mm9_v1_chr3_-_55987612_55987634	24.6771	UGAAAUG	NM_030595|Nbea|26422|neurobeachin	Y18276|Nbea|26422|neurobeachin
mm9_v1_chr9_+_32031833_32031859	24.3219	UGAAAUG	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr6_-_92517359_92517359	21.5533	UGAAAUG	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr6_-_92656148_92656177	21.2698	UGAAAUG	BC099897|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001081146|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr1_-_159342713_159342735	20.9243	UGAAAUG	AK039584|Rasal2|226525|RAS protein activator like 2	NM_177644|Rasal2|226525|RAS protein activator like 2
mm9_v1_chr6_-_92484838_92484854	20.4886	UGAAAUG	AK147576|Prickle2|243548|prickle homolog 2 (Drosophila)	AK147628|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134459|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr6_-_92431385_92431385	19.2188	UGAAAUG	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr3_-_80717517_80717574	18.4346	UGAAAUG	BC027094|Glrb|14658|glycine receptor, beta subunit	BC037605|Glrb|14658|glycine receptor, beta subunit	NM_010298|Glrb|14658|glycine receptor, beta subunit
mm9_v1_chr7_+_64845887_64845914	16.9908	UGAAAUG	AK083107|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_001038701|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr3_-_31209216_31209240	16.6646	UGAAAUG	AK173217|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	BC061928|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	AK044448|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	NM_172861|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm9_v1_chr4_-_86876328_86876443	16.5048	UGAAAUG	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr18_+_65183180_65183324	16.4579	UGAAAUG	NM_031881|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr5_-_38550627_38550759	15.9132	UGAAAUG	AF035683|Nsg1|18196|neuron specific gene family member 1	AK144503|Nsg1|18196|neuron specific gene family member 1	BC008272|Nsg1|18196|neuron specific gene family member 1	AK078054|Nsg1|18196|neuron specific gene family member 1	AK148941|Nsg1|18196|neuron specific gene family member 1	AX775765|Nsg1|18196|neuron specific gene family member 1	NM_010942|Nsg1|18196|neuron specific gene family member 1
mm9_v1_chr9_+_31923720_31923720	15.6649	UGAAAUG	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr12_+_39506844_39506916	15.6132	UGAAAUG	NM_007960|Etv1|14009|ets variant gene 1	L10426|Etv1|14009|ets variant gene 1	AK144713|Etv1|14009|ets variant gene 1	BC005645|Etv1|14009|ets variant gene 1
mm9_v1_chr1_+_154802198_154802230	15.4274	UGAAAUG	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr13_+_48356795_48356817	15.409	UGAAAUG	NM_031166|Id4|15904|inhibitor of DNA binding 4	X75018|Id4|15904|inhibitor of DNA binding 4	BC145367|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr2_+_158436493_158436936	15.2346	UGAAAUG	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr12_-_11443284_11443537	14.8153	UGAAAUG	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr2_-_144353133_144353142	14.7939	UGAAAUG	AK032182|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene	NM_172859|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene
mm9_v1_chr16_+_13986691_13986753	13.5962	UGAAAUG	AK049997|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK076136|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK139470|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK136859|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	NM_144518|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK019307|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	BC022741|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK035868|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene
mm9_v1_chr19_+_47089168_47089192	13.3455	UGAAAUG	BC018383|Ina|226180|internexin neuronal intermediate filament protein, alpha	NM_146100|Ina|226180|internexin neuronal intermediate filament protein, alpha	L36390|Ina|226180|internexin neuronal intermediate filament protein, alpha
mm9_v1_chrX_-_130223380_130223542	12.488	UGAAAUG	AK046726|Pcdh19|279653|protocadherin 19	NM_001105245|Pcdh19|279653|protocadherin 19	NM_001105246|Pcdh19|279653|protocadherin 19
mm9_v1_chr5_+_14514906_14514924	12.2475	UGAAAUG	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr2_+_143371807_143372226	12.0504	UGAAAUG	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr10_+_106708886_106708980	11.9769	UGAAAUG	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr10_+_4424140_4424212	11.8033	UGAAAUG	AK030492|Rgs17|56533|regulator of G-protein signaling 17	NM_001161822|Rgs17|56533|regulator of G-protein signaling 17	NM_019958|Rgs17|56533|regulator of G-protein signaling 17	AK018279|Rgs17|56533|regulator of G-protein signaling 17	AK045770|Rgs17|56533|regulator of G-protein signaling 17	AK046009|Rgs17|56533|regulator of G-protein signaling 17	AK078745|Rgs17|56533|regulator of G-protein signaling 17	AK163188|Rgs17|56533|regulator of G-protein signaling 17	AF191555|Rgs17|56533|regulator of G-protein signaling 17	BC064782|Rgs17|56533|regulator of G-protein signaling 17
mm9_v1_chr7_+_64846528_64846556	11.706	UGAAAUG	AK083051|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_008071|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr15_+_18750083_18750083	11.6889	UGAAAUG	AK138606|Cdh10|320873|cadherin 10	NM_009865|Cdh10|320873|cadherin 10
mm9_v1_chr18_+_65047408_65047414	11.4022	UGAAAUG	NM_001114386|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr11_-_41996141_41996431	11.2665	UGAAAUG	AK141596|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK034095|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	NM_010250|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr4_-_151235861_151235879	11.1144	UGAAAUG	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr11_+_16157685_16157805	10.912	UGAAAUG	AK033048|Vstm2a|211739|V-set and transmembrane domain containing 2A	NM_145967|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK032473|Vstm2a|211739|V-set and transmembrane domain containing 2A	BC027127|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK079096|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK137363|Vstm2a|211739|V-set and transmembrane domain containing 2A
mm9_v1_chr13_-_100286521_100286556	10.7821	UGAAAUG	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr3_-_32264572_32264614	10.553	UGAAAUG	NM_009517|Zmat3|22401|zinc finger matrin type 3	BC023726|Zmat3|22401|zinc finger matrin type 3
mm9_v1_chr1_+_66515003_66515020	10.3262	UGAAAUG	AK043914|Unc80|329178|unc-80 homolog (C. elegans)	FJ210934|Unc80|329178|unc-80 homolog (C. elegans)	NM_175510|Unc80|329178|unc-80 homolog (C. elegans)
mm9_v1_chr4_-_86873866_86873867	10.3049	UGAAAUG	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr1_+_63319842_63319842	10.2095	UGAAAUG	AK015271|Zdbf2|73884|zinc finger, DBF-type containing 2	AK132808|Zdbf2|73884|zinc finger, DBF-type containing 2	NM_028673|Zdbf2|73884|zinc finger, DBF-type containing 2
mm9_v1_chr18_+_34380575_34380671	10.0274	UGAAAUG	AK042021|Apc|11789|adenomatosis polyposis coli	AK080907|Apc|11789|adenomatosis polyposis coli	NM_007462|Apc|11789|adenomatosis polyposis coli	AK046280|Apc|11789|adenomatosis polyposis coli	AK045053|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr8_-_88214871_88214907	9.9851	UGAAAUG	AY138991|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC068168|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	NM_001081324|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2
mm9_v1_chr9_-_42924626_42924652	9.95267	UGAAAUG	AK128910|Tmem136|235300|transmembrane protein 136	BC139046|Tmem136|235300|transmembrane protein 136	BC139047|Tmem136|235300|transmembrane protein 136	AK158698|Tmem136|235300|transmembrane protein 136	NM_001034863|Tmem136|235300|transmembrane protein 136
mm9_v1_chr11_-_108205199_108205207	9.92536	UGAAAUG	AK147084|Prkca|18750|protein kinase C, alpha	NM_011101|Prkca|18750|protein kinase C, alpha
mm9_v1_chr8_+_46035561_46035561	9.4473	UGAAAUG	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr9_-_123760992_123761028	9.34026	UGAAAUG	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr18_-_31476721_31476786	9.29633	UGAAAUG	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr11_+_42233258_42233286	9.27769	UGAAAUG	AK090279|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	NM_008070|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145973|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145975|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr4_-_25727109_25727390	9.15514	UGAAAUG	AK049122|Fut9|14348|fucosyltransferase 9	NM_010243|Fut9|14348|fucosyltransferase 9	AK032177|Fut9|14348|fucosyltransferase 9	AK139133|Fut9|14348|fucosyltransferase 9	AK033607|Fut9|14348|fucosyltransferase 9
mm9_v1_chr12_+_30622876_30622919	9.14374	UGAAAUG	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr14_+_14117292_14117302	9.13706	UGAAAUG	AK078223|Synpr|72003|synaptoporin	NM_028052|Synpr|72003|synaptoporin
mm9_v1_chr18_+_65739883_65739883	9.00456	UGAAAUG	BC067032|Zfp532|328977|zinc finger protein 532	NM_207255|Zfp532|328977|zinc finger protein 532
mm9_v1_chr3_+_156224757_156225137	8.916	UGAAAUG	AK147253|Negr1|320840|neuronal growth regulator 1	NM_001039094|Negr1|320840|neuronal growth regulator 1	AK035218|Negr1|320840|neuronal growth regulator 1	NM_177274|Negr1|320840|neuronal growth regulator 1	AK030503|Negr1|320840|neuronal growth regulator 1	BC146005|Negr1|320840|neuronal growth regulator 1	BC146007|Negr1|320840|neuronal growth regulator 1	AK142298|Negr1|320840|neuronal growth regulator 1	AJ487032|Negr1|320840|neuronal growth regulator 1
mm9_v1_chrX_+_140127827_140127856	8.82518	UGAAAUG	AF082297|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195046|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195047|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496262|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496263|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943854|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr13_+_109444370_109444370	8.79437	UGAAAUG	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr1_+_17135421_17135611	8.78623	UGAAAUG	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr1_+_168184269_168184413	8.74538	UGAAAUG	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr8_-_48437701_48437701	8.68716	UGAAAUG	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chr11_-_55233581_55233646	8.55417	UGAAAUG	NM_009242|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr1_-_58642994_58643176	8.49502	UGAAAUG	AK052638|Fam126b|213056|family with sequence similarity 126, member B	BC068302|Fam126b|213056|family with sequence similarity 126, member B	AK144602|Fam126b|213056|family with sequence similarity 126, member B	BC049806|Fam126b|213056|family with sequence similarity 126, member B	AK168372|Fam126b|213056|family with sequence similarity 126, member B	NM_172513|Fam126b|213056|family with sequence similarity 126, member B
mm9_v1_chr18_-_15562126_15562266	8.49101	UGAAAUG	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr8_+_65430028_65430291	8.45809	UGAAAUG	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr2_+_102498839_102498845	8.40773	UGAAAUG	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr12_+_39510297_39510297	8.34033	UGAAAUG	AK032224|Etv1|14009|ets variant gene 1	NM_001163154|Etv1|14009|ets variant gene 1
mm9_v1_chr8_-_9771020_9771022	8.17793	UGAAAUG	BC117535|Fam155a|270028|family with sequence similarity 155, member A	AK032202|Fam155a|270028|family with sequence similarity 155, member A	NM_173446|Fam155a|270028|family with sequence similarity 155, member A
mm9_v1_chr11_-_70847078_70847118	8.03935	UGAAAUG	NM_134022|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr15_+_82105322_82105458	7.84934	UGAAAUG	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chr8_-_48374755_48374779	7.78163	UGAAAUG	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr8_-_92872139_92872206	7.77847	UGAAAUG	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr9_-_52487410_52487541	7.55286	UGAAAUG	BC109328|AI593442|330941|expressed sequence AI593442	NM_178906|AI593442|330941|expressed sequence AI593442	AK033979|AI593442|330941|expressed sequence AI593442
mm9_v1_chrX_+_139997806_139997811	7.4092	UGAAAUG	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr2_+_22477837_22477846	7.38769	UGAAAUG	D42051|Gad2|14417|glutamic acid decarboxylase 2	NM_008078|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr14_+_14286471_14286627	7.3728	UGAAAUG	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr16_-_67621054_67621188	7.35561	UGAAAUG	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr15_+_30102306_30102347	7.34109	UGAAAUG	NM_008729|Ctnnd2|18163|catenin (cadherin associated protein), delta 2	U90331|Ctnnd2|18163|catenin (cadherin associated protein), delta 2
mm9_v1_chr12_-_14158843_14158897	7.31644	UGAAAUG	BC005488|Fam84a|105005|family with sequence similarity 84, member A	NM_029007|Fam84a|105005|family with sequence similarity 84, member A	AK014625|Fam84a|105005|family with sequence similarity 84, member A
mm9_v1_chr11_-_87172419_87172533	7.07547	UGAAAUG	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chrX_+_143397055_143397188	7.06887	UGAAAUG	AK034512|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	AK043320|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	AK079648|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	AK139392|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	NM_008312|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	AK086348|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	BC098327|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	M63685|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C	X72230|Htr2c|15560|5-hydroxytryptamine (serotonin) receptor 2C
mm9_v1_chr5_+_89316245_89316323	6.96903	UGAAAUG	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr16_-_4419586_4419636	6.92644	UGAAAUG	NM_009624|Adcy9|11515|adenylate cyclase 9	Z50190|Adcy9|11515|adenylate cyclase 9
mm9_v1_chr15_-_8660729_8660806	6.90372	UGAAAUG	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr9_+_107465568_107465700	6.84197	UGAAAUG	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr18_-_31606908_31607087	6.83892	UGAAAUG	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chr18_+_33098694_33098843	6.77161	UGAAAUG	NM_009793|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	AK030219|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	BC070420|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr14_-_78936606_78936676	6.75513	UGAAAUG	NM_001164503|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chr12_+_72038843_72038862	6.71786	UGAAAUG	AK090043|Actr10|56444|ARP10 actin-related protein 10 homolog (S. cerevisiae)	NM_019785|Actr10|56444|ARP10 actin-related protein 10 homolog (S. cerevisiae)
mm9_v1_chr4_+_104829951_104829954	6.62793	UGAAAUG	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chrX_+_140100287_140100287	6.61922	UGAAAUG	NM_001195049|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	U39738|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr6_-_113841356_113841375	6.53272	UGAAAUG	DQ406822|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK051287|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	BC075643|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_001036684|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr2_+_65508501_65508501	6.47267	UGAAAUG	NM_001099298|Scn2a1|110876|sodium channel, voltage-gated, type II, alpha 1
mm9_v1_chrX_-_72823345_72823551	6.44949	UGAAAUG	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr18_+_64414012_64414029	6.43702	UGAAAUG	AK161482|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_009182|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK015874|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr2_-_104250490_104250490	6.39862	UGAAAUG	NM_001033347|D430041D05Rik|241589|RIKEN cDNA D430041D05 gene
mm9_v1_chr4_-_15076093_15076277	6.39602	UGAAAUG	AK039240|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AK081951|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AY278200|Necab1|69352|N-terminal EF-hand calcium binding protein 1	BC067055|Necab1|69352|N-terminal EF-hand calcium binding protein 1	NM_178617|Necab1|69352|N-terminal EF-hand calcium binding protein 1
mm9_v1_chr6_+_129483206_129483210	6.30218	UGAAAUG	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr15_+_32174546_32174624	6.27414	UGAAAUG	AK143026|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK045236|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	NM_009154|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK031231|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK054256|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK165206|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK039101|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK157706|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK141612|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
mm9_v1_chr12_+_81745188_81745226	6.23436	UGAAAUG	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr2_+_102546576_102546605	6.22419	UGAAAUG	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr5_+_67137054_67137078	6.20634	UGAAAUG	NM_001001980|Limch1|77569|LIM and calponin homology domains 1
mm9_v1_chr18_-_35374663_35374683	6.11274	UGAAAUG	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr9_-_75446888_75446974	6.05912	UGAAAUG	AK076562|Tmod2|50876|tropomodulin 2	AK015263|Tmod2|50876|tropomodulin 2	AK017072|Tmod2|50876|tropomodulin 2	BC052227|Tmod2|50876|tropomodulin 2	NM_001038710|Tmod2|50876|tropomodulin 2	AK015719|Tmod2|50876|tropomodulin 2
mm9_v1_chr8_+_46593141_46593271	6.01798	UGAAAUG	AK171632|Sorbs2|234214|sorbin and SH3 domain containing 2	NM_172752|Sorbs2|234214|sorbin and SH3 domain containing 2	AK139388|Sorbs2|234214|sorbin and SH3 domain containing 2	BC151038|Sorbs2|234214|sorbin and SH3 domain containing 2	BC172140|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr19_+_10969734_10969805	5.98994	UGAAAUG	AK088769|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	AF251503|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	BC004070|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	NM_134129|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
mm9_v1_chr6_-_12699189_12699252	5.89545	UGAAAUG	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr6_-_113991945_113992108	5.87216	UGAAAUG	AK147240|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	DQ406821|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147369|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147501|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_009723|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr7_-_64765360_64765428	5.84327	UGAAAUG	BC062112|Gabra5|110886|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5	AK038476|Gabra5|110886|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5	NM_176942|Gabra5|110886|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5	AK083185|Gabra5|110886|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
mm9_v1_chr2_+_48669628_48669670	5.81481	UGAAAUG	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr12_+_50483869_50483993	5.73239	UGAAAUG	AK132305|Foxg1|15228|forkhead box G1	NM_001160112|Foxg1|15228|forkhead box G1	NM_008241|Foxg1|15228|forkhead box G1	U36760|Foxg1|15228|forkhead box G1
mm9_v1_chr5_-_113006173_113006213	5.72343	UGAAAUG	BC065117|Sez6l|56747|seizure related 6 homolog like	AK083229|Sez6l|56747|seizure related 6 homolog like	AB206790|Sez6l|56747|seizure related 6 homolog like	DQ167195|Sez6l|56747|seizure related 6 homolog like	NM_019982|Sez6l|56747|seizure related 6 homolog like
mm9_v1_chrX_-_13423666_13423727	5.71844	UGAAAUG	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr18_+_37906739_37906841	5.69506	UGAAAUG	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chrX_+_139952975_139953253	5.64799	UGAAAUG	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr18_+_35020859_35020865	5.63551	UGAAAUG	M38174|Egr1|13653|early growth response 1	AK037837|Egr1|13653|early growth response 1	AK040925|Egr1|13653|early growth response 1	AK146322|Egr1|13653|early growth response 1	NM_007913|Egr1|13653|early growth response 1	AK145198|Egr1|13653|early growth response 1
mm9_v1_chr7_-_6683113_6683136	5.62914	UGAAAUG	BC085183|Peg3|18616|paternally expressed 3	BC072661|Peg3|18616|paternally expressed 3	AB003040|Peg3|18616|paternally expressed 3	AK044602|Peg3|18616|paternally expressed 3	AK053523|Peg3|18616|paternally expressed 3	AK141217|Peg3|18616|paternally expressed 3	NM_008817|Peg3|18616|paternally expressed 3	AK163845|Peg3|18616|paternally expressed 3
mm9_v1_chr9_+_80012837_80012863	5.61956	UGAAAUG	NM_001039546|Myo6|17920|myosin VI	AK053882|Myo6|17920|myosin VI
mm9_v1_chr15_-_100325669_100325697	5.56893	UGAAAUG	BC035295|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	NM_153407|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK146924|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK050864|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK166557|Csrnp2|207785|cysteine-serine-rich nuclear protein 2
mm9_v1_chr18_+_37844927_37845053	5.56001	UGAAAUG	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr2_+_164313584_164313634	5.52108	UGAAAUG	NM_001048229|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr4_-_141795288_141795317	5.50835	UGAAAUG	AK018497|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene	AK052809|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene	NM_001109685|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene
mm9_v1_chr18_+_37833939_37833988	5.49817	UGAAAUG	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr18_+_37828606_37828758	5.48128	UGAAAUG	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chr2_-_120796395_120796492	5.45869	UGAAAUG	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr9_-_75459125_75459169	5.44849	UGAAAUG	AK147581|Tmod2|50876|tropomodulin 2	NM_016711|Tmod2|50876|tropomodulin 2
mm9_v1_chrX_+_5624624_5624624	5.44836	UGAAAUG	AK048263|Nudt11|58242|nudix (nucleoside diphosphate linked moiety X)-type motif 11	NM_021431|Nudt11|58242|nudix (nucleoside diphosphate linked moiety X)-type motif 11
mm9_v1_chr18_+_37885359_37885546	5.42747	UGAAAUG	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr15_+_4325490_4325644	5.42621	UGAAAUG	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr18_+_37915375_37915594	5.40507	UGAAAUG	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr18_+_37966017_37966102	5.37566	UGAAAUG	AK089310|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC059175|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	NM_033581|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC098457|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr2_+_164312376_164312376	5.37366	UGAAAUG	AK003735|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048228|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chrX_-_45245608_45245760	5.35923	UGAAAUG	AK035068|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK030741|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK032978|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK052092|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC016071|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AF325920|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC057115|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	NM_053123|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
mm9_v1_chr18_+_37890662_37890807	5.32753	UGAAAUG	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr18_+_37901716_37901894	5.32611	UGAAAUG	BC054556|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	NM_033578|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	AY013808|Pcdhgb6|93703|protocadherin gamma subfamily B, 6
mm9_v1_chr6_+_86799460_86799754	5.31787	UGAAAUG	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr2_-_52532100_52532129	5.27489	UGAAAUG	AK147338|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_001037099|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr12_+_117724182_117724212	5.25164	UGAAAUG	NM_011215|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK081267|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK138655|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	BC048570|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2
mm9_v1_chr18_+_37849488_37849707	5.24585	UGAAAUG	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr12_-_100139666_100139693	5.23776	UGAAAUG	AK081694|Eml5|319670|echinoderm microtubule associated protein like 5	NM_001081191|Eml5|319670|echinoderm microtubule associated protein like 5
mm9_v1_chr2_-_156817751_156817861	5.14699	UGAAAUG	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr17_+_37182910_37182979	5.11489	UGAAAUG	BC054735|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1	NM_019439|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1	AK156397|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1	AK159584|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1
mm9_v1_chr10_-_18463500_18463563	5.11328	UGAAAUG	AK165602|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK148343|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK147963|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK147679|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	NM_001033258|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm9_v1_chrX_-_67618235_67618286	5.09646	UGAAAUG	AK132287|Ids|15931|iduronate 2-sulfatase	AK085237|Ids|15931|iduronate 2-sulfatase	AF538870|Ids|15931|iduronate 2-sulfatase	NM_010498|Ids|15931|iduronate 2-sulfatase
mm9_v1_chrX_+_162782484_162782852	5.09054	UGAAAUG	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr7_-_119302546_119302570	5.08081	UGAAAUG	AF177400|Dkk3|50781|dickkopf homolog 3 (Xenopus laevis)	AJ243964|Dkk3|50781|dickkopf homolog 3 (Xenopus laevis)	AK004853|Dkk3|50781|dickkopf homolog 3 (Xenopus laevis)	NM_015814|Dkk3|50781|dickkopf homolog 3 (Xenopus laevis)
mm9_v1_chr18_-_67708826_67708826	5.07286	UGAAAUG	BC058320|Spire1|68166|spire homolog 1 (Drosophila)	NM_176832|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr17_-_57199207_57199302	5.04846	UGAAAUG	BC072660|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_025877|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr4_+_13711928_13711928	5.03831	UGAAAUG	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr5_-_103640272_103640352	5.03609	UGAAAUG	AK036275|Mapk10|26414|mitogen-activated protein kinase 10	BC046625|Mapk10|26414|mitogen-activated protein kinase 10	AK163206|Mapk10|26414|mitogen-activated protein kinase 10	AK076990|Mapk10|26414|mitogen-activated protein kinase 10	BC026697|Mapk10|26414|mitogen-activated protein kinase 10	AK082242|Mapk10|26414|mitogen-activated protein kinase 10	NM_001081567|Mapk10|26414|mitogen-activated protein kinase 10	NM_009158|Mapk10|26414|mitogen-activated protein kinase 10
mm9_v1_chr2_-_52414072_52414117	5.02578	UGAAAUG	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr10_-_62342761_62342761	4.98419	UGAAAUG	GU079948|Tet1|52463|tet oncogene 1	NM_027384|Tet1|52463|tet oncogene 1
mm9_v1_chr2_+_138104219_138104260	4.98174	UGAAAUG	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr18_+_37839910_37840111	4.96398	UGAAAUG	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr2_+_138082301_138082378	4.9414	UGAAAUG	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr18_-_67712374_67712430	4.94077	UGAAAUG	BC058669|Spire1|68166|spire homolog 1 (Drosophila)	NM_194355|Spire1|68166|spire homolog 1 (Drosophila)	BC094375|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr2_-_66278870_66278908	4.92899	UGAAAUG	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr18_+_37896589_37896589	4.91282	UGAAAUG	BC079567|Pcdhga9|93717|protocadherin gamma subfamily A, 9	NM_033592|Pcdhga9|93717|protocadherin gamma subfamily A, 9
mm9_v1_chr12_+_53800369_53800393	4.88484	UGAAAUG	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr1_+_91351373_91351428	4.87897	UGAAAUG	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr1_-_194677940_194677940	4.87863	UGAAAUG	NM_001177794|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr11_-_78510874_78510941	4.87285	UGAAAUG	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chrX_+_162676870_162676901	4.87092	UGAAAUG	NM_001177961|Gpm6b|14758|glycoprotein m6b	NM_001177962|Gpm6b|14758|glycoprotein m6b	NM_023122|Gpm6b|14758|glycoprotein m6b	AK132778|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr18_+_37911236_37911432	4.86987	UGAAAUG	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chrX_-_133276147_133276147	4.85097	UGAAAUG	BC075653|Morf4l2|56397|mortality factor 4 like 2	NM_019768|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chrX_-_133275812_133275890	4.84029	UGAAAUG	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_-_105844882_105845009	4.80037	UGAAAUG	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr3_+_133903056_133903111	4.78762	UGAAAUG	NM_001004367|Cxxc4|319478|CXXC finger 4
mm9_v1_chr14_+_118536326_118536519	4.7819	UGAAAUG	NM_021434|Gpr180|58245|G protein-coupled receptor 180	AK169908|Gpr180|58245|G protein-coupled receptor 180	AB041545|Gpr180|58245|G protein-coupled receptor 180	AK170316|Gpr180|58245|G protein-coupled receptor 180	BC055726|Gpr180|58245|G protein-coupled receptor 180	AK053422|Gpr180|58245|G protein-coupled receptor 180	BC069981|Gpr180|58245|G protein-coupled receptor 180	AK212055|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chr18_+_37979199_37979219	4.77269	UGAAAUG	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr2_-_37502738_37502804	4.7429	UGAAAUG	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr14_+_76888242_76888347	4.7389	UGAAAUG	NM_001177751|Tsc22d1|21807|TSC22 domain family, member 1	AK136211|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr18_+_37821598_37821598	4.73206	UGAAAUG	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr14_+_84843366_84843370	4.73194	UGAAAUG	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr7_-_126138689_126138754	4.66278	UGAAAUG	NM_001195774|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	NM_022420|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr18_+_37925233_37925233	4.64816	UGAAAUG	BC056998|Pcdhga12|93724|protocadherin gamma subfamily A, 12	NM_033595|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr2_+_134611879_134611910	4.62941	UGAAAUG	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr18_+_37921454_37921532	4.61851	UGAAAUG	BC139099|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	BC139100|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	NM_033580|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	AY013810|Pcdhgb8|93705|protocadherin gamma subfamily B, 8
mm9_v1_chr18_+_37501355_37501397	4.61306	UGAAAUG	AK034205|Pcdhb7|93878|protocadherin beta 7	NM_053132|Pcdhb7|93878|protocadherin beta 7	AK046463|Pcdhb7|93878|protocadherin beta 7	AK029340|Pcdhb7|93878|protocadherin beta 7	BC094897|Pcdhb7|93878|protocadherin beta 7	AK043979|Pcdhb7|93878|protocadherin beta 7
mm9_v1_chr3_-_117063793_117063793	4.60486	UGAAAUG	AF541279|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK046782|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266266|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266267|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	NM_177664|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr18_+_37874471_37874595	4.58164	UGAAAUG	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr2_+_5872500_5872551	4.5713	UGAAAUG	BC049622|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	NM_001081132|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	BC138358|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	BC138359|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr3_+_157197301_157197382	4.5656	UGAAAUG	AK150291|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK152536|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168613|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167983|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167766|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC049115|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168162|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169335|Zranb2|53861|zinc finger, RAN-binding domain containing 2	NM_017381|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146275|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK160862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167756|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168033|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC132547|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC138575|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK166534|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169114|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146854|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AF133818|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr12_+_38607291_38607482	4.56369	UGAAAUG	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr5_+_96802973_96802973	4.55159	UGAAAUG	AJ489280|Fras1|231470|Fraser syndrome 1 homolog (human)	NM_175473|Fras1|231470|Fraser syndrome 1 homolog (human)
mm9_v1_chr18_+_37866747_37866882	4.53546	UGAAAUG	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr4_-_124527811_124527973	4.4585	UGAAAUG	NM_001142727|1110065P20Rik|68920|RIKEN cDNA 1110065P20 gene
mm9_v1_chr9_-_108363911_108363911	4.45784	UGAAAUG	AK019849|Klhdc8b|78267|kelch domain containing 8B	NM_030075|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr18_+_69505374_69505487	4.39665	UGAAAUG	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr11_-_11927973_11927973	4.38091	UGAAAUG	BC016111|Grb10|14783|growth factor receptor bound protein 10	NM_001177629|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr14_-_25065141_25065143	4.32264	UGAAAUG	AK147699|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_001163513|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_027726|Dlg5|71228|discs, large homolog 5 (Drosophila)
mm9_v1_chr8_-_96622710_96622710	4.31683	UGAAAUG	AF342737|Bbs2|67378|Bardet-Biedl syndrome 2 (human)	NM_026116|Bbs2|67378|Bardet-Biedl syndrome 2 (human)
mm9_v1_chr6_-_137118238_137118241	4.31356	UGAAAUG	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr1_-_194681914_194681945	4.27289	UGAAAUG	BC060251|Sertad4|214791|SERTA domain containing 4	NM_198247|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr4_-_82151180_82151288	4.26593	UGAAAUG	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr6_-_13789847_13789902	4.25361	UGAAAUG	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr11_-_20731016_20731238	4.25	UGAAAUG	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr2_-_168055851_168055889	4.17322	UGAAAUG	AB004789|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1	BC061151|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1	AK005268|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1	AK008548|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1	AK004834|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1	NM_010072|Dpm1|13480|dolichol-phosphate (beta-D) mannosyltransferase 1
mm9_v1_chr18_+_37880036_37880207	4.16074	UGAAAUG	AK083581|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	BC138701|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	AY013806|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	NM_033576|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr12_+_77425836_77425924	4.13928	UGAAAUG	AK139319|Akap5|238276|A kinase (PRKA) anchor protein 5	NM_001101471|Akap5|238276|A kinase (PRKA) anchor protein 5
mm9_v1_chr6_-_124414668_124414803	4.1313	UGAAAUG	AJ278486|Clstn3|232370|calsyntenin 3	BC055054|Clstn3|232370|calsyntenin 3	AK032336|Clstn3|232370|calsyntenin 3	NM_153508|Clstn3|232370|calsyntenin 3
mm9_v1_chrX_-_159081510_159081550	4.10226	UGAAAUG	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr18_+_37854011_37854154	4.09973	UGAAAUG	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr6_+_71657791_71657963	4.07851	UGAAAUG	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr2_+_71819264_71819343	4.07383	UGAAAUG	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr19_-_57083064_57083064	4.06636	UGAAAUG	NM_001177796|Afap1l2|226250|actin filament associated protein 1-like 2	NM_001177797|Afap1l2|226250|actin filament associated protein 1-like 2	NM_146102|Afap1l2|226250|actin filament associated protein 1-like 2
mm9_v1_chr19_-_4989865_4989972	4.06499	UGAAAUG	AB049835|Npas4|225872|neuronal PAS domain protein 4	BC129861|Npas4|225872|neuronal PAS domain protein 4	AK032607|Npas4|225872|neuronal PAS domain protein 4	NM_153553|Npas4|225872|neuronal PAS domain protein 4
mm9_v1_chr7_+_107855215_107855319	4.06123	UGAAAUG	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr14_+_76815627_76815627	4.03526	UGAAAUG	BC058660|Tsc22d1|21807|TSC22 domain family, member 1	NM_207652|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr1_-_23389950_23390192	4.02424	UGAAAUG	NM_001081079|Ogfrl1|70155|opioid growth factor receptor-like 1
mm9_v1_chr1_+_9591347_9591354	4.00705	UGAAAUG	AK043759|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene	NM_178399|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr18_+_37974732_37974732	3.98782	UGAAAUG	BC064808|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	NM_033582|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr4_+_13670425_13670448	3.96982	UGAAAUG	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr11_-_30098163_30098286	3.96747	UGAAAUG	AF017112|Spnb2|20742|spectrin beta 2	AF016040|Spnb2|20742|spectrin beta 2	AK079842|Spnb2|20742|spectrin beta 2	AK157727|Spnb2|20742|spectrin beta 2	AK169544|Spnb2|20742|spectrin beta 2	NM_009260|Spnb2|20742|spectrin beta 2
mm9_v1_chr7_+_129432585_129432762	3.93956	UGAAAUG	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr10_+_105907394_105907408	3.92556	UGAAAUG	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr15_+_87455659_87455659	3.91167	UGAAAUG	AY325124|Fam19a5|106014|family with sequence similarity 19, member A5	BC015306|Fam19a5|106014|family with sequence similarity 19, member A5	NM_134096|Fam19a5|106014|family with sequence similarity 19, member A5
mm9_v1_chr5_-_34630913_34631012	3.9086	UGAAAUG	BC139050|Zfyve28|231125|zinc finger, FYVE domain containing 28	BC139051|Zfyve28|231125|zinc finger, FYVE domain containing 28	AK129414|Zfyve28|231125|zinc finger, FYVE domain containing 28	NM_001015039|Zfyve28|231125|zinc finger, FYVE domain containing 28	AK036334|Zfyve28|231125|zinc finger, FYVE domain containing 28
mm9_v1_chr5_-_8622882_8622951	3.89371	UGAAAUG	BC058808|Rundc3b|242819|RUN domain containing 3B	NM_198620|Rundc3b|242819|RUN domain containing 3B
mm9_v1_chr2_-_73730605_73730700	3.89088	UGAAAUG	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr6_+_8900018_8900018	3.83838	UGAAAUG	BC145953|Nxph1|18231|neurexophilin 1	BC145955|Nxph1|18231|neurexophilin 1	NM_008751|Nxph1|18231|neurexophilin 1
mm9_v1_chr2_-_37278415_37278506	3.81813	UGAAAUG	BC117951|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	BC117952|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	AK053071|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	NM_001100591|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr13_+_94077988_94077988	3.79423	UGAAAUG	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr9_+_23027519_23027519	3.77026	UGAAAUG	AF454954|Bmper|73230|BMP-binding endothelial regulator	NM_028472|Bmper|73230|BMP-binding endothelial regulator
mm9_v1_chr4_-_57314708_57314708	3.74917	UGAAAUG	AK052928|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3	NM_011207|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3
mm9_v1_chr3_-_18143265_18143337	3.74628	UGAAAUG	AK013034|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1	U36993|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1	BC038810|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1	AK140100|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1	AK172152|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1	NM_007825|Cyp7b1|13123|cytochrome P450, family 7, subfamily b, polypeptide 1
mm9_v1_chr11_+_89891661_89891661	3.73993	UGAAAUG	AK007878|Tmem100|67888|transmembrane protein 100	NM_026433|Tmem100|67888|transmembrane protein 100
mm9_v1_chr14_+_76904316_76904371	3.71446	UGAAAUG	AK147039|Tsc22d1|21807|TSC22 domain family, member 1	NM_009366|Tsc22d1|21807|TSC22 domain family, member 1	AK145204|Tsc22d1|21807|TSC22 domain family, member 1	AK135277|Tsc22d1|21807|TSC22 domain family, member 1	AK135282|Tsc22d1|21807|TSC22 domain family, member 1	AK135514|Tsc22d1|21807|TSC22 domain family, member 1	AK148732|Tsc22d1|21807|TSC22 domain family, member 1	X62940|Tsc22d1|21807|TSC22 domain family, member 1	AK179000|Tsc22d1|21807|TSC22 domain family, member 1	BC026703|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chrX_-_133275693_133275798	3.71335	UGAAAUG	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr1_-_72921438_72921462	3.69152	UGAAAUG	BC057447|Igfbp5|16011|insulin-like growth factor binding protein 5	NM_010518|Igfbp5|16011|insulin-like growth factor binding protein 5	AK142108|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr13_+_15555483_15555555	3.66199	UGAAAUG	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr10_+_94977721_94977835	3.64825	UGAAAUG	AK005302|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK161968|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK005788|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC067069|Ube2n|93765|ubiquitin-conjugating enzyme E2N	NM_080560|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AY039837|Ube2n|93765|ubiquitin-conjugating enzyme E2N	Y09873|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC034898|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC052203|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC132630|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC138211|Ube2n|93765|ubiquitin-conjugating enzyme E2N
mm9_v1_chr9_-_106350001_106350018	3.64375	UGAAAUG	NM_001110271|Abhd14a|68644|abhydrolase domain containing 14A	NM_001110272|Abhd14a|68644|abhydrolase domain containing 14A	NM_145919|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr18_+_69504145_69504185	3.63694	UGAAAUG	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr18_+_4634926_4634930	3.62801	UGAAAUG	AK142315|9430020K01Rik|240185|RIKEN cDNA 9430020K01 gene	NM_001081963|9430020K01Rik|240185|RIKEN cDNA 9430020K01 gene
mm9_v1_chr11_+_11014018_11014018	3.6028	UGAAAUG	AK141514|Vwc2|319922|von Willebrand factor C domain containing 2	NM_177033|Vwc2|319922|von Willebrand factor C domain containing 2
mm9_v1_chr9_-_123760686_123760944	3.59565	UGAAAUG	AJ428065|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_148925|Fyco1|17281|FYVE and coiled-coil domain containing 1	BC053712|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr11_-_5344795_5344912	3.59523	UGAAAUG	AK163639|Znrf3|407821|zinc and ring finger 3	NM_001080924|Znrf3|407821|zinc and ring finger 3
mm9_v1_chr2_-_12932442_12932490	3.58661	UGAAAUG	EU399230|C1ql3|227580|C1q-like 3	BC024634|C1ql3|227580|C1q-like 3	NM_153155|C1ql3|227580|C1q-like 3
mm9_v1_chr9_+_111214242_111214242	3.56309	UGAAAUG	AK079552|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1	NM_001164659|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1
mm9_v1_chr3_+_75878452_75878519	3.56196	UGAAAUG	AK140611|Fstl5|213262|follistatin-like 5	AK033652|Fstl5|213262|follistatin-like 5	AK081152|Fstl5|213262|follistatin-like 5	AF374460|Fstl5|213262|follistatin-like 5	BC075640|Fstl5|213262|follistatin-like 5	NM_178673|Fstl5|213262|follistatin-like 5
mm9_v1_chr7_-_91558468_91558528	3.55557	UGAAAUG	BC054546|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2	NM_007488|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2
mm9_v1_chr2_+_164311639_164311740	3.55194	UGAAAUG	NM_001048227|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr9_-_95307645_95307747	3.4986	UGAAAUG	NM_018763|Chst2|54371|carbohydrate sulfotransferase 2
mm9_v1_chr1_-_177422630_177422675	3.45048	UGAAAUG	BC051133|Rgs7|24012|regulator of G protein signaling 7	NM_001199003|Rgs7|24012|regulator of G protein signaling 7	NM_011880|Rgs7|24012|regulator of G protein signaling 7
mm9_v1_chr13_-_64349830_64349845	3.43406	UGAAAUG	AK041155|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001122989|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr7_-_89079335_89079355	3.43318	UGAAAUG	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr18_+_58038278_58038331	3.42794	UGAAAUG	NM_009194|Slc12a2|20496|solute carrier family 12, member 2	U13174|Slc12a2|20496|solute carrier family 12, member 2
mm9_v1_chr11_-_62542594_62542594	3.34921	UGAAAUG	AF281141|Zfp287|170740|zinc finger protein 287	NM_133208|Zfp287|170740|zinc finger protein 287
mm9_v1_chr4_+_33295965_33295965	3.31695	UGAAAUG	AK046869|Srsf13b|272009|serine/arginine-rich splicing factor 13B	NM_177774|Srsf13b|272009|serine/arginine-rich splicing factor 13B
mm9_v1_chr17_-_81127339_81127433	3.30299	UGAAAUG	AK014711|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3	NM_001081357|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3
mm9_v1_chr16_-_34514112_34514198	3.29476	UGAAAUG	BC157950|Kalrn|545156|kalirin, RhoGEF kinase	BC172101|Kalrn|545156|kalirin, RhoGEF kinase	NM_001164268|Kalrn|545156|kalirin, RhoGEF kinase	NM_177357|Kalrn|545156|kalirin, RhoGEF kinase	AK147314|Kalrn|545156|kalirin, RhoGEF kinase	AK147518|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr9_-_21856445_21856470	3.28541	UGAAAUG	U29148|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC052097|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	AK090281|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	NM_010487|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr3_+_30691760_30691806	3.27945	UGAAAUG	BC017162|Sec62|69276|SEC62 homolog (S. cerevisiae)	NM_027016|Sec62|69276|SEC62 homolog (S. cerevisiae)
mm9_v1_chr7_-_36103433_36103463	3.25622	UGAAAUG	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr9_-_58884114_58884258	3.23808	UGAAAUG	Y09535|Neo1|18007|neogenin	BC054540|Neo1|18007|neogenin	AK084609|Neo1|18007|neogenin	NM_001042752|Neo1|18007|neogenin	NM_008684|Neo1|18007|neogenin
mm9_v1_chr1_+_63492447_63492511	3.22421	UGAAAUG	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr13_+_93195850_93196061	3.21923	UGAAAUG	AK078203|Ankrd34b|218440|ankyrin repeat domain 34B	AK090387|Ankrd34b|218440|ankyrin repeat domain 34B	NM_175455|Ankrd34b|218440|ankyrin repeat domain 34B	BC096609|Ankrd34b|218440|ankyrin repeat domain 34B	BC119312|Ankrd34b|218440|ankyrin repeat domain 34B	BC119314|Ankrd34b|218440|ankyrin repeat domain 34B
mm9_v1_chr1_-_21952022_21952022	3.21917	UGAAAUG	AK147264|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	NM_001160139|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	NM_023872|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5
mm9_v1_chr9_-_67407509_67407509	3.17435	UGAAAUG	NM_001081242|Tln2|70549|talin 2
mm9_v1_chr2_+_164311755_164311970	3.16993	UGAAAUG	BC030298|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_026797|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr2_+_52716901_52716906	3.13284	UGAAAUG	NM_172409|Fmnl2|71409|formin-like 2
mm9_v1_chr13_-_9764376_9764487	3.13248	UGAAAUG	BC022945|Zmynd11|66505|zinc finger, MYND domain containing 11	AK077732|Zmynd11|66505|zinc finger, MYND domain containing 11	NM_144516|Zmynd11|66505|zinc finger, MYND domain containing 11
mm9_v1_chr13_+_54472705_54472742	3.11585	UGAAAUG	NM_009946|Cplx2|12890|complexin 2
mm9_v1_chr6_+_4853319_4853431	3.10883	UGAAAUG	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr4_+_54960816_54960816	3.10552	UGAAAUG	NM_172867|Zfp462|242466|zinc finger protein 462
mm9_v1_chr5_-_46030523_46030852	3.0761	UGAAAUG	AK081567|Fam184b|58227|family with sequence similarity 184, member B	BC056379|Fam184b|58227|family with sequence similarity 184, member B	NM_021416|Fam184b|58227|family with sequence similarity 184, member B	AB257856|Fam184b|58227|family with sequence similarity 184, member B
mm9_v1_chr4_-_81088575_81088736	3.0642	UGAAAUG	AJ131869|Mpdz|17475|multiple PDZ domain protein	NM_010820|Mpdz|17475|multiple PDZ domain protein	AK051782|Mpdz|17475|multiple PDZ domain protein	AK160603|Mpdz|17475|multiple PDZ domain protein
mm9_v1_chr10_-_80693488_80693567	3.0564	UGAAAUG	AY349150|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	BC048903|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038990|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	NM_178662|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK039411|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK028298|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038483|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK162959|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK086723|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)
mm9_v1_chr11_-_119089774_119089812	3.03644	UGAAAUG	BC057634|Tbc1d16|207592|TBC1 domain family, member 16	AK047555|Tbc1d16|207592|TBC1 domain family, member 16	NM_172443|Tbc1d16|207592|TBC1 domain family, member 16
mm9_v1_chr13_-_54150991_54151026	3.02885	UGAAAUG	AK044723|Drd1a|13488|dopamine receptor D1A	NM_010076|Drd1a|13488|dopamine receptor D1A
mm9_v1_chr4_+_34011567_34011625	3.00947	UGAAAUG	BC075644|Cnr1|12801|cannabinoid receptor 1 (brain)	BC070447|Cnr1|12801|cannabinoid receptor 1 (brain)	NM_007726|Cnr1|12801|cannabinoid receptor 1 (brain)	AY522554|Cnr1|12801|cannabinoid receptor 1 (brain)
mm9_v1_chr8_+_93352723_93352742	2.99458	UGAAAUG	AK034446|Chd9|109151|chromodomain helicase DNA binding protein 9	NM_177224|Chd9|109151|chromodomain helicase DNA binding protein 9	AK039562|Chd9|109151|chromodomain helicase DNA binding protein 9	DQ127229|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr15_-_43002356_43002397	2.97997	UGAAAUG	AK087485|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	NM_172815|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	AK052457|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	AK049891|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)
mm9_v1_chr9_-_44543245_44543320	2.97785	UGAAAUG	BC058712|Phldb1|102693|pleckstrin homology-like domain, family B, member 1	NM_153537|Phldb1|102693|pleckstrin homology-like domain, family B, member 1
mm9_v1_chr17_+_17539635_17539669	2.95803	UGAAAUG	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr17_-_82137708_82137731	2.9298	UGAAAUG	AF004666|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112798|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_011406|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	U70033|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	AK084813|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene	AK085810|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene
mm9_v1_chr13_-_70776511_70776699	2.89189	UGAAAUG	AK143610|BC018507|218333|cDNA sequence BC018507	NM_144837|BC018507|218333|cDNA sequence BC018507
mm9_v1_chr13_-_14615371_14615494	2.86889	UGAAAUG	AK051569|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK084246|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK086170|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK047678|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_001081348|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK053694|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr5_-_124329899_124330028	2.85975	UGAAAUG	BC141305|Gpr81|243270|G protein-coupled receptor 81	AK029064|Gpr81|243270|G protein-coupled receptor 81	AK046700|Gpr81|243270|G protein-coupled receptor 81	NM_175520|Gpr81|243270|G protein-coupled receptor 81
mm9_v1_chr12_+_96930429_96930467	2.85535	UGAAAUG	AK135149|Flrt2|399558|fibronectin leucine rich transmembrane protein 2	NM_201518|Flrt2|399558|fibronectin leucine rich transmembrane protein 2	AK136973|Flrt2|399558|fibronectin leucine rich transmembrane protein 2	BC067058|Flrt2|399558|fibronectin leucine rich transmembrane protein 2	AK041311|Flrt2|399558|fibronectin leucine rich transmembrane protein 2	BC096471|Flrt2|399558|fibronectin leucine rich transmembrane protein 2
mm9_v1_chr12_+_85455277_85455306	2.84966	UGAAAUG	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr8_+_122668828_122668828	2.84257	UGAAAUG	BC027126|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene	NM_001163760|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene
mm9_v1_chr5_-_5694325_5694567	2.82467	UGAAAUG	BC043459|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150881|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150889|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166162|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK052981|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_028734|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr2_+_31428244_31428356	2.82038	UGAAAUG	NM_001033389|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166081|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK137035|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK145377|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166478|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK167671|Fubp3|320267|far upstream element (FUSE) binding protein 3
mm9_v1_chr3_-_9610062_9610137	2.8092	UGAAAUG	AF292939|Zfp704|170753|zinc finger protein 704	NM_133218|Zfp704|170753|zinc finger protein 704
mm9_v1_chr18_-_6135924_6136095	2.79014	UGAAAUG	AK031648|Arhgap12|75415|Rho GTPase activating protein 12	AK012717|Arhgap12|75415|Rho GTPase activating protein 12	AK077063|Arhgap12|75415|Rho GTPase activating protein 12	NM_001039692|Arhgap12|75415|Rho GTPase activating protein 12	NM_029277|Arhgap12|75415|Rho GTPase activating protein 12
mm9_v1_chr3_+_105255247_105255337	2.77329	UGAAAUG	NM_001039347|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AK147574|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr15_-_11925724_11925789	2.76291	UGAAAUG	J03750|Sub1|20024|SUB1 homolog (S. cerevisiae)	BC010967|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK146335|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK154114|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK049260|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK132021|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK151734|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK048371|Sub1|20024|SUB1 homolog (S. cerevisiae)	NM_011294|Sub1|20024|SUB1 homolog (S. cerevisiae)
mm9_v1_chr1_-_160887568_160887568	2.76206	UGAAAUG	NM_001085376|Pappa2|23850|pappalysin 2
mm9_v1_chr8_+_81552335_81552485	2.75034	UGAAAUG	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chrX_+_147778717_147778787	2.72763	UGAAAUG	AK030477|Fam120c|207375|family with sequence similarity 120, member C	AK086058|Fam120c|207375|family with sequence similarity 120, member C	AK156920|Fam120c|207375|family with sequence similarity 120, member C	AY150023|Fam120c|207375|family with sequence similarity 120, member C	AY150024|Fam120c|207375|family with sequence similarity 120, member C	BC137973|Fam120c|207375|family with sequence similarity 120, member C	BC171940|Fam120c|207375|family with sequence similarity 120, member C	NM_198105|Fam120c|207375|family with sequence similarity 120, member C	AK136727|Fam120c|207375|family with sequence similarity 120, member C	AK166381|Fam120c|207375|family with sequence similarity 120, member C
mm9_v1_chr8_+_86423968_86424035	2.71962	UGAAAUG	NM_181039|Lphn1|330814|latrophilin 1	AK147455|Lphn1|330814|latrophilin 1
mm9_v1_chr1_-_82287990_82288082	2.71814	UGAAAUG	AK045317|Irs1|16367|insulin receptor substrate 1	NM_010570|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr9_+_111174321_111174442	2.6843	UGAAAUG	BC018474|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	NM_175266|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK032284|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK043518|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK030084|Epm2aip1|77781|EPM2A (laforin) interacting protein 1
mm9_v1_chr8_+_14911653_14911743	2.68363	UGAAAUG	AK147669|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK051721|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	NM_001037736|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	NM_172751|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK054038|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK220332|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	BC066074|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10
mm9_v1_chr4_-_104782444_104782511	2.67592	UGAAAUG	NM_178143|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138565|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138566|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr3_-_141645214_141645214	2.66566	UGAAAUG	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr17_+_6106829_6106853	2.65953	UGAAAUG	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chr6_-_137119016_137119017	2.65622	UGAAAUG	NM_181988|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	BC026463|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr7_+_107376116_107376219	2.64292	UGAAAUG	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr3_+_117278144_117278545	2.62556	UGAAAUG	AK032034|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK082692|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	BC031879|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK076176|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	NM_029425|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK014763|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK043629|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene
mm9_v1_chr9_+_74885522_74885560	2.62524	UGAAAUG	BC040206|Arpp19|59046|cAMP-regulated phosphoprotein 19	NM_021548|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr16_-_89818596_89818596	2.61872	UGAAAUG	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr5_-_5694033_5694105	2.60726	UGAAAUG	AK145468|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166607|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK162343|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK165644|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK089927|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_001103156|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_001103157|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr18_-_25324465_25324465	2.5989	UGAAAUG	NM_001142697|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene
mm9_v1_chr15_-_97077552_97077717	2.58978	UGAAAUG	BC095990|Amigo2|105827|adhesion molecule with Ig like domain 2	AK030848|Amigo2|105827|adhesion molecule with Ig like domain 2	AK038783|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164563|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164602|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_178114|Amigo2|105827|adhesion molecule with Ig like domain 2
mm9_v1_chr7_-_135605026_135605189	2.57524	UGAAAUG	NM_009383|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	AK132677|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr12_-_4848240_4848402	2.53214	UGAAAUG	AB107918|Fkbp1b|14226|FK506 binding protein 1b	AB285017|Fkbp1b|14226|FK506 binding protein 1b	AF060872|Fkbp1b|14226|FK506 binding protein 1b	BC061121|Fkbp1b|14226|FK506 binding protein 1b	BC049596|Fkbp1b|14226|FK506 binding protein 1b	AK005201|Fkbp1b|14226|FK506 binding protein 1b	NM_016863|Fkbp1b|14226|FK506 binding protein 1b
mm9_v1_chr10_-_75700507_75700611	2.52908	UGAAAUG	BC122563|Prmt2|15468|protein arginine N-methyltransferase 2	BC125275|Prmt2|15468|protein arginine N-methyltransferase 2	AF169620|Prmt2|15468|protein arginine N-methyltransferase 2	BC088997|Prmt2|15468|protein arginine N-methyltransferase 2	AK144412|Prmt2|15468|protein arginine N-methyltransferase 2	AK146754|Prmt2|15468|protein arginine N-methyltransferase 2	AK077456|Prmt2|15468|protein arginine N-methyltransferase 2	AK145829|Prmt2|15468|protein arginine N-methyltransferase 2	AK146966|Prmt2|15468|protein arginine N-methyltransferase 2	AK159186|Prmt2|15468|protein arginine N-methyltransferase 2	AK140200|Prmt2|15468|protein arginine N-methyltransferase 2	NM_001077638|Prmt2|15468|protein arginine N-methyltransferase 2	NM_133182|Prmt2|15468|protein arginine N-methyltransferase 2
mm9_v1_chr9_-_56008828_56008912	2.51602	UGAAAUG	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr6_+_14851348_14851478	2.51545	UGAAAUG	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr15_-_101681183_101681224	2.50516	UGAAAUG	BC117842|Krt1|16678|keratin 1	BC117843|Krt1|16678|keratin 1	AK019521|Krt1|16678|keratin 1	NM_008473|Krt1|16678|keratin 1	M10937|Krt1|16678|keratin 1
mm9_v1_chr7_+_120909509_120909519	2.49181	UGAAAUG	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr9_+_74885420_74885510	2.48838	UGAAAUG	NM_001142655|Arpp19|59046|cAMP-regulated phosphoprotein 19	AK076052|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chrX_+_135744582_135744582	2.48146	UGAAAUG	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chrX_+_99044723_99044723	2.46905	UGAAAUG	AK142977|Nhsl2|100042480|NHS-like 2	NM_001163610|Nhsl2|100042480|NHS-like 2
mm9_v1_chr6_+_122824491_122824588	2.44298	UGAAAUG	BC119133|Necap1|67602|NECAP endocytosis associated 1	BC120841|Necap1|67602|NECAP endocytosis associated 1	AK004805|Necap1|67602|NECAP endocytosis associated 1	AK081598|Necap1|67602|NECAP endocytosis associated 1	AK168500|Necap1|67602|NECAP endocytosis associated 1	NM_026267|Necap1|67602|NECAP endocytosis associated 1	BC011466|Necap1|67602|NECAP endocytosis associated 1	AK005263|Necap1|67602|NECAP endocytosis associated 1	BC098227|Necap1|67602|NECAP endocytosis associated 1	AK220236|Necap1|67602|NECAP endocytosis associated 1
mm9_v1_chr9_-_119977358_119977413	2.43538	UGAAAUG	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr3_+_134491969_134492012	2.40925	UGAAAUG	AK031898|Tacr3|21338|tachykinin receptor 3	NM_021382|Tacr3|21338|tachykinin receptor 3	BC066845|Tacr3|21338|tachykinin receptor 3	X87823|Tacr3|21338|tachykinin receptor 3
mm9_v1_chr12_+_4082573_4082658	2.40184	UGAAAUG	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr7_+_58877199_58877199	2.39463	UGAAAUG	NM_080853|Slc17a6|140919|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm9_v1_chr16_-_87432721_87432850	2.39437	UGAAAUG	AK173009|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK165062|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK036725|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK019706|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116272|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116273|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	NM_001081068|Ltn1|78913|listerin E3 ubiquitin protein ligase 1
mm9_v1_chr15_-_11835393_11835453	2.36609	UGAAAUG	D78175|Npr3|18162|natriuretic peptide receptor 3	BC055897|Npr3|18162|natriuretic peptide receptor 3	NM_001039181|Npr3|18162|natriuretic peptide receptor 3	NM_008728|Npr3|18162|natriuretic peptide receptor 3
mm9_v1_chrX_+_160346948_160347157	2.35927	UGAAAUG	AK045558|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK047724|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK167690|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK053941|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK005223|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	BC046964|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	NM_026887|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK043776|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit
mm9_v1_chr4_-_41644071_41644122	2.35696	UGAAAUG	AF068615|Cntfr|12804|ciliary neurotrophic factor receptor	AK015675|Cntfr|12804|ciliary neurotrophic factor receptor	NM_001146080|Cntfr|12804|ciliary neurotrophic factor receptor	NM_016673|Cntfr|12804|ciliary neurotrophic factor receptor
mm9_v1_chr16_-_37385024_37385045	2.3558	UGAAAUG	AK043658|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114611|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114612|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114613|Stxbp5l|207227|syntaxin binding protein 5-like	NM_172440|Stxbp5l|207227|syntaxin binding protein 5-like
mm9_v1_chr6_+_115803545_115803666	2.34073	UGAAAUG	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chrX_+_135751704_135751704	2.33671	UGAAAUG	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr16_-_91011339_91011552	2.32948	UGAAAUG	NM_001045515|Synj1|104015|synaptojanin 1	NM_001164483|Synj1|104015|synaptojanin 1
mm9_v1_chr3_-_10331334_10331440	2.3293	UGAAAUG	BC055722|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AF042730|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160467|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK083238|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK145472|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK011770|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160203|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK165977|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	BC049080|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK078406|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK152774|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK147778|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK153457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK168457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	NM_018864|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1
mm9_v1_chr2_+_119625249_119625324	2.32265	UGAAAUG	BC066058|Tyro3|22174|TYRO3 protein tyrosine kinase 3	NM_019392|Tyro3|22174|TYRO3 protein tyrosine kinase 3	BC082325|Tyro3|22174|TYRO3 protein tyrosine kinase 3	X78103|Tyro3|22174|TYRO3 protein tyrosine kinase 3	U18933|Tyro3|22174|TYRO3 protein tyrosine kinase 3
mm9_v1_chrX_+_53862956_53863040	2.31731	UGAAAUG	NM_172780|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK032326|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	BC130221|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK122232|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm9_v1_chr7_-_116651647_116651647	2.29505	UGAAAUG	AY572454|Trim66|330627|tripartite motif-containing 66	AY572455|Trim66|330627|tripartite motif-containing 66	NM_001170912|Trim66|330627|tripartite motif-containing 66	NM_181853|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr5_+_106305563_106305620	2.29369	UGAAAUG	AK017693|Zfp326|54367|zinc finger protein 326	AK032801|Zfp326|54367|zinc finger protein 326	BC039041|Zfp326|54367|zinc finger protein 326	NM_018759|Zfp326|54367|zinc finger protein 326	BC005567|Zfp326|54367|zinc finger protein 326	BC037055|Zfp326|54367|zinc finger protein 326	AK146438|Zfp326|54367|zinc finger protein 326	AB012725|Zfp326|54367|zinc finger protein 326
mm9_v1_chr3_-_10440061_10440125	2.28159	UGAAAUG	BC070431|Snx16|74718|sorting nexin 16	AK032055|Snx16|74718|sorting nexin 16	AK015872|Snx16|74718|sorting nexin 16	AK043975|Snx16|74718|sorting nexin 16	AK166422|Snx16|74718|sorting nexin 16	NM_001127191|Snx16|74718|sorting nexin 16	NM_029068|Snx16|74718|sorting nexin 16
mm9_v1_chr8_-_63462080_63462110	2.2745	UGAAAUG	AK159698|Clcn3|12725|chloride channel 3	AK036501|Clcn3|12725|chloride channel 3	NM_007711|Clcn3|12725|chloride channel 3	NM_173873|Clcn3|12725|chloride channel 3	NM_173874|Clcn3|12725|chloride channel 3
mm9_v1_chr4_+_11413062_11413204	2.26751	UGAAAUG	AK170075|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK155623|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	NM_001081183|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK076731|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK162531|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	BC033309|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK052499|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK034232|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK122509|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene
mm9_v1_chr18_+_63868337_63868349	2.25054	UGAAAUG	AK052730|Wdr7|104082|WD repeat domain 7	NM_001014981|Wdr7|104082|WD repeat domain 7
mm9_v1_chr9_-_64799413_64799413	2.24739	UGAAAUG	BC016094|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_144813|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
mm9_v1_chr15_-_103070227_103070257	2.24297	UGAAAUG	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr13_+_51503986_51504237	2.22663	UGAAAUG	NM_010101|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK029852|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK030134|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK078443|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK084944|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK085180|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK087076|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK087139|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK028043|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK047268|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK081919|S1pr3|13610|sphingosine-1-phosphate receptor 3	BC064007|S1pr3|13610|sphingosine-1-phosphate receptor 3	BC068176|S1pr3|13610|sphingosine-1-phosphate receptor 3	AK083405|S1pr3|13610|sphingosine-1-phosphate receptor 3
mm9_v1_chr8_-_37676995_37677010	2.21729	UGAAAUG	AK162413|Dlc1|50768|deleted in liver cancer 1	NM_015802|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr13_+_93614714_93614741	2.19931	UGAAAUG	AK090249|Mtx3|382793|metaxin 3	NM_001162945|Mtx3|382793|metaxin 3
mm9_v1_chr8_-_37796104_37796107	2.18929	UGAAAUG	AK147539|Dlc1|50768|deleted in liver cancer 1	NM_001194941|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr1_-_108656198_108656318	2.18193	UGAAAUG	AK170064|Kdsr|70750|3-ketodihydrosphingosine reductase	AY634684|Kdsr|70750|3-ketodihydrosphingosine reductase	AK018155|Kdsr|70750|3-ketodihydrosphingosine reductase	BC023820|Kdsr|70750|3-ketodihydrosphingosine reductase	NM_027534|Kdsr|70750|3-ketodihydrosphingosine reductase
mm9_v1_chrX_-_133277456_133277461	2.17874	UGAAAUG	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr1_+_33776715_33776982	2.16917	UGAAAUG	AK163909|Rab23|19335|RAB23, member RAS oncogene family	AK047068|Rab23|19335|RAB23, member RAS oncogene family	NM_008999|Rab23|19335|RAB23, member RAS oncogene family	AK164057|Rab23|19335|RAB23, member RAS oncogene family	AK054079|Rab23|19335|RAB23, member RAS oncogene family	AK082017|Rab23|19335|RAB23, member RAS oncogene family	BC025578|Rab23|19335|RAB23, member RAS oncogene family	AK045454|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr4_-_33276711_33276711	2.16014	UGAAAUG	AK145296|Pm20d2|242377|peptidase M20 domain containing 2	NM_001034867|Pm20d2|242377|peptidase M20 domain containing 2
mm9_v1_chr1_+_141318927_141318961	2.15829	UGAAAUG	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chr9_+_53345151_53345154	2.1498	UGAAAUG	AK080294|Npat|244879|nuclear protein in the AT region	NM_001081152|Npat|244879|nuclear protein in the AT region
mm9_v1_chrX_-_101017286_101017329	2.13066	UGAAAUG	AF045692|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2	NM_009197|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm9_v1_chr14_-_100548982_100549014	2.11286	UGAAAUG	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr3_-_146444377_146444386	2.10841	UGAAAUG	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr5_-_145900957_145900965	2.10251	UGAAAUG	AK147170|Pdap1|231887|PDGFA associated protein 1	NM_001033313|Pdap1|231887|PDGFA associated protein 1
mm9_v1_chr13_-_117099629_117099895	2.10194	UGAAAUG	AB104633|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AJ132765|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132609|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK044406|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK090263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK143052|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	NM_021459|Isl1|16392|ISL1 transcription factor, LIM/homeodomain
mm9_v1_chr8_-_23916037_23916141	2.09772	UGAAAUG	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr10_+_84380305_84380360	2.09614	UGAAAUG	BC051080|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	NM_183172|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
mm9_v1_chr1_+_181476534_181476659	2.09053	UGAAAUG	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr11_-_119409041_119409133	2.08923	UGAAAUG	BC139018|Nptx1|18164|neuronal pentraxin 1	BC139020|Nptx1|18164|neuronal pentraxin 1	BC093479|Nptx1|18164|neuronal pentraxin 1	NM_008730|Nptx1|18164|neuronal pentraxin 1
mm9_v1_chr4_+_21774729_21774865	2.07592	UGAAAUG	NM_025669|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC141031|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr7_+_120350963_120350978	2.07274	UGAAAUG	AK146628|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AK147145|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	NM_007489|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like
mm9_v1_chr11_-_28484265_28484323	2.07224	UGAAAUG	AK087049|Ccdc85a|216613|coiled-coil domain containing 85A	AK087070|Ccdc85a|216613|coiled-coil domain containing 85A	AK045568|Ccdc85a|216613|coiled-coil domain containing 85A	NM_001166661|Ccdc85a|216613|coiled-coil domain containing 85A	NM_001166662|Ccdc85a|216613|coiled-coil domain containing 85A	NM_181577|Ccdc85a|216613|coiled-coil domain containing 85A	AK173298|Ccdc85a|216613|coiled-coil domain containing 85A
mm9_v1_chr9_+_4383536_4383536	2.06643	UGAAAUG	AK180204|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	BC014729|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	NM_145609|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene
mm9_v1_chr5_-_149740213_149740268	2.06622	UGAAAUG	NM_153572|Katnal1|231912|katanin p60 subunit A-like 1
mm9_v1_chr14_-_17407701_17408109	2.05537	UGAAAUG	AK078471|Rarb|218772|retinoic acid receptor, beta	NM_011243|Rarb|218772|retinoic acid receptor, beta	S92180|Rarb|218772|retinoic acid receptor, beta	S56660|Rarb|218772|retinoic acid receptor, beta	AK054178|Rarb|218772|retinoic acid receptor, beta	BC076597|Rarb|218772|retinoic acid receptor, beta	X56573|Rarb|218772|retinoic acid receptor, beta
mm9_v1_chr7_-_17200285_17200343	2.03871	UGAAAUG	BC139459|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	BC139461|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147326|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147688|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	NM_172739|Grlf1|232906|glucocorticoid receptor DNA binding factor 1
mm9_v1_chr7_+_5008311_5008341	2.03594	UGAAAUG	NM_146178|Ccdc106|232821|coiled-coil domain containing 106	AB041804|Ccdc106|232821|coiled-coil domain containing 106
mm9_v1_chr12_-_109241423_109241623	2.03313	UGAAAUG	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr2_+_35477498_35477550	2.02881	UGAAAUG	AK147593|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001114124|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chrX_-_133278223_133278228	2.02642	UGAAAUG	AK161610|Morf4l2|56397|mortality factor 4 like 2	AK166637|Morf4l2|56397|mortality factor 4 like 2	NM_001168228|Morf4l2|56397|mortality factor 4 like 2	NM_001168230|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr6_+_38331516_38331524	2.02569	UGAAAUG	AK035185|Ttc26|264134|tetratricopeptide repeat domain 26	BC066060|Ttc26|264134|tetratricopeptide repeat domain 26	NM_153600|Ttc26|264134|tetratricopeptide repeat domain 26	BC031513|Ttc26|264134|tetratricopeptide repeat domain 26	BC066087|Ttc26|264134|tetratricopeptide repeat domain 26
mm9_v1_chr15_+_81702875_81703029	2.00351	UGAAAUG	NM_080633|Aco2|11429|aconitase 2, mitochondrial	AK143917|Aco2|11429|aconitase 2, mitochondrial	AK145511|Aco2|11429|aconitase 2, mitochondrial	AK150027|Aco2|11429|aconitase 2, mitochondrial	AK150954|Aco2|11429|aconitase 2, mitochondrial	AK165411|Aco2|11429|aconitase 2, mitochondrial	BC094462|Aco2|11429|aconitase 2, mitochondrial	AK029122|LOC100504340|100504340|hypothetical protein LOC100504340
mm9_v1_chr12_-_88607158_88607275	2.00121	UGAAAUG	BC016646|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK082261|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK049643|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK079055|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK038165|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK046322|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK145043|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142580|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142581|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK020129|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr3_+_33699111_33699116	1.99673	UGAAAUG	AK031605|Ttc14|67120|tetratricopeptide repeat domain 14	AK134539|Ttc14|67120|tetratricopeptide repeat domain 14	NM_025978|Ttc14|67120|tetratricopeptide repeat domain 14	NM_027619|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chrX_-_12339096_12339247	1.99614	UGAAAUG	AB019028|Med14|26896|mediator complex subunit 14	NM_001048208|Med14|26896|mediator complex subunit 14	NM_012005|Med14|26896|mediator complex subunit 14	BC065072|Med14|26896|mediator complex subunit 14
mm9_v1_chrX_+_69062091_69062188	1.98415	UGAAAUG	NM_001081356|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049488|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK138582|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK011632|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK008848|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK045401|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK164163|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AJ748652|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC094639|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049296|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC028317|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
mm9_v1_chr9_-_16182674_16182674	1.98369	UGAAAUG	NM_001080814|Fat3|270120|FAT tumor suppressor homolog 3 (Drosophila)
mm9_v1_chr2_+_35547418_35547513	1.96533	UGAAAUG	AY305657|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001001602|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr15_+_80004048_80004240	1.96512	UGAAAUG	AK081850|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	NM_010795|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	BC053040|Mgat3|17309|mannoside acetylglucosaminyltransferase 3
mm9_v1_chr7_-_77505248_77505478	1.94878	UGAAAUG	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr6_-_6832067_6832086	1.9424	UGAAAUG	AF072452|Dlx5|13395|distal-less homeobox 5	AF072453|Dlx5|13395|distal-less homeobox 5	NM_010056|Dlx5|13395|distal-less homeobox 5	NM_198854|Dlx5|13395|distal-less homeobox 5	AK158121|Dlx5|13395|distal-less homeobox 5	U67840|Dlx5|13395|distal-less homeobox 5
mm9_v1_chr12_-_21423296_21423379	1.91962	UGAAAUG	BC090838|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	NM_011739|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC110680|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr2_-_35056582_35056639	1.91001	UGAAAUG	AK160859|Rab14|68365|RAB14, member RAS oncogene family	NM_026697|Rab14|68365|RAB14, member RAS oncogene family
mm9_v1_chrX_-_54756877_54756933	1.90083	UGAAAUG	AK138185|Gpr101|245424|G protein-coupled receptor 101	DQ198079|Gpr101|245424|G protein-coupled receptor 101	AK138370|Gpr101|245424|G protein-coupled receptor 101	NM_001033360|Gpr101|245424|G protein-coupled receptor 101
mm9_v1_chr5_+_114550292_114550419	1.88777	UGAAAUG	BC038606|Usp30|100756|ubiquitin specific peptidase 30	AK144578|Usp30|100756|ubiquitin specific peptidase 30	NM_001033202|Usp30|100756|ubiquitin specific peptidase 30
mm9_v1_chr17_+_6138147_6138147	1.88479	UGAAAUG	AK173165|Tulp4|68842|tubby like protein 4	NM_054040|Tulp4|68842|tubby like protein 4
mm9_v1_chr1_+_135142673_135142702	1.87994	UGAAAUG	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr15_-_79518160_79518352	1.87921	UGAAAUG	AK004913|Josd1|74158|Josephin domain containing 1	NM_028792|Josd1|74158|Josephin domain containing 1	AK154799|Josd1|74158|Josephin domain containing 1
mm9_v1_chr17_-_46968361_46968361	1.87852	UGAAAUG	BC151032|BC032203|210982|cDNA sequence BC032203	BC151054|BC032203|210982|cDNA sequence BC032203	NM_001100452|BC032203|210982|cDNA sequence BC032203
mm9_v1_chr1_+_183282758_183282760	1.86907	UGAAAUG	AK013789|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160211|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160212|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_028408|Cnih3|72978|cornichon homolog 3 (Drosophila)	AK033911|Cnih3|72978|cornichon homolog 3 (Drosophila)
mm9_v1_chr13_+_94074449_94074449	1.86527	UGAAAUG	AF093257|Homer1|26556|homer homolog 1 (Drosophila)	NM_011982|Homer1|26556|homer homolog 1 (Drosophila)	NM_147176|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr14_+_12386043_12386066	1.84357	UGAAAUG	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr12_+_110691637_110691748	1.82749	UGAAAUG	AK162458|Dlk1|13386|delta-like 1 homolog (Drosophila)	NM_001190703|Dlk1|13386|delta-like 1 homolog (Drosophila)	NM_001190704|Dlk1|13386|delta-like 1 homolog (Drosophila)	NM_001190705|Dlk1|13386|delta-like 1 homolog (Drosophila)	NM_010052|Dlk1|13386|delta-like 1 homolog (Drosophila)	AK005522|Dlk1|13386|delta-like 1 homolog (Drosophila)	AK164935|Dlk1|13386|delta-like 1 homolog (Drosophila)	L12721|Dlk1|13386|delta-like 1 homolog (Drosophila)	BC052159|Dlk1|13386|delta-like 1 homolog (Drosophila)	U15980|Dlk1|13386|delta-like 1 homolog (Drosophila)	EU434917|Dlk1|13386|delta-like 1 homolog (Drosophila)
mm9_v1_chr11_-_11937330_11937512	1.82559	UGAAAUG	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr19_+_45089665_45089708	1.8231	UGAAAUG	NM_145503|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK169936|Lzts2|226154|leucine zipper, putative tumor suppressor 2	BC092263|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK144154|Lzts2|226154|leucine zipper, putative tumor suppressor 2	NM_001130525|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr13_+_14722494_14722518	1.81979	UGAAAUG	AK169400|AW209491|105351|expressed sequence AW209491	NM_001104646|AW209491|105351|expressed sequence AW209491
mm9_v1_chr10_-_105011439_105011534	1.78356	UGAAAUG	BC092226|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK052344|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK135552|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	NM_177368|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr13_-_64376186_64376295	1.77219	UGAAAUG	BC057357|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	BC049794|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AK161345|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_172587|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr4_-_107973683_107973743	1.76964	UGAAAUG	AK166278|Zyg11b|414872|zyg-ll homolog B (C. elegans)	AK148335|Zyg11b|414872|zyg-ll homolog B (C. elegans)	NM_001033634|Zyg11b|414872|zyg-ll homolog B (C. elegans)
mm9_v1_chr9_-_94438499_94438504	1.74911	UGAAAUG	NM_001033145|1190002N15Rik|68861|RIKEN cDNA 1190002N15 gene
mm9_v1_chr9_-_66643210_66643296	1.74336	UGAAAUG	AK162585|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK049828|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	NM_177583|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK028521|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	BC079659|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK154847|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)
mm9_v1_chr6_+_56664888_56664904	1.73896	UGAAAUG	AK147365|Avl9|78937|AVL9 homolog (S. cerevisiase)	NM_030235|Avl9|78937|AVL9 homolog (S. cerevisiase)
mm9_v1_chr7_+_28043740_28043802	1.73514	UGAAAUG	NM_010950|Numbl|18223|numb-like
mm9_v1_chr5_-_93635416_93635523	1.73244	UGAAAUG	AK177544|Ccni|12453|cyclin I	AK079476|Ccni|12453|cyclin I	AK152614|Ccni|12453|cyclin I	AK050465|Ccni|12453|cyclin I	NM_017367|Ccni|12453|cyclin I
mm9_v1_chr1_+_97210162_97210393	1.72824	UGAAAUG	BC021428|Fam174a|67698|family with sequence similarity 174, member A	AK084861|Fam174a|67698|family with sequence similarity 174, member A	NM_026321|Fam174a|67698|family with sequence similarity 174, member A	AK009797|Fam174a|67698|family with sequence similarity 174, member A	AK017318|Fam174a|67698|family with sequence similarity 174, member A	AK009892|Fam174a|67698|family with sequence similarity 174, member A	AK020633|Fam174a|67698|family with sequence similarity 174, member A	AK148807|Fam174a|67698|family with sequence similarity 174, member A	AK033948|Fam174a|67698|family with sequence similarity 174, member A	AB154249|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr13_+_41345120_41345273	1.719	UGAAAUG	NM_001135577|BC024659|108934|cDNA sequence BC024659	BC066054|BC024659|108934|cDNA sequence BC024659	BC094222|BC024659|108934|cDNA sequence BC024659
mm9_v1_chr8_-_69211936_69211992	1.71319	UGAAAUG	AK045587|Npy5r|18168|neuropeptide Y receptor Y5	BC116976|Npy5r|18168|neuropeptide Y receptor Y5	BC116978|Npy5r|18168|neuropeptide Y receptor Y5	AB001346|Npy5r|18168|neuropeptide Y receptor Y5	NM_016708|Npy5r|18168|neuropeptide Y receptor Y5
mm9_v1_chr9_+_86465577_86465659	1.70896	UGAAAUG	NM_001145969|Rwdd2a|69519|RWD domain containing 2A	AK006533|Rwdd2a|69519|RWD domain containing 2A	BC115691|Rwdd2a|69519|RWD domain containing 2A	BC115692|Rwdd2a|69519|RWD domain containing 2A	NM_001145968|Rwdd2a|69519|RWD domain containing 2A	NM_027100|Rwdd2a|69519|RWD domain containing 2A
mm9_v1_chr2_+_144419797_144419818	1.7013	UGAAAUG	AK002610|Gm561|228715|predicted gene 561	NM_001033297|Gm561|228715|predicted gene 561	BC147042|Gm561|228715|predicted gene 561	BC147043|Gm561|228715|predicted gene 561	AK010324|Gm561|228715|predicted gene 561
mm9_v1_chr3_-_36512237_36512327	1.67893	UGAAAUG	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr9_-_99258896_99258975	1.67089	UGAAAUG	BC118967|Esyt3|272636|extended synaptotagmin-like protein 3	AK220532|Esyt3|272636|extended synaptotagmin-like protein 3	AK086367|Esyt3|272636|extended synaptotagmin-like protein 3	NM_177775|Esyt3|272636|extended synaptotagmin-like protein 3	AK142948|Esyt3|272636|extended synaptotagmin-like protein 3
mm9_v1_chr17_+_13897509_13897625	1.66933	UGAAAUG	NM_010806|Mllt4|17356|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	AF172447|Mllt4|17356|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	AK166398|Mllt4|17356|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
mm9_v1_chr1_+_33777252_33777263	1.66674	UGAAAUG	AK016493|Rab23|19335|RAB23, member RAS oncogene family	NM_001159729|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr4_+_57580989_57581153	1.66262	UGAAAUG	AK045344|Palm2|242481|paralemmin 2	NM_172868|Palm2|242481|paralemmin 2	BC113156|Palm2|242481|paralemmin 2
mm9_v1_chrX_+_65931715_65931923	1.65761	UGAAAUG	AK053829|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	BC079671|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	NM_008031|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK140343|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK046605|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK053701|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080898|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080948|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	L23971|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr9_-_45792865_45792953	1.64694	UGAAAUG	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr10_+_84380371_84380454	1.64608	UGAAAUG	AY940666|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	AY940667|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	NM_001013441|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	AK132369|Ric8b|237422|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
mm9_v1_chr10_+_18189773_18189786	1.63822	UGAAAUG	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr5_+_12383165_12383165	1.62806	UGAAAUG	AK052671|Sema3d|108151|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	NM_028882|Sema3d|108151|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm9_v1_chr2_-_139892477_139892545	1.62525	UGAAAUG	AK036512|Tasp1|75812|taspase, threonine aspartase 1	NM_175225|Tasp1|75812|taspase, threonine aspartase 1	AK160983|Tasp1|75812|taspase, threonine aspartase 1	NM_001159640|Tasp1|75812|taspase, threonine aspartase 1	NM_001159641|Tasp1|75812|taspase, threonine aspartase 1	AK146320|Tasp1|75812|taspase, threonine aspartase 1	AK132709|Tasp1|75812|taspase, threonine aspartase 1	BC024597|Tasp1|75812|taspase, threonine aspartase 1	AK015624|Tasp1|75812|taspase, threonine aspartase 1
mm9_v1_chr3_+_14533787_14533872	1.62487	UGAAAUG	AK004646|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163579|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163580|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_028915|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138734|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138735|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC099680|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC061202|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK030355|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK016559|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK173256|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK029563|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1
mm9_v1_chr5_-_76733540_76733585	1.6232	UGAAAUG	AF000998|Clock|12753|circadian locomotor output cycles kaput	NM_007715|Clock|12753|circadian locomotor output cycles kaput
mm9_v1_chr11_-_101949793_101949840	1.62267	UGAAAUG	AK172253|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AF162685|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AK161577|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	BC053026|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	NM_016695|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm9_v1_chr15_-_48623520_48623540	1.60247	UGAAAUG	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr16_-_38713106_38713149	1.5697	UGAAAUG	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr18_-_62071451_62071482	1.55177	UGAAAUG	BC094229|Ablim3|319713|actin binding LIM protein family, member 3	AK082380|Ablim3|319713|actin binding LIM protein family, member 3	BC060275|Ablim3|319713|actin binding LIM protein family, member 3	NM_198649|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr5_-_28793627_28793640	1.54787	UGAAAUG	BC063087|Shh|20423|sonic hedgehog	AK077688|Shh|20423|sonic hedgehog	NM_009170|Shh|20423|sonic hedgehog
mm9_v1_chr5_-_24606422_24606505	1.5454	UGAAAUG	AK154296|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_145401|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr1_+_129999868_129999934	1.5373	UGAAAUG	AK144098|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	NM_181750|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK141150|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	BC049181|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK051765|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)
mm9_v1_chr13_+_81850415_81850532	1.5255	UGAAAUG	AK046032|Mblac2|72852|metallo-beta-lactamase domain containing 2	NM_028372|Mblac2|72852|metallo-beta-lactamase domain containing 2	AK013594|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107207|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC114401|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107206|Mblac2|72852|metallo-beta-lactamase domain containing 2
mm9_v1_chrX_-_34442878_34442893	1.52085	UGAAAUG	AK042690|Nkrf|77286|NF-kappaB repressing factor	NM_029891|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr13_+_91600662_91600791	1.51138	UGAAAUG	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr11_-_87639611_87639615	1.49949	UGAAAUG	BC016212|Lpo|76113|lactoperoxidase	NM_080420|Lpo|76113|lactoperoxidase
mm9_v1_chr1_+_154246959_154247050	1.49859	UGAAAUG	AK085716|Glt25d2|269132|glycosyltransferase 25 domain containing 2	AK052838|Glt25d2|269132|glycosyltransferase 25 domain containing 2	NM_177756|Glt25d2|269132|glycosyltransferase 25 domain containing 2	AK134084|Glt25d2|269132|glycosyltransferase 25 domain containing 2	BC068118|Glt25d2|269132|glycosyltransferase 25 domain containing 2
mm9_v1_chr1_-_176851949_176851953	1.48964	UGAAAUG	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr16_+_96502595_96502638	1.48814	UGAAAUG	BC057887|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_033149|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr6_+_17256369_17256377	1.47848	UGAAAUG	AB029929|Cav1|12389|caveolin 1, caveolae protein	NM_007616|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr13_+_14722520_14722529	1.47212	UGAAAUG	AK167401|AW209491|105351|expressed sequence AW209491	NM_134067|AW209491|105351|expressed sequence AW209491
mm9_v1_chr2_+_25733302_25733389	1.46479	UGAAAUG	BC141190|Kcnt1|227632|potassium channel, subfamily T, member 1	BC171963|Kcnt1|227632|potassium channel, subfamily T, member 1	AK086119|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_175462|Kcnt1|227632|potassium channel, subfamily T, member 1	AK147625|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr13_-_34437042_34437162	1.46448	UGAAAUG	AK147397|Slc22a23|73102|solute carrier family 22, member 23	NM_001033167|Slc22a23|73102|solute carrier family 22, member 23
mm9_v1_chr16_+_96457407_96457407	1.44634	UGAAAUG	BC047347|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	BC051669|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_001122993|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr17_+_53618542_53618596	1.44185	UGAAAUG	AK081999|Rab5a|271457|RAB5A, member RAS oncogene family	NM_025887|Rab5a|271457|RAB5A, member RAS oncogene family	AK076093|Rab5a|271457|RAB5A, member RAS oncogene family	BC096481|Rab5a|271457|RAB5A, member RAS oncogene family
mm9_v1_chr3_-_122322556_122322614	1.44166	UGAAAUG	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr13_+_90229271_90229367	1.43561	UGAAAUG	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr11_-_83943060_83943140	1.43258	UGAAAUG	AK157938|Tada2a|217031|transcriptional adaptor 2A	BC038821|Tada2a|217031|transcriptional adaptor 2A	NM_172562|Tada2a|217031|transcriptional adaptor 2A	AK142262|Tada2a|217031|transcriptional adaptor 2A
mm9_v1_chr19_+_34658016_34658052	1.42995	UGAAAUG	AK153226|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	NM_010501|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK077459|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK151032|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC089563|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	L32974|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC003804|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3
mm9_v1_chr7_+_16683891_16684052	1.42606	UGAAAUG	AK050623|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK171998|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	BC004804|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK013895|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK004826|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK005372|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK136689|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	NM_025898|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha
mm9_v1_chr15_-_82210591_82210704	1.39257	UGAAAUG	BC016256|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	AK086555|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	BC006853|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_001163472|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_019823|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22
mm9_v1_chr11_+_86922732_86922770	1.39186	UGAAAUG	BC117001|Fam33a|66140|family with sequence similarity 33, member A	BC119167|Fam33a|66140|family with sequence similarity 33, member A	AK003196|Fam33a|66140|family with sequence similarity 33, member A	AK153219|Fam33a|66140|family with sequence similarity 33, member A	BC060088|Fam33a|66140|family with sequence similarity 33, member A	BC052151|Fam33a|66140|family with sequence similarity 33, member A	BC096627|Fam33a|66140|family with sequence similarity 33, member A	AK013317|Fam33a|66140|family with sequence similarity 33, member A	AK013370|Fam33a|66140|family with sequence similarity 33, member A	AK017811|Fam33a|66140|family with sequence similarity 33, member A	NM_025377|Fam33a|66140|family with sequence similarity 33, member A	AK162628|Fam33a|66140|family with sequence similarity 33, member A
mm9_v1_chr1_-_9738415_9738520	1.37899	UGAAAUG	BC006059|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1	AK030104|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1	AK122563|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1	BC059209|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1	NM_173443|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1	AK144688|Vcpip1|70675|valosin containing protein (p97)/p47 complex interacting protein 1
mm9_v1_chr9_+_81757308_81757350	1.37584	UGAAAUG	BC096613|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK082395|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK166209|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK043929|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	NM_175213|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)
mm9_v1_chr17_-_79135885_79135936	1.37271	UGAAAUG	BC090968|Strn|268980|striatin, calmodulin binding protein	NM_011500|Strn|268980|striatin, calmodulin binding protein	AK051549|Strn|268980|striatin, calmodulin binding protein
mm9_v1_chr11_+_34214821_34214821	1.36059	UGAAAUG	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr7_-_36539369_36539472	1.35624	UGAAAUG	BC059897|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK045758|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031722|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	BC050065|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK033395|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AF538322|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031345|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK034217|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	NM_178704|Dpy19l3|233115|dpy-19-like 3 (C. elegans)
mm9_v1_chr6_-_97129076_97129149	1.34746	UGAAAUG	AK144898|Tmf1|232286|TATA element modulatory factor 1	AK144729|Tmf1|232286|TATA element modulatory factor 1	BC150931|Tmf1|232286|TATA element modulatory factor 1	NM_001081111|Tmf1|232286|TATA element modulatory factor 1
mm9_v1_chrX_-_110299092_110299131	1.34707	UGAAAUG	BC047461|Chm|12662|choroidermia	AK035956|Chm|12662|choroidermia	AK141830|Chm|12662|choroidermia	AF218084|Chm|12662|choroidermia	NM_018818|Chm|12662|choroidermia	AK021238|Chm|12662|choroidermia
mm9_v1_chr11_-_97914582_97914775	1.33714	UGAAAUG	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr12_-_47919695_47919761	1.33533	UGAAAUG	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr18_-_62071494_62071513	1.32701	UGAAAUG	NM_001164491|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr18_-_25327336_25327448	1.3245	UGAAAUG	NM_001004361|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene	NM_001142698|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene
mm9_v1_chr5_-_31456576_31456630	1.30716	UGAAAUG	BC013452|Mpv17|17527|MpV17 mitochondrial inner membrane protein	AK040477|Mpv17|17527|MpV17 mitochondrial inner membrane protein	M36411|Mpv17|17527|MpV17 mitochondrial inner membrane protein	NM_008622|Mpv17|17527|MpV17 mitochondrial inner membrane protein
mm9_v1_chr11_+_60591019_60591051	1.30156	UGAAAUG	NM_001085440|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	NM_175491|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK052754|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK164045|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK145010|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK083739|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm9_v1_chr1_-_82583400_82583423	1.29348	UGAAAUG	AK164732|Col4a4|12829|collagen, type IV, alpha 4	NM_007735|Col4a4|12829|collagen, type IV, alpha 4
mm9_v1_chr3_-_146433544_146433656	1.28521	UGAAAUG	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr12_+_74040868_74041042	1.28517	UGAAAUG	AK017544|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AF135267|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AF050130|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AK029309|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	NM_011384|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	BC138838|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	BC138839|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)	AJ011787|Six6|20476|sine oculis-related homeobox 6 homolog (Drosophila)
mm9_v1_chr2_+_35413977_35414092	1.27873	UGAAAUG	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr16_-_89974943_89974943	1.27378	UGAAAUG	AK147392|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145886|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr12_+_37040755_37040991	1.27271	UGAAAUG	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr19_+_23215704_23215723	1.26146	UGAAAUG	AK028544|Klf9|16601|Kruppel-like factor 9	NM_010638|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr19_-_31839462_31839522	1.24239	UGAAAUG	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chrX_+_137212566_137212566	1.2421	UGAAAUG	AF196480|Mid2|23947|midline 2	NM_011845|Mid2|23947|midline 2
mm9_v1_chr8_-_38001686_38001686	1.23917	UGAAAUG	HM008381|Dlc1|50768|deleted in liver cancer 1	NM_001194940|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr5_-_88128419_88128445	1.23283	UGAAAUG	BC019114|Csn2|12991|casein beta	BC013332|Csn2|12991|casein beta	BC092098|Csn2|12991|casein beta	BC020356|Csn2|12991|casein beta	BC050270|Csn2|12991|casein beta	BC020383|Csn2|12991|casein beta	BC021153|Csn2|12991|casein beta	BC057671|Csn2|12991|casein beta	BC080709|Csn2|12991|casein beta	AK164792|Csn2|12991|casein beta	AK164793|Csn2|12991|casein beta	AK085729|Csn2|12991|casein beta	AK021324|Csn2|12991|casein beta	AK021328|Csn2|12991|casein beta	AK052803|Csn2|12991|casein beta	AK052805|Csn2|12991|casein beta	AK052822|Csn2|12991|casein beta	AK085678|Csn2|12991|casein beta	AK085694|Csn2|12991|casein beta	AK085698|Csn2|12991|casein beta	AK085756|Csn2|12991|casein beta	AK142616|Csn2|12991|casein beta	AK142620|Csn2|12991|casein beta	AK142631|Csn2|12991|casein beta	AK142635|Csn2|12991|casein beta	AK164747|Csn2|12991|casein beta	AK164761|Csn2|12991|casein beta	AK164791|Csn2|12991|casein beta	AK164794|Csn2|12991|casein beta	NM_009972|Csn2|12991|casein beta	X04490|Csn2|12991|casein beta
mm9_v1_chr4_-_155366696_155366786	1.22343	UGAAAUG	AK033608|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AK090344|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AY050569|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	BC082998|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	BC057933|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AK078083|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	NM_080445|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6
mm9_v1_chr16_-_16359122_16359124	1.20804	UGAAAUG	NM_001025947|Dnm1l|74006|dynamin 1-like	NM_152816|Dnm1l|74006|dynamin 1-like
mm9_v1_chrX_-_141921588_141921636	1.20794	UGAAAUG	AF461135|Amot|27494|angiomotin	NM_153319|Amot|27494|angiomotin	BC057638|Amot|27494|angiomotin
mm9_v1_chr15_+_3220766_3220979	1.20766	UGAAAUG	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr1_+_145587576_145587576	1.20341	UGAAAUG	AK142654|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_001038594|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr9_-_59598416_59598455	1.20185	UGAAAUG	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chr9_-_122775060_122775123	1.20074	UGAAAUG	BC099930|Zfp445|235682|zinc finger protein 445	NM_173364|Zfp445|235682|zinc finger protein 445
mm9_v1_chr11_-_3763899_3763908	1.18636	UGAAAUG	AK049816|Osbp2|74309|oxysterol binding protein 2	NM_152818|Osbp2|74309|oxysterol binding protein 2
mm9_v1_chr2_-_34227309_34227557	1.18515	UGAAAUG	AK052017|Pbx3|18516|pre B-cell leukemia transcription factor 3	BC057879|Pbx3|18516|pre B-cell leukemia transcription factor 3	AK144363|Pbx3|18516|pre B-cell leukemia transcription factor 3	AF020199|Pbx3|18516|pre B-cell leukemia transcription factor 3	NM_016768|Pbx3|18516|pre B-cell leukemia transcription factor 3	AF020200|Pbx3|18516|pre B-cell leukemia transcription factor 3
mm9_v1_chr5_-_108304062_108304125	1.1795	UGAAAUG	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr19_-_47766512_47766583	1.17643	UGAAAUG	BC125031|Col17a1|12821|collagen, type XVII, alpha 1	BC125032|Col17a1|12821|collagen, type XVII, alpha 1	NM_007732|Col17a1|12821|collagen, type XVII, alpha 1	L08407|Col17a1|12821|collagen, type XVII, alpha 1
mm9_v1_chr14_+_21514178_21514220	1.15989	UGAAAUG	NM_028428|Fut11|73068|fucosyltransferase 11	AJ542393|Fut11|73068|fucosyltransferase 11	AK029717|Fut11|73068|fucosyltransferase 11	AK030310|Fut11|73068|fucosyltransferase 11	AK046461|Fut11|73068|fucosyltransferase 11	BC138555|Fut11|73068|fucosyltransferase 11	BC145735|Fut11|73068|fucosyltransferase 11	AK032390|Fut11|73068|fucosyltransferase 11	AK014029|Fut11|73068|fucosyltransferase 11
mm9_v1_chr6_+_54553140_54553140	1.1438	UGAAAUG	BC052360|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001001335|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr2_-_150865063_150865140	1.13906	UGAAAUG	AK164971|Nanp|67311|N-acetylneuraminic acid phosphatase	BC018527|Nanp|67311|N-acetylneuraminic acid phosphatase	AK005566|Nanp|67311|N-acetylneuraminic acid phosphatase	AK021344|Nanp|67311|N-acetylneuraminic acid phosphatase	BC083086|Nanp|67311|N-acetylneuraminic acid phosphatase	NM_026086|Nanp|67311|N-acetylneuraminic acid phosphatase
mm9_v1_chr2_-_165151935_165152001	1.13192	UGAAAUG	AK047040|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK050823|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK053574|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK032033|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	BC023954|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK038097|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK045428|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK129023|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	NM_080287|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	NM_207706|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)
mm9_v1_chr11_-_77303157_77303183	1.12755	UGAAAUG	BC151158|Ankrd13b|268445|ankyrin repeat domain 13b	BC172028|Ankrd13b|268445|ankyrin repeat domain 13b	NM_172945|Ankrd13b|268445|ankyrin repeat domain 13b
mm9_v1_chr1_+_39251056_39251116	1.12102	UGAAAUG	U77969|Npas2|18143|neuronal PAS domain protein 2	BC109166|Npas2|18143|neuronal PAS domain protein 2	NM_008719|Npas2|18143|neuronal PAS domain protein 2
mm9_v1_chr5_-_139060952_139060970	1.11953	UGAAAUG	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr16_+_96366980_96367038	1.11952	UGAAAUG	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr7_+_37483093_37483136	1.11769	UGAAAUG	AY063491|Tshz3|243931|teashirt zinc finger family member 3	NM_172298|Tshz3|243931|teashirt zinc finger family member 3
mm9_v1_chr16_+_38742365_38742408	1.11687	UGAAAUG	AK050005|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	NM_019804|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK052013|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK053603|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK085368|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC031115|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF142672|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF158746|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK045602|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK018658|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC013492|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr6_+_83187368_83187368	1.1164	UGAAAUG	NM_001166067|Slc4a5|232156|solute carrier family 4, sodium bicarbonate cotransporter, member 5
mm9_v1_chr3_+_103083215_103083215	1.10634	UGAAAUG	AY458590|Trim33|94093|tripartite motif-containing 33	NM_001079830|Trim33|94093|tripartite motif-containing 33	NM_053170|Trim33|94093|tripartite motif-containing 33
mm9_v1_chr5_+_67651890_67652024	1.10421	UGAAAUG	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chr6_+_57652448_57652452	1.10292	UGAAAUG	NM_133737|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr7_-_77511607_77511666	1.10266	UGAAAUG	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr1_+_159456274_159456300	1.09659	UGAAAUG	AK132144|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	AB063356|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	NM_001159986|Sec16b|89867|SEC16 homolog B (S. cerevisiae)
mm9_v1_chr1_+_168309297_168309436	1.09153	UGAAAUG	NM_030245|Tada1|27878|transcriptional adaptor 1	BC027337|Tada1|27878|transcriptional adaptor 1	AK151132|Tada1|27878|transcriptional adaptor 1
mm9_v1_chr6_-_35489875_35489887	1.0835	UGAAAUG	NM_008098|Mtpn|14489|myotrophin
mm9_v1_chr10_-_8238569_8238650	1.07063	UGAAAUG	AK086181|Ust|338362|uronyl-2-sulfotransferase	AK147850|Ust|338362|uronyl-2-sulfotransferase	NM_177387|Ust|338362|uronyl-2-sulfotransferase
mm9_v1_chr17_-_32925218_32925259	1.06705	UGAAAUG	AK029041|Zfp871|208292|zinc finger protein 871	NM_172458|Zfp871|208292|zinc finger protein 871
mm9_v1_chr10_-_75106702_75106752	1.05739	UGAAAUG	AK037127|Susd2|71733|sushi domain containing 2	BC026837|Susd2|71733|sushi domain containing 2	AK004703|Susd2|71733|sushi domain containing 2	AK033823|Susd2|71733|sushi domain containing 2	AK128959|Susd2|71733|sushi domain containing 2	AK028817|Susd2|71733|sushi domain containing 2	AK037059|Susd2|71733|sushi domain containing 2	AK042469|Susd2|71733|sushi domain containing 2	AK038944|Susd2|71733|sushi domain containing 2	AK167155|Susd2|71733|sushi domain containing 2	NM_001162913|Susd2|71733|sushi domain containing 2	NM_027890|Susd2|71733|sushi domain containing 2
mm9_v1_chr4_-_126645129_126645179	1.05595	UGAAAUG	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr14_-_34260323_34260352	1.05423	UGAAAUG	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr15_+_44027680_44027795	1.05031	UGAAAUG	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr2_+_21127350_21127413	1.04869	UGAAAUG	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr6_+_17231334_17231388	1.04293	UGAAAUG	BC023095|Cav2|12390|caveolin 2	NM_016900|Cav2|12390|caveolin 2	AK009913|Cav2|12390|caveolin 2
mm9_v1_chr5_+_58109246_58109263	1.04273	UGAAAUG	NM_001122758|Pcdh7|54216|protocadherin 7	NM_018764|Pcdh7|54216|protocadherin 7
mm9_v1_chr19_+_34682418_34682459	0.990292	UGAAAUG	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chrX_+_46823626_46823742	0.977602	UGAAAUG	NM_001081123|Arhgap36|75404|Rho GTPase activating protein 36	BC145645|Arhgap36|75404|Rho GTPase activating protein 36	AK048167|Arhgap36|75404|Rho GTPase activating protein 36
mm9_v1_chr10_-_94878117_94878117	0.975499	UGAAAUG	NM_001168656|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr18_-_68459958_68459986	0.974395	UGAAAUG	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr17_+_42452895_42453084	0.969695	UGAAAUG	NM_028474|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	AK014270|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	BC145294|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene
mm9_v1_chr2_-_170253324_170253344	0.968749	UGAAAUG	BC113166|Bcas1|76960|breast carcinoma amplified sequence 1	BC113957|Bcas1|76960|breast carcinoma amplified sequence 1	AY219233|Bcas1|76960|breast carcinoma amplified sequence 1	AK020254|Bcas1|76960|breast carcinoma amplified sequence 1	NM_001164369|Bcas1|76960|breast carcinoma amplified sequence 1	NM_029815|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr2_-_28321788_28321851	0.962548	UGAAAUG	AY927869|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	BC048581|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	BC099566|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	NM_027040|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	AK005731|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene
mm9_v1_chr10_-_94879435_94879509	0.958058	UGAAAUG	AK160537|Socs2|216233|suppressor of cytokine signaling 2	AK162591|Socs2|216233|suppressor of cytokine signaling 2	BC106153|Socs2|216233|suppressor of cytokine signaling 2	NM_007706|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr5_-_102498929_102498975	0.957494	UGAAAUG	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr7_-_39012977_39013015	0.949194	UGAAAUG	BC002120|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1	AK143976|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1	AK157990|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1	AK171398|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1	AK170283|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1	NM_024413|Plekhf1|72287|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm9_v1_chr16_-_84835812_84835914	0.947939	UGAAAUG	BC010766|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F	NM_016755|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr1_-_52290058_52290076	0.947736	UGAAAUG	AK173039|Gls|14660|glutaminase	NM_001081081|Gls|14660|glutaminase	NM_001113383|Gls|14660|glutaminase
mm9_v1_chr3_-_107499460_107499466	0.947204	UGAAAUG	NM_145542|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr9_+_113721698_113721717	0.935816	UGAAAUG	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr17_+_71553920_71554003	0.93414	UGAAAUG	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chr6_+_55967502_55967523	0.928454	UGAAAUG	BC026822|Gsbs|19051|G substrate	NM_011153|Gsbs|19051|G substrate	AF071562|Gsbs|19051|G substrate
mm9_v1_chr12_+_16901671_16901783	0.925034	UGAAAUG	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr9_-_22193627_22193649	0.923437	UGAAAUG	NM_028390|Anln|68743|anillin, actin binding protein
mm9_v1_chr17_+_45660382_45660475	0.9194	UGAAAUG	NM_013688|Tcte1|21645|t-complex-associated testis expressed 1
mm9_v1_chrX_+_156828621_156828656	0.917621	UGAAAUG	NM_001079847|Gpr64|237175|G protein-coupled receptor 64	NM_001079848|Gpr64|237175|G protein-coupled receptor 64	NM_001079857|Gpr64|237175|G protein-coupled receptor 64	NM_178712|Gpr64|237175|G protein-coupled receptor 64	AK046871|Gpr64|237175|G protein-coupled receptor 64	AF538952|Gpr64|237175|G protein-coupled receptor 64	AF538955|Gpr64|237175|G protein-coupled receptor 64	AF538956|Gpr64|237175|G protein-coupled receptor 64	AF538957|Gpr64|237175|G protein-coupled receptor 64
mm9_v1_chr1_-_136229504_136229504	0.91444	UGAAAUG	EU568872|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	NM_001144855|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm9_v1_chr9_-_90009416_90009657	0.911232	UGAAAUG	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr16_+_92058498_92058582	0.907698	UGAAAUG	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr15_-_89026839_89026926	0.897683	UGAAAUG	BC030395|Fam116b|69440|family with sequence similarity 116, member B	BC139003|Fam116b|69440|family with sequence similarity 116, member B	AK084555|Fam116b|69440|family with sequence similarity 116, member B	NM_027081|Fam116b|69440|family with sequence similarity 116, member B	AK154949|Fam116b|69440|family with sequence similarity 116, member B
mm9_v1_chr11_-_23533564_23533665	0.88713	UGAAAUG	AK129454|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC055049|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC079876|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC072622|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	AK053838|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	NM_027860|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene
mm9_v1_chr9_-_53475610_53475616	0.884208	UGAAAUG	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr4_+_3502021_3502156	0.881084	UGAAAUG	BC058183|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK044895|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	NM_054089|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK030953|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	BC075728|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK050044|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK170949|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AF389908|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)
mm9_v1_chr2_-_125608472_125608605	0.879151	UGAAAUG	BC095939|Secisbp2l|70354|SECIS binding protein 2-like	AK145135|Secisbp2l|70354|SECIS binding protein 2-like	AK169713|Secisbp2l|70354|SECIS binding protein 2-like	BC141056|Secisbp2l|70354|SECIS binding protein 2-like	AK049924|Secisbp2l|70354|SECIS binding protein 2-like	NM_177608|Secisbp2l|70354|SECIS binding protein 2-like
mm9_v1_chr10_-_94877824_94877916	0.878945	UGAAAUG	U88327|Socs2|216233|suppressor of cytokine signaling 2	NM_001168657|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr17_+_21145866_21145967	0.866375	UGAAAUG	AK161712|Zfp160|224585|zinc finger protein 160	AK162583|Zfp160|224585|zinc finger protein 160	AK143313|Zfp160|224585|zinc finger protein 160	NM_145483|Zfp160|224585|zinc finger protein 160	BC015291|Zfp160|224585|zinc finger protein 160
mm9_v1_chr4_-_44096969_44097048	0.862347	UGAAAUG	AM697710|Gne|50798|glucosamine	BC015277|Gne|50798|glucosamine	BC051254|Gne|50798|glucosamine	AK136573|Gne|50798|glucosamine	NM_015828|Gne|50798|glucosamine
mm9_v1_chr8_-_11312729_11312825	0.844956	UGAAAUG	J04694|Col4a1|12826|collagen, type IV, alpha 1	AK142097|Col4a1|12826|collagen, type IV, alpha 1	J03758|Col4a1|12826|collagen, type IV, alpha 1	AK147284|Col4a1|12826|collagen, type IV, alpha 1	AK147355|Col4a1|12826|collagen, type IV, alpha 1	X06777|Col4a1|12826|collagen, type IV, alpha 1	AK146487|Col4a1|12826|collagen, type IV, alpha 1	AK159130|Col4a1|12826|collagen, type IV, alpha 1	AK147661|Col4a1|12826|collagen, type IV, alpha 1	NM_009931|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr2_-_7002344_7002370	0.843377	UGAAAUG	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chrX_+_35669345_35669443	0.83077	UGAAAUG	BC137923|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	BC137924|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AK053500|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348324|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348325|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	NM_133690|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr12_-_99816091_99816149	0.827529	UGAAAUG	BC132487|Kcnk10|72258|potassium channel, subfamily K, member 10	BC137869|Kcnk10|72258|potassium channel, subfamily K, member 10	AK082153|Kcnk10|72258|potassium channel, subfamily K, member 10	NM_029911|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr3_+_30894668_30894897	0.818308	UGAAAUG	AK220517|Prkci|18759|protein kinase C, iota	AK144979|Prkci|18759|protein kinase C, iota	NM_008857|Prkci|18759|protein kinase C, iota	AK147710|Prkci|18759|protein kinase C, iota	AK167411|Prkci|18759|protein kinase C, iota	BC021630|Prkci|18759|protein kinase C, iota	D28577|Prkci|18759|protein kinase C, iota
mm9_v1_chr16_+_26581790_26581827	0.807089	UGAAAUG	NM_001159317|Il1rap|16180|interleukin 1 receptor accessory protein	NM_001159318|Il1rap|16180|interleukin 1 receptor accessory protein	NM_008364|Il1rap|16180|interleukin 1 receptor accessory protein	NM_134103|Il1rap|16180|interleukin 1 receptor accessory protein	AK083209|Il1rap|16180|interleukin 1 receptor accessory protein	AK034269|Il1rap|16180|interleukin 1 receptor accessory protein
mm9_v1_chr15_-_6824238_6824366	0.806048	UGAAAUG	AK040020|Osmr|18414|oncostatin M receptor	AK087179|Osmr|18414|oncostatin M receptor	AF058805|Osmr|18414|oncostatin M receptor	NM_011019|Osmr|18414|oncostatin M receptor
mm9_v1_chr4_-_116228531_116228547	0.798131	UGAAAUG	AK041960|Tmem69|230657|transmembrane protein 69	BC106178|Tmem69|230657|transmembrane protein 69	NM_177670|Tmem69|230657|transmembrane protein 69
mm9_v1_chr5_-_144031666_144031702	0.794717	UGAAAUG	NM_017467|Zfp316|54201|zinc finger protein 316
mm9_v1_chr2_+_54288789_54288827	0.794605	UGAAAUG	AK035964|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK030726|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK038387|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK045417|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	NM_173030|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
mm9_v1_chr14_-_27783615_27783757	0.793647	UGAAAUG	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr5_-_68238654_68238670	0.793213	UGAAAUG	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr11_-_88579517_88579542	0.786558	UGAAAUG	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr6_-_34126949_34127110	0.77349	UGAAAUG	AK042150|Slc35b4|58246|solute carrier family 35, member B4	AK029046|Slc35b4|58246|solute carrier family 35, member B4	BC033512|Slc35b4|58246|solute carrier family 35, member B4	AK033913|Slc35b4|58246|solute carrier family 35, member B4	BC016275|Slc35b4|58246|solute carrier family 35, member B4	AK045791|Slc35b4|58246|solute carrier family 35, member B4	AK138591|Slc35b4|58246|solute carrier family 35, member B4	AB041549|Slc35b4|58246|solute carrier family 35, member B4	NM_021435|Slc35b4|58246|solute carrier family 35, member B4	AK029969|Slc35b4|58246|solute carrier family 35, member B4
mm9_v1_chr6_-_42274556_42274690	0.761605	UGAAAUG	AK163654|Fam131b|76156|family with sequence similarity 131, member B	AK047763|Fam131b|76156|family with sequence similarity 131, member B	AK018206|Fam131b|76156|family with sequence similarity 131, member B	AK018325|Fam131b|76156|family with sequence similarity 131, member B	AK158869|Fam131b|76156|family with sequence similarity 131, member B	NM_001113327|Fam131b|76156|family with sequence similarity 131, member B	NM_029528|Fam131b|76156|family with sequence similarity 131, member B
mm9_v1_chr16_+_32877857_32877985	0.736343	UGAAAUG	NM_001159349|Fyttd1|69823|forty-two-three domain containing 1	NM_027226|Fyttd1|69823|forty-two-three domain containing 1	AK139638|Fyttd1|69823|forty-two-three domain containing 1	AK161252|Fyttd1|69823|forty-two-three domain containing 1	AK008130|Fyttd1|69823|forty-two-three domain containing 1	AK050479|Fyttd1|69823|forty-two-three domain containing 1	AK157602|Fyttd1|69823|forty-two-three domain containing 1	AK166032|Fyttd1|69823|forty-two-three domain containing 1	AK170511|Fyttd1|69823|forty-two-three domain containing 1	AK014447|Fyttd1|69823|forty-two-three domain containing 1	BC010204|Fyttd1|69823|forty-two-three domain containing 1	AK050448|Fyttd1|69823|forty-two-three domain containing 1	AK165633|Fyttd1|69823|forty-two-three domain containing 1	BC028253|Fyttd1|69823|forty-two-three domain containing 1	AK029785|Fyttd1|69823|forty-two-three domain containing 1	AJ344096|Fyttd1|69823|forty-two-three domain containing 1
mm9_v1_chr4_+_136025675_136025745	0.732514	UGAAAUG	AK139583|Luzp1|269593|leucine zipper protein 1	NM_024452|Luzp1|269593|leucine zipper protein 1	AK012514|Luzp1|269593|leucine zipper protein 1	BC026746|Luzp1|269593|leucine zipper protein 1
mm9_v1_chr2_+_163428044_163428072	0.729645	UGAAAUG	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr16_+_14705932_14706066	0.728153	UGAAAUG	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr11_+_102977638_102977680	0.725376	UGAAAUG	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr6_-_136752898_136752939	0.724577	UGAAAUG	BC111813|Hist4h4|320332|histone cluster 4, H4	NM_175652|Hist4h4|320332|histone cluster 4, H4	AK045187|Hist4h4|320332|histone cluster 4, H4
mm9_v1_chr18_+_22503589_22503589	0.723312	UGAAAUG	AK082659|Asxl3|211961|additional sex combs like 3 (Drosophila)	NM_001167777|Asxl3|211961|additional sex combs like 3 (Drosophila)
mm9_v1_chr3_+_68673489_68673528	0.716768	UGAAAUG	NM_001167996|1110032F04Rik|68725|RIKEN cDNA 1110032F04 gene
mm9_v1_chr14_+_21871781_21871860	0.707234	UGAAAUG	AK009508|Adk|11534|adenosine kinase	AK157662|Adk|11534|adenosine kinase	AK028100|Adk|11534|adenosine kinase	AK139200|Adk|11534|adenosine kinase	AK032871|Adk|11534|adenosine kinase	BC009659|Adk|11534|adenosine kinase	NM_134079|Adk|11534|adenosine kinase	AY540996|Adk|11534|adenosine kinase
mm9_v1_chr6_+_11875859_11875888	0.690839	UGAAAUG	AK016517|Phf14|75725|PHD finger protein 14	NM_001168382|Phf14|75725|PHD finger protein 14	NM_029404|Phf14|75725|PHD finger protein 14
mm9_v1_chr5_-_89105135_89105221	0.6897	UGAAAUG	AK045986|Grsf1|231413|G-rich RNA sequence binding factor 1	AK044889|Grsf1|231413|G-rich RNA sequence binding factor 1	AK077782|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_178700|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr6_+_54545104_54545338	0.689573	UGAAAUG	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr13_-_67370003_67370074	0.68374	UGAAAUG	BC062958|Zfp458|238690|zinc finger protein 458	NM_001001152|Zfp458|238690|zinc finger protein 458
mm9_v1_chr1_+_107560433_107560513	0.679829	UGAAAUG	AK035724|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	NM_029349|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	NM_173187|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	AK148005|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC051567|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC117950|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC117949|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	AK009628|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene
mm9_v1_chrX_-_17149313_17149460	0.678802	UGAAAUG	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr19_-_47089605_47089678	0.677771	UGAAAUG	AK162385|Nt5c2|76952|5'-nucleotidase, cytosolic II	NM_001164363|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr11_+_78279202_78279242	0.670164	UGAAAUG	NM_026740|Slc46a1|52466|solute carrier family 46, member 1	AK170505|Slc46a1|52466|solute carrier family 46, member 1	BC057976|Slc46a1|52466|solute carrier family 46, member 1	AK003278|Slc46a1|52466|solute carrier family 46, member 1	AK220201|Slc46a1|52466|solute carrier family 46, member 1
mm9_v1_chr13_+_51228165_51228173	0.661274	UGAAAUG	AK166532|Spin1|20729|spindlin 1	AK163301|Spin1|20729|spindlin 1	AK136251|Spin1|20729|spindlin 1	NM_011462|Spin1|20729|spindlin 1	AK135847|Spin1|20729|spindlin 1	AK135933|Spin1|20729|spindlin 1	AK139899|Spin1|20729|spindlin 1	AK162171|Spin1|20729|spindlin 1	AK162195|Spin1|20729|spindlin 1	AK163308|Spin1|20729|spindlin 1	AK163382|Spin1|20729|spindlin 1	AK136233|Spin1|20729|spindlin 1	AK163293|Spin1|20729|spindlin 1	AK135816|Spin1|20729|spindlin 1	AK163263|Spin1|20729|spindlin 1	AK166528|Spin1|20729|spindlin 1	AK166677|Spin1|20729|spindlin 1	AK162258|Spin1|20729|spindlin 1
mm9_v1_chr5_-_139960431_139960476	0.653884	UGAAAUG	NM_001159908|Zfand2a|100494|zinc finger, AN1-type domain 2A	NM_133349|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr11_+_60513191_60513346	0.652946	UGAAAUG	NM_001159404|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_001159405|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_008502|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC055399|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	AK159412|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	D16141|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC050913|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)
mm9_v1_chr5_-_100468240_100468240	0.651936	UGAAAUG	NM_016690|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chrX_-_165758200_165758305	0.651498	UGAAAUG	AK077566|Hccs|15159|holocytochrome c synthetase	BC061466|Hccs|15159|holocytochrome c synthetase	BC062905|Hccs|15159|holocytochrome c synthetase	NM_008222|Hccs|15159|holocytochrome c synthetase	AK143150|Hccs|15159|holocytochrome c synthetase	AK028608|Hccs|15159|holocytochrome c synthetase
mm9_v1_chr4_+_101091913_101091947	0.647455	UGAAAUG	NM_001177605|Ak4|11639|adenylate kinase 4	AK154374|Ak4|11639|adenylate kinase 4	NM_001177604|Ak4|11639|adenylate kinase 4
mm9_v1_chr9_-_108208272_108208302	0.645601	UGAAAUG	BC019397|Tcta|102791|T-cell leukemia translocation altered gene	NM_133986|Tcta|102791|T-cell leukemia translocation altered gene
mm9_v1_chrX_+_8777098_8777242	0.644682	UGAAAUG	AK031623|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)	NM_173414|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)	BC115944|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm9_v1_chr2_+_119798434_119798434	0.644656	UGAAAUG	BC070449|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1	NM_011941|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1
mm9_v1_chr14_-_48188088_48188108	0.636115	UGAAAUG	AK029330|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK029967|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	BC090995|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK054196|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	NM_172599|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)
mm9_v1_chr15_+_10930475_10930567	0.632694	UGAAAUG	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr2_-_166821559_166821808	0.628353	UGAAAUG	AK151835|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152744|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152269|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK041781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159602|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC082277|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK167637|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK005002|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030788|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030890|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK160979|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK139532|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC012959|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK145826|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109905|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109906|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_011490|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AF061942|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)
mm9_v1_chr2_-_73749317_73749415	0.626947	UGAAAUG	AK077930|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	NM_175015|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	AK087955|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
mm9_v1_chr1_+_131169878_131169880	0.626641	UGAAAUG	AK052119|Thsd7b|210417|thrombospondin, type I, domain containing 7B	NM_172485|Thsd7b|210417|thrombospondin, type I, domain containing 7B
mm9_v1_chr3_-_30868320_30868353	0.626604	UGAAAUG	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr18_-_61336629_61336741	0.626538	UGAAAUG	BC079580|Hmgxb3|106894|HMG box domain containing 3	AK088852|Hmgxb3|106894|HMG box domain containing 3	AK034086|Hmgxb3|106894|HMG box domain containing 3	AK041866|Hmgxb3|106894|HMG box domain containing 3	AK144993|Hmgxb3|106894|HMG box domain containing 3	NM_178277|Hmgxb3|106894|HMG box domain containing 3	AB045322|Hmgxb3|106894|HMG box domain containing 3	NM_134134|Hmgxb3|106894|HMG box domain containing 3
mm9_v1_chr18_+_68459987_68460081	0.618878	UGAAAUG	AK084393|Rnmt|67897|RNA (guanine-7-) methyltransferase	NM_001170953|Rnmt|67897|RNA (guanine-7-) methyltransferase	NM_026440|Rnmt|67897|RNA (guanine-7-) methyltransferase	AK011300|Rnmt|67897|RNA (guanine-7-) methyltransferase	AK082331|Rnmt|67897|RNA (guanine-7-) methyltransferase	AK031780|Rnmt|67897|RNA (guanine-7-) methyltransferase	AK015403|Rnmt|67897|RNA (guanine-7-) methyltransferase	BC021794|Rnmt|67897|RNA (guanine-7-) methyltransferase
mm9_v1_chr15_-_102455844_102455918	0.615716	UGAAAUG	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr4_+_49072327_49072465	0.612727	UGAAAUG	AK053451|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087514|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AY345342|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	NM_178756|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	BC096762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK047614|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK043762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr3_+_96025040_96025063	0.607098	UGAAAUG	AK090189|Hist2h2be|319190|histone cluster 2, H2be	AK143398|Hist2h2be|319190|histone cluster 2, H2be	AK162494|Hist2h2be|319190|histone cluster 2, H2be	AK167546|Hist2h2be|319190|histone cluster 2, H2be	AK170749|Hist2h2be|319190|histone cluster 2, H2be	BC058562|Hist2h2be|319190|histone cluster 2, H2be	AK078533|Hist2h2be|319190|histone cluster 2, H2be	NM_178214|Hist2h2be|319190|histone cluster 2, H2be	AK168767|Hist2h2be|319190|histone cluster 2, H2be	BC047137|Hist2h2be|319190|histone cluster 2, H2be
mm9_v1_chr1_-_128389495_128389552	0.602273	UGAAAUG	BC066095|Nckap5|210356|NCK-associated protein 5	BC079551|Nckap5|210356|NCK-associated protein 5	NM_172484|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr14_+_27399015_27399092	0.600839	UGAAAUG	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr7_+_13466525_13466568	0.595773	UGAAAUG	AK132244|Zfp128|243833|zinc finger protein 128	AK035906|Zfp128|243833|zinc finger protein 128	NM_153802|Zfp128|243833|zinc finger protein 128	AK032046|Zfp128|243833|zinc finger protein 128	BC088998|Zfp128|243833|zinc finger protein 128	BC094248|Zfp128|243833|zinc finger protein 128	AF480861|Zfp128|243833|zinc finger protein 128
mm9_v1_chr2_+_121782185_121782265	0.590359	UGAAAUG	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr19_-_37281762_37281782	0.589196	UGAAAUG	BC128377|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	AY313774|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	NM_198300|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr4_+_97444312_97444317	0.577738	UGAAAUG	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr10_+_114822009_114822046	0.57769	UGAAAUG	AK145652|Zfc3h1|216345|zinc finger, C3H1-type containing	NM_001033261|Zfc3h1|216345|zinc finger, C3H1-type containing
mm9_v1_chr2_+_148506844_148506905	0.574103	UGAAAUG	NM_028986|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK141153|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK052820|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK053262|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK080513|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr17_-_65962822_65962911	0.573974	UGAAAUG	AF157497|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK003576|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK159582|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK168824|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK088132|Vapa|30960|vesicle-associated membrane protein, associated protein A	BC003866|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK167381|Vapa|30960|vesicle-associated membrane protein, associated protein A	NM_013933|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr14_-_37748753_37748753	0.566946	UGAAAUG	AK005931|Gcap14|72972|granule cell antiserum positive 14	BC048641|Gcap14|72972|granule cell antiserum positive 14	BC060947|Gcap14|72972|granule cell antiserum positive 14	NM_028407|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr3_+_146067605_146067687	0.560729	UGAAAUG	AK049080|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	AK173064|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	AK031356|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	BC031527|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	BC021749|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	NM_138744|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein	AK043865|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein
mm9_v1_chrX_+_58962671_58962790	0.557553	UGAAAUG	AK137057|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	BC052689|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	NM_001018087|Ldoc1|434784|leucine zipper, down-regulated in cancer 1
mm9_v1_chr15_-_78971563_78971688	0.544527	UGAAAUG	BC068203|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC096672|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116891|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116893|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144714|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144715|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK030004|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK006539|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK007028|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	NM_138581|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene
mm9_v1_chr4_-_49562319_49562386	0.529186	UGAAAUG	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr3_+_40698182_40698266	0.522326	UGAAAUG	AK028580|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK014120|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK019438|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK031032|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK169375|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	NM_026622|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC051081|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC011312|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene
mm9_v1_chr5_+_13399301_13399308	0.521138	UGAAAUG	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr2_+_3341402_3341476	0.515003	UGAAAUG	NM_001110214|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_146114|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_175683|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AF387731|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK037126|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK088810|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052369|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	BC108935|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK166324|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052490|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK038788|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm9_v1_chr10_+_7512691_7512745	0.508578	UGAAAUG	AK017370|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	NM_026141|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014453|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK011443|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK013377|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014406|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK049634|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK164127|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167258|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK012371|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167168|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	BC079912|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4
mm9_v1_chr3_-_151500395_151500491	0.507141	UGAAAUG	AK087833|Ptgfr|19220|prostaglandin F receptor	D17433|Ptgfr|19220|prostaglandin F receptor	BC064794|Ptgfr|19220|prostaglandin F receptor	AK141760|Ptgfr|19220|prostaglandin F receptor	AK076450|Ptgfr|19220|prostaglandin F receptor	NM_008966|Ptgfr|19220|prostaglandin F receptor
mm9_v1_chr3_-_146433200_146433208	0.504398	UGAAAUG	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr8_-_107813357_107813427	0.500833	UGAAAUG	BC059045|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	AK049007|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_001166394|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_028888|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene
mm9_v1_chr9_+_35259660_35259661	0.496827	UGAAAUG	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chrX_-_140261954_140261960	0.478742	UGAAAUG	NM_007603|Capn6|12338|calpain 6	AK145116|Capn6|12338|calpain 6
mm9_v1_chr2_-_26264694_26264752	0.475788	UGAAAUG	AK170786|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AF226683|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC057566|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC080295|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC052717|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	NM_033134|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK170812|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK080075|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK047245|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK158135|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK154097|Inpp5e|64436|inositol polyphosphate-5-phosphatase E
mm9_v1_chr4_+_101092307_101092393	0.472593	UGAAAUG	NM_009647|Ak4|11639|adenylate kinase 4	AK144439|Ak4|11639|adenylate kinase 4	BC086791|Ak4|11639|adenylate kinase 4	D85036|Ak4|11639|adenylate kinase 4	AB020239|Ak4|11639|adenylate kinase 4	BC086663|Ak4|11639|adenylate kinase 4	AK166975|Ak4|11639|adenylate kinase 4
mm9_v1_chr13_+_13529868_13529883	0.465824	UGAAAUG	NM_010917|Nid1|18073|nidogen 1	BC052939|Nid1|18073|nidogen 1
mm9_v1_chr2_-_33743465_33743465	0.462183	UGAAAUG	BC059907|Fam125b|72543|family with sequence similarity 125, member B	NM_175184|Fam125b|72543|family with sequence similarity 125, member B
mm9_v1_chr16_-_13668230_13668281	0.457971	UGAAAUG	AK041044|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK160611|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	BC021899|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK049829|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK045181|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	AK004572|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)	NM_028761|Parn|74108|poly(A)-specific ribonuclease (deadenylation nuclease)
mm9_v1_chr9_-_107444181_107444195	0.453138	UGAAAUG	AK162586|Cyb561d2|56368|cytochrome b-561 domain containing 2	AK030225|Cyb561d2|56368|cytochrome b-561 domain containing 2	NM_019720|Cyb561d2|56368|cytochrome b-561 domain containing 2
mm9_v1_chr10_+_58684631_58684700	0.42784	UGAAAUG	AK030944|Ankrd57|268301|ankyrin repeat domain 57	NM_172939|Ankrd57|268301|ankyrin repeat domain 57	AK050497|Ankrd57|268301|ankyrin repeat domain 57
mm9_v1_chr2_-_12340979_12341107	0.427747	UGAAAUG	BC027202|Fam188a|66960|family with sequence similarity 188, member A	AK002900|Fam188a|66960|family with sequence similarity 188, member A	AK143250|Fam188a|66960|family with sequence similarity 188, member A	AK010050|Fam188a|66960|family with sequence similarity 188, member A	AK049869|Fam188a|66960|family with sequence similarity 188, member A	AK009891|Fam188a|66960|family with sequence similarity 188, member A	AK049694|Fam188a|66960|family with sequence similarity 188, member A	BC002225|Fam188a|66960|family with sequence similarity 188, member A	AK075792|Fam188a|66960|family with sequence similarity 188, member A	NM_024185|Fam188a|66960|family with sequence similarity 188, member A
mm9_v1_chr7_-_116637251_116637251	0.422424	UGAAAUG	AK147559|Trim66|330627|tripartite motif-containing 66	NM_001170913|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr1_-_130224894_130224894	0.417063	UGAAAUG	NM_001081078|Lct|226413|lactase
mm9_v1_chr9_-_42280256_42280323	0.413212	UGAAAUG	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr10_+_20032269_20032343	0.411476	UGAAAUG	NM_001025392|Bclaf1|72567|BCL2-associated transcription factor 1	NM_001025393|Bclaf1|72567|BCL2-associated transcription factor 1	NM_153787|Bclaf1|72567|BCL2-associated transcription factor 1	AK161692|Bclaf1|72567|BCL2-associated transcription factor 1	BC086624|Bclaf1|72567|BCL2-associated transcription factor 1	AK162896|Bclaf1|72567|BCL2-associated transcription factor 1	AK141834|Bclaf1|72567|BCL2-associated transcription factor 1	AK149724|Bclaf1|72567|BCL2-associated transcription factor 1	AK150017|Bclaf1|72567|BCL2-associated transcription factor 1	AK088741|Bclaf1|72567|BCL2-associated transcription factor 1	AK011802|Bclaf1|72567|BCL2-associated transcription factor 1	BC028963|Bclaf1|72567|BCL2-associated transcription factor 1	BC034300|Bclaf1|72567|BCL2-associated transcription factor 1	BC029682|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr14_+_28242002_28242052	0.410749	UGAAAUG	AK016751|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	AK044563|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	NM_001114879|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	NM_028945|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr18_-_36675458_36675463	0.409671	UGAAAUG	AK164309|Hbegf|15200|heparin-binding EGF-like growth factor	NM_010415|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr4_+_106323673_106323718	0.404427	UGAAAUG	NM_001083887|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	NM_172272|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	AK154150|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	BC038817|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)
mm9_v1_chr7_+_119369347_119369415	0.398404	UGAAAUG	NM_001193305|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	NM_177282|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK030608|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK138935|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK163078|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK143191|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK161075|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2	AK163231|Mical2|320878|microtubule associated monoxygenase, calponin and LIM domain containing 2
mm9_v1_chr2_-_91803660_91803893	0.392989	UGAAAUG	NM_138306|Dgkz|104418|diacylglycerol kinase zeta	BC049228|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr3_-_62409061_62409061	0.391419	UGAAAUG	AK136826|Gpr149|229357|G protein-coupled receptor 149	NM_177346|Gpr149|229357|G protein-coupled receptor 149
mm9_v1_chr1_+_58504476_58504476	0.389738	UGAAAUG	BC065163|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	NM_022988|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)
mm9_v1_chr8_+_124114323_124114400	0.388733	UGAAAUG	AF255953|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK132329|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC068180|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK002795|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003558|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK012604|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003106|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003205|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	NM_026160|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK151614|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC028812|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC110308|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC086774|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta
mm9_v1_chr14_-_55482884_55482994	0.374488	UGAAAUG	AK129361|Homez|239099|homeodomain leucine zipper-encoding gene	AY258064|Homez|239099|homeodomain leucine zipper-encoding gene	NM_001177705|Homez|239099|homeodomain leucine zipper-encoding gene
mm9_v1_chr2_+_31543895_31544075	0.369188	UGAAAUG	AK083248|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166210|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK090247|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166028|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK088252|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	NM_001112703|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase
mm9_v1_chr14_-_21871647_21871707	0.369156	UGAAAUG	AF242857|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	NM_018829|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr6_-_90760116_90760132	0.357238	UGAAAUG	NM_001134384|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr11_-_65601774_65601862	0.354619	UGAAAUG	AK139777|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044534|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044698|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK036928|Map2k4|26398|mitogen-activated protein kinase kinase 4	NM_009157|Map2k4|26398|mitogen-activated protein kinase kinase 4
mm9_v1_chr2_-_131178551_131178627	0.349041	UGAAAUG	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr5_+_123300153_123300232	0.344932	UGAAAUG	AK132330|Rnf34|80751|ring finger protein 34	BC004042|Rnf34|80751|ring finger protein 34	NM_030564|Rnf34|80751|ring finger protein 34	AK045696|Rnf34|80751|ring finger protein 34	AK046381|Rnf34|80751|ring finger protein 34	AK077221|Rnf34|80751|ring finger protein 34	AK150976|Rnf34|80751|ring finger protein 34	AK046274|Rnf34|80751|ring finger protein 34	AK159753|Rnf34|80751|ring finger protein 34	AK137606|Rnf34|80751|ring finger protein 34
mm9_v1_chr13_-_48608762_48608790	0.339932	UGAAAUG	BC060222|Zfp169|67911|zinc finger protein 169	NM_001164575|Zfp169|67911|zinc finger protein 169
mm9_v1_chr13_-_48608795_48608824	0.338374	UGAAAUG	AK162962|Zfp169|67911|zinc finger protein 169	AK086737|Zfp169|67911|zinc finger protein 169	NM_001164576|Zfp169|67911|zinc finger protein 169	NM_026450|Zfp169|67911|zinc finger protein 169
mm9_v1_chr14_+_122933538_122933557	0.335616	UGAAAUG	NM_144844|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide
mm9_v1_chr2_-_7317513_7317626	0.335388	UGAAAUG	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chrX_-_99266499_99266645	0.335203	UGAAAUG	BC132391|Rgag4|331474|retrotransposon gag domain containing 4	BC137795|Rgag4|331474|retrotransposon gag domain containing 4	AK032151|Rgag4|331474|retrotransposon gag domain containing 4	AK220436|Rgag4|331474|retrotransposon gag domain containing 4	NM_183318|Rgag4|331474|retrotransposon gag domain containing 4
mm9_v1_chr11_+_35582969_35582996	0.330553	UGAAAUG	AK039865|Pank3|211347|pantothenate kinase 3	NM_145962|Pank3|211347|pantothenate kinase 3
mm9_v1_chr2_-_113839354_113839354	0.328942	UGAAAUG	BC058595|Gjd2|14617|gap junction protein, delta 2	NM_010290|Gjd2|14617|gap junction protein, delta 2
mm9_v1_chr13_+_113450958_113450993	0.326016	UGAAAUG	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr1_+_145586675_145586780	0.314233	UGAAAUG	NM_001038592|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_023505|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC065387|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF380337|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132031|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132033|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145303|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145304|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF276918|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr1_+_163899318_163899328	0.313687	UGAAAUG	AK016394|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	NM_001039045|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	NM_026078|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK152660|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C
mm9_v1_chr17_+_71533317_71533374	0.304282	UGAAAUG	AF286723|Lpin2|64898|lipin 2	NM_022882|Lpin2|64898|lipin 2
mm9_v1_chr8_-_41596638_41596711	0.29133	UGAAAUG	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr6_-_38587232_38587241	0.291196	UGAAAUG	AK145064|Klrg2|74253|killer cell lectin-like receptor subfamily G, member 2	AK009417|Klrg2|74253|killer cell lectin-like receptor subfamily G, member 2	NM_001033171|Klrg2|74253|killer cell lectin-like receptor subfamily G, member 2	AK169862|Klrg2|74253|killer cell lectin-like receptor subfamily G, member 2
mm9_v1_chr6_+_147039596_147039596	0.29095	UGAAAUG	NM_001081237|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr11_-_45979836_45979862	0.287864	UGAAAUG	AK035736|Nipal4|214112|NIPA-like domain containing 4	BC139819|Nipal4|214112|NIPA-like domain containing 4	AK035561|Nipal4|214112|NIPA-like domain containing 4	NM_172524|Nipal4|214112|NIPA-like domain containing 4
mm9_v1_chr19_-_47044056_47044056	0.278996	UGAAAUG	NM_001164365|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr4_+_21703416_21703444	0.277261	UGAAAUG	AK040660|Usp45|77593|ubiquitin specific petidase 45	AK162825|Usp45|77593|ubiquitin specific petidase 45	NM_152825|Usp45|77593|ubiquitin specific petidase 45	AK088073|Usp45|77593|ubiquitin specific petidase 45	BC027768|Usp45|77593|ubiquitin specific petidase 45
mm9_v1_chr19_+_45092581_45092707	0.27334	UGAAAUG	NM_001130526|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK081367|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK129446|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr8_+_74405966_74406017	0.271284	UGAAAUG	AK031294|Zfp709|236193|zinc finger protein 709	NM_145624|Zfp709|236193|zinc finger protein 709	AK168304|Zfp709|236193|zinc finger protein 709	BC021921|Zfp709|236193|zinc finger protein 709
mm9_v1_chr2_+_91297678_91297857	0.271058	UGAAAUG	NM_001145857|Lrp4|228357|low density lipoprotein receptor-related protein 4	NM_172668|Lrp4|228357|low density lipoprotein receptor-related protein 4	BC132240|Lrp4|228357|low density lipoprotein receptor-related protein 4	AF247637|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr16_-_37539763_37539874	0.267391	UGAAAUG	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr5_+_36235967_36236084	0.260114	UGAAAUG	BC050814|Afap1|70292|actin filament associated protein 1	NM_027373|Afap1|70292|actin filament associated protein 1	AK161385|Afap1|70292|actin filament associated protein 1	AK080756|Afap1|70292|actin filament associated protein 1	AK129483|Afap1|70292|actin filament associated protein 1	AK147706|Afap1|70292|actin filament associated protein 1
mm9_v1_chr2_+_31805751_31805822	0.254055	UGAAAUG	AK045539|Aif1l|108897|allograft inflammatory factor 1-like	BC024599|Aif1l|108897|allograft inflammatory factor 1-like	NM_145144|Aif1l|108897|allograft inflammatory factor 1-like
mm9_v1_chr5_+_28397902_28397951	0.254017	UGAAAUG	AK135941|Insig1|231070|insulin induced gene 1	AK135989|Insig1|231070|insulin induced gene 1	AK139913|Insig1|231070|insulin induced gene 1	AK151186|Insig1|231070|insulin induced gene 1	AK088380|Insig1|231070|insulin induced gene 1	AF527630|Insig1|231070|insulin induced gene 1	BC132167|Insig1|231070|insulin induced gene 1	BC132499|Insig1|231070|insulin induced gene 1	BC079559|Insig1|231070|insulin induced gene 1	NM_153526|Insig1|231070|insulin induced gene 1
mm9_v1_chr6_+_13019758_13019870	0.249114	UGAAAUG	NM_027992|Tmem106b|71900|transmembrane protein 106B	AK148477|Tmem106b|71900|transmembrane protein 106B	BC050246|Tmem106b|71900|transmembrane protein 106B	AK018015|Tmem106b|71900|transmembrane protein 106B	AK009646|Tmem106b|71900|transmembrane protein 106B
mm9_v1_chr9_-_53344748_53344787	0.248842	UGAAAUG	AK031702|Atm|11920|ataxia telangiectasia mutated homolog (human)	NM_007499|Atm|11920|ataxia telangiectasia mutated homolog (human)	AK139863|Atm|11920|ataxia telangiectasia mutated homolog (human)
mm9_v1_chr10_-_76978494_76978577	0.245368	UGAAAUG	BC034216|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AK088306|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AK076516|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AF391115|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	NM_133998|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene
mm9_v1_chr14_-_55479326_55479326	0.243292	UGAAAUG	BC094669|Homez|239099|homeodomain leucine zipper-encoding gene	NM_183174|Homez|239099|homeodomain leucine zipper-encoding gene
mm9_v1_chr13_-_61356684_61356712	0.239234	UGAAAUG	BC068241|Cts8|56094|cathepsin 8	AY014780|Cts8|56094|cathepsin 8	AK049474|Cts8|56094|cathepsin 8	NM_019541|Cts8|56094|cathepsin 8	AF250840|Cts8|56094|cathepsin 8
mm9_v1_chr17_+_84911219_84911272	0.239232	UGAAAUG	AK029252|Plekhh2|213556|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	NM_177606|Plekhh2|213556|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	BC125583|Plekhh2|213556|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	BC137804|Plekhh2|213556|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	BC021518|Plekhh2|213556|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm9_v1_chr16_+_32914183_32914232	0.238899	UGAAAUG	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr13_-_58712170_58712237	0.237938	UGAAAUG	AF305211|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	BC010472|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	BC013783|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	BC037061|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	AK052784|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	AK085680|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	AK145077|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	AK164740|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	AK164752|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3	NM_022317|Slc28a3|114304|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
mm9_v1_chr14_-_70748237_70748239	0.225422	UGAAAUG	AK090193|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AK050076|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135152|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr12_-_119539909_119539930	0.224112	UGAAAUG	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr2_-_105744649_105744720	0.222335	UGAAAUG	AJ276004|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK039758|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	NM_023876|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK034040|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK020742|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK034529|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK039447|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK079069|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK037104|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)	AK168964|Elp4|77766|elongation protein 4 homolog (S. cerevisiae)
mm9_v1_chr8_+_70014656_70014656	0.219328	UGAAAUG	NM_008673|Nat1|17960|N-acetyl transferase 1	U35885|Nat1|17960|N-acetyl transferase 1
mm9_v1_chr4_+_101091875_101091893	0.217919	UGAAAUG	AK134600|Ak4|11639|adenylate kinase 4	NM_001177602|Ak4|11639|adenylate kinase 4
mm9_v1_chr10_-_9620837_9620892	0.209969	UGAAAUG	NM_001081344|Stxbp5|78808|syntaxin binding protein 5 (tomosyn)
mm9_v1_chr1_-_172145521_172145534	0.20215	UGAAAUG	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr3_+_159502646_159502709	0.201617	UGAAAUG	BC075615|Wls|68151|wntless homolog (Drosophila)	NM_026582|Wls|68151|wntless homolog (Drosophila)	AK029053|Wls|68151|wntless homolog (Drosophila)	AK044810|Wls|68151|wntless homolog (Drosophila)	AK019886|Wls|68151|wntless homolog (Drosophila)	AK029104|Wls|68151|wntless homolog (Drosophila)	AK029315|Wls|68151|wntless homolog (Drosophila)	AK031444|Wls|68151|wntless homolog (Drosophila)	AK049842|Wls|68151|wntless homolog (Drosophila)	AK128912|Wls|68151|wntless homolog (Drosophila)	AK159207|Wls|68151|wntless homolog (Drosophila)	AK159977|Wls|68151|wntless homolog (Drosophila)	AK077407|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr11_+_114536748_114536848	0.200985	UGAAAUG	AK154835|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK155166|Ttyh2|117160|tweety homolog 2 (Drosophila)	NM_053273|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK168408|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK152172|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK156393|Ttyh2|117160|tweety homolog 2 (Drosophila)	AF329682|Ttyh2|117160|tweety homolog 2 (Drosophila)	BC060740|Ttyh2|117160|tweety homolog 2 (Drosophila)
mm9_v1_chr16_-_62846777_62846879	0.194636	UGAAAUG	AK016794|Arl13b|68146|ADP-ribosylation factor-like 13B	AK020859|Arl13b|68146|ADP-ribosylation factor-like 13B	AK051159|Arl13b|68146|ADP-ribosylation factor-like 13B	AK021270|Arl13b|68146|ADP-ribosylation factor-like 13B	NM_026577|Arl13b|68146|ADP-ribosylation factor-like 13B
mm9_v1_chr19_+_8893890_8893890	0.189688	UGAAAUG	NM_001081196|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr3_+_138189154_138189154	0.188039	UGAAAUG	NM_007917|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr4_-_135129534_135129534	0.183941	UGAAAUG	BC089372|Grhl3|230824|grainyhead-like 3 (Drosophila)	NM_001013756|Grhl3|230824|grainyhead-like 3 (Drosophila)
mm9_v1_chrX_-_53851046_53851096	0.18171	UGAAAUG	EU069461|Mmgt1|236792|membrane magnesium transporter 1	AK049689|Mmgt1|236792|membrane magnesium transporter 1	AK036253|Mmgt1|236792|membrane magnesium transporter 1	NM_146234|Mmgt1|236792|membrane magnesium transporter 1
mm9_v1_chr13_-_99032887_99032971	0.180601	UGAAAUG	AY151261|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK165546|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK049186|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC065057|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	NM_178918|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK162794|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK087928|Utp15|105372|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr9_-_4309446_4309517	0.178494	UGAAAUG	AK013111|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076099|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK010557|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK028700|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC038013|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC049851|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK008554|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC030043|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK144671|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076866|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK014188|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK029523|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK081818|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK031766|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK088977|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK007737|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	NM_026276|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr3_+_51028368_51028391	0.178414	UGAAAUG	AK087790|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	NM_009834|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF183960|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK149340|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr6_-_128305798_128305874	0.176955	UGAAAUG	BC060068|Tulp3|22158|tubby-like protein 3	AB016963|Tulp3|22158|tubby-like protein 3	AF045582|Tulp3|22158|tubby-like protein 3	AK035363|Tulp3|22158|tubby-like protein 3	AK009482|Tulp3|22158|tubby-like protein 3	AK142527|Tulp3|22158|tubby-like protein 3	NM_011657|Tulp3|22158|tubby-like protein 3
mm9_v1_chr3_+_135488454_135488592	0.172594	UGAAAUG	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr13_+_106233718_106234065	0.172026	UGAAAUG	AK140194|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	NM_008308|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049884|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049814|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138669|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138681|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A
mm9_v1_chr14_-_51415402_51415402	0.171849	UGAAAUG	NM_001111119|Ccnb1ip1|239083|cyclin B1 interacting protein 1
mm9_v1_chr4_+_146124224_146124224	0.171009	UGAAAUG	NM_001177546|Zfp600|667666|zinc finger protein 600
mm9_v1_chr2_-_39046224_39046253	0.170849	UGAAAUG	BC132485|Scai|320271|suppressor of cancer cell invasion	BC144986|Scai|320271|suppressor of cancer cell invasion	BC144987|Scai|320271|suppressor of cancer cell invasion	BC144989|Scai|320271|suppressor of cancer cell invasion	AK044772|Scai|320271|suppressor of cancer cell invasion	AK082408|Scai|320271|suppressor of cancer cell invasion	AK083280|Scai|320271|suppressor of cancer cell invasion	NM_178778|Scai|320271|suppressor of cancer cell invasion	AK163712|Scai|320271|suppressor of cancer cell invasion
mm9_v1_chr9_+_77956998_77957048	0.169025	UGAAAUG	AK154185|Ick|56542|intestinal cell kinase	NM_001163780|Ick|56542|intestinal cell kinase
mm9_v1_chr16_+_25683848_25683850	0.16705	UGAAAUG	AK138305|Trp63|22061|transformation related protein 63	NM_001127259|Trp63|22061|transformation related protein 63	NM_001127260|Trp63|22061|transformation related protein 63	NM_001127261|Trp63|22061|transformation related protein 63
mm9_v1_chr1_-_123424939_123425041	0.162277	UGAAAUG	BC114988|Htr5b|15564|5-hydroxytryptamine (serotonin) receptor 5B	BC115825|Htr5b|15564|5-hydroxytryptamine (serotonin) receptor 5B	NM_010483|Htr5b|15564|5-hydroxytryptamine (serotonin) receptor 5B	X69867|Htr5b|15564|5-hydroxytryptamine (serotonin) receptor 5B
mm9_v1_chr9_-_54874200_54874368	0.158623	UGAAAUG	AY574262|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF325346|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	BC120597|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	BC120599|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF472588|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK053497|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK148786|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF459029|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK080475|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK080415|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	NM_145129|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK051730|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3
mm9_v1_chr2_-_35992076_35992223	0.153599	UGAAAUG	AK008110|Rbm18|67889|RNA binding motif protein 18	AK021243|Rbm18|67889|RNA binding motif protein 18	AK036252|Rbm18|67889|RNA binding motif protein 18	BC005540|Rbm18|67889|RNA binding motif protein 18	AK035348|Rbm18|67889|RNA binding motif protein 18	AK036220|Rbm18|67889|RNA binding motif protein 18	AK135109|Rbm18|67889|RNA binding motif protein 18	NM_001159635|Rbm18|67889|RNA binding motif protein 18	NM_026434|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr13_-_94407590_94407712	0.147043	UGAAAUG	NM_016668|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr17_-_80606644_80606647	0.146621	UGAAAUG	AK034952|Srsf7|225027|serine/arginine-rich splicing factor 7	AK137795|Srsf7|225027|serine/arginine-rich splicing factor 7	AK168355|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195485|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195486|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195487|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_146083|Srsf7|225027|serine/arginine-rich splicing factor 7
mm9_v1_chr1_+_19202046_19202134	0.146175	UGAAAUG	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr12_+_21117592_21117662	0.137299	UGAAAUG	AK147622|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	BC080847|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	NM_001004364|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	NM_001098168|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	NM_001135192|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
mm9_v1_chr5_-_123974130_123974185	0.136806	UGAAAUG	AF203914|Diablo|66593|diablo homolog (Drosophila)	AK002887|Diablo|66593|diablo homolog (Drosophila)	AK082903|Diablo|66593|diablo homolog (Drosophila)	AK169573|Diablo|66593|diablo homolog (Drosophila)	BC024780|Diablo|66593|diablo homolog (Drosophila)	AK077198|Diablo|66593|diablo homolog (Drosophila)	AK133194|Diablo|66593|diablo homolog (Drosophila)	BC054109|Diablo|66593|diablo homolog (Drosophila)	AK012760|Diablo|66593|diablo homolog (Drosophila)	NM_023232|Diablo|66593|diablo homolog (Drosophila)
mm9_v1_chr3_-_123375305_123375392	0.126296	UGAAAUG	BC112404|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC079622|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_031186|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AF221095|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm9_v1_chr2_-_14976498_14976510	0.125457	UGAAAUG	AK016629|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165941|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165943|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	AK016811|Nsun6|74455|NOL1/NOP2/Sun domain family member 6
mm9_v1_chr10_+_27794625_27794662	0.123017	UGAAAUG	NM_008983|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK078614|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC138376|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC145261|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK083006|Ptprk|19272|protein tyrosine phosphatase, receptor type, K
mm9_v1_chr2_-_181327165_181327210	0.121949	UGAAAUG	AK129308|Znf512b|269401|zinc finger protein 512B	NM_001164597|Znf512b|269401|zinc finger protein 512B
mm9_v1_chr2_+_133378934_133378934	0.120016	UGAAAUG	BC100344|Bmp2|12156|bone morphogenetic protein 2	NM_007553|Bmp2|12156|bone morphogenetic protein 2
mm9_v1_chr1_-_154233721_154233811	0.11583	UGAAAUG	AK169429|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC024342|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK004261|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK053666|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK011608|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC145701|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK017650|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_025677|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm9_v1_chr13_-_89881946_89882116	0.112342	UGAAAUG	BC021652|Vcan|13003|versican	AK163927|Vcan|13003|versican	AK135324|Vcan|13003|versican	AK032794|Vcan|13003|versican	NM_001081249|Vcan|13003|versican	NM_001134474|Vcan|13003|versican	NM_001134475|Vcan|13003|versican	NM_019389|Vcan|13003|versican	NM_172955|Vcan|13003|versican
mm9_v1_chr7_-_116895708_116895795	0.11211	UGAAAUG	AK009147|Tmem9b|56786|TMEM9 domain family, member B	AK077253|Tmem9b|56786|TMEM9 domain family, member B	AK007430|Tmem9b|56786|TMEM9 domain family, member B	BC002208|Tmem9b|56786|TMEM9 domain family, member B	NM_020050|Tmem9b|56786|TMEM9 domain family, member B	AK147127|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr4_-_120770603_120770864	0.111398	UGAAAUG	AY029194|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC138578|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC023740|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK170946|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AJ487544|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK083566|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	NM_172700|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)
mm9_v1_chr10_+_127496002_127496084	0.111071	UGAAAUG	AK008805|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AY281130|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK010636|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK077538|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	NM_019766|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK167443|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)
mm9_v1_chr3_+_94758936_94758955	0.107789	UGAAAUG	NM_017395|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AB221679|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AF209854|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC118948|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC118949|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)
mm9_v1_chr4_+_21806813_21806887	0.10701	UGAAAUG	BC060960|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK028680|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	NM_172687|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK035318|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK170488|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK166475|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK142287|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)
mm9_v1_chr14_-_37781943_37781973	0.106839	UGAAAUG	AK147383|Gcap14|72972|granule cell antiserum positive 14	NM_027045|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chrX_+_39421012_39421147	0.106132	UGAAAUG	NM_009688|Xiap|11798|X-linked inhibitor of apoptosis
mm9_v1_chr2_+_21289168_21289199	0.104536	UGAAAUG	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr16_+_97578333_97578399	0.103746	UGAAAUG	NM_019517|Bace2|56175|beta-site APP-cleaving enzyme 2	AK052309|Bace2|56175|beta-site APP-cleaving enzyme 2	AK078770|Bace2|56175|beta-site APP-cleaving enzyme 2	BC120773|Bace2|56175|beta-site APP-cleaving enzyme 2	BC131947|Bace2|56175|beta-site APP-cleaving enzyme 2	AF216310|Bace2|56175|beta-site APP-cleaving enzyme 2	AK165036|Bace2|56175|beta-site APP-cleaving enzyme 2
mm9_v1_chr10_+_18127443_18127504	0.10241	UGAAAUG	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr1_+_82583495_82583550	0.0967831	UGAAAUG	AK086939|Col4a3|12828|collagen, type IV, alpha 3	NM_007734|Col4a3|12828|collagen, type IV, alpha 3	AF169387|Col4a3|12828|collagen, type IV, alpha 3
mm9_v1_chr16_+_20097626_20097705	0.0943594	UGAAAUG	NM_029436|Klhl24|75785|kelch-like 24 (Drosophila)	AK015239|Klhl24|75785|kelch-like 24 (Drosophila)	AK044892|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr19_+_56536126_56536129	0.0747061	UGAAAUG	NM_001164263|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	NM_172641|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK036908|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK053921|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr18_-_60432920_60432925	0.0702872	UGAAAUG	BC150900|Gm4841|225594|predicted gene 4841	NM_001034859|Gm4841|225594|predicted gene 4841	AK156469|Gm4841|225594|predicted gene 4841
mm9_v1_chr9_+_20456531_20456579	0.0686723	UGAAAUG	AK002665|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AB009691|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK003931|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK160228|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK003369|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK054045|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK150652|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	NM_023371|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	AK139395|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	BC038254|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm9_v1_chr18_-_84255781_84255953	0.0644254	UGAAAUG	BC040215|Tshz1|110796|teashirt zinc finger family member 1	AK220545|Tshz1|110796|teashirt zinc finger family member 1	AK152140|Tshz1|110796|teashirt zinc finger family member 1	NM_001081300|Tshz1|110796|teashirt zinc finger family member 1
mm9_v1_chrX_-_83021840_83022157	0.0631147	UGAAAUG	U48403|Gyk|14933|glycerol kinase	AK008186|Gyk|14933|glycerol kinase	BC003767|Gyk|14933|glycerol kinase	AK169424|Gyk|14933|glycerol kinase	AK088373|Gyk|14933|glycerol kinase	AK044308|Gyk|14933|glycerol kinase	AK169525|Gyk|14933|glycerol kinase	NM_008194|Gyk|14933|glycerol kinase	NM_212444|Gyk|14933|glycerol kinase
mm9_v1_chr4_+_146125090_146125090	0.0630534	UGAAAUG	BC108352|Zfp600|667666|zinc finger protein 600	NM_001177545|Zfp600|667666|zinc finger protein 600
mm9_v1_chr6_+_5333385_5333385	0.0592239	UGAAAUG	BC046819|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC056440|Asb4|65255|ankyrin repeat and SOCS box-containing 4	NM_023048|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr1_-_99558490_99558623	0.0578135	UGAAAUG	AK162223|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK135656|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC019375|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC023951|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK152370|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK168549|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	NM_133825|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr7_+_119902897_119902956	0.0559954	UGAAAUG	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr15_+_99800504_99800504	0.0533677	UGAAAUG	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr12_+_66176588_66176613	0.048139	UGAAAUG	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr2_-_148233853_148233923	0.0472828	UGAAAUG	AK044928|Thbd|21824|thrombomodulin	AK089479|Thbd|21824|thrombomodulin	NM_009378|Thbd|21824|thrombomodulin
mm9_v1_chr6_+_15135505_15135508	0.0402454	UGAAAUG	BC062926|Foxp2|114142|forkhead box P2	NM_212435|Foxp2|114142|forkhead box P2	BC058960|Foxp2|114142|forkhead box P2
mm9_v1_chr10_-_94878845_94878845	0.0344146	UGAAAUG	NM_001168655|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr4_+_149461473_149461659	0.0291864	UGAAAUG	AK089429|Gpr157|269604|G protein-coupled receptor 157	NM_177366|Gpr157|269604|G protein-coupled receptor 157	BC117996|Gpr157|269604|G protein-coupled receptor 157	AK089544|Gpr157|269604|G protein-coupled receptor 157
mm9_v1_chr1_+_43009716_43009807	0.0272127	UGAAAUG	AK054151|Gpr45|93690|G protein-coupled receptor 45	NM_053107|Gpr45|93690|G protein-coupled receptor 45	AK035091|Gpr45|93690|G protein-coupled receptor 45	AK039769|Gpr45|93690|G protein-coupled receptor 45
mm9_v1_chr1_+_145586478_145586478	0.02595	UGAAAUG	AK005853|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_001038593|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr14_+_120674886_120674908	0.0210681	UGAAAUG	NM_175341|Mbnl2|105559|muscleblind-like 2	NM_207515|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr12_+_52478496_52478591	0.0197387	UGAAAUG	AK014070|Scfd1|76983|Sec1 family domain containing 1	AK039908|Scfd1|76983|Sec1 family domain containing 1	AK044943|Scfd1|76983|Sec1 family domain containing 1	AK049361|Scfd1|76983|Sec1 family domain containing 1	NM_029825|Scfd1|76983|Sec1 family domain containing 1	AK041028|Scfd1|76983|Sec1 family domain containing 1	AK050504|Scfd1|76983|Sec1 family domain containing 1	AK129238|Scfd1|76983|Sec1 family domain containing 1
mm9_v1_chr6_+_21935907_21936001	0.0149625	UGAAAUG	AK087585|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	NM_001081351|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK033229|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK040587|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene
mm9_v1_chr14_-_21208006_21208158	0.0131573	UGAAAUG	AK162075|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC023787|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC027012|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK075979|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK153033|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC014686|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK043725|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK077324|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	NM_134081|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9
mm9_v1_chr2_-_5635547_5635807	0.00208504	UGAAAUG	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr6_-_118147735_118147761	0.000569679	UGAAAUG	BC059012|Ret|19713|ret proto-oncogene	NM_001080780|Ret|19713|ret proto-oncogene	NM_009050|Ret|19713|ret proto-oncogene
