptor B6	NM_007680|Ephb6|13848|Eph receptor B6	AK087423|Ephb6|13848|Eph receptor B6	AK076442|Ephb6|13848|Eph receptor B6	L77867|Ephb6|13848|Eph receptor B6
mm9_v1_chr2_-_127482430_127482430	3.40881	UCCCUUU	AK158653|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	NM_001171187|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	NM_010762|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein
mm9_v1_chr19_-_40476799_40476801	3.40633	UCCCUUU	NM_001034964|Sorbs1|20411|sorbin and SH3 domain containing 1	AK146712|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr14_-_26588341_26588548	3.38541	UCCCUUU	NM_001101433|Zcchc24|71918|zinc finger, CCHC domain containing 24	BC147263|Zcchc24|71918|zinc finger, CCHC domain containing 24	BC147264|Zcchc24|71918|zinc finger, CCHC domain containing 24
mm9_v1_chrX_+_139952975_139953253	3.36384	UCCCUUU	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr3_-_146433544_146433656	3.34356	UCCCUUU	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr2_-_32208737_32208880	3.3264	UCCCUUU	L31395|Dnm1|13429|dynamin 1	BC058623|Dnm1|13429|dynamin 1	L31397|Dnm1|13429|dynamin 1	AK220483|Dnm1|13429|dynamin 1	AK144142|Dnm1|13429|dynamin 1	BC034679|Dnm1|13429|dynamin 1	AK011651|Dnm1|13429|dynamin 1	NM_010065|Dnm1|13429|dynamin 1
mm9_v1_chr1_-_77511653_77511664	3.31503	UCCCUUU	AK028509|Epha4|13838|Eph receptor A4	AK147698|Epha4|13838|Eph receptor A4	AK132203|Epha4|13838|Eph receptor A4	NM_007936|Epha4|13838|Eph receptor A4	S57168|Epha4|13838|Eph receptor A4	X65138|Epha4|13838|Eph receptor A4
mm9_v1_chr18_+_64414012_64414029	3.30005	UCCCUUU	AK161482|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_009182|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK015874|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr7_-_106331080_106331233	3.28256	UCCCUUU	AF384160|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK016660|Dgat2|67800|diacylglycerol O-acyltransferase 2	BC043447|Dgat2|67800|diacylglycerol O-acyltransferase 2	NM_026384|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK002443|Dgat2|67800|diacylglycerol O-acyltransferase 2
mm9_v1_chr11_+_17059297_17059300	3.27573	UCCCUUU	NM_024459|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr15_-_8660729_8660806	3.24602	UCCCUUU	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr4_+_57867433_57867513	3.23308	UCCCUUU	NM_001035533|Akap2|11641|A kinase (PRKA) anchor protein 2	AK182017|Akap2|11641|A kinase (PRKA) anchor protein 2	AK209944|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr19_-_40525876_40525887	3.21188	UCCCUUU	AF078666|Sorbs1|20411|sorbin and SH3 domain containing 1	AF078667|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_001034962|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_001034963|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr7_+_64845887_64845914	3.20564	UCCCUUU	AK083107|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_001038701|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr4_+_13711928_13711928	3.18368	UCCCUUU	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr9_+_80012837_80012863	3.10333	UCCCUUU	NM_001039546|Myo6|17920|myosin VI	AK053882|Myo6|17920|myosin VI
mm9_v1_chr2_+_102498839_102498845	3.07072	UCCCUUU	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr4_+_101092307_101092393	3.05117	UCCCUUU	NM_009647|Ak4|11639|adenylate kinase 4	AK144439|Ak4|11639|adenylate kinase 4	BC086791|Ak4|11639|adenylate kinase 4	D85036|Ak4|11639|adenylate kinase 4	AB020239|Ak4|11639|adenylate kinase 4	BC086663|Ak4|11639|adenylate kinase 4	AK166975|Ak4|11639|adenylate kinase 4
mm9_v1_chr11_-_64976408_64976473	3.0399	UCCCUUU	BC056366|Arhgap44|216831|Rho GTPase activating protein 44	BC059911|Arhgap44|216831|Rho GTPase activating protein 44	NM_001099288|Arhgap44|216831|Rho GTPase activating protein 44	NM_175003|Arhgap44|216831|Rho GTPase activating protein 44
mm9_v1_chr7_+_119571219_119571592	3.03889	UCCCUUU	BC059236|Parva|57342|parvin, alpha	NM_020606|Parva|57342|parvin, alpha	AB045321|Parva|57342|parvin, alpha	AF237774|Parva|57342|parvin, alpha	AK162796|Parva|57342|parvin, alpha	AK076473|Parva|57342|parvin, alpha	AF264766|Parva|57342|parvin, alpha	BC039750|Parva|57342|parvin, alpha
mm9_v1_chr19_-_40588219_40588234	3.03819	UCCCUUU	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr2_+_119373442_119373461	2.99465	UCCCUUU	NM_019769|1500003O03Rik|56398|RIKEN cDNA 1500003O03 gene	AK156588|1500003O03Rik|56398|RIKEN cDNA 1500003O03 gene	AK045920|1500003O03Rik|56398|RIKEN cDNA 1500003O03 gene	AK168284|1500003O03Rik|56398|RIKEN cDNA 1500003O03 gene	AK075723|1500003O03Rik|56398|RIKEN cDNA 1500003O03 gene
mm9_v1_chr3_+_124023954_124024027	2.97245	UCCCUUU	NM_146140|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK052946|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK048118|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK083053|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK044115|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC024829|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC027120|Tram1l1|229801|translocation associated membrane protein 1-like 1
mm9_v1_chr8_-_92872139_92872206	2.97039	UCCCUUU	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr1_+_155500166_155500298	2.95752	UCCCUUU	NM_026380|Rgs8|67792|regulator of G-protein signaling 8	BC065056|Rgs8|67792|regulator of G-protein signaling 8	AK044337|Rgs8|67792|regulator of G-protein signaling 8	AK142301|Rgs8|67792|regulator of G-protein signaling 8
mm9_v1_chr3_+_55046447_55046542	2.95455	UCCCUUU	AK147831|Dclk1|13175|doublecortin-like kinase 1	NM_001111053|Dclk1|13175|doublecortin-like kinase 1	NM_001195538|Dclk1|13175|doublecortin-like kinase 1	NM_019978|Dclk1|13175|doublecortin-like kinase 1	AB093234|Dclk1|13175|doublecortin-like kinase 1	AK164993|Dclk1|13175|doublecortin-like kinase 1	AF155820|Dclk1|13175|doublecortin-like kinase 1	BC064783|Dclk1|13175|doublecortin-like kinase 1	BC021354|Dclk1|13175|doublecortin-like kinase 1	AK043874|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr2_-_37502738_37502804	2.94547	UCCCUUU	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr13_+_46597271_46597443	2.89653	UCCCUUU	AK035556|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	NM_026056|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr15_-_98438063_98438063	2.87669	UCCCUUU	AK147516|Adcy6|11512|adenylate cyclase 6	NM_007405|Adcy6|11512|adenylate cyclase 6
mm9_v1_chr7_+_25266986_25267120	2.78879	UCCCUUU	AK143204|Cadm4|260299|cell adhesion molecule 4	NM_153112|Cadm4|260299|cell adhesion molecule 4	AY059394|Cadm4|260299|cell adhesion molecule 4
mm9_v1_chr2_+_155207581_155207616	2.75912	UCCCUUU	AJ297793|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK146589|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	BC043086|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	NM_178111|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK149495|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_-_69373707_69373738	2.75882	UCCCUUU	NM_007911|Efnb3|13643|ephrin B3
mm9_v1_chr19_-_40588297_40588344	2.75277	UCCCUUU	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr18_+_23962468_23962588	2.74822	UCCCUUU	NM_153058|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK038562|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK140595|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK040767|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045904|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148954|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046221|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC027056|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC035254|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC025804|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK050527|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148480|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046095|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK088734|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC028987|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045493|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr2_+_30219837_30219854	2.74606	UCCCUUU	BC051404|Fam73b|108958|family with sequence similarity 73, member B	NM_175392|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr6_+_88674398_88674540	2.71934	UCCCUUU	NM_001166249|Mgll|23945|monoglyceride lipase	NM_011844|Mgll|23945|monoglyceride lipase	AK131645|Mgll|23945|monoglyceride lipase	AK028008|Mgll|23945|monoglyceride lipase	AK148242|Mgll|23945|monoglyceride lipase	AK148395|Mgll|23945|monoglyceride lipase	AJ001118|Mgll|23945|monoglyceride lipase	BC057965|Mgll|23945|monoglyceride lipase	AK215869|Mgll|23945|monoglyceride lipase	AK185666|Mgll|23945|monoglyceride lipase	AK188627|Mgll|23945|monoglyceride lipase	AK206822|Mgll|23945|monoglyceride lipase	AK208240|Mgll|23945|monoglyceride lipase	AK211363|Mgll|23945|monoglyceride lipase
mm9_v1_chr15_-_76983985_76984241	2.69784	UCCCUUU	AF387322|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659951|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659952|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659953|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017388|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017389|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	BC002124|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AF229055|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AK044929|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110828|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110829|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110830|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr3_+_55265654_55265683	2.62675	UCCCUUU	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chrX_-_22942176_22942193	2.56509	UCCCUUU	AK004677|Klhl13|67455|kelch-like 13 (Drosophila)	NM_026167|Klhl13|67455|kelch-like 13 (Drosophila)	AK045102|Klhl13|67455|kelch-like 13 (Drosophila)	AK051752|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr3_+_54165028_54165059	2.55775	UCCCUUU	NM_001198765|Postn|50706|periostin, osteoblast specific factor	NM_001198766|Postn|50706|periostin, osteoblast specific factor	NM_015784|Postn|50706|periostin, osteoblast specific factor	AK030756|Postn|50706|periostin, osteoblast specific factor	AK154049|Postn|50706|periostin, osteoblast specific factor	D13664|Postn|50706|periostin, osteoblast specific factor	BC007141|Postn|50706|periostin, osteoblast specific factor	AY651928|Postn|50706|periostin, osteoblast specific factor	BC031449|Postn|50706|periostin, osteoblast specific factor
mm9_v1_chr13_+_40982534_40982735	2.5561	UCCCUUU	NM_008105|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK080061|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK054226|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AB037597|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435149|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr4_+_13670425_13670448	2.54103	UCCCUUU	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr4_+_151712739_151712761	2.53571	UCCCUUU	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chr1_+_196446006_196446022	2.53502	UCCCUUU	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr13_+_31898501_31898514	2.51094	UCCCUUU	BC027689|Foxc1|17300|forkhead box C1	NM_008592|Foxc1|17300|forkhead box C1
mm9_v1_chr3_-_117063793_117063793	2.50156	UCCCUUU	AF541279|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK046782|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266266|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266267|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	NM_177664|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr12_+_90191833_90191842	2.49625	UCCCUUU	NM_172544|Nrxn3|18191|neurexin III	AK032126|Nrxn3|18191|neurexin III
mm9_v1_chr7_-_134164627_134164726	2.48498	UCCCUUU	NM_001102563|Prrt2|69017|proline-rich transmembrane protein 2
mm9_v1_chr6_-_126595818_126595818	2.45309	UCCCUUU	NM_010595|Kcna1|16485|potassium voltage-gated channel, shaker-related subfamily, member 1
mm9_v1_chr14_-_94287950_94288026	2.44051	UCCCUUU	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chr15_+_82105322_82105458	2.43952	UCCCUUU	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chr4_+_101091875_101091893	2.41526	UCCCUUU	AK134600|Ak4|11639|adenylate kinase 4	NM_001177602|Ak4|11639|adenylate kinase 4
mm9_v1_chr19_+_28909559_28909655	2.41236	UCCCUUU	AK018188|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK045632|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK051428|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK083097|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC065099|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC064797|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	D43797|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	NM_009199|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U73521|Slc1a1|20510|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm9_v1_chr12_-_77923303_77923517	2.40738	UCCCUUU	AB232610|Rab15|104886|RAB15, member RAS oncogene family	AK158637|Rab15|104886|RAB15, member RAS oncogene family	BC013790|Rab15|104886|RAB15, member RAS oncogene family	AK158768|Rab15|104886|RAB15, member RAS oncogene family	BC027769|Rab15|104886|RAB15, member RAS oncogene family	NM_134050|Rab15|104886|RAB15, member RAS oncogene family
mm9_v1_chr3_-_146433200_146433208	2.40315	UCCCUUU	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chrX_-_159081510_159081550	2.38616	UCCCUUU	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr18_+_65183180_65183324	2.37568	UCCCUUU	NM_031881|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr3_+_75878452_75878519	2.35918	UCCCUUU	AK140611|Fstl5|213262|follistatin-like 5	AK033652|Fstl5|213262|follistatin-like 5	AK081152|Fstl5|213262|follistatin-like 5	AF374460|Fstl5|213262|follistatin-like 5	BC075640|Fstl5|213262|follistatin-like 5	NM_178673|Fstl5|213262|follistatin-like 5
mm9_v1_chr17_+_8476638_8476687	2.35828	UCCCUUU	AK170514|Brp44l|55951|brain protein 44-like	BC103767|Brp44l|55951|brain protein 44-like	AK002241|Brp44l|55951|brain protein 44-like	AK013391|Brp44l|55951|brain protein 44-like	NM_018819|Brp44l|55951|brain protein 44-like	AK005348|Brp44l|55951|brain protein 44-like
mm9_v1_chr4_+_148919218_148919225	2.33085	UCCCUUU	AK003595|Ctnnbip1|67087|catenin beta interacting protein 1	NM_001141930|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr16_-_28753276_28753293	2.31568	UCCCUUU	BC030485|Fgf12|14167|fibroblast growth factor 12	AF020739|Fgf12|14167|fibroblast growth factor 12	NM_010199|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr2_+_102546576_102546605	2.31211	UCCCUUU	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr1_-_72921438_72921462	2.30397	UCCCUUU	BC057447|Igfbp5|16011|insulin-like growth factor binding protein 5	NM_010518|Igfbp5|16011|insulin-like growth factor binding protein 5	AK142108|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr5_+_37259780_37259853	2.28247	UCCCUUU	AY348866|Ppp2r2c|269643|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform	BC059811|Ppp2r2c|269643|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform	NM_172994|Ppp2r2c|269643|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform
mm9_v1_chr5_-_73729789_73729885	2.25105	UCCCUUU	BC044883|Ociad2|433904|OCIA domain containing 2	AK007617|Ociad2|433904|OCIA domain containing 2	NM_026950|Ociad2|433904|OCIA domain containing 2
mm9_v1_chr12_+_25265583_25265583	2.23926	UCCCUUU	AF411211|Grhl1|195733|grainyhead-like 1 (Drosophila)	NM_145890|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr5_+_89316245_89316323	2.23177	UCCCUUU	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr12_-_14158843_14158897	2.21864	UCCCUUU	BC005488|Fam84a|105005|family with sequence similarity 84, member A	NM_029007|Fam84a|105005|family with sequence similarity 84, member A	AK014625|Fam84a|105005|family with sequence similarity 84, member A
mm9_v1_chr2_+_65683823_65683911	2.21724	UCCCUUU	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr14_-_21437545_21437583	2.17152	UCCCUUU	AK047620|Usp54|78787|ubiquitin specific peptidase 54	NM_030180|Usp54|78787|ubiquitin specific peptidase 54
mm9_v1_chr3_+_5218545_5218658	2.17076	UCCCUUU	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr10_+_106708886_106708980	2.1512	UCCCUUU	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr2_+_67955769_67955862	2.15092	UCCCUUU	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chr2_-_91284778_91284823	2.14371	UCCCUUU	BC089006|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK164320|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC085239|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK045977|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	NM_175123|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC032255|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr14_+_119187092_119187139	2.13244	UCCCUUU	NM_001160096|Cldn10|58187|claudin 10	NM_001160097|Cldn10|58187|claudin 10	NM_001160098|Cldn10|58187|claudin 10	NM_023878|Cldn10|58187|claudin 10	AK020131|Cldn10|58187|claudin 10	BC021770|Cldn10|58187|claudin 10
mm9_v1_chr17_-_12962478_12962617	2.12674	UCCCUUU	BC150817|Igf2r|16004|insulin-like growth factor 2 receptor	BC171973|Igf2r|16004|insulin-like growth factor 2 receptor	U04710|Igf2r|16004|insulin-like growth factor 2 receptor	NM_010515|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr10_+_90038471_90038471	2.10741	UCCCUUU	BC098373|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177397|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr3_+_121656136_121656252	2.10155	UCCCUUU	BC040387|Arhgap29|214137|Rho GTPase activating protein 29	NM_172525|Arhgap29|214137|Rho GTPase activating protein 29
mm9_v1_chr15_+_89330287_89330287	2.10042	UCCCUUU	AB231013|Shank3|58234|SH3/ankyrin domain gene 3	NM_021423|Shank3|58234|SH3/ankyrin domain gene 3
mm9_v1_chr11_-_87811778_87811799	2.07788	UCCCUUU	BC049621|Dynll2|68097|dynein light chain LC8-type 2	AK006876|Dynll2|68097|dynein light chain LC8-type 2	NM_001168471|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr18_+_37098858_37098971	2.06167	UCCCUUU	BC030897|Pcdha2|353234|protocadherin alpha 2	NM_198117|Pcdha2|353234|protocadherin alpha 2	BC141390|Pcdha2|353234|protocadherin alpha 2	AY013760|Pcdha2|353234|protocadherin alpha 2
mm9_v1_chr4_+_148892231_148892432	2.06026	UCCCUUU	AK036181|Ctnnbip1|67087|catenin beta interacting protein 1	NM_023465|Ctnnbip1|67087|catenin beta interacting protein 1	AK048258|Ctnnbip1|67087|catenin beta interacting protein 1	BC038253|Ctnnbip1|67087|catenin beta interacting protein 1	BC018436|Ctnnbip1|67087|catenin beta interacting protein 1	AB021261|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr1_+_154802198_154802230	2.05941	UCCCUUU	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr13_-_111070392_111070417	2.05885	UCCCUUU	AK014050|Rab3c|67295|RAB3C, member RAS oncogene family	NM_023852|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr3_+_62142698_62142868	2.03079	UCCCUUU	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr14_-_25065141_25065143	2.02708	UCCCUUU	AK147699|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_001163513|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_027726|Dlg5|71228|discs, large homolog 5 (Drosophila)
mm9_v1_chr19_+_27291507_27291624	2.02486	UCCCUUU	AK044683|Vldlr|22359|very low density lipoprotein receptor	AK076172|Vldlr|22359|very low density lipoprotein receptor	NM_001161420|Vldlr|22359|very low density lipoprotein receptor	NM_013703|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr18_-_31606908_31607087	2.00735	UCCCUUU	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chr11_-_87800799_87801034	2.00609	UCCCUUU	AK028319|Dynll2|68097|dynein light chain LC8-type 2	BC011289|Dynll2|68097|dynein light chain LC8-type 2	BC058797|Dynll2|68097|dynein light chain LC8-type 2	BC040822|Dynll2|68097|dynein light chain LC8-type 2	AK011284|Dynll2|68097|dynein light chain LC8-type 2	AK160114|Dynll2|68097|dynein light chain LC8-type 2	AK049645|Dynll2|68097|dynein light chain LC8-type 2	AK078434|Dynll2|68097|dynein light chain LC8-type 2	AK169212|Dynll2|68097|dynein light chain LC8-type 2	NM_026556|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr10_+_52410306_52410508	2.00283	UCCCUUU	NM_178675|Slc35f1|215085|solute carrier family 35, member F1	AK038601|Slc35f1|215085|solute carrier family 35, member F1	AK053426|Slc35f1|215085|solute carrier family 35, member F1	AK139331|Slc35f1|215085|solute carrier family 35, member F1	AK048957|Slc35f1|215085|solute carrier family 35, member F1	AK165021|Slc35f1|215085|solute carrier family 35, member F1	AK053545|Slc35f1|215085|solute carrier family 35, member F1	AK083768|Slc35f1|215085|solute carrier family 35, member F1	AK166268|Slc35f1|215085|solute carrier family 35, member F1	BC059075|Slc35f1|215085|solute carrier family 35, member F1	AK163806|Slc35f1|215085|solute carrier family 35, member F1
mm9_v1_chr1_-_159342713_159342735	1.98745	UCCCUUU	AK039584|Rasal2|226525|RAS protein activator like 2	NM_177644|Rasal2|226525|RAS protein activator like 2
mm9_v1_chr10_+_122701051_122701245	1.98415	UCCCUUU	AK139403|Fam19a2|268354|family with sequence similarity 19, member A2	NM_182807|Fam19a2|268354|family with sequence similarity 19, member A2	AK140763|Fam19a2|268354|family with sequence similarity 19, member A2	BC027082|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr3_+_89222458_89222496	1.9783	UCCCUUU	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr7_+_64846528_64846556	1.97604	UCCCUUU	AK083051|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_008071|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr1_-_125942073_125942135	1.97346	UCCCUUU	BC067026|Dpp10|269109|dipeptidylpeptidase 10	AK046842|Dpp10|269109|dipeptidylpeptidase 10	NM_199021|Dpp10|269109|dipeptidylpeptidase 10
mm9_v1_chr15_-_33617572_33617639	1.9639	UCCCUUU	AK087510|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	AK173253|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	BC079547|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	NM_001085421|Tspyl5|239364|testis-specific protein, Y-encoded-like 5
mm9_v1_chr18_+_65047408_65047414	1.9572	UCCCUUU	NM_001114386|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chrX_+_147778717_147778787	1.92002	UCCCUUU	AK030477|Fam120c|207375|family with sequence similarity 120, member C	AK086058|Fam120c|207375|family with sequence similarity 120, member C	AK156920|Fam120c|207375|family with sequence similarity 120, member C	AY150023|Fam120c|207375|family with sequence similarity 120, member C	AY150024|Fam120c|207375|family with sequence similarity 120, member C	BC137973|Fam120c|207375|family with sequence similarity 120, member C	BC171940|Fam120c|207375|family with sequence similarity 120, member C	NM_198105|Fam120c|207375|family with sequence similarity 120, member C	AK136727|Fam120c|207375|family with sequence similarity 120, member C	AK166381|Fam120c|207375|family with sequence similarity 120, member C
mm9_v1_chr2_+_179177132_179177182	1.91208	UCCCUUU	BC047991|Cdh4|12561|cadherin 4	NM_009867|Cdh4|12561|cadherin 4
mm9_v1_chr9_-_44575861_44575929	1.90801	UCCCUUU	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr4_+_15808409_15808487	1.90046	UCCCUUU	AK002635|Calb1|12307|calbindin 1	AK005081|Calb1|12307|calbindin 1	AK005243|Calb1|12307|calbindin 1	AK028050|Calb1|12307|calbindin 1	AK038856|Calb1|12307|calbindin 1	AK048517|Calb1|12307|calbindin 1	AK077499|Calb1|12307|calbindin 1	NM_009788|Calb1|12307|calbindin 1	AK028327|Calb1|12307|calbindin 1	AK078358|Calb1|12307|calbindin 1	M21531|Calb1|12307|calbindin 1	BC016421|Calb1|12307|calbindin 1
mm9_v1_chr10_+_89336253_89336253	1.86728	UCCCUUU	NM_001128086|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr3_+_90280032_90280140	1.85933	UCCCUUU	AK135449|Ilf2|67781|interleukin enhancer binding factor 2	AK161127|Ilf2|67781|interleukin enhancer binding factor 2	AK031892|Ilf2|67781|interleukin enhancer binding factor 2	AK157129|Ilf2|67781|interleukin enhancer binding factor 2	AK013858|Ilf2|67781|interleukin enhancer binding factor 2	AK044885|Ilf2|67781|interleukin enhancer binding factor 2	AK161126|Ilf2|67781|interleukin enhancer binding factor 2	BC024718|Ilf2|67781|interleukin enhancer binding factor 2	NM_026374|Ilf2|67781|interleukin enhancer binding factor 2	AK012364|Ilf2|67781|interleukin enhancer binding factor 2	AK078003|Ilf2|67781|interleukin enhancer binding factor 2	AK135539|Ilf2|67781|interleukin enhancer binding factor 2
mm9_v1_chr3_+_34548916_34548976	1.85118	UCCCUUU	NM_011443|Sox2|20674|SRY-box containing gene 2	U31967|Sox2|20674|SRY-box containing gene 2
mm9_v1_chrX_-_53851046_53851096	1.84739	UCCCUUU	EU069461|Mmgt1|236792|membrane magnesium transporter 1	AK049689|Mmgt1|236792|membrane magnesium transporter 1	AK036253|Mmgt1|236792|membrane magnesium transporter 1	NM_146234|Mmgt1|236792|membrane magnesium transporter 1
mm9_v1_chrX_-_61530170_61530177	1.83155	UCCCUUU	AK053065|Slitrk4|245446|SLIT and NTRK-like family, member 4	NM_178740|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chr11_-_100007218_100007243	1.83046	UCCCUUU	BC034561|Krt19|16669|keratin 19	M28698|Krt19|16669|keratin 19	AB472075|Krt19|16669|keratin 19	BC085304|Krt19|16669|keratin 19	NM_008471|Krt19|16669|keratin 19
mm9_v1_chr16_+_95923988_95924060	1.81771	UCCCUUU	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr15_-_77137425_77137482	1.81754	UCCCUUU	AK139555|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110827|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_053104|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_175387|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr18_+_37179802_37179999	1.81263	UCCCUUU	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr14_+_119254123_119254192	1.81256	UCCCUUU	NM_001160099|Cldn10|58187|claudin 10	NM_021386|Cldn10|58187|claudin 10	BC029019|Cldn10|58187|claudin 10
mm9_v1_chr6_-_141804691_141804757	1.80462	UCCCUUU	AB031814|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4	NM_030687|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4
mm9_v1_chr18_+_37127284_37127409	1.79891	UCCCUUU	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr6_-_145024596_145024703	1.79813	UCCCUUU	BC053706|Bcat1|12035|branched chain aminotransferase 1, cytosolic	X17502|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK167232|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK166971|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_007532|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK168249|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr18_+_37089837_37089938	1.79694	UCCCUUU	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr11_+_89891661_89891661	1.75908	UCCCUUU	AK007878|Tmem100|67888|transmembrane protein 100	NM_026433|Tmem100|67888|transmembrane protein 100
mm9_v1_chr16_+_45094163_45094171	1.75379	UCCCUUU	AK132178|Ccdc80|67896|coiled-coil domain containing 80	NM_026439|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr19_+_53404935_53404935	1.75341	UCCCUUU	L38821|Mxi1|17859|Max interacting protein 1	NM_001008543|Mxi1|17859|Max interacting protein 1
mm9_v1_chr4_-_58566053_58566195	1.73491	UCCCUUU	BC025425|Lpar1|14745|lysophosphatidic acid receptor 1	AK030330|Lpar1|14745|lysophosphatidic acid receptor 1	NM_172989|Lpar1|14745|lysophosphatidic acid receptor 1
mm9_v1_chr7_+_80885175_80885216	1.73434	UCCCUUU	NM_001162532|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr13_+_93195850_93196061	1.73345	UCCCUUU	AK078203|Ankrd34b|218440|ankyrin repeat domain 34B	AK090387|Ankrd34b|218440|ankyrin repeat domain 34B	NM_175455|Ankrd34b|218440|ankyrin repeat domain 34B	BC096609|Ankrd34b|218440|ankyrin repeat domain 34B	BC119312|Ankrd34b|218440|ankyrin repeat domain 34B	BC119314|Ankrd34b|218440|ankyrin repeat domain 34B
mm9_v1_chr6_-_119058206_119058206	1.72891	UCCCUUU	BC138031|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145103|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145104|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145105|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159533|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159534|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159535|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr6_-_57641998_57642109	1.72232	UCCCUUU	AK011515|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK029193|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK032381|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK003713|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK008978|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	NM_025574|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y
mm9_v1_chr6_+_71657791_71657963	1.72111	UCCCUUU	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr11_+_72832489_72832515	1.70975	UCCCUUU	AK144483|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha	NM_018883|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha
mm9_v1_chr6_+_86799460_86799754	1.70302	UCCCUUU	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr2_-_73730605_73730700	1.70185	UCCCUUU	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr16_-_28445276_28445356	1.69697	UCCCUUU	U66201|Fgf12|14167|fibroblast growth factor 12	AK034335|Fgf12|14167|fibroblast growth factor 12	NM_183064|Fgf12|14167|fibroblast growth factor 12	AF020738|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr18_-_43847367_43847426	1.6863	UCCCUUU	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr6_-_124764313_124764396	1.67796	UCCCUUU	NM_009415|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr10_+_84565370_84565389	1.67754	UCCCUUU	NM_001013028|AI597468|103266|expressed sequence AI597468
mm9_v1_chr12_+_89961317_89961336	1.67557	UCCCUUU	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr11_+_101414168_101414211	1.66194	UCCCUUU	NM_008676|Nbr1|17966|neighbor of Brca1 gene 1	U73039|Nbr1|17966|neighbor of Brca1 gene 1	AK128992|Nbr1|17966|neighbor of Brca1 gene 1	BC052709|Nbr1|17966|neighbor of Brca1 gene 1	AK154081|Nbr1|17966|neighbor of Brca1 gene 1	AK129043|Nbr1|17966|neighbor of Brca1 gene 1
mm9_v1_chr18_+_58038278_58038331	1.6594	UCCCUUU	NM_009194|Slc12a2|20496|solute carrier family 12, member 2	U13174|Slc12a2|20496|solute carrier family 12, member 2
mm9_v1_chr18_+_61123204_61123218	1.65541	UCCCUUU	NM_009792|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X87142|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr18_+_37133455_37133703	1.64347	UCCCUUU	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr18_+_37120093_37120209	1.6394	UCCCUUU	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr18_+_37157533_37157533	1.63218	UCCCUUU	AY013767|Pcdha9|192161|protocadherin alpha 9	NM_138661|Pcdha9|192161|protocadherin alpha 9
mm9_v1_chr18_+_37105758_37105860	1.62294	UCCCUUU	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr11_-_74403603_74403659	1.60967	UCCCUUU	NM_001015046|Rap1gap2|380711|RAP1 GTPase activating protein 2
mm9_v1_chr6_+_145882641_145882808	1.60387	UCCCUUU	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chrX_-_7318412_7318449	1.60367	UCCCUUU	BC053918|Ccdc120|54648|coiled-coil domain containing 120	NM_207202|Ccdc120|54648|coiled-coil domain containing 120
mm9_v1_chr13_+_98011057_98011069	1.59585	UCCCUUU	AK132173|Enc1|13803|ectodermal-neural cortex 1	NM_007930|Enc1|13803|ectodermal-neural cortex 1	AK044906|Enc1|13803|ectodermal-neural cortex 1	AK049187|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr6_+_118016385_118016436	1.59238	UCCCUUU	NM_027526|Rasgef1a|70727|RasGEF domain family, member 1A	BC138284|Rasgef1a|70727|RasGEF domain family, member 1A	BC145232|Rasgef1a|70727|RasGEF domain family, member 1A	BC145752|Rasgef1a|70727|RasGEF domain family, member 1A
mm9_v1_chr4_+_136025675_136025745	1.58945	UCCCUUU	AK139583|Luzp1|269593|leucine zipper protein 1	NM_024452|Luzp1|269593|leucine zipper protein 1	AK012514|Luzp1|269593|leucine zipper protein 1	BC026746|Luzp1|269593|leucine zipper protein 1
mm9_v1_chr4_-_137352181_137352292	1.57734	UCCCUUU	X13409|Alpl|11647|alkaline phosphatase, liver/bone/kidney	BC065175|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167481|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK166732|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK076459|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK161780|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167023|Alpl|11647|alkaline phosphatase, liver/bone/kidney	J02980|Alpl|11647|alkaline phosphatase, liver/bone/kidney	NM_007431|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK164002|Alpl|11647|alkaline phosphatase, liver/bone/kidney
mm9_v1_chr16_-_22657283_22657317	1.57065	UCCCUUU	AK083258|Dgkg|110197|diacylglycerol kinase, gamma	NM_138650|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chr4_+_34011567_34011625	1.56489	UCCCUUU	BC075644|Cnr1|12801|cannabinoid receptor 1 (brain)	BC070447|Cnr1|12801|cannabinoid receptor 1 (brain)	NM_007726|Cnr1|12801|cannabinoid receptor 1 (brain)	AY522554|Cnr1|12801|cannabinoid receptor 1 (brain)
mm9_v1_chr12_-_106103285_106103341	1.56011	UCCCUUU	AB047978|Clmn|94040|calmin	AB059643|Clmn|94040|calmin	AB059644|Clmn|94040|calmin	AB059645|Clmn|94040|calmin	AB059646|Clmn|94040|calmin	AB059647|Clmn|94040|calmin	AB059648|Clmn|94040|calmin	NM_001040682|Clmn|94040|calmin	NM_053155|Clmn|94040|calmin
mm9_v1_chr1_+_75207403_75207474	1.54817	UCCCUUU	NM_011494|Stk16|20872|serine/threonine kinase 16	AK032162|Stk16|20872|serine/threonine kinase 16	AK030404|Stk16|20872|serine/threonine kinase 16	AK149539|Stk16|20872|serine/threonine kinase 16	AF089869|Stk16|20872|serine/threonine kinase 16	BC005703|Stk16|20872|serine/threonine kinase 16	BC028999|Stk16|20872|serine/threonine kinase 16	AB022179|Stk16|20872|serine/threonine kinase 16	AK156554|Stk16|20872|serine/threonine kinase 16	AB017197|Stk16|20872|serine/threonine kinase 16	AJ005790|Stk16|20872|serine/threonine kinase 16
mm9_v1_chr5_+_15440508_15440728	1.53958	UCCCUUU	AK164580|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	NM_001110843|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	NM_001110844|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	NM_001110845|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	NM_001110846|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	NM_009784|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	AK084101|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	U73483|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	U73484|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	U73485|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	U73486|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	U73487|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	BC115871|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1	AK052898|Cacna2d1|12293|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm9_v1_chr6_-_55124983_55125038	1.52263	UCCCUUU	M88694|Inmt|21743|indolethylamine N-methyltransferase	NM_009349|Inmt|21743|indolethylamine N-methyltransferase	BC013518|Inmt|21743|indolethylamine N-methyltransferase	AK013010|Inmt|21743|indolethylamine N-methyltransferase	AK002281|Inmt|21743|indolethylamine N-methyltransferase
mm9_v1_chr5_-_92471976_92472071	1.51671	UCCCUUU	BC117894|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	BC117895|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029066|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_177270|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029065|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_016912|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK144574|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr1_-_192735594_192735689	1.50973	UCCCUUU	AK044809|Rps6kc1|320119|ribosomal protein S6 kinase polypeptide 1	AK149858|Rps6kc1|320119|ribosomal protein S6 kinase polypeptide 1	AK030313|Rps6kc1|320119|ribosomal protein S6 kinase polypeptide 1	NM_178775|Rps6kc1|320119|ribosomal protein S6 kinase polypeptide 1
mm9_v1_chr10_+_90039435_90039495	1.50664	UCCCUUU	AK032211|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177396|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK163750|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK132228|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK019361|Ipw|16353|imprinted gene in the Prader-Willi syndrome region	AK049899|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr11_-_61267383_61267510	1.50477	UCCCUUU	AB013097|Rnf112|22671|ring finger protein 112	BC013139|Rnf112|22671|ring finger protein 112	NM_009548|Rnf112|22671|ring finger protein 112	BC037118|Rnf112|22671|ring finger protein 112	AK131651|Rnf112|22671|ring finger protein 112
mm9_v1_chr15_+_102820969_102821018	1.5047	UCCCUUU	NM_010466|Hoxc8|15426|homeobox C8	X07439|Hoxc8|15426|homeobox C8
mm9_v1_chr13_-_105844882_105845009	1.49715	UCCCUUU	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr9_-_64869349_64869525	1.49574	UCCCUUU	Z97207|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	AK051735|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	AK159494|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	BC057023|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	BC031755|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	AK050556|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	AK052865|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1	NM_021345|Ptplad1|57874|protein tyrosine phosphatase-like A domain containing 1
mm9_v1_chr4_-_58566362_58566472	1.48261	UCCCUUU	NM_010336|Lpar1|14745|lysophosphatidic acid receptor 1	U70622|Lpar1|14745|lysophosphatidic acid receptor 1
mm9_v1_chr1_-_145624156_145624181	1.48112	UCCCUUU	AK076167|Trove2|20822|TROVE domain family, member 2	NM_013835|Trove2|20822|TROVE domain family, member 2
mm9_v1_chr2_+_32455168_32455228	1.4678	UCCCUUU	NM_001025311|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm9_v1_chr16_+_41533317_41533456	1.46541	UCCCUUU	AK140043|Lsamp|268890|limbic system-associated membrane protein	NM_175548|Lsamp|268890|limbic system-associated membrane protein	AK044845|Lsamp|268890|limbic system-associated membrane protein	AK140663|Lsamp|268890|limbic system-associated membrane protein
mm9_v1_chr15_+_25552273_25552341	1.46521	UCCCUUU	AK028552|Myo10|17909|myosin X	AK089482|Myo10|17909|myosin X	NM_019472|Myo10|17909|myosin X
mm9_v1_chr18_+_37152024_37152120	1.46117	UCCCUUU	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr15_+_80004048_80004240	1.45758	UCCCUUU	AK081850|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	NM_010795|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	BC053040|Mgat3|17309|mannoside acetylglucosaminyltransferase 3
mm9_v1_chr11_+_98603186_98603266	1.4484	UCCCUUU	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr6_-_136123521_136123528	1.44264	UCCCUUU	AJ459261|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AJ459262|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AJ459263|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	AK002963|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)	NM_008171|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr6_-_119146426_119146446	1.43344	UCCCUUU	AK052162|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_009781|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr1_+_174271338_174271373	1.43261	UCCCUUU	AK048864|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	NM_001039484|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr2_-_102291924_102291996	1.43119	UCCCUUU	AK051097|Fjx1|14221|four jointed box 1 (Drosophila)	BC051990|Fjx1|14221|four jointed box 1 (Drosophila)	NM_010218|Fjx1|14221|four jointed box 1 (Drosophila)
mm9_v1_chr12_+_16901671_16901783	1.43106	UCCCUUU	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr10_-_75244113_75244158	1.42685	UCCCUUU	BC057964|Gstt3|103140|glutathione S-transferase, theta 3	BC062201|Gstt3|103140|glutathione S-transferase, theta 3	AF508157|Gstt3|103140|glutathione S-transferase, theta 3	NM_133994|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr9_-_54349409_54349432	1.41705	UCCCUUU	AK170274|Dmxl2|235380|Dmx-like 2	AK048831|Dmxl2|235380|Dmx-like 2	AK053672|Dmxl2|235380|Dmx-like 2	NM_172771|Dmxl2|235380|Dmx-like 2
mm9_v1_chr8_+_87560809_87560830	1.40562	UCCCUUU	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr11_-_90252228_90252237	1.40018	UCCCUUU	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr15_+_85566122_85566257	1.39615	UCCCUUU	AK035676|Ppara|19013|peroxisome proliferator activated receptor alpha	NM_011144|Ppara|19013|peroxisome proliferator activated receptor alpha	BC016892|Ppara|19013|peroxisome proliferator activated receptor alpha
mm9_v1_chr7_+_106683983_106683997	1.38982	UCCCUUU	AK147508|Arrb1|109689|arrestin, beta 1	NM_177231|Arrb1|109689|arrestin, beta 1	NM_178220|Arrb1|109689|arrestin, beta 1
mm9_v1_chr11_-_69648350_69648356	1.3874	UCCCUUU	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr7_+_28043740_28043802	1.38338	UCCCUUU	NM_010950|Numbl|18223|numb-like
mm9_v1_chr9_+_40493989_40494055	1.35715	UCCCUUU	AK033723|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene	NM_133733|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr6_+_108733041_108733073	1.35404	UCCCUUU	NM_026011|Arl8b|67166|ADP-ribosylation factor-like 8B	AK030689|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr1_+_174056868_174056950	1.34249	UCCCUUU	AK029368|Pex19|19298|peroxisomal biogenesis factor 19	NM_001159525|Pex19|19298|peroxisomal biogenesis factor 19	NM_023041|Pex19|19298|peroxisomal biogenesis factor 19	AK028449|Pex19|19298|peroxisomal biogenesis factor 19	AK075576|Pex19|19298|peroxisomal biogenesis factor 19	AK170175|Pex19|19298|peroxisomal biogenesis factor 19	AK012785|Pex19|19298|peroxisomal biogenesis factor 19	BC019767|Pex19|19298|peroxisomal biogenesis factor 19	Y09046|Pex19|19298|peroxisomal biogenesis factor 19	CT010305|Pex19|19298|peroxisomal biogenesis factor 19	BC012517|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr18_-_68459958_68459986	1.3369	UCCCUUU	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr6_+_110595586_110595619	1.33414	UCCCUUU	BC080315|Grm7|108073|glutamate receptor, metabotropic 7	NM_177328|Grm7|108073|glutamate receptor, metabotropic 7
mm9_v1_chr6_-_144997311_144997331	1.33081	UCCCUUU	AK036309|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_001024468|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr11_-_97879685_97879687	1.32225	UCCCUUU	AK036404|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_001159320|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit
mm9_v1_chr18_-_72510670_72510722	1.32087	UCCCUUU	AK157715|Dcc|13176|deleted in colorectal carcinoma	AK090377|Dcc|13176|deleted in colorectal carcinoma	NM_007831|Dcc|13176|deleted in colorectal carcinoma
mm9_v1_chr12_+_25257147_25257167	1.32064	UCCCUUU	NM_001161406|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK167035|Grhl1|195733|grainyhead-like 1 (Drosophila)	BC037233|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK076307|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr9_-_26837634_26837702	1.31733	UCCCUUU	AK155578|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK171154|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	BC049180|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK031589|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	NM_178027|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr8_-_41720091_41720170	1.30493	UCCCUUU	AK028160|Mtmr7|54384|myotubularin related protein 7	AK081973|Mtmr7|54384|myotubularin related protein 7	BC032254|Mtmr7|54384|myotubularin related protein 7	AK148768|Mtmr7|54384|myotubularin related protein 7	NM_001040699|Mtmr7|54384|myotubularin related protein 7
mm9_v1_chr6_-_24905939_24906124	1.30312	UCCCUUU	BC147241|Tmem229a|319832|transmembrane protein 229A	BC147242|Tmem229a|319832|transmembrane protein 229A	AK140056|Tmem229a|319832|transmembrane protein 229A	AK087465|Tmem229a|319832|transmembrane protein 229A	NM_177013|Tmem229a|319832|transmembrane protein 229A
mm9_v1_chr18_-_24688688_24688704	1.30235	UCCCUUU	AK220475|Rprd1a|225283|regulation of nuclear pre-mRNA domain containing 1A	NM_144861|Rprd1a|225283|regulation of nuclear pre-mRNA domain containing 1A
mm9_v1_chr11_-_87800086_87800086	1.30004	UCCCUUU	NM_001168472|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr6_-_124414668_124414803	1.29443	UCCCUUU	AJ278486|Clstn3|232370|calsyntenin 3	BC055054|Clstn3|232370|calsyntenin 3	AK032336|Clstn3|232370|calsyntenin 3	NM_153508|Clstn3|232370|calsyntenin 3
mm9_v1_chr8_-_126506977_126507021	1.28974	UCCCUUU	BC046818|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	BC053020|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	BC054793|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	NM_019552|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10
mm9_v1_chr12_-_82633781_82633909	1.28822	UCCCUUU	AY138960|Synj2bp|24071|synaptojanin 2 binding protein	BC027433|Synj2bp|24071|synaptojanin 2 binding protein	AK013474|Synj2bp|24071|synaptojanin 2 binding protein	AK163362|Synj2bp|24071|synaptojanin 2 binding protein	AK008254|Synj2bp|24071|synaptojanin 2 binding protein	AY566156|Synj2bp|24071|synaptojanin 2 binding protein	AK008054|Synj2bp|24071|synaptojanin 2 binding protein	AK078422|Synj2bp|24071|synaptojanin 2 binding protein	AK030379|Synj2bp|24071|synaptojanin 2 binding protein	AK033514|Synj2bp|24071|synaptojanin 2 binding protein	NM_025292|Synj2bp|24071|synaptojanin 2 binding protein
mm9_v1_chr2_+_163428044_163428072	1.28619	UCCCUUU	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr9_-_112090150_112090479	1.2848	UCCCUUU	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr14_-_21871647_21871707	1.28154	UCCCUUU	AF242857|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	NM_018829|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr18_+_37303622_37303622	1.27826	UCCCUUU	AY013769|Pcdhac2|353237|protocadherin alpha subfamily C, 2	NM_001003672|Pcdhac2|353237|protocadherin alpha subfamily C, 2
mm9_v1_chr10_-_80693488_80693567	1.2703	UCCCUUU	AY349150|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	BC048903|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038990|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	NM_178662|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK039411|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK028298|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038483|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK162959|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK086723|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)
mm9_v1_chr10_+_105907394_105907408	1.25736	UCCCUUU	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr7_-_77505248_77505478	1.25423	UCCCUUU	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr7_+_52419289_52419313	1.25377	UCCCUUU	NM_182993|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr11_+_52174313_52174633	1.25114	UCCCUUU	AK002740|Vdac1|22333|voltage-dependent anion channel 1	AK169282|Vdac1|22333|voltage-dependent anion channel 1	AK168672|Vdac1|22333|voltage-dependent anion channel 1	AK169160|Vdac1|22333|voltage-dependent anion channel 1	AK169354|Vdac1|22333|voltage-dependent anion channel 1	AK146239|Vdac1|22333|voltage-dependent anion channel 1	AK167860|Vdac1|22333|voltage-dependent anion channel 1	AK168225|Vdac1|22333|voltage-dependent anion channel 1	NM_011694|Vdac1|22333|voltage-dependent anion channel 1	U30840|Vdac1|22333|voltage-dependent anion channel 1	AK153094|Vdac1|22333|voltage-dependent anion channel 1	AK169671|Vdac1|22333|voltage-dependent anion channel 1	BC092257|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr14_-_22808822_22808822	1.24929	UCCCUUU	BC066027|Zfp503|218820|zinc finger protein 503	NM_145459|Zfp503|218820|zinc finger protein 503
mm9_v1_chr14_-_100548982_100549014	1.2482	UCCCUUU	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr11_+_68781623_68781690	1.2449	UCCCUUU	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr8_+_86423968_86424035	1.24272	UCCCUUU	NM_181039|Lphn1|330814|latrophilin 1	AK147455|Lphn1|330814|latrophilin 1
mm9_v1_chr5_+_148768875_148768913	1.21815	UCCCUUU	AK147457|Mtus2|77521|microtubule associated tumor suppressor candidate 2	NM_029920|Mtus2|77521|microtubule associated tumor suppressor candidate 2
mm9_v1_chr11_-_87172419_87172533	1.21525	UCCCUUU	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr5_-_136410488_136410547	1.21514	UCCCUUU	NM_018871|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr10_+_87323855_87324094	1.21369	UCCCUUU	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr15_-_102993714_102993747	1.20025	UCCCUUU	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr2_-_57905140_57905276	1.19949	UCCCUUU	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr3_+_66023808_66023844	1.19199	UCCCUUU	NM_008987|Ptx3|19288|pentraxin related gene	BC022176|Ptx3|19288|pentraxin related gene
mm9_v1_chr2_+_134611879_134611910	1.18934	UCCCUUU	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr12_-_47919695_47919761	1.18125	UCCCUUU	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr2_+_24909898_24909973	1.17158	UCCCUUU	NM_001039386|Nelf|56876|nasal embryonic LHRH factor	NM_001039387|Nelf|56876|nasal embryonic LHRH factor	NM_001177654|Nelf|56876|nasal embryonic LHRH factor	NM_001177655|Nelf|56876|nasal embryonic LHRH factor	NM_020276|Nelf|56876|nasal embryonic LHRH factor	AK004986|Nelf|56876|nasal embryonic LHRH factor	AK041478|Nelf|56876|nasal embryonic LHRH factor	AK158803|Nelf|56876|nasal embryonic LHRH factor	AF266508|Nelf|56876|nasal embryonic LHRH factor	AK019560|Nelf|56876|nasal embryonic LHRH factor	BC006642|Nelf|56876|nasal embryonic LHRH factor	AK053402|Nelf|56876|nasal embryonic LHRH factor	AK165300|Nelf|56876|nasal embryonic LHRH factor
mm9_v1_chr19_-_5349573_5349573	1.16948	UCCCUUU	AK078116|Cst6|73720|cystatin E/M	NM_028623|Cst6|73720|cystatin E/M
mm9_v1_chr15_-_90509751_90509818	1.16868	UCCCUUU	AK005311|Cpne8|66871|copine VIII	BC076564|Cpne8|66871|copine VIII	BC017626|Cpne8|66871|copine VIII	AK013407|Cpne8|66871|copine VIII	AK004559|Cpne8|66871|copine VIII	BC138745|Cpne8|66871|copine VIII	BC138746|Cpne8|66871|copine VIII	AK010227|Cpne8|66871|copine VIII	BC048551|Cpne8|66871|copine VIII	NM_001033851|Cpne8|66871|copine VIII	NM_025815|Cpne8|66871|copine VIII
mm9_v1_chr19_+_53403902_53404133	1.16419	UCCCUUU	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr2_+_19293231_19293294	1.16332	UCCCUUU	BC021619|Msrb2|76467|methionine sulfoxide reductase B2	NM_029619|Msrb2|76467|methionine sulfoxide reductase B2	AK009912|Msrb2|76467|methionine sulfoxide reductase B2
mm9_v1_chr9_+_34296315_34296391	1.14786	UCCCUUU	NM_001190911|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190912|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190913|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190914|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_026324|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK013621|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AY169782|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK034142|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK079332|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chr8_-_72644704_72644742	1.14197	UCCCUUU	X84727|Ncan|13004|neurocan	BC065118|Ncan|13004|neurocan	NM_007789|Ncan|13004|neurocan
mm9_v1_chr6_-_128476708_128476738	1.13991	UCCCUUU	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr9_+_74885420_74885510	1.13881	UCCCUUU	NM_001142655|Arpp19|59046|cAMP-regulated phosphoprotein 19	AK076052|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr9_+_74885522_74885560	1.13365	UCCCUUU	BC040206|Arpp19|59046|cAMP-regulated phosphoprotein 19	NM_021548|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr9_-_43047862_43047949	1.13262	UCCCUUU	BC026022|Oaf|102644|OAF homolog (Drosophila)	BC034836|Oaf|102644|OAF homolog (Drosophila)	AK150279|Oaf|102644|OAF homolog (Drosophila)	BC025514|Oaf|102644|OAF homolog (Drosophila)	AK051349|Oaf|102644|OAF homolog (Drosophila)	NM_178644|Oaf|102644|OAF homolog (Drosophila)
mm9_v1_chrX_-_99839480_99839617	1.13261	UCCCUUU	X74616|Phka1|18679|phosphorylase kinase alpha 1	AK137497|Phka1|18679|phosphorylase kinase alpha 1	AK036440|Phka1|18679|phosphorylase kinase alpha 1	AK030426|Phka1|18679|phosphorylase kinase alpha 1	NM_008832|Phka1|18679|phosphorylase kinase alpha 1	NM_173021|Phka1|18679|phosphorylase kinase alpha 1
mm9_v1_chr18_+_23910833_23910892	1.13134	UCCCUUU	AK158570|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162942|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK168834|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr9_-_52487410_52487541	1.12351	UCCCUUU	BC109328|AI593442|330941|expressed sequence AI593442	NM_178906|AI593442|330941|expressed sequence AI593442	AK033979|AI593442|330941|expressed sequence AI593442
mm9_v1_chr13_-_3892788_3892823	1.12007	UCCCUUU	AJ010045|Net1|56349|neuroepithelial cell transforming gene 1	AK020636|Net1|56349|neuroepithelial cell transforming gene 1	AK088632|Net1|56349|neuroepithelial cell transforming gene 1	AK139921|Net1|56349|neuroepithelial cell transforming gene 1	BC004699|Net1|56349|neuroepithelial cell transforming gene 1	AK082128|Net1|56349|neuroepithelial cell transforming gene 1	NM_001047159|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chr5_-_93473976_93474047	1.1183	UCCCUUU	AK033423|Ankrd56|78088|ankyrin repeat domain 56	AK137429|Ankrd56|78088|ankyrin repeat domain 56	NM_175270|Ankrd56|78088|ankyrin repeat domain 56
mm9_v1_chr9_-_103664100_103664222	1.11421	UCCCUUU	BC052085|Tmem108|81907|transmembrane protein 108	AK077586|Tmem108|81907|transmembrane protein 108	AK044989|Tmem108|81907|transmembrane protein 108	AK047474|Tmem108|81907|transmembrane protein 108	AK086266|Tmem108|81907|transmembrane protein 108	AK141589|Tmem108|81907|transmembrane protein 108	AK052330|Tmem108|81907|transmembrane protein 108	NM_178638|Tmem108|81907|transmembrane protein 108
mm9_v1_chr4_+_54960816_54960816	1.11034	UCCCUUU	NM_172867|Zfp462|242466|zinc finger protein 462
mm9_v1_chr11_-_6174828_6174898	1.10963	UCCCUUU	BC023041|Tmed4|103694|transmembrane emp24 protein transport domain containing 4	NM_134020|Tmed4|103694|transmembrane emp24 protein transport domain containing 4	AK078425|Tmed4|103694|transmembrane emp24 protein transport domain containing 4	AF368921|Tmed4|103694|transmembrane emp24 protein transport domain containing 4	AK158876|Tmed4|103694|transmembrane emp24 protein transport domain containing 4
mm9_v1_chr5_+_67651890_67652024	1.1056	UCCCUUU	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chr15_-_94420206_94420335	1.10289	UCCCUUU	AY267188|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK193163|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK147990|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	BC094034|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	NM_008971|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	U82324|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	BC015081|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK168142|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK168161|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK150852|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)	AK077410|Twf1|19230|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm9_v1_chr19_+_7492081_7492131	1.09982	UCCCUUU	NM_175381|2700081O15Rik|108899|RIKEN cDNA 2700081O15 gene
mm9_v1_chr15_+_94459521_94459680	1.09778	UCCCUUU	AK047437|Tmem117|320709|transmembrane protein 117	NM_178789|Tmem117|320709|transmembrane protein 117	AK048597|Tmem117|320709|transmembrane protein 117	AK034024|Tmem117|320709|transmembrane protein 117	BC051178|Tmem117|320709|transmembrane protein 117	BC054070|Tmem117|320709|transmembrane protein 117
mm9_v1_chr5_+_130549195_130549195	1.09714	UCCCUUU	AF038008|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_013837|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr19_-_19075535_19075606	1.09652	UCCCUUU	DQ779924|Rorb|225998|RAR-related orphan receptor beta	BC024768|Rorb|225998|RAR-related orphan receptor beta	AK044421|Rorb|225998|RAR-related orphan receptor beta	BC024842|Rorb|225998|RAR-related orphan receptor beta	NM_146095|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr19_-_19185685_19185685	1.09101	UCCCUUU	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr1_-_58642994_58643176	1.08976	UCCCUUU	AK052638|Fam126b|213056|family with sequence similarity 126, member B	BC068302|Fam126b|213056|family with sequence similarity 126, member B	AK144602|Fam126b|213056|family with sequence similarity 126, member B	BC049806|Fam126b|213056|family with sequence similarity 126, member B	AK168372|Fam126b|213056|family with sequence similarity 126, member B	NM_172513|Fam126b|213056|family with sequence similarity 126, member B
mm9_v1_chr6_+_57652448_57652452	1.0835	UCCCUUU	NM_133737|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr4_-_95807732_95807842	1.08014	UCCCUUU	NM_001100182|Cyp2j12-ps|242546|cytochrome P450, family 2, subfamily j, polypeptide 12, pseudogene	AK136922|Cyp2j12-ps|242546|cytochrome P450, family 2, subfamily j, polypeptide 12, pseudogene
mm9_v1_chr15_+_85565935_85565993	1.07462	UCCCUUU	AK081709|Ppara|19013|peroxisome proliferator activated receptor alpha	NM_001113418|Ppara|19013|peroxisome proliferator activated receptor alpha
mm9_v1_chr3_-_32981940_32981960	1.06932	UCCCUUU	AB032591|Pex5l|58869|peroxisomal biogenesis factor 5-like	AK039764|Pex5l|58869|peroxisomal biogenesis factor 5-like	NM_021483|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr8_-_70498472_70498472	1.06023	UCCCUUU	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr5_+_101275148_101275382	1.05341	UCCCUUU	AK030171|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_172715|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	AK160261|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	BC096769|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	AK138410|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9
mm9_v1_chr11_+_87405628_87405720	1.04101	UCCCUUU	AF262986|Mtmr4|170749|myotubularin related protein 4	NM_133215|Mtmr4|170749|myotubularin related protein 4	BC058091|Mtmr4|170749|myotubularin related protein 4	BC058364|Mtmr4|170749|myotubularin related protein 4
mm9_v1_chr9_+_62705890_62705945	1.03845	UCCCUUU	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr8_+_109674517_109674597	1.03714	UCCCUUU	BC054749|Cyb5b|66427|cytochrome b5 type B	BC062980|Cyb5b|66427|cytochrome b5 type B	AK003333|Cyb5b|66427|cytochrome b5 type B	AK088970|Cyb5b|66427|cytochrome b5 type B	AK165543|Cyb5b|66427|cytochrome b5 type B	AK052810|Cyb5b|66427|cytochrome b5 type B	NM_025558|Cyb5b|66427|cytochrome b5 type B	AK019263|Cyb5b|66427|cytochrome b5 type B	BC048147|Cyb5b|66427|cytochrome b5 type B	AK003815|Cyb5b|66427|cytochrome b5 type B	AK168422|Cyb5b|66427|cytochrome b5 type B	AK166544|Cyb5b|66427|cytochrome b5 type B	BC046810|Cyb5b|66427|cytochrome b5 type B	BC046479|Cyb5b|66427|cytochrome b5 type B	BC058812|Cyb5b|66427|cytochrome b5 type B
mm9_v1_chr4_+_117222924_117223239	1.03592	UCCCUUU	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr11_-_119089774_119089812	1.02828	UCCCUUU	BC057634|Tbc1d16|207592|TBC1 domain family, member 16	AK047555|Tbc1d16|207592|TBC1 domain family, member 16	NM_172443|Tbc1d16|207592|TBC1 domain family, member 16
mm9_v1_chr1_-_167564449_167564681	1.02508	UCCCUUU	AK192253|Mpzl1|68481|myelin protein zero-like 1	AK192408|Mpzl1|68481|myelin protein zero-like 1	AK193736|Mpzl1|68481|myelin protein zero-like 1	AK197743|Mpzl1|68481|myelin protein zero-like 1	AY764248|Mpzl1|68481|myelin protein zero-like 1	BC072563|Mpzl1|68481|myelin protein zero-like 1	AK090278|Mpzl1|68481|myelin protein zero-like 1	AK169385|Mpzl1|68481|myelin protein zero-like 1	AY764247|Mpzl1|68481|myelin protein zero-like 1	NM_001001880|Mpzl1|68481|myelin protein zero-like 1	NM_001083897|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr9_+_55056740_55056801	1.0213	UCCCUUU	NM_028049|Fbxo22|71999|F-box protein 22	AK002745|Fbxo22|71999|F-box protein 22	BC018273|Fbxo22|71999|F-box protein 22
mm9_v1_chr6_-_57485419_57485488	1.01887	UCCCUUU	BC092238|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	NM_175523|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	AK044610|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)
mm9_v1_chr12_-_5382487_5382487	1.01763	UCCCUUU	BC065168|Klhl29|208439|kelch-like 29 (Drosophila)	NM_001164493|Klhl29|208439|kelch-like 29 (Drosophila)
mm9_v1_chr5_+_122161617_122161617	1.01434	UCCCUUU	AF041472|Atxn2|20239|ataxin 2	NM_009125|Atxn2|20239|ataxin 2
mm9_v1_chr1_+_173080843_173080843	1.01376	UCCCUUU	AK089180|Mpz|17528|myelin protein zero	NM_008623|Mpz|17528|myelin protein zero
mm9_v1_chr5_-_24606422_24606505	1.00679	UCCCUUU	AK154296|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_145401|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr18_-_12464213_12464228	0.999507	UCCCUUU	NM_001190371|Ankrd29|225187|ankyrin repeat domain 29
mm9_v1_chr4_+_106584074_106584164	0.986463	UCCCUUU	AK017711|Ssbp3|72475|single-stranded DNA binding protein 3	NM_023672|Ssbp3|72475|single-stranded DNA binding protein 3	NM_198438|Ssbp3|72475|single-stranded DNA binding protein 3	AK011853|Ssbp3|72475|single-stranded DNA binding protein 3	BC035475|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr18_+_74602260_74602279	0.983296	UCCCUUU	BC030481|Myo5b|17919|myosin VB	NM_201600|Myo5b|17919|myosin VB	BC118525|Myo5b|17919|myosin VB
mm9_v1_chr5_-_87335956_87335985	0.978255	UCCCUUU	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr8_+_13159112_13159277	0.975529	UCCCUUU	NM_010684|Lamp1|16783|lysosomal-associated membrane protein 1	BC049097|Lamp1|16783|lysosomal-associated membrane protein 1	AY069968|Lamp1|16783|lysosomal-associated membrane protein 1	AK172007|Lamp1|16783|lysosomal-associated membrane protein 1	AK159096|Lamp1|16783|lysosomal-associated membrane protein 1	AK004637|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr10_+_99478457_99478639	0.97521	UCCCUUU	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr4_+_42965965_42965965	0.970247	UCCCUUU	BC057087|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	NM_019874|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr2_+_125860377_125860409	0.968743	UCCCUUU	AK037172|Fgf7|14178|fibroblast growth factor 7	NM_008008|Fgf7|14178|fibroblast growth factor 7
mm9_v1_chr14_+_67852128_67852128	0.962683	UCCCUUU	AK053013|Ebf2|13592|early B-cell factor 2	NM_010095|Ebf2|13592|early B-cell factor 2
mm9_v1_chr19_+_5474686_5474769	0.962257	UCCCUUU	NM_021474|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AK075585|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	NM_001164352|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AF109122|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chr2_+_90780614_90780617	0.958593	UCCCUUU	NM_017368|Celf1|13046|CUGBP, Elav-like family member 1	NM_198683|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr8_+_87561055_87561132	0.95371	UCCCUUU	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr9_+_44925922_44925963	0.948472	UCCCUUU	NM_001014761|Scn2b|72821|sodium channel, voltage-gated, type II, beta	AB118947|Scn2b|72821|sodium channel, voltage-gated, type II, beta	BC092225|Scn2b|72821|sodium channel, voltage-gated, type II, beta
mm9_v1_chrX_+_53862956_53863040	0.941974	UCCCUUU	NM_172780|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK032326|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	BC130221|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK122232|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm9_v1_chr1_+_39251056_39251116	0.941091	UCCCUUU	U77969|Npas2|18143|neuronal PAS domain protein 2	BC109166|Npas2|18143|neuronal PAS domain protein 2	NM_008719|Npas2|18143|neuronal PAS domain protein 2
mm9_v1_chr1_-_172018982_172019074	0.940703	UCCCUUU	AK196844|Ddr2|18214|discoidin domain receptor family, member 2	NM_022563|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr7_-_123138599_123138599	0.93492	UCCCUUU	NM_011445|Sox6|20679|SRY-box containing gene 6	U32614|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr9_+_37209586_37209656	0.934273	UCCCUUU	BC071193|Robo4|74144|roundabout homolog 4 (Drosophila)	AF536772|Robo4|74144|roundabout homolog 4 (Drosophila)	AK004723|Robo4|74144|roundabout homolog 4 (Drosophila)	NM_028783|Robo4|74144|roundabout homolog 4 (Drosophila)	AK087355|Robo4|74144|roundabout homolog 4 (Drosophila)
mm9_v1_chr14_-_35401654_35401841	0.932588	UCCCUUU	AF228057|Ldb3|24131|LIM domain binding 3	AF228058|Ldb3|24131|LIM domain binding 3	AY206011|Ldb3|24131|LIM domain binding 3	AY206015|Ldb3|24131|LIM domain binding 3	AK172980|Ldb3|24131|LIM domain binding 3	NM_001039074|Ldb3|24131|LIM domain binding 3	BC138793|Ldb3|24131|LIM domain binding 3	BC145420|Ldb3|24131|LIM domain binding 3	AK142292|Ldb3|24131|LIM domain binding 3	AF114378|Ldb3|24131|LIM domain binding 3	AY206012|Ldb3|24131|LIM domain binding 3	AF114379|Ldb3|24131|LIM domain binding 3	AY206013|Ldb3|24131|LIM domain binding 3	BC099596|Ldb3|24131|LIM domain binding 3
mm9_v1_chr5_-_144670646_144670709	0.931831	UCCCUUU	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr17_+_24625709_24625729	0.927579	UCCCUUU	NM_027937|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr19_+_47303332_47303400	0.927533	UCCCUUU	NM_001163480|Neurl1a|18011|neuralized homolog 1A (Drosophila)	AF401228|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr13_-_3917356_3917465	0.924535	UCCCUUU	AF094520|Net1|56349|neuroepithelial cell transforming gene 1	AK077728|Net1|56349|neuroepithelial cell transforming gene 1	NM_019671|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chrX_+_53599573_53599586	0.921185	UCCCUUU	AK142888|Zfp449|78619|zinc finger protein 449	AK036596|Zfp449|78619|zinc finger protein 449	NM_030139|Zfp449|78619|zinc finger protein 449	AK020600|Zfp449|78619|zinc finger protein 449
mm9_v1_chr11_-_76322920_76322935	0.912537	UCCCUUU	BC058708|Abr|109934|active BCR-related gene	NM_198018|Abr|109934|active BCR-related gene
mm9_v1_chr11_-_76660476_76660569	0.912005	UCCCUUU	AK142583|Cpd|12874|carboxypeptidase D	AK134907|Cpd|12874|carboxypeptidase D	AK137737|Cpd|12874|carboxypeptidase D	D85391|Cpd|12874|carboxypeptidase D	NM_007754|Cpd|12874|carboxypeptidase D
mm9_v1_chr18_+_37637421_37637642	0.906873	UCCCUUU	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr9_-_79641213_79641236	0.904184	UCCCUUU	AK077065|Tmem30a|69981|transmembrane protein 30A	NM_133718|Tmem30a|69981|transmembrane protein 30A
mm9_v1_chr13_+_41012969_41013020	0.901106	UCCCUUU	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr8_+_85387234_85387370	0.897772	UCCCUUU	AK032722|Rnf150|330812|ring finger protein 150	AK041412|Rnf150|330812|ring finger protein 150	NM_177378|Rnf150|330812|ring finger protein 150	AK220374|Rnf150|330812|ring finger protein 150
mm9_v1_chr5_-_124022937_124023057	0.896108	UCCCUUU	AK194964|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AF439858|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK019463|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK140553|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150282|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150550|Vps33a|77573|vacuolar protein sorting 33A (yeast)	BC046417|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK041982|Vps33a|77573|vacuolar protein sorting 33A (yeast)	NM_029929|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr2_-_120796395_120796492	0.891983	UCCCUUU	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr2_+_174123359_174123359	0.889921	UCCCUUU	AY519501|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY519502|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY519503|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY519504|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_001077507|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_010309|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_201617|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_201618|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr17_-_23877115_23877392	0.889584	UCCCUUU	AK044092|Paqr4|76498|progestin and adipoQ receptor family member IV	AB041564|Paqr4|76498|progestin and adipoQ receptor family member IV	AY424293|Paqr4|76498|progestin and adipoQ receptor family member IV	BC026921|Paqr4|76498|progestin and adipoQ receptor family member IV	AK152676|Paqr4|76498|progestin and adipoQ receptor family member IV	BC011185|Paqr4|76498|progestin and adipoQ receptor family member IV	NM_023824|Paqr4|76498|progestin and adipoQ receptor family member IV	AK033625|Paqr4|76498|progestin and adipoQ receptor family member IV	AK005142|Paqr4|76498|progestin and adipoQ receptor family member IV	AK044486|Paqr4|76498|progestin and adipoQ receptor family member IV
mm9_v1_chr2_-_165213726_165213791	0.887309	UCCCUUU	BC040388|Zfp334|228876|zinc finger protein 334	NM_178411|Zfp334|228876|zinc finger protein 334
mm9_v1_chr1_+_137904795_137904795	0.877873	UCCCUUU	NM_001160145|Tmem9|66241|transmembrane protein 9
mm9_v1_chr7_+_107376116_107376219	0.877617	UCCCUUU	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr11_-_51570335_51570335	0.875995	UCCCUUU	NM_175255|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)
mm9_v1_chr7_-_31699850_31699885	0.869856	UCCCUUU	M31811|Mag|17136|myelin-associated glycoprotein	NM_010758|Mag|17136|myelin-associated glycoprotein	AK003029|Mag|17136|myelin-associated glycoprotein
mm9_v1_chr19_+_53384990_53385011	0.869131	UCCCUUU	NM_001008542|Mxi1|17859|Max interacting protein 1	AK154538|Mxi1|17859|Max interacting protein 1	BC064453|Mxi1|17859|Max interacting protein 1
mm9_v1_chr2_+_32462471_32462603	0.86327	UCCCUUU	NM_001025310|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	NM_016973|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK157562|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK159158|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC036985|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AB035123|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC022924|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm9_v1_chr3_+_130320365_130320530	0.86236	UCCCUUU	AK049937|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	NM_001163587|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	AK030395|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	AK005060|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	NM_027907|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC043680|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC022644|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC058592|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1
mm9_v1_chr9_+_77956998_77957048	0.858266	UCCCUUU	AK154185|Ick|56542|intestinal cell kinase	NM_001163780|Ick|56542|intestinal cell kinase
mm9_v1_chr2_+_25036276_25036300	0.856502	UCCCUUU	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr6_-_120443824_120443824	0.851475	UCCCUUU	AF277399|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	BC137862|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	NM_033567|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)
mm9_v1_chr17_+_28829512_28829512	0.8504	UCCCUUU	AK151348|Mapk14|26416|mitogen-activated protein kinase 14	AK153025|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168513|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr4_+_114079291_114079328	0.848707	UCCCUUU	NM_001085549|Gm12824|666048|predicted gene 12824
mm9_v1_chr5_+_138526303_138526341	0.848433	UCCCUUU	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr14_+_35188650_35188769	0.845752	UCCCUUU	AK134285|Mmrn2|105450|multimerin 2	AK077884|Mmrn2|105450|multimerin 2	NM_153127|Mmrn2|105450|multimerin 2	AK078470|Mmrn2|105450|multimerin 2	BC034871|Mmrn2|105450|multimerin 2	BC145845|Mmrn2|105450|multimerin 2
mm9_v1_chr11_+_74462965_74463046	0.840289	UCCCUUU	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr7_-_52184840_52184904	0.837079	UCCCUUU	NM_001077264|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit	NM_007458|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr3_+_108087046_108087050	0.834708	UCCCUUU	BC056343|Sort1|20661|sortilin 1	NM_019972|Sort1|20661|sortilin 1
mm9_v1_chr10_-_75807976_75808035	0.828503	UCCCUUU	AK052899|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	NM_001081419|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	AK050040|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm9_v1_chr6_-_28781687_28781746	0.8276	UCCCUUU	BC117833|Lrrc4|192198|leucine rich repeat containing 4	BC117834|Lrrc4|192198|leucine rich repeat containing 4	AF300458|Lrrc4|192198|leucine rich repeat containing 4	BC012209|Lrrc4|192198|leucine rich repeat containing 4	DQ177325|Lrrc4|192198|leucine rich repeat containing 4	NM_138682|Lrrc4|192198|leucine rich repeat containing 4
mm9_v1_chr14_-_24823370_24823426	0.821134	UCCCUUU	AK142894|Kcnma1|16531|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC065068|Kcnma1|16531|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	NM_010610|Kcnma1|16531|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
mm9_v1_chr4_+_47220883_47221121	0.819774	UCCCUUU	NM_009928|Col15a1|12819|collagen, type XV, alpha 1	BC052428|Col15a1|12819|collagen, type XV, alpha 1	AF011450|Col15a1|12819|collagen, type XV, alpha 1	AK134030|Col15a1|12819|collagen, type XV, alpha 1
mm9_v1_chr2_+_174155592_174155844	0.819554	UCCCUUU	AK147051|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_001077510|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC080816|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC061496|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK168996|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC013824|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC013840|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	Y00703|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC106133|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC092055|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr1_-_107253245_107253286	0.816698	UCCCUUU	AK044638|Rnf152|320311|ring finger protein 152	NM_001160368|Rnf152|320311|ring finger protein 152	NM_178779|Rnf152|320311|ring finger protein 152
mm9_v1_chr15_-_75844738_75844807	0.814355	UCCCUUU	BC117947|Fam83h|105732|family with sequence similarity 83, member H	BC117948|Fam83h|105732|family with sequence similarity 83, member H	AK035531|Fam83h|105732|family with sequence similarity 83, member H	NM_134087|Fam83h|105732|family with sequence similarity 83, member H
mm9_v1_chr12_-_4484059_4484074	0.812095	UCCCUUU	NM_010881|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr15_+_10882086_10882145	0.809943	UCCCUUU	AK128898|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	AF246265|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	AK029352|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	AK075867|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	AK081704|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	NM_030888|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	BC055047|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	BC019636|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3	BC055859|C1qtnf3|81799|C1q and tumor necrosis factor related protein 3
mm9_v1_chr3_-_107499460_107499466	0.809681	UCCCUUU	NM_145542|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr5_-_71233855_71233855	0.806071	UCCCUUU	AK034332|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1	NM_010252|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm9_v1_chr8_-_30330079_30330107	0.805783	UCCCUUU	AJ487854|Unc5d|210801|unc-5 homolog D (C. elegans)	NM_153135|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr7_-_77511607_77511666	0.801873	UCCCUUU	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr5_-_76733540_76733585	0.788548	UCCCUUU	AF000998|Clock|12753|circadian locomotor output cycles kaput	NM_007715|Clock|12753|circadian locomotor output cycles kaput
mm9_v1_chr18_-_70212948_70213022	0.787625	UCCCUUU	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr9_-_42924626_42924652	0.786874	UCCCUUU	AK128910|Tmem136|235300|transmembrane protein 136	BC139046|Tmem136|235300|transmembrane protein 136	BC139047|Tmem136|235300|transmembrane protein 136	AK158698|Tmem136|235300|transmembrane protein 136	NM_001034863|Tmem136|235300|transmembrane protein 136
mm9_v1_chr19_+_5038825_5038950	0.775755	UCCCUUU	AK158899|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_175383|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK050347|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC069927|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK083857|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
mm9_v1_chr8_+_24521967_24522003	0.775326	UCCCUUU	AK088868|Sfrp1|20377|secreted frizzled-related protein 1	NM_013834|Sfrp1|20377|secreted frizzled-related protein 1	BC094662|Sfrp1|20377|secreted frizzled-related protein 1	U88566|Sfrp1|20377|secreted frizzled-related protein 1	BC024495|Sfrp1|20377|secreted frizzled-related protein 1
mm9_v1_chr1_+_137914574_137914625	0.774851	UCCCUUU	NM_025439|Tmem9|66241|transmembrane protein 9	AK005248|Tmem9|66241|transmembrane protein 9	AK021225|Tmem9|66241|transmembrane protein 9	AK154423|Tmem9|66241|transmembrane protein 9	BC016524|Tmem9|66241|transmembrane protein 9	AK134909|Tmem9|66241|transmembrane protein 9	BC048017|Tmem9|66241|transmembrane protein 9	BC020291|Tmem9|66241|transmembrane protein 9
mm9_v1_chr6_-_92164804_92164868	0.772163	UCCCUUU	BC049106|Zfyve20|78287|zinc finger, FYVE domain containing 20	NM_030081|Zfyve20|78287|zinc finger, FYVE domain containing 20	AK019909|Zfyve20|78287|zinc finger, FYVE domain containing 20	BC017622|Zfyve20|78287|zinc finger, FYVE domain containing 20
mm9_v1_chr10_-_52101880_52101956	0.771122	UCCCUUU	BC051171|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	NM_053187|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	AK171881|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr6_+_43215604_43215702	0.769699	UCCCUUU	NM_133674|Arhgef5|54324|Rho guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr18_+_77183105_77183189	0.758509	UCCCUUU	NM_001039201|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK147794|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2
mm9_v1_chr1_+_189821727_189821874	0.75734	UCCCUUU	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr5_-_148537561_148537595	0.755332	UCCCUUU	X78568|Flt1|14254|FMS-like tyrosine kinase 1	D88689|Flt1|14254|FMS-like tyrosine kinase 1	D88690|Flt1|14254|FMS-like tyrosine kinase 1	NM_010228|Flt1|14254|FMS-like tyrosine kinase 1	AK005502|Flt1|14254|FMS-like tyrosine kinase 1	AK013236|Flt1|14254|FMS-like tyrosine kinase 1	AK167596|Flt1|14254|FMS-like tyrosine kinase 1	AK146906|Flt1|14254|FMS-like tyrosine kinase 1
mm9_v1_chr1_-_165243777_165243829	0.754919	UCCCUUU	NM_001025570|Prrx1|18933|paired related homeobox 1	NM_011127|Prrx1|18933|paired related homeobox 1	NM_175686|Prrx1|18933|paired related homeobox 1	U03873|Prrx1|18933|paired related homeobox 1	AK084387|Prrx1|18933|paired related homeobox 1	AK029347|Prrx1|18933|paired related homeobox 1
mm9_v1_chr11_+_98724908_98724950	0.754369	UCCCUUU	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr1_+_7079000_7079035	0.754141	UCCCUUU	NM_183028|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr4_+_53727022_53727069	0.750385	UCCCUUU	AK144743|Fktn|246179|fukutin	AK052357|Fktn|246179|fukutin	AK142744|Fktn|246179|fukutin	BC017538|Fktn|246179|fukutin	AJ511807|Fktn|246179|fukutin	AB077384|Fktn|246179|fukutin	AK085931|Fktn|246179|fukutin	NM_139309|Fktn|246179|fukutin
mm9_v1_chr3_-_32884000_32884000	0.746024	UCCCUUU	AK006035|Pex5l|58869|peroxisomal biogenesis factor 5-like	NM_001163517|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr9_-_53475610_53475616	0.74464	UCCCUUU	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr12_-_103943059_103943209	0.741417	UCCCUUU	BC056464|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase	AK038913|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase	NM_172584|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase
mm9_v1_chr14_-_34260323_34260352	0.739407	UCCCUUU	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr8_-_63462080_63462110	0.736223	UCCCUUU	AK159698|Clcn3|12725|chloride channel 3	AK036501|Clcn3|12725|chloride channel 3	NM_007711|Clcn3|12725|chloride channel 3	NM_173873|Clcn3|12725|chloride channel 3	NM_173874|Clcn3|12725|chloride channel 3
mm9_v1_chr17_+_17539635_17539669	0.735663	UCCCUUU	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr1_+_193541845_193542002	0.730992	UCCCUUU	AK133814|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	NM_172266|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr18_-_57134974_57135060	0.72775	UCCCUUU	BC116244|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC116245|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC127172|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK021208|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK053997|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK140255|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	NM_029909|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene
mm9_v1_chr11_-_76391228_76391228	0.722139	UCCCUUU	NM_198894|Abr|109934|active BCR-related gene
mm9_v1_chr10_+_94039007_94039007	0.721331	UCCCUUU	NM_177026|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr6_-_85283412_85283433	0.720154	UCCCUUU	AK036285|Sfxn5|94282|sideroflexin 5	AK043706|Sfxn5|94282|sideroflexin 5	AK082073|Sfxn5|94282|sideroflexin 5	AK038793|Sfxn5|94282|sideroflexin 5	NM_178639|Sfxn5|94282|sideroflexin 5
mm9_v1_chr5_-_35448316_35448420	0.717187	UCCCUUU	BC057979|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC032170|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC046641|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	D00622|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC094324|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	NM_013587|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK171471|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK089250|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166616|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK168421|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AJ639614|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK169132|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK150451|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK152485|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK153323|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166746|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166819|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	S67967|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK145710|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1
mm9_v1_chr1_-_43155380_43155481	0.716369	UCCCUUU	BC138866|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	BC138867|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	BC072608|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	NM_001013025|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	AK051333|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1
mm9_v1_chr18_+_37249789_37249789	0.706701	UCCCUUU	AY013768|Pcdhac1|353236|protocadherin alpha subfamily C, 1	NM_001003671|Pcdhac1|353236|protocadherin alpha subfamily C, 1
mm9_v1_chr9_+_21001148_21001171	0.693262	UCCCUUU	NM_019798|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr18_-_70301202_70301243	0.690396	UCCCUUU	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_-_123174560_123174560	0.689532	UCCCUUU	AK030713|Sox6|20679|SRY-box containing gene 6	NM_001025560|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr2_-_122528199_122528447	0.687208	UCCCUUU	AF003747|Slc30a4|22785|solute carrier family 30 (zinc transporter), member 4	BC117997|Slc30a4|22785|solute carrier family 30 (zinc transporter), member 4	AK134245|Slc30a4|22785|solute carrier family 30 (zinc transporter), member 4	AK166106|Slc30a4|22785|solute carrier family 30 (zinc transporter), member 4	NM_011774|Slc30a4|22785|solute carrier family 30 (zinc transporter), member 4
mm9_v1_chr2_+_174155515_174155590	0.679159	UCCCUUU	BC038067|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK078037|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK159563|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	NM_201616|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr2_-_30270970_30271290	0.674395	UCCCUUU	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chrX_-_141122722_141122821	0.67331	UCCCUUU	AF060107|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	NM_009428|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	AK021052|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5
mm9_v1_chrX_+_160578411_160578593	0.670235	UCCCUUU	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr9_-_42072373_42072382	0.668103	UCCCUUU	NM_172769|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr18_-_15222079_15222098	0.667666	UCCCUUU	NM_001142731|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr3_+_85888355_85888355	0.657889	UCCCUUU	NM_001082414|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr5_+_130555291_130555503	0.656957	UCCCUUU	AK150753|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_001130476|Tpst1|22021|protein-tyrosine sulfotransferase 1	BC012666|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr16_-_35769389_35769480	0.656182	UCCCUUU	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr19_+_16207300_16207320	0.652813	UCCCUUU	AK147393|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide	NM_008139|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr11_+_46049058_46049084	0.651042	UCCCUUU	AK081240|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	NM_177075|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104394|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104395|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene
mm9_v1_chr18_-_15309939_15309954	0.645369	UCCCUUU	AY899808|Kctd1|106931|potassium channel tetramerisation domain containing 1	NM_134112|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr6_+_66846884_66846886	0.640662	UCCCUUU	NM_001177558|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166299|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chr7_-_135605026_135605189	0.632858	UCCCUUU	NM_009383|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	AK132677|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr8_-_8660610_8660772	0.631595	UCCCUUU	U30244|Efnb2|13642|ephrin B2	CT010381|Efnb2|13642|ephrin B2	U16819|Efnb2|13642|ephrin B2	L38847|Efnb2|13642|ephrin B2	NM_010111|Efnb2|13642|ephrin B2
mm9_v1_chr3_+_105255247_105255337	0.630811	UCCCUUU	NM_001039347|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AK147574|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr9_+_64233432_64233531	0.629039	UCCCUUU	NM_001134399|Megf11|214058|multiple EGF-like-domains 11	NM_172522|Megf11|214058|multiple EGF-like-domains 11	AK048840|Megf11|214058|multiple EGF-like-domains 11	AK122555|Megf11|214058|multiple EGF-like-domains 11	AK051642|Megf11|214058|multiple EGF-like-domains 11	BC151157|Megf11|214058|multiple EGF-like-domains 11	BC172024|Megf11|214058|multiple EGF-like-domains 11
mm9_v1_chr9_+_123276054_123276170	0.620367	UCCCUUU	AK037012|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AJ428066|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	NM_153168|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AK053667|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC053916|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC138206|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC145982|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC111892|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC112412|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AK045640|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC080303|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chr5_+_144861227_144861325	0.615229	UCCCUUU	AK158724|Lmtk2|231876|lemur tyrosine kinase 2	NM_001081109|Lmtk2|231876|lemur tyrosine kinase 2
mm9_v1_chr12_-_3309887_3309978	0.611881	UCCCUUU	AK134988|Rab10|19325|RAB10, member RAS oncogene family	AK150791|Rab10|19325|RAB10, member RAS oncogene family	AK153325|Rab10|19325|RAB10, member RAS oncogene family	BC052735|Rab10|19325|RAB10, member RAS oncogene family	BC056374|Rab10|19325|RAB10, member RAS oncogene family	AK160960|Rab10|19325|RAB10, member RAS oncogene family	AK150319|Rab10|19325|RAB10, member RAS oncogene family	AK153315|Rab10|19325|RAB10, member RAS oncogene family	AK159988|Rab10|19325|RAB10, member RAS oncogene family	AK168320|Rab10|19325|RAB10, member RAS oncogene family	AK087964|Rab10|19325|RAB10, member RAS oncogene family	AK159383|Rab10|19325|RAB10, member RAS oncogene family	AK159845|Rab10|19325|RAB10, member RAS oncogene family	AK028320|Rab10|19325|RAB10, member RAS oncogene family	AK166010|Rab10|19325|RAB10, member RAS oncogene family	AK045299|Rab10|19325|RAB10, member RAS oncogene family	AK008725|Rab10|19325|RAB10, member RAS oncogene family	AK146357|Rab10|19325|RAB10, member RAS oncogene family	NM_016676|Rab10|19325|RAB10, member RAS oncogene family
mm9_v1_chr7_-_139346409_139346423	0.609368	UCCCUUU	AF017639|Cpxm2|55987|carboxypeptidase X 2 (M14 family)	AK019509|Cpxm2|55987|carboxypeptidase X 2 (M14 family)	NM_018867|Cpxm2|55987|carboxypeptidase X 2 (M14 family)
mm9_v1_chr11_+_80114320_80114577	0.605852	UCCCUUU	AJ313479|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	NM_139228|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	BC054784|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	BC056969|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)
mm9_v1_chr5_-_23122181_23122418	0.601559	UCCCUUU	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr8_+_124254462_124254503	0.601399	UCCCUUU	AB024449|Jph3|57340|junctophilin 3	NM_020605|Jph3|57340|junctophilin 3	AK046136|Jph3|57340|junctophilin 3	AK082880|Jph3|57340|junctophilin 3	AK045706|Jph3|57340|junctophilin 3	BC103682|Jph3|57340|junctophilin 3	BC104736|Jph3|57340|junctophilin 3	BC105307|Jph3|57340|junctophilin 3
mm9_v1_chr17_-_63230665_63230665	0.597156	UCCCUUU	BC040218|Efna5|13640|ephrin A5	NM_010109|Efna5|13640|ephrin A5	NM_207654|Efna5|13640|ephrin A5
mm9_v1_chr2_-_38920925_38921012	0.596373	UCCCUUU	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr14_-_56279210_56279348	0.592802	UCCCUUU	AF230273|Mdp1|67881|magnesium-dependent phosphatase 1	BC046613|Mdp1|67881|magnesium-dependent phosphatase 1	AK008881|Mdp1|67881|magnesium-dependent phosphatase 1	AK160438|Mdp1|67881|magnesium-dependent phosphatase 1	AK007694|Mdp1|67881|magnesium-dependent phosphatase 1	AK007319|Mdp1|67881|magnesium-dependent phosphatase 1	NM_023397|Mdp1|67881|magnesium-dependent phosphatase 1
mm9_v1_chr6_+_21935907_21936001	0.589677	UCCCUUU	AK087585|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	NM_001081351|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK033229|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK040587|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene
mm9_v1_chr18_+_37164856_37165092	0.581314	UCCCUUU	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr1_+_193542261_193542399	0.579371	UCCCUUU	NM_001134829|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	AK172914|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	BC013667|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr2_+_5058794_5058821	0.578286	UCCCUUU	AK172247|Ccdc3|74186|coiled-coil domain containing 3	BC058616|Ccdc3|74186|coiled-coil domain containing 3	NM_028804|Ccdc3|74186|coiled-coil domain containing 3
mm9_v1_chr3_-_40886957_40886982	0.572993	UCCCUUU	NM_027558|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr4_+_28740280_28740313	0.571761	UCCCUUU	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr3_-_115956312_115956401	0.571722	UCCCUUU	BC029939|Gpr88|64378|G-protein coupled receptor 88	AB042408|Gpr88|64378|G-protein coupled receptor 88	NM_022427|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr13_-_58316960_58317026	0.571708	UCCCUUU	BC080667|Ubqln1|56085|ubiquilin 1	AK165456|Ubqln1|56085|ubiquilin 1	AK172695|Ubqln1|56085|ubiquilin 1	BC026847|Ubqln1|56085|ubiquilin 1	NM_026842|Ubqln1|56085|ubiquilin 1	NM_152234|Ubqln1|56085|ubiquilin 1
mm9_v1_chr4_+_125964037_125964049	0.565934	UCCCUUU	BC065148|Col8a2|329941|collagen, type VIII, alpha 2	NM_199473|Col8a2|329941|collagen, type VIII, alpha 2	BC080317|Col8a2|329941|collagen, type VIII, alpha 2
mm9_v1_chr2_+_118502976_118503018	0.564252	UCCCUUU	NM_001145854|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK028788|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK145601|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr13_+_23931302_23931497	0.563736	UCCCUUU	NM_001164743|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	NM_134069|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK128896|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK143896|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC024459|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC018252|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK165505|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC034179|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC034183|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3
mm9_v1_chr14_+_55502261_55502285	0.557587	UCCCUUU	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr8_+_124114323_124114400	0.55203	UCCCUUU	AF255953|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK132329|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC068180|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK002795|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003558|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK012604|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003106|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003205|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	NM_026160|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK151614|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC028812|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC110308|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC086774|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta
mm9_v1_chr9_+_35018704_35018857	0.54597	UCCCUUU	AK007516|Srpr|67398|signal recognition particle receptor ('docking protein')	AK004967|Srpr|67398|signal recognition particle receptor ('docking protein')	NM_026130|Srpr|67398|signal recognition particle receptor ('docking protein')	AK038017|Srpr|67398|signal recognition particle receptor ('docking protein')	BC021839|Srpr|67398|signal recognition particle receptor ('docking protein')
mm9_v1_chr13_-_14615371_14615494	0.539727	UCCCUUU	AK051569|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK084246|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK086170|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK047678|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_001081348|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK053694|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr11_-_63892874_63892978	0.537146	UCCCUUU	AK213695|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC038046|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC018301|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK149999|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK171661|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK010385|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK154668|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK156865|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK172718|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	NM_178379|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
mm9_v1_chr6_-_92851434_92851434	0.533178	UCCCUUU	NM_175314|Adamts9|101401|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm9_v1_chr5_+_129602591_129602636	0.530439	UCCCUUU	AK153762|Gpr133|243277|G protein-coupled receptor 133	NM_001081342|Gpr133|243277|G protein-coupled receptor 133	AK041279|Gpr133|243277|G protein-coupled receptor 133
mm9_v1_chr17_+_79234855_79234969	0.528159	UCCCUUU	AK148331|Ccdc75|53951|coiled-coil domain containing 75	NM_181649|Ccdc75|53951|coiled-coil domain containing 75	BC092522|Ccdc75|53951|coiled-coil domain containing 75	AK049867|Ccdc75|53951|coiled-coil domain containing 75	BC047998|Ccdc75|53951|coiled-coil domain containing 75	BC138310|Ccdc75|53951|coiled-coil domain containing 75	AK009084|Ccdc75|53951|coiled-coil domain containing 75
mm9_v1_chr10_-_39745065_39745113	0.527438	UCCCUUU	AK089961|AI317395|215929|expressed sequence AI317395	NM_144821|AI317395|215929|expressed sequence AI317395
mm9_v1_chr5_+_69948162_69948312	0.526382	UCCCUUU	AK160956|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	NM_172711|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK032597|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK165012|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK084627|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK053420|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK140534|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	BC057962|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)	AK047411|Guf1|231279|GUF1 GTPase homolog (S. cerevisiae)
mm9_v1_chr6_-_12699189_12699252	0.523489	UCCCUUU	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr15_-_103070227_103070257	0.522966	UCCCUUU	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr10_-_30375572_30375672	0.515342	UCCCUUU	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr7_-_125259660_125259706	0.511227	UCCCUUU	BC051205|Rps15a|267019|ribosomal protein S15A	BC054792|Rps15a|267019|ribosomal protein S15A	NM_170669|Rps15a|267019|ribosomal protein S15A	BC076563|Rps15a|267019|ribosomal protein S15A	AK152932|Rps15a|267019|ribosomal protein S15A	AK008350|Rps15a|267019|ribosomal protein S15A	AK012485|Rps15a|267019|ribosomal protein S15A	AK011514|Rps15a|267019|ribosomal protein S15A	AK012618|Rps15a|267019|ribosomal protein S15A	AK019235|Rps15a|267019|ribosomal protein S15A	AK028135|Rps15a|267019|ribosomal protein S15A	BC086885|Rps15a|267019|ribosomal protein S15A	BC087867|Rps15a|267019|ribosomal protein S15A	AK032522|Rps15a|267019|ribosomal protein S15A	AK010652|Rps15a|267019|ribosomal protein S15A
mm9_v1_chr1_+_137914635_137914732	0.511188	UCCCUUU	NM_001160146|Tmem9|66241|transmembrane protein 9
mm9_v1_chr6_-_30193802_30193802	0.508806	UCCCUUU	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr2_+_118489312_118489451	0.503656	UCCCUUU	BC079572|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	NM_001033254|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	BC150754|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr8_+_107800316_107800347	0.500429	UCCCUUU	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr10_+_94038001_94038001	0.500423	UCCCUUU	BC026867|Tmcc3|319880|transmembrane and coiled coil domains 3	NM_001168684|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr9_-_114843103_114843123	0.49354	UCCCUUU	NM_175380|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr2_-_65405546_65405588	0.492029	UCCCUUU	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr5_+_139064086_139064121	0.491955	UCCCUUU	AK131909|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK131916|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	NM_183025|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK039936|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	BC055299|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene
mm9_v1_chr16_+_38089086_38089192	0.489553	UCCCUUU	AB066114|Gsk3b|56637|glycogen synthase kinase 3 beta	NM_019827|Gsk3b|56637|glycogen synthase kinase 3 beta	BC060743|Gsk3b|56637|glycogen synthase kinase 3 beta
mm9_v1_chr3_-_122939013_122939066	0.487459	UCCCUUU	BC158045|Synpo2|118449|synaptopodin 2	NM_080451|Synpo2|118449|synaptopodin 2
mm9_v1_chr4_-_134108044_134108129	0.487151	UCCCUUU	NM_029100|Sepn1|74777|selenoprotein N, 1
mm9_v1_chrX_-_101176600_101176631	0.487139	UCCCUUU	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr11_+_78075242_78075302	0.48696	UCCCUUU	AK150829|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	NM_001002004|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC080706|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	AK149719|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC075633|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC019798|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr6_-_52163065_52163065	0.484821	UCCCUUU	NM_010452|Hoxa3|15400|homeobox A3
mm9_v1_chr13_-_54150991_54151026	0.480081	UCCCUUU	AK044723|Drd1a|13488|dopamine receptor D1A	NM_010076|Drd1a|13488|dopamine receptor D1A
mm9_v1_chr6_-_126690651_126690691	0.47733	UCCCUUU	NM_013568|Kcna6|16494|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm9_v1_chr6_+_147039596_147039596	0.4677	UCCCUUU	NM_001081237|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr11_+_84693721_84693889	0.467001	UCCCUUU	BC060115|Myo19|66196|myosin XIX	NM_025414|Myo19|66196|myosin XIX	AK080117|Myo19|66196|myosin XIX	AK053237|Myo19|66196|myosin XIX	AK053033|Myo19|66196|myosin XIX
mm9_v1_chr9_+_120213190_120213236	0.465685	UCCCUUU	AK083225|Myrip|245049|myosin VIIA and Rab interacting protein	NM_144557|Myrip|245049|myosin VIIA and Rab interacting protein	AK038988|Myrip|245049|myosin VIIA and Rab interacting protein
mm9_v1_chr2_-_127555628_127555667	0.462403	UCCCUUU	AK078971|Mall|228576|mal, T-cell differentiation protein-like	AK163867|Mall|228576|mal, T-cell differentiation protein-like	NM_145532|Mall|228576|mal, T-cell differentiation protein-like	BC012256|Mall|228576|mal, T-cell differentiation protein-like
mm9_v1_chr17_+_24488985_24489087	0.459263	UCCCUUU	AK166355|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	NM_001039581|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	NM_013855|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC047356|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK089794|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK168428|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK165458|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK089316|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK154698|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AY083616|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr9_+_106724228_106724306	0.45301	UCCCUUU	BC065119|Vprbp|321006|Vpr (HIV-1) binding protein	NM_001015507|Vprbp|321006|Vpr (HIV-1) binding protein
mm9_v1_chr2_+_12845664_12845700	0.452909	UCCCUUU	NM_008961|Pter|19212|phosphotriesterase related
mm9_v1_chr17_+_29227908_29227961	0.448728	UCCCUUU	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr12_-_32398730_32398790	0.446244	UCCCUUU	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr18_+_23912225_23912225	0.444002	UCCCUUU	AK028823|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162941|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr6_-_24118065_24118091	0.443551	UCCCUUU	BC040789|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	BC049981|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK019876|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199365|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199366|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK128899|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_019481|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1
mm9_v1_chr14_+_32898913_32898957	0.439868	UCCCUUU	AK139884|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1	NM_145460|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1
mm9_v1_chr8_+_4493404_4493448	0.438977	UCCCUUU	NM_026058|Lass4|67260|LAG1 homolog, ceramide synthase 4	AK134887|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr7_+_126697853_126697853	0.436782	UCCCUUU	AK140827|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177977|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr12_-_66174913_66174972	0.431901	UCCCUUU	AF110812|Fkbp3|30795|FK506 binding protein 3	AK012346|Fkbp3|30795|FK506 binding protein 3	NM_013902|Fkbp3|30795|FK506 binding protein 3	AF135595|Fkbp3|30795|FK506 binding protein 3	AK168641|Fkbp3|30795|FK506 binding protein 3	BC002122|Fkbp3|30795|FK506 binding protein 3	AK145648|Fkbp3|30795|FK506 binding protein 3	AK150802|Fkbp3|30795|FK506 binding protein 3
mm9_v1_chr8_-_113551636_113551700	0.426956	UCCCUUU	AK147499|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	AK013362|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190800|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_172284|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr3_-_63654912_63654960	0.424505	UCCCUUU	AY691172|Plch1|269437|phospholipase C, eta 1	AY691173|Plch1|269437|phospholipase C, eta 1	AY691174|Plch1|269437|phospholipase C, eta 1	NM_001177732|Plch1|269437|phospholipase C, eta 1	NM_001177733|Plch1|269437|phospholipase C, eta 1	NM_183191|Plch1|269437|phospholipase C, eta 1	BC055005|Plch1|269437|phospholipase C, eta 1
mm9_v1_chr5_-_37087204_37087208	0.417141	UCCCUUU	AK033480|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	NM_001081232|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr16_+_57121795_57121895	0.411843	UCCCUUU	AK145458|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC057096|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK012084|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK083586|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK150429|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	NM_138599|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK161720|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139420|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139421|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK169809|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK122356|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chrX_-_54756877_54756933	0.410267	UCCCUUU	AK138185|Gpr101|245424|G protein-coupled receptor 101	DQ198079|Gpr101|245424|G protein-coupled receptor 101	AK138370|Gpr101|245424|G protein-coupled receptor 101	NM_001033360|Gpr101|245424|G protein-coupled receptor 101
mm9_v1_chr6_+_66846377_66846490	0.410225	UCCCUUU	NM_001177556|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177557|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177559|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177560|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_025278|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK005561|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	BC040685|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK162342|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166035|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK159872|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK148765|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK033422|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chr7_-_135441621_135441663	0.405638	UCCCUUU	AK170611|BC017158|233913|cDNA sequence BC017158	AK149645|BC017158|233913|cDNA sequence BC017158	AK164488|BC017158|233913|cDNA sequence BC017158	AK165287|BC017158|233913|cDNA sequence BC017158	AK148236|BC017158|233913|cDNA sequence BC017158	NM_145590|BC017158|233913|cDNA sequence BC017158
mm9_v1_chr12_-_70994089_70994191	0.40345	UCCCUUU	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr8_-_91568060_91568092	0.403107	UCCCUUU	BC062937|Sall1|58198|sal-like 1 (Drosophila)	NM_021390|Sall1|58198|sal-like 1 (Drosophila)
mm9_v1_chr19_+_53217238_53217304	0.402213	UCCCUUU	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr10_+_74523633_74523640	0.400991	UCCCUUU	NM_001081412|Bcr|110279|breakpoint cluster region
mm9_v1_chr3_+_84668066_84668066	0.399498	UCCCUUU	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chrX_-_96086314_96086363	0.397429	UCCCUUU	AK031419|Ophn1|94190|oligophrenin 1	AK036038|Ophn1|94190|oligophrenin 1	AK043239|Ophn1|94190|oligophrenin 1	AK048153|Ophn1|94190|oligophrenin 1	AK166392|Ophn1|94190|oligophrenin 1	NM_052976|Ophn1|94190|oligophrenin 1	AK039304|Ophn1|94190|oligophrenin 1
mm9_v1_chrX_-_141921588_141921636	0.395442	UCCCUUU	AF461135|Amot|27494|angiomotin	NM_153319|Amot|27494|angiomotin	BC057638|Amot|27494|angiomotin
mm9_v1_chr10_-_29255606_29255672	0.395097	UCCCUUU	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr1_+_40738476_40738556	0.392241	UCCCUUU	BC103685|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC104737|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC105676|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_001033289|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chrX_+_160577257_160577273	0.39054	UCCCUUU	NM_001130513|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr4_+_149656024_149656024	0.388672	UCCCUUU	NM_001085492|Rere|68703|arginine glutamic acid dipeptide (RE) repeats
mm9_v1_chr6_-_71390592_71390638	0.38436	UCCCUUU	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr9_-_110379093_110379197	0.377414	UCCCUUU	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr12_+_87165889_87165903	0.374922	UCCCUUU	NM_001081423|Ttll5|320244|tubulin tyrosine ligase-like family, member 5
mm9_v1_chr7_+_126705221_126705245	0.372314	UCCCUUU	AK057650|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177978|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_146197|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165353|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK143757|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165401|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	BC031140|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr2_+_31428244_31428356	0.37181	UCCCUUU	NM_001033389|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166081|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK137035|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK145377|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166478|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK167671|Fubp3|320267|far upstream element (FUSE) binding protein 3
mm9_v1_chr6_-_59376283_59376287	0.370277	UCCCUUU	AK050148|Gprin3|243385|GPRIN family member 3	NM_183183|Gprin3|243385|GPRIN family member 3	AK173336|Gprin3|243385|GPRIN family member 3
mm9_v1_chr9_+_64949242_64949341	0.3684	UCCCUUU	AB052620|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AB052621|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK082162|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	NM_020043|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK079073|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AF176694|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK143256|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	BC126879|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	BC126880|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4
mm9_v1_chr1_+_59538966_59539075	0.368226	UCCCUUU	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr8_+_97876182_97876236	0.367944	UCCCUUU	BC047278|Mmp15|17388|matrix metallopeptidase 15	NM_008609|Mmp15|17388|matrix metallopeptidase 15
mm9_v1_chr7_-_99785544_99785651	0.367891	UCCCUUU	AK048925|Ankrd42|73845|ankyrin repeat domain 42	AK029888|Ankrd42|73845|ankyrin repeat domain 42	AK133339|Ankrd42|73845|ankyrin repeat domain 42	AK033599|Ankrd42|73845|ankyrin repeat domain 42	BC100433|Ankrd42|73845|ankyrin repeat domain 42	AK029511|Ankrd42|73845|ankyrin repeat domain 42	NM_028665|Ankrd42|73845|ankyrin repeat domain 42
mm9_v1_chr15_-_103045710_103045798	0.366338	UCCCUUU	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr9_+_58100961_58101075	0.356483	UCCCUUU	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr4_+_137818150_137818165	0.354219	UCCCUUU	AB008867|Kif17|16559|kinesin family member 17	NM_001190978|Kif17|16559|kinesin family member 17	NM_010623|Kif17|16559|kinesin family member 17
mm9_v1_chr15_+_102807462_102807462	0.35274	UCCCUUU	BC050838|Hoxc9|15427|homeobox C9	NM_008272|Hoxc9|15427|homeobox C9
mm9_v1_chr11_+_49944855_49944942	0.350922	UCCCUUU	NM_029745|Tbc1d9b|76795|TBC1 domain family, member 9B	BC062928|Tbc1d9b|76795|TBC1 domain family, member 9B	AK166472|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065080|Tbc1d9b|76795|TBC1 domain family, member 9B	AK035457|Tbc1d9b|76795|TBC1 domain family, member 9B	AK147964|Tbc1d9b|76795|TBC1 domain family, member 9B	AK049999|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065130|Tbc1d9b|76795|TBC1 domain family, member 9B	AK172999|Tbc1d9b|76795|TBC1 domain family, member 9B
mm9_v1_chr8_+_82163574_82163602	0.346823	UCCCUUU	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chr19_+_47253309_47253309	0.346482	UCCCUUU	BC099702|Neurl1a|18011|neuralized homolog 1A (Drosophila)	NM_021360|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr3_+_93123668_93123671	0.341078	UCCCUUU	AK041026|Hrnr|68723|hornerin	NM_133698|Hrnr|68723|hornerin
mm9_v1_chr14_+_48283430_48283453	0.338703	UCCCUUU	NM_008477|Ktn1|16709|kinectin 1	L43326|Ktn1|16709|kinectin 1
mm9_v1_chr10_-_5734448_5734544	0.331504	UCCCUUU	EU791538|Esr1|13982|estrogen receptor 1 (alpha)	AK036627|Esr1|13982|estrogen receptor 1 (alpha)	NM_007956|Esr1|13982|estrogen receptor 1 (alpha)	AJ272164|Esr1|13982|estrogen receptor 1 (alpha)	AK039911|Esr1|13982|estrogen receptor 1 (alpha)	AK041525|Esr1|13982|estrogen receptor 1 (alpha)	AK033270|Esr1|13982|estrogen receptor 1 (alpha)
mm9_v1_chr11_-_100389196_100389291	0.330197	UCCCUUU	AK132755|Acly|104112|ATP citrate lyase	BC056378|Acly|104112|ATP citrate lyase	NM_134037|Acly|104112|ATP citrate lyase	AK149660|Acly|104112|ATP citrate lyase
mm9_v1_chr3_+_137880725_137880770	0.329906	UCCCUUU	AK009600|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	NM_009626|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331802|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331803|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr16_+_25683848_25683850	0.312307	UCCCUUU	AK138305|Trp63|22061|transformation related protein 63	NM_001127259|Trp63|22061|transformation related protein 63	NM_001127260|Trp63|22061|transformation related protein 63	NM_001127261|Trp63|22061|transformation related protein 63
mm9_v1_chr9_+_20970150_20970317	0.304541	UCCCUUU	AK153657|Pde4a|18577|phosphodiesterase 4A, cAMP specific	NM_183408|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139405|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139408|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr17_-_27760308_27760448	0.300663	UCCCUUU	AF264064|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	NM_019837|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC046805|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC016534|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr2_-_56976413_56976478	0.300649	UCCCUUU	NM_001139509|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr17_-_23814415_23814446	0.295509	UCCCUUU	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr2_-_170253324_170253344	0.292251	UCCCUUU	BC113166|Bcas1|76960|breast carcinoma amplified sequence 1	BC113957|Bcas1|76960|breast carcinoma amplified sequence 1	AY219233|Bcas1|76960|breast carcinoma amplified sequence 1	AK020254|Bcas1|76960|breast carcinoma amplified sequence 1	NM_001164369|Bcas1|76960|breast carcinoma amplified sequence 1	NM_029815|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr16_+_94792513_94792513	0.291446	UCCCUUU	NM_001113389|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr17_-_24615972_24616025	0.290579	UCCCUUU	AF237676|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK002751|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK083731|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	BC015279|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK048102|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK038515|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK077680|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK088951|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK040100|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	NM_019988|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm9_v1_chr2_-_128513089_128513155	0.288787	UCCCUUU	BC057201|Anapc1|17222|anaphase promoting complex subunit 1	AK149762|Anapc1|17222|anaphase promoting complex subunit 1	AK052404|Anapc1|17222|anaphase promoting complex subunit 1	AK053383|Anapc1|17222|anaphase promoting complex subunit 1	AK090134|Anapc1|17222|anaphase promoting complex subunit 1	AK054305|Anapc1|17222|anaphase promoting complex subunit 1	BC139002|Anapc1|17222|anaphase promoting complex subunit 1	BC145492|Anapc1|17222|anaphase promoting complex subunit 1	AK164804|Anapc1|17222|anaphase promoting complex subunit 1	X80169|Anapc1|17222|anaphase promoting complex subunit 1	AK077847|Anapc1|17222|anaphase promoting complex subunit 1	NM_008569|Anapc1|17222|anaphase promoting complex subunit 1
mm9_v1_chr19_+_53214934_53215104	0.288403	UCCCUUU	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr17_-_45686604_45686625	0.285947	UCCCUUU	BC079879|Tmem151b|210573|transmembrane protein 151B	NM_001013749|Tmem151b|210573|transmembrane protein 151B
mm9_v1_chr6_+_106719113_106719221	0.283388	UCCCUUU	AK135791|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK010662|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AB063106|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK152739|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	BC031764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	NM_027296|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK011764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK166804|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK139764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1
mm9_v1_chr10_-_9394979_9395005	0.279274	UCCCUUU	AK132444|Samd5|320825|sterile alpha motif domain containing 5	AK087498|Samd5|320825|sterile alpha motif domain containing 5	NM_177271|Samd5|320825|sterile alpha motif domain containing 5
mm9_v1_chr11_+_69660115_69660155	0.27918	UCCCUUU	NM_023564|Plscr3|70310|phospholipid scramblase 3	AK011716|Plscr3|70310|phospholipid scramblase 3	AK166288|Plscr3|70310|phospholipid scramblase 3	AK172635|Plscr3|70310|phospholipid scramblase 3
mm9_v1_chr5_+_30431701_30431755	0.277082	UCCCUUU	NM_001167879|Fam59b|242915|family with sequence similarity 59, member B
mm9_v1_chr6_-_83725776_83725818	0.276658	UCCCUUU	AK157834|Tex261|21766|testis expressed gene 261	NM_009357|Tex261|21766|testis expressed gene 261
mm9_v1_chr6_+_30351902_30351953	0.276051	UCCCUUU	AK172923|Klhdc10|76788|kelch domain containing 10	BC060132|Klhdc10|76788|kelch domain containing 10	NM_029742|Klhdc10|76788|kelch domain containing 10	AK039732|Klhdc10|76788|kelch domain containing 10	AK053834|Klhdc10|76788|kelch domain containing 10	AK085130|Klhdc10|76788|kelch domain containing 10
mm9_v1_chr7_-_123182257_123182257	0.275354	UCCCUUU	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr2_+_107130745_107130810	0.27418	UCCCUUU	NM_021275|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4	AK036112|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4
mm9_v1_chr2_+_119798434_119798434	0.273169	UCCCUUU	BC070449|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1	NM_011941|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1
mm9_v1_chr7_+_119822831_119822885	0.272276	UCCCUUU	S74227|Tead1|21676|TEA domain family member 1	AK140307|Tead1|21676|TEA domain family member 1	NM_001166584|Tead1|21676|TEA domain family member 1	NM_009346|Tead1|21676|TEA domain family member 1	AK148375|Tead1|21676|TEA domain family member 1
mm9_v1_chr3_-_92377636_92377658	0.271328	UCCCUUU	BC152326|Ivl|16447|involucrin	NM_008412|Ivl|16447|involucrin
mm9_v1_chr1_-_138850206_138850206	0.269681	UCCCUUU	DQ133942|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_001159769|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr10_+_17516024_17516131	0.269274	UCCCUUU	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr18_+_61085283_61085301	0.263768	UCCCUUU	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr19_+_44637331_44637363	0.260077	UCCCUUU	AK154774|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	BC130013|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	NM_176958|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK084960|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK043636|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK141867|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor
mm9_v1_chr10_+_93977597_93977699	0.259904	UCCCUUU	NM_172051|Tmcc3|319880|transmembrane and coiled coil domains 3	AK132545|Tmcc3|319880|transmembrane and coiled coil domains 3	BC095951|Tmcc3|319880|transmembrane and coiled coil domains 3	AK083129|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr2_-_181327165_181327210	0.258239	UCCCUUU	AK129308|Znf512b|269401|zinc finger protein 512B	NM_001164597|Znf512b|269401|zinc finger protein 512B
mm9_v1_chr11_-_120434204_120434302	0.253641	UCCCUUU	AK150002|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	J05185|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	NM_011032|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr5_-_115608153_115608220	0.252609	UCCCUUU	AK031525|Mlec|109154|malectin	AK075940|Mlec|109154|malectin	NM_175403|Mlec|109154|malectin
mm9_v1_chr6_-_118147735_118147761	0.252608	UCCCUUU	BC059012|Ret|19713|ret proto-oncogene	NM_001080780|Ret|19713|ret proto-oncogene	NM_009050|Ret|19713|ret proto-oncogene
mm9_v1_chr5_+_65361309_65361366	0.248667	UCCCUUU	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr2_-_56967331_56967448	0.245915	UCCCUUU	S53744|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2	AK158607|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2	NM_013613|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr11_+_119352933_119353046	0.245267	UCCCUUU	NM_177394|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK170595|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK172181|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	BC056486|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK042626|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr8_-_113555584_113555650	0.244682	UCCCUUU	AK033235|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190786|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr6_-_86683330_86683393	0.241917	UCCCUUU	BC054767|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK146964|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK004716|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK155238|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	NM_011818|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)
mm9_v1_chr9_-_113617224_113617390	0.241821	UCCCUUU	AJ005073|Pdcd6ip|18571|programmed cell death 6 interacting protein	AJ005074|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC051123|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC026823|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK167574|Pdcd6ip|18571|programmed cell death 6 interacting protein	AF119955|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK029827|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK129340|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK147736|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK031256|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK033943|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK145893|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK169704|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164677|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164678|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_011052|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr19_+_43514902_43514932	0.241604	UCCCUUU	NM_031396|Cnnm1|83674|cyclin M1
mm9_v1_chr11_-_97883924_97884006	0.238725	UCCCUUU	BC077713|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	AK155193|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_001159319|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_031173|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_145121|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	AF322905|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit
mm9_v1_chr3_-_85691167_85691439	0.238072	UCCCUUU	BC119772|Glt28d2|320302|glycosyltransferase 28 domain containing 2	BC121823|Glt28d2|320302|glycosyltransferase 28 domain containing 2	AK029059|Glt28d2|320302|glycosyltransferase 28 domain containing 2	AK030588|Glt28d2|320302|glycosyltransferase 28 domain containing 2	AK032049|Glt28d2|320302|glycosyltransferase 28 domain containing 2	NM_177130|Glt28d2|320302|glycosyltransferase 28 domain containing 2
mm9_v1_chr10_-_66747843_66748097	0.236694	UCCCUUU	AK181810|Nrbf2|641340|nuclear receptor binding factor 2	AK189272|Nrbf2|641340|nuclear receptor binding factor 2	AK205591|Nrbf2|641340|nuclear receptor binding factor 2	AK004200|Nrbf2|641340|nuclear receptor binding factor 2	BC019448|Nrbf2|641340|nuclear receptor binding factor 2	NM_001036293|Nrbf2|641340|nuclear receptor binding factor 2	AK002810|Nrbf2|641340|nuclear receptor binding factor 2
mm9_v1_chr7_+_53128141_53128380	0.235709	UCCCUUU	AK078785|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AK013118|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AJ278132|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	NM_133950|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	BC011370|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AY027435|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm9_v1_chr10_-_4752710_4752812	0.233282	UCCCUUU	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr7_+_119902897_119902956	0.231237	UCCCUUU	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr2_+_158235580_158235588	0.22841	UCCCUUU	NM_177658|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chr11_+_58144207_58144291	0.226275	UCCCUUU	AK156171|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK159202|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK172333|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_001161338|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_024480|Sh3bp5l|79566|SH3 binding domain protein 5 like	BC094418|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK166491|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK144928|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK086088|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK150129|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK167203|Sh3bp5l|79566|SH3 binding domain protein 5 like
mm9_v1_chr1_+_187028043_187028086	0.217035	UCCCUUU	NM_001163754|Rab3gap2|98732|RAB3 GTPase activating protein subunit 2	AK157509|Rab3gap2|98732|RAB3 GTPase activating protein subunit 2
mm9_v1_chr15_-_99650502_99650572	0.210639	UCCCUUU	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr5_+_122608248_122608342	0.205083	UCCCUUU	AK147131|Ppp1cc|19047|protein phosphatase 1, catalytic subunit, gamma isoform	NM_013636|Ppp1cc|19047|protein phosphatase 1, catalytic subunit, gamma isoform	BC021646|Ppp1cc|19047|protein phosphatase 1, catalytic subunit, gamma isoform	AK152422|Ppp1cc|19047|protein phosphatase 1, catalytic subunit, gamma isoform	AK169336|Ppp1cc|19047|protein phosphatase 1, catalytic subunit, gamma isoform
mm9_v1_chr4_-_153400020_153400152	0.204006	UCCCUUU	AK158109|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	BC055944|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK165247|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK167398|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK028394|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK012228|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	NM_001163721|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	NM_001163722|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene
mm9_v1_chr1_+_108757751_108757756	0.201584	UCCCUUU	AK136532|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5	BC005434|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5	NM_009257|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5
mm9_v1_chr15_-_75839859_75839950	0.192302	UCCCUUU	AK030392|Fam83h|105732|family with sequence similarity 83, member H	NM_001168253|Fam83h|105732|family with sequence similarity 83, member H
mm9_v1_chr14_-_79647102_79647173	0.189418	UCCCUUU	AK139686|Zfp957|105590|zinc finger protein 957	NM_001033215|Zfp957|105590|zinc finger protein 957
mm9_v1_chr9_+_32180002_32180181	0.189314	UCCCUUU	NM_019659|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AK085262|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AF012834|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1
mm9_v1_chr15_+_78939343_78939412	0.184449	UCCCUUU	AK147646|Micall1|27008|microtubule associated monoxygenase, calponin and LIM domain containing -like 1	AK147587|Micall1|27008|microtubule associated monoxygenase, calponin and LIM domain containing -like 1	NM_177461|Micall1|27008|microtubule associated monoxygenase, calponin and LIM domain containing -like 1
mm9_v1_chr1_-_137481914_137481937	0.183974	UCCCUUU	NM_173437|Nav1|215690|neuron navigator 1
mm9_v1_chr7_+_16715637_16715696	0.183753	UCCCUUU	BC058704|Slc8a2|110891|solute carrier family 8 (sodium/calcium exchanger), member 2	NM_148946|Slc8a2|110891|solute carrier family 8 (sodium/calcium exchanger), member 2	BC080277|Slc8a2|110891|solute carrier family 8 (sodium/calcium exchanger), member 2
mm9_v1_chr17_-_46968361_46968361	0.181097	UCCCUUU	BC151032|BC032203|210982|cDNA sequence BC032203	BC151054|BC032203|210982|cDNA sequence BC032203	NM_001100452|BC032203|210982|cDNA sequence BC032203
mm9_v1_chr2_+_84680479_84680580	0.177204	UCCCUUU	NM_024497|Slc43a1|72401|solute carrier family 43, member 1	BC053747|Slc43a1|72401|solute carrier family 43, member 1
mm9_v1_chr11_-_69672218_69672235	0.175759	UCCCUUU	BC029623|Tnk1|83813|tyrosine kinase, non-receptor, 1	AF307746|Tnk1|83813|tyrosine kinase, non-receptor, 1	AK076220|Tnk1|83813|tyrosine kinase, non-receptor, 1	AK167292|Tnk1|83813|tyrosine kinase, non-receptor, 1	NM_031880|Tnk1|83813|tyrosine kinase, non-receptor, 1
mm9_v1_chr6_+_115551903_115551958	0.174761	UCCCUUU	BC025547|Mkrn2|67027|makorin, ring finger protein, 2	AK009515|Mkrn2|67027|makorin, ring finger protein, 2	AK077926|Mkrn2|67027|makorin, ring finger protein, 2	NM_023290|Mkrn2|67027|makorin, ring finger protein, 2
mm9_v1_chr3_-_138738152_138738164	0.173209	UCCCUUU	AK158465|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_001040690|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_145544|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK172052|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr19_+_45080961_45081073	0.17306	UCCCUUU	BC071195|Peo1|226153|progressive external ophthalmoplegia 1 (human)	NM_153796|Peo1|226153|progressive external ophthalmoplegia 1 (human)
mm9_v1_chr5_+_137443701_137443749	0.172463	UCCCUUU	AK008683|Cldn15|60363|claudin 15	NM_021719|Cldn15|60363|claudin 15	BC023428|Cldn15|60363|claudin 15
mm9_v1_chr2_-_162486882_162486956	0.16858	UCCCUUU	AF244125|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	NM_021464|Ptprt|19281|protein tyrosine phosphatase, receptor type, T
mm9_v1_chr8_+_27229839_27230052	0.167169	UCCCUUU	AK162554|Rnf170|77733|ring finger protein 170	AK044579|Rnf170|77733|ring finger protein 170	AK153658|Rnf170|77733|ring finger protein 170	BC114210|Rnf170|77733|ring finger protein 170	NM_029965|Rnf170|77733|ring finger protein 170	AK042063|Rnf170|77733|ring finger protein 170	AK152760|Rnf170|77733|ring finger protein 170	AK020104|Rnf170|77733|ring finger protein 170	AK036051|Rnf170|77733|ring finger protein 170	BC138930|Rnf170|77733|ring finger protein 170	BC145718|Rnf170|77733|ring finger protein 170	BC031383|Rnf170|77733|ring finger protein 170	AK080591|Rnf170|77733|ring finger protein 170
mm9_v1_chr7_+_109054350_109054514	0.15951	UCCCUUU	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr10_+_7400978_7401034	0.1589	UCCCUUU	AK038612|Lats1|16798|large tumor suppressor	NM_010690|Lats1|16798|large tumor suppressor	BC158123|Lats1|16798|large tumor suppressor
mm9_v1_chr13_+_37980739_37980739	0.158688	UCCCUUU	NM_001177869|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr9_+_118620809_118620817	0.158114	UCCCUUU	NM_001113514|Itga9|104099|integrin alpha 9	AK139690|Itga9|104099|integrin alpha 9
mm9_v1_chr2_-_120389559_120389604	0.154597	UCCCUUU	AK147887|Zfp106|20402|zinc finger protein 106	AK089359|Zfp106|20402|zinc finger protein 106	AK155019|Zfp106|20402|zinc finger protein 106	NM_011743|Zfp106|20402|zinc finger protein 106
mm9_v1_chr3_+_28162135_28162218	0.153997	UCCCUUU	BC050866|Tnik|665113|TRAF2 and NCK interacting kinase	BC050868|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163007|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163008|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163009|Tnik|665113|TRAF2 and NCK interacting kinase	NM_026910|Tnik|665113|TRAF2 and NCK interacting kinase	AK041777|Tnik|665113|TRAF2 and NCK interacting kinase	AK133568|Tnik|665113|TRAF2 and NCK interacting kinase	AK039113|Tnik|665113|TRAF2 and NCK interacting kinase
mm9_v1_chr6_-_94233855_94233910	0.15175	UCCCUUU	AK046635|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC095943|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001029850|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_010367|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK147358|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr1_+_181891219_181891219	0.150983	UCCCUUU	BC158017|Cdc42bpa|226751|CDC42 binding protein kinase alpha	BC158095|Cdc42bpa|226751|CDC42 binding protein kinase alpha	NM_001033285|Cdc42bpa|226751|CDC42 binding protein kinase alpha
mm9_v1_chr4_-_53172748_53172872	0.149313	UCCCUUU	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr1_-_120950111_120950195	0.127576	UCCCUUU	BC085190|Gli2|14633|GLI-Kruppel family member GLI2	BC082604|Gli2|14633|GLI-Kruppel family member GLI2	NM_001081125|Gli2|14633|GLI-Kruppel family member GLI2
mm9_v1_chr5_-_34125322_34125413	0.126607	UCCCUUU	BC023862|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AF061026|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC061690|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	NM_019694|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC046326|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC055865|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AB041582|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC061115|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AK133849|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1
mm9_v1_chr1_+_133724553_133724859	0.122397	UCCCUUU	BC096596|Slc41a1|98396|solute carrier family 41, member 1	AK089802|Slc41a1|98396|solute carrier family 41, member 1	NM_173865|Slc41a1|98396|solute carrier family 41, member 1	AK045861|Slc41a1|98396|solute carrier family 41, member 1	AK154819|Slc41a1|98396|solute carrier family 41, member 1	BC042724|Slc41a1|98396|solute carrier family 41, member 1	BC116280|Slc41a1|98396|solute carrier family 41, member 1	BC116281|Slc41a1|98396|solute carrier family 41, member 1	AK039371|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr10_-_9620837_9620892	0.120533	UCCCUUU	NM_001081344|Stxbp5|78808|syntaxin binding protein 5 (tomosyn)
mm9_v1_chr5_-_65826969_65827179	0.117618	UCCCUUU	AK167560|Ugdh|22235|UDP-glucose dehydrogenase	BC006749|Ugdh|22235|UDP-glucose dehydrogenase	NM_009466|Ugdh|22235|UDP-glucose dehydrogenase	AK169208|Ugdh|22235|UDP-glucose dehydrogenase	AK144673|Ugdh|22235|UDP-glucose dehydrogenase
mm9_v1_chr4_+_128867038_128867085	0.109329	UCCCUUU	NM_134151|Yars|107271|tyrosyl-tRNA synthetase
mm9_v1_chr16_-_3872273_3872373	0.105291	UCCCUUU	AK016727|Zfp597|71063|zinc finger protein 597	NM_001033159|Zfp597|71063|zinc finger protein 597
mm9_v1_chr4_+_108292534_108292631	0.103908	UCCCUUU	AK146601|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK043839|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	NM_177045|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK148162|Cc2d1b|319965|coiled-coil and C2 domain containing 1B
mm9_v1_chr13_-_38085986_38086062	0.102849	UCCCUUU	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr2_-_120434984_120435243	0.102528	UCCCUUU	AK003592|Lrrc57|66606|leucine rich repeat containing 57	AK169249|Lrrc57|66606|leucine rich repeat containing 57	BC034894|Lrrc57|66606|leucine rich repeat containing 57	AK003037|Lrrc57|66606|leucine rich repeat containing 57	NM_025657|Lrrc57|66606|leucine rich repeat containing 57	AK012637|Lrrc57|66606|leucine rich repeat containing 57	AK033084|Lrrc57|66606|leucine rich repeat containing 57	AK134971|Lrrc57|66606|leucine rich repeat containing 57	NM_001159612|Lrrc57|66606|leucine rich repeat containing 57	AK015684|Lrrc57|66606|leucine rich repeat containing 57	AK019566|Lrrc57|66606|leucine rich repeat containing 57	NM_001159609|Lrrc57|66606|leucine rich repeat containing 57	NM_001159610|Lrrc57|66606|leucine rich repeat containing 57
mm9_v1_chr3_+_89534639_89534732	0.102318	UCCCUUU	NM_001146296|Adar|56417|adenosine deaminase, RNA-specific	NM_019655|Adar|56417|adenosine deaminase, RNA-specific	AK089451|Adar|56417|adenosine deaminase, RNA-specific	BC042505|Adar|56417|adenosine deaminase, RNA-specific	AF052506|Adar|56417|adenosine deaminase, RNA-specific	AF291050|Adar|56417|adenosine deaminase, RNA-specific	AF291875|Adar|56417|adenosine deaminase, RNA-specific	AF291876|Adar|56417|adenosine deaminase, RNA-specific	AF291877|Adar|56417|adenosine deaminase, RNA-specific	CT010323|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr1_-_183950050_183950110	0.101925	UCCCUUU	NM_001083120|Enah|13800|enabled homolog (Drosophila)	NM_001083121|Enah|13800|enabled homolog (Drosophila)	NM_008680|Enah|13800|enabled homolog (Drosophila)	NM_010135|Enah|13800|enabled homolog (Drosophila)
mm9_v1_chr5_-_138705172_138705284	0.101698	UCCCUUU	AK138960|BC037034|231807|cDNA sequence BC037034	AK046882|BC037034|231807|cDNA sequence BC037034	NM_153161|BC037034|231807|cDNA sequence BC037034
mm9_v1_chr6_+_143115732_143115821	0.101635	UCCCUUU	AK051039|Etnk1|75320|ethanolamine kinase 1	AK044502|Etnk1|75320|ethanolamine kinase 1	NM_029250|Etnk1|75320|ethanolamine kinase 1	AK016135|Etnk1|75320|ethanolamine kinase 1	AK031560|Etnk1|75320|ethanolamine kinase 1	AK033268|Etnk1|75320|ethanolamine kinase 1	AK164928|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr12_-_109241423_109241623	0.0962289	UCCCUUU	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr4_-_63156984_63157036	0.0960952	UCCCUUU	AY739114|Whrn|73750|whirlin	AY739115|Whrn|73750|whirlin	AY739116|Whrn|73750|whirlin	AY739117|Whrn|73750|whirlin	AY739118|Whrn|73750|whirlin	AY739119|Whrn|73750|whirlin	AY739120|Whrn|73750|whirlin	NM_001008791|Whrn|73750|whirlin	NM_001008792|Whrn|73750|whirlin	NM_001008793|Whrn|73750|whirlin	NM_001008794|Whrn|73750|whirlin	NM_001008795|Whrn|73750|whirlin	NM_001008796|Whrn|73750|whirlin	NM_028640|Whrn|73750|whirlin	AK157955|Whrn|73750|whirlin
mm9_v1_chrX_+_70656434_70656441	0.095349	UCCCUUU	U47104|Zfp92|22754|zinc finger protein 92	AK141522|Zfp92|22754|zinc finger protein 92	NM_009566|Zfp92|22754|zinc finger protein 92
mm9_v1_chr11_+_119352660_119352688	0.0939193	UCCCUUU	AK084233|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	NM_001164636|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK084548|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr3_+_79689851_79689888	0.0908841	UCCCUUU	NM_133187|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr3_-_65196395_65196552	0.0829179	UCCCUUU	AK192841|Ssr3|67437|signal sequence receptor, gamma	AK194871|Ssr3|67437|signal sequence receptor, gamma	AK199053|Ssr3|67437|signal sequence receptor, gamma	AK206034|Ssr3|67437|signal sequence receptor, gamma	BC020335|Ssr3|67437|signal sequence receptor, gamma	CT010172|Ssr3|67437|signal sequence receptor, gamma	AK150255|Ssr3|67437|signal sequence receptor, gamma	AK002818|Ssr3|67437|signal sequence receptor, gamma	AK029353|Ssr3|67437|signal sequence receptor, gamma	NM_026155|Ssr3|67437|signal sequence receptor, gamma	AK088555|Ssr3|67437|signal sequence receptor, gamma	BC011111|Ssr3|67437|signal sequence receptor, gamma	AK076235|Ssr3|67437|signal sequence receptor, gamma
mm9_v1_chr8_+_114062242_114062242	0.0784582	UCCCUUU	NM_001168623|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr6_-_38204008_38204008	0.0756725	UCCCUUU	NM_194061|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr16_-_17201556_17201596	0.0710776	UCCCUUU	AK165620|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC106149|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC093503|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK167847|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC049075|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AJ130961|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	NM_009456|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	X97042|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK152522|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK007265|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3
mm9_v1_chr3_+_84619399_84619498	0.0703774	UCCCUUU	BC085184|Fbxw7|50754|F-box and WD-40 domain protein 7	BC060620|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177773|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr6_+_113027481_113027632	0.0699125	UCCCUUU	AK149622|Setd5|72895|SET domain containing 5	AK150198|Setd5|72895|SET domain containing 5	AK167431|Setd5|72895|SET domain containing 5	BC056502|Setd5|72895|SET domain containing 5	BC056206|Setd5|72895|SET domain containing 5	AK122551|Setd5|72895|SET domain containing 5	NM_028385|Setd5|72895|SET domain containing 5
mm9_v1_chr2_+_33071451_33071671	0.0698343	UCCCUUU	AK155464|Angptl2|26360|angiopoietin-like 2	NM_011923|Angptl2|26360|angiopoietin-like 2	AK037265|Angptl2|26360|angiopoietin-like 2	AK011976|Angptl2|26360|angiopoietin-like 2	BC138609|Angptl2|26360|angiopoietin-like 2	BC138610|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr11_+_62633754_62633754	0.0698324	UCCCUUU	NM_053169|Trim16|94092|tripartite motif-containing 16
mm9_v1_chr5_-_23897960_23897960	0.0645479	UCCCUUU	AY495541|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515313|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_001002897|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)
mm9_v1_chr7_+_63097396_63097595	0.0601684	UCCCUUU	AK044651|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	NM_001164661|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	NM_001164662|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	NM_011370|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	BC052713|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr13_+_84361874_84361961	0.059504	UCCCUUU	NM_175187|Tmem161b|72745|transmembrane protein 161B	AK035319|Tmem161b|72745|transmembrane protein 161B	BC060067|Tmem161b|72745|transmembrane protein 161B	AK013305|Tmem161b|72745|transmembrane protein 161B	AK088393|Tmem161b|72745|transmembrane protein 161B	AK051974|Tmem161b|72745|transmembrane protein 161B	BC051663|Tmem161b|72745|transmembrane protein 161B
mm9_v1_chr16_+_32277544_32277611	0.0594551	UCCCUUU	AK053769|Rnf168|70238|ring finger protein 168	NM_027355|Rnf168|70238|ring finger protein 168	BC046815|Rnf168|70238|ring finger protein 168	AK013946|Rnf168|70238|ring finger protein 168
mm9_v1_chr11_+_67779978_67779989	0.0482009	UCCCUUU	AK035105|Stx8|55943|syntaxin 8	BC048167|Stx8|55943|syntaxin 8	NM_018768|Stx8|55943|syntaxin 8	BC038186|Stx8|55943|syntaxin 8	AF093064|Stx8|55943|syntaxin 8	AB040054|Stx8|55943|syntaxin 8
mm9_v1_chr7_+_48888900_48888933	0.0425332	UCCCUUU	AK082981|Zfp788|67607|zinc finger protein 788	NM_023363|Zfp788|67607|zinc finger protein 788	AK020228|Zfp788|67607|zinc finger protein 788	AK036346|Zfp788|67607|zinc finger protein 788
mm9_v1_chr1_-_74634579_74634609	0.0425113	UCCCUUU	AB093218|Zfp142|77264|zinc finger protein 142	AK020384|Zfp142|77264|zinc finger protein 142	AK132550|Zfp142|77264|zinc finger protein 142	NM_029888|Zfp142|77264|zinc finger protein 142	AK153768|Zfp142|77264|zinc finger protein 142
mm9_v1_chr18_+_42213320_42213410	0.0396486	UCCCUUU	AK033601|Sh3rf2|269016|SH3 domain containing ring finger 2	AK029168|Sh3rf2|269016|SH3 domain containing ring finger 2	NM_001146299|Sh3rf2|269016|SH3 domain containing ring finger 2	NM_172966|Sh3rf2|269016|SH3 domain containing ring finger 2	BC137955|Sh3rf2|269016|SH3 domain containing ring finger 2	BC145060|Sh3rf2|269016|SH3 domain containing ring finger 2
mm9_v1_chr9_-_21397188_21397310	0.0365919	UCCCUUU	BC002282|Yipf2|74766|Yip1 domain family, member 2	NM_138303|Yipf2|74766|Yip1 domain family, member 2	BC003289|Yipf2|74766|Yip1 domain family, member 2	AK033705|Yipf2|74766|Yip1 domain family, member 2	AK133631|Yipf2|74766|Yip1 domain family, member 2	AK004959|Yipf2|74766|Yip1 domain family, member 2
mm9_v1_chr19_+_46206383_46206393	0.0279524	UCCCUUU	NM_007703|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3	U97107|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3	BC016468|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
mm9_v1_chr19_+_25746900_25746909	0.0257357	UCCCUUU	AF539811|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK044891|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	NM_145831|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK140347|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK140337|Dmrt2|226049|doublesex and mab-3 related transcription factor 2
mm9_v1_chr5_-_124199380_124199422	0.0250557	UCCCUUU	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr19_-_34821529_34821600	0.0225337	UCCCUUU	AK028284|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	AK029076|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	NM_172838|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm9_v1_chr4_-_35173039_35173134	0.0223081	UCCCUUU	AK167354|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK014175|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK154817|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	NM_001081343|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene
mm9_v1_chrX_+_90920450_90920749	0.0210292	UCCCUUU	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr6_-_72738935_72738949	0.020473	UCCCUUU	BC128305|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	BC128306|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	AJ223069|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	NM_001079822|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	NM_009332|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)
mm9_v1_chr9_+_91263809_91263809	0.0196791	UCCCUUU	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr5_+_22252006_22252042	0.018415	UCCCUUU	NM_001081231|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	NM_029990|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK033906|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK020916|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3
mm9_v1_chr11_+_94491055_94491166	0.0179628	UCCCUUU	AK159374|Lrrc59|98238|leucine rich repeat containing 59	AK159552|Lrrc59|98238|leucine rich repeat containing 59	AK166576|Lrrc59|98238|leucine rich repeat containing 59	AK053450|Lrrc59|98238|leucine rich repeat containing 59	BC006877|Lrrc59|98238|leucine rich repeat containing 59	NM_133807|Lrrc59|98238|leucine rich repeat containing 59	AK169390|Lrrc59|98238|leucine rich repeat containing 59	BC066172|Lrrc59|98238|leucine rich repeat containing 59	AK167604|Lrrc59|98238|leucine rich repeat containing 59	AK169250|Lrrc59|98238|leucine rich repeat containing 59
mm9_v1_chr14_+_65977510_65977519	0.0167615	UCCCUUU	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr7_+_140829357_140829384	0.00919062	UCCCUUU	NM_178115|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene	AK052387|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene
mm9_v1_chr3_-_108714578_108714667	0.00788575	UCCCUUU	BC050900|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC052077|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	NM_025845|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK015938|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK040788|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK159267|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK018126|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr16_+_24721940_24721951	0.00681903	UCCCUUU	AK029567|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145954|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK076989|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr17_+_35213886_35214099	0.00553802	UCCCUUU	NM_027366|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AK009303|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC132420|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC138777|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315550|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315551|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E
