mm9_v1_chr2_+_136539143_136539198	40.0505	UGCAUAG	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr3_+_8509479_8509599	25.0371	UGCAUAG	AK149212|Stmn2|20257|stathmin-like 2	AK043202|Stmn2|20257|stathmin-like 2	AK003659|Stmn2|20257|stathmin-like 2	AK013020|Stmn2|20257|stathmin-like 2	NM_025285|Stmn2|20257|stathmin-like 2	BC026538|Stmn2|20257|stathmin-like 2
mm9_v1_chr2_-_52532100_52532129	21.9668	UGCAUAG	AK147338|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_001037099|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr2_-_52414072_52414117	21.1482	UGCAUAG	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr18_-_31606908_31607087	19.7344	UGCAUAG	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chr4_-_110024513_110024515	18.9599	UGCAUAG	AF041341|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163397|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr1_-_175297778_175297829	18.434	UGCAUAG	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr1_-_134539434_134539434	18.1984	UGCAUAG	NM_001160316|Nfasc|269116|neurofascin
mm9_v1_chr15_+_100766701_100766755	17.8479	UGCAUAG	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr4_-_91038729_91038745	17.8132	UGCAUAG	U29088|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_010486|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207686|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr15_+_100701068_100701116	17.0651	UGCAUAG	NM_001077499|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AK158609|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr4_-_91066674_91066674	17.0217	UGCAUAG	BC049125|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	BC058393|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207685|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr16_-_45724422_45724643	17.001	UGCAUAG	BC043027|Tagln3|56370|transgelin 3	AB031291|Tagln3|56370|transgelin 3	AK013484|Tagln3|56370|transgelin 3	BC055338|Tagln3|56370|transgelin 3	NM_019754|Tagln3|56370|transgelin 3
mm9_v1_chr11_-_46125777_46125868	16.6205	UGCAUAG	AK018280|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AF334144|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK030397|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK147971|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	BC056974|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK147586|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	NM_133769|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2
mm9_v1_chr4_-_91042997_91043190	16.5888	UGCAUAG	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr6_-_126595818_126595818	15.9664	UGCAUAG	NM_010595|Kcna1|16485|potassium voltage-gated channel, shaker-related subfamily, member 1
mm9_v1_chr5_+_27375738_27375738	15.8352	UGCAUAG	AK158964|Dpp6|13483|dipeptidylpeptidase 6	NM_207282|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr1_-_134638361_134638397	15.0571	UGCAUAG	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr1_-_134603848_134603902	14.9847	UGCAUAG	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr3_-_117063793_117063793	14.756	UGCAUAG	AF541279|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK046782|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266266|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266267|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	NM_177664|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr4_-_109959366_109959438	14.7231	UGCAUAG	BC048159|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163399|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_010488|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr3_-_55987612_55987634	14.3767	UGCAUAG	NM_030595|Nbea|26422|neurobeachin	Y18276|Nbea|26422|neurobeachin
mm9_v1_chr5_+_27143896_27143973	14.3407	UGCAUAG	AF092507|Dpp6|13483|dipeptidylpeptidase 6	NM_010075|Dpp6|13483|dipeptidylpeptidase 6	AK082186|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr10_+_4424140_4424212	14.1333	UGCAUAG	AK030492|Rgs17|56533|regulator of G-protein signaling 17	NM_001161822|Rgs17|56533|regulator of G-protein signaling 17	NM_019958|Rgs17|56533|regulator of G-protein signaling 17	AK018279|Rgs17|56533|regulator of G-protein signaling 17	AK045770|Rgs17|56533|regulator of G-protein signaling 17	AK046009|Rgs17|56533|regulator of G-protein signaling 17	AK078745|Rgs17|56533|regulator of G-protein signaling 17	AK163188|Rgs17|56533|regulator of G-protein signaling 17	AF191555|Rgs17|56533|regulator of G-protein signaling 17	BC064782|Rgs17|56533|regulator of G-protein signaling 17
mm9_v1_chr5_-_49280703_49280795	13.9289	UGCAUAG	AF453243|Kcnip4|80334|Kv channel interacting protein 4	AK165773|Kcnip4|80334|Kv channel interacting protein 4	AK049662|Kcnip4|80334|Kv channel interacting protein 4	DQ148503|Kcnip4|80334|Kv channel interacting protein 4	AK039048|Kcnip4|80334|Kv channel interacting protein 4	NM_030265|Kcnip4|80334|Kv channel interacting protein 4
mm9_v1_chr17_+_44090139_44090183	13.7577	UGCAUAG	BC049096|Rcan2|53901|regulator of calcineurin 2	NM_030598|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr5_+_27588462_27588514	13.4743	UGCAUAG	NM_001136060|Dpp6|13483|dipeptidylpeptidase 6	AK031903|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr18_+_37089837_37089938	13.3074	UGCAUAG	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr18_+_37127284_37127409	12.9731	UGCAUAG	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr18_+_37098858_37098971	12.7897	UGCAUAG	BC030897|Pcdha2|353234|protocadherin alpha 2	NM_198117|Pcdha2|353234|protocadherin alpha 2	BC141390|Pcdha2|353234|protocadherin alpha 2	AY013760|Pcdha2|353234|protocadherin alpha 2
mm9_v1_chr4_-_109960078_109960115	12.7231	UGCAUAG	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr18_+_37179802_37179999	12.6296	UGCAUAG	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr17_+_43938789_43938843	12.5887	UGCAUAG	NM_207649|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr18_+_37120093_37120209	12.4128	UGCAUAG	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr4_+_84851330_84851416	12.376	UGCAUAG	AK044370|Sh3gl2|20404|SH3-domain GRB2-like 2	BC018385|Sh3gl2|20404|SH3-domain GRB2-like 2	NM_019535|Sh3gl2|20404|SH3-domain GRB2-like 2	AK043424|Sh3gl2|20404|SH3-domain GRB2-like 2	AK139337|Sh3gl2|20404|SH3-domain GRB2-like 2	U58886|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr17_-_51965912_51965912	12.3452	UGCAUAG	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr18_+_37105758_37105860	12.1333	UGCAUAG	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr13_-_105844882_105845009	11.945	UGCAUAG	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr11_+_68902025_68902081	11.9039	UGCAUAG	BC055105|Vamp2|22318|vesicle-associated membrane protein 2	NM_009497|Vamp2|22318|vesicle-associated membrane protein 2	BC039745|Vamp2|22318|vesicle-associated membrane protein 2	U60150|Vamp2|22318|vesicle-associated membrane protein 2
mm9_v1_chrX_-_20498021_20498157	11.8962	UGCAUAG	BC022954|Syn1|20964|synapsin I	NM_001110780|Syn1|20964|synapsin I	NM_013680|Syn1|20964|synapsin I
mm9_v1_chr18_+_37157533_37157533	11.7357	UGCAUAG	AY013767|Pcdha9|192161|protocadherin alpha 9	NM_138661|Pcdha9|192161|protocadherin alpha 9
mm9_v1_chr18_+_37849488_37849707	11.4681	UGCAUAG	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr5_-_133018212_133018273	11.3739	UGCAUAG	BC096021|Auts2|319974|autism susceptibility candidate 2	NM_177047|Auts2|319974|autism susceptibility candidate 2	BC151031|Auts2|319974|autism susceptibility candidate 2	BC151047|Auts2|319974|autism susceptibility candidate 2	AK052418|Auts2|319974|autism susceptibility candidate 2
mm9_v1_chr18_+_37152024_37152120	11.1421	UGCAUAG	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr16_-_67621054_67621188	11.1397	UGCAUAG	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr18_+_37906739_37906841	11.1396	UGCAUAG	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr7_+_146132386_146132432	11.0826	UGCAUAG	AK018189|Jakmip3|74004|janus kinase and microtubule interacting protein 3	AK220482|Jakmip3|74004|janus kinase and microtubule interacting protein 3	NM_028708|Jakmip3|74004|janus kinase and microtubule interacting protein 3
mm9_v1_chr18_+_37303622_37303622	11.0241	UGCAUAG	AY013769|Pcdhac2|353237|protocadherin alpha subfamily C, 2	NM_001003672|Pcdhac2|353237|protocadherin alpha subfamily C, 2
mm9_v1_chrX_+_80194208_80194241	11.0212	UGCAUAG	AK052856|Dmd|13405|dystrophin, muscular dystrophy	NM_007868|Dmd|13405|dystrophin, muscular dystrophy	M68859|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr18_+_37833939_37833988	10.9937	UGCAUAG	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr18_+_37844927_37845053	10.9533	UGCAUAG	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr18_+_37885359_37885546	10.9277	UGCAUAG	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr12_+_53800369_53800393	10.9182	UGCAUAG	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr18_+_37828606_37828758	10.8473	UGCAUAG	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chr2_-_167014273_167014317	10.7929	UGCAUAG	BC031776|Kcnb1|16500|potassium voltage gated channel, Shab-related subfamily, member 1	BC051422|Kcnb1|16500|potassium voltage gated channel, Shab-related subfamily, member 1	BC061501|Kcnb1|16500|potassium voltage gated channel, Shab-related subfamily, member 1	NM_008420|Kcnb1|16500|potassium voltage gated channel, Shab-related subfamily, member 1	DQ646377|Kcnb1|16500|potassium voltage gated channel, Shab-related subfamily, member 1
mm9_v1_chr18_+_37133455_37133703	10.7908	UGCAUAG	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr9_-_54349409_54349432	10.7262	UGCAUAG	AK170274|Dmxl2|235380|Dmx-like 2	AK048831|Dmxl2|235380|Dmx-like 2	AK053672|Dmxl2|235380|Dmx-like 2	NM_172771|Dmxl2|235380|Dmx-like 2
mm9_v1_chr5_+_27231234_27231317	10.7204	UGCAUAG	AK051708|Dpp6|13483|dipeptidylpeptidase 6	BC085154|Dpp6|13483|dipeptidylpeptidase 6	NM_001198886|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr2_+_106535757_106535757	10.5581	UGCAUAG	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr17_-_51972514_51972614	10.5292	UGCAUAG	BC011132|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163632|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr18_+_37966017_37966102	10.4224	UGCAUAG	AK089310|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC059175|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	NM_033581|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC098457|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr5_+_14514906_14514924	10.3884	UGCAUAG	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr18_+_37901716_37901894	10.3768	UGCAUAG	BC054556|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	NM_033578|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	AY013808|Pcdhgb6|93703|protocadherin gamma subfamily B, 6
mm9_v1_chr18_+_37890662_37890807	10.3546	UGCAUAG	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr18_+_37839910_37840111	10.0622	UGCAUAG	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr2_-_112870487_112870487	9.94532	UGCAUAG	NM_177652|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr18_+_37911236_37911432	9.87942	UGCAUAG	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr18_+_37915375_37915594	9.83971	UGCAUAG	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr18_+_37896589_37896589	9.82105	UGCAUAG	BC079567|Pcdhga9|93717|protocadherin gamma subfamily A, 9	NM_033592|Pcdhga9|93717|protocadherin gamma subfamily A, 9
mm9_v1_chr18_+_37874471_37874595	9.50748	UGCAUAG	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr18_+_37921454_37921532	9.47212	UGCAUAG	BC139099|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	BC139100|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	NM_033580|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	AY013810|Pcdhgb8|93705|protocadherin gamma subfamily B, 8
mm9_v1_chr18_+_37979199_37979219	9.4256	UGCAUAG	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr2_+_134611879_134611910	9.38992	UGCAUAG	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr18_+_37821598_37821598	9.2911	UGCAUAG	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr2_-_79296732_79296799	9.25075	UGCAUAG	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr18_-_74224541_74224647	9.20621	UGCAUAG	AK157930|Mapk4|225724|mitogen-activated protein kinase 4	AK046051|Mapk4|225724|mitogen-activated protein kinase 4	AK079654|Mapk4|225724|mitogen-activated protein kinase 4	NM_172632|Mapk4|225724|mitogen-activated protein kinase 4
mm9_v1_chr18_+_37925233_37925233	8.98662	UGCAUAG	BC056998|Pcdhga12|93724|protocadherin gamma subfamily A, 12	NM_033595|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr8_-_26895633_26895758	8.94388	UGCAUAG	BC058518|Bag4|67384|BCL2-associated athanogene 4	AK162658|Bag4|67384|BCL2-associated athanogene 4	BC037239|Bag4|67384|BCL2-associated athanogene 4	AK010765|Bag4|67384|BCL2-associated athanogene 4	AK136899|Bag4|67384|BCL2-associated athanogene 4	AK160316|Bag4|67384|BCL2-associated athanogene 4	AF332863|Bag4|67384|BCL2-associated athanogene 4	NM_026121|Bag4|67384|BCL2-associated athanogene 4	BC138201|Bag4|67384|BCL2-associated athanogene 4	BC145986|Bag4|67384|BCL2-associated athanogene 4
mm9_v1_chr18_+_37866747_37866882	8.93627	UGCAUAG	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr18_+_37880036_37880207	8.84057	UGCAUAG	AK083581|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	BC138701|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	AY013806|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	NM_033576|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr2_+_102498839_102498845	8.75682	UGCAUAG	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr1_-_77511653_77511664	8.71141	UGCAUAG	AK028509|Epha4|13838|Eph receptor A4	AK147698|Epha4|13838|Eph receptor A4	AK132203|Epha4|13838|Eph receptor A4	NM_007936|Epha4|13838|Eph receptor A4	S57168|Epha4|13838|Eph receptor A4	X65138|Epha4|13838|Eph receptor A4
mm9_v1_chr2_+_106533615_106533705	8.41112	UGCAUAG	AK161666|Mpped2|77015|metallophosphoesterase domain containing 2	NM_001143683|Mpped2|77015|metallophosphoesterase domain containing 2	BC020182|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr7_-_28231535_28231646	8.20466	UGCAUAG	AK006254|Spnb4|80297|spectrin beta 4	AB055618|Spnb4|80297|spectrin beta 4	NM_032610|Spnb4|80297|spectrin beta 4	AK147558|Spnb4|80297|spectrin beta 4
mm9_v1_chr13_-_12199109_12199211	8.12818	UGCAUAG	BC043140|Ryr2|20191|ryanodine receptor 2, cardiac	BC059061|Ryr2|20191|ryanodine receptor 2, cardiac	NM_023868|Ryr2|20191|ryanodine receptor 2, cardiac
mm9_v1_chr4_-_75779379_75779379	7.87637	UGCAUAG	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr18_-_33623668_33623692	7.85384	UGCAUAG	NM_001109988|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr10_-_118677059_118677116	7.81045	UGCAUAG	AK129225|Cand1|71902|cullin associated and neddylation disassociated 1	AK144869|Cand1|71902|cullin associated and neddylation disassociated 1	AK158080|Cand1|71902|cullin associated and neddylation disassociated 1	NM_027994|Cand1|71902|cullin associated and neddylation disassociated 1
mm9_v1_chr4_-_76240202_76240202	7.74781	UGCAUAG	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr2_-_121632749_121632811	7.73417	UGCAUAG	AK054484|Frmd5|228564|FERM domain containing 5	BC062889|Frmd5|228564|FERM domain containing 5	AK146383|Frmd5|228564|FERM domain containing 5	AK048865|Frmd5|228564|FERM domain containing 5	NM_172673|Frmd5|228564|FERM domain containing 5
mm9_v1_chr18_+_37854011_37854154	7.7107	UGCAUAG	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr6_+_115084919_115085009	7.61801	UGCAUAG	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr18_-_33623400_33623430	7.51458	UGCAUAG	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr5_-_68238654_68238670	7.48846	UGCAUAG	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr6_-_91757386_91757427	7.44106	UGCAUAG	NM_001159507|Grip2|243547|glutamate receptor interacting protein 2
mm9_v1_chr5_+_107926763_107926815	7.43593	UGCAUAG	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr9_-_16182674_16182674	7.42388	UGCAUAG	NM_001080814|Fat3|270120|FAT tumor suppressor homolog 3 (Drosophila)
mm9_v1_chr18_+_37974732_37974732	7.19036	UGCAUAG	BC064808|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	NM_033582|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr2_+_76244578_76244594	7.09398	UGCAUAG	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr18_+_34380575_34380671	7.08742	UGCAUAG	AK042021|Apc|11789|adenomatosis polyposis coli	AK080907|Apc|11789|adenomatosis polyposis coli	NM_007462|Apc|11789|adenomatosis polyposis coli	AK046280|Apc|11789|adenomatosis polyposis coli	AK045053|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr2_+_3035629_3035684	6.98882	UGCAUAG	NM_001081161|Fam171a1|269233|family with sequence similarity 171, member A1	AK032237|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr18_+_37112301_37112419	6.94416	UGCAUAG	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr17_-_51971946_51971971	6.92547	UGCAUAG	AK088563|Satb1|20230|special AT-rich sequence binding protein 1	AK134040|Satb1|20230|special AT-rich sequence binding protein 1	U05252|Satb1|20230|special AT-rich sequence binding protein 1	AK037740|Satb1|20230|special AT-rich sequence binding protein 1	NM_009122|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr13_-_14615371_14615494	6.87409	UGCAUAG	AK051569|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK084246|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK086170|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK047678|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_001081348|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK053694|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr18_-_72510670_72510722	6.85182	UGCAUAG	AK157715|Dcc|13176|deleted in colorectal carcinoma	AK090377|Dcc|13176|deleted in colorectal carcinoma	NM_007831|Dcc|13176|deleted in colorectal carcinoma
mm9_v1_chr6_-_126690651_126690691	6.77021	UGCAUAG	NM_013568|Kcna6|16494|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm9_v1_chr7_+_98239230_98239295	6.71677	UGCAUAG	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr4_+_13711928_13711928	6.69397	UGCAUAG	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr4_+_155265932_155266005	6.64815	UGCAUAG	AK147505|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	BC067016|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	NM_207223|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
mm9_v1_chr10_-_49508472_49508559	6.53866	UGCAUAG	D10054|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	AK141539|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_001111268|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_010349|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm9_v1_chr7_+_53651811_53651938	6.40268	UGCAUAG	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr12_-_68323528_68323535	6.37728	UGCAUAG	AK034513|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	AK137667|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_001193266|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_207010|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2
mm9_v1_chr8_+_41509109_41509241	6.30988	UGCAUAG	AK030662|Zdhhc2|70546|zinc finger, DHHC domain containing 2	NM_178395|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK136296|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK046533|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK044652|Zdhhc2|70546|zinc finger, DHHC domain containing 2	BC117761|Zdhhc2|70546|zinc finger, DHHC domain containing 2	BC127156|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK018284|Zdhhc2|70546|zinc finger, DHHC domain containing 2
mm9_v1_chr3_-_38383688_38383798	6.28005	UGCAUAG	AK129484|Ankrd50|99696|ankyrin repeat domain 50	NM_001167883|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr6_-_119146426_119146446	6.21361	UGCAUAG	AK052162|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_009781|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr2_+_102546576_102546605	6.16975	UGCAUAG	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr7_+_127821093_127821157	6.16019	UGCAUAG	NM_001164580|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr6_+_8459595_8459595	6.09391	UGCAUAG	NM_133236|Glcci1|170772|glucocorticoid induced transcript 1
mm9_v1_chr17_-_51951378_51951378	5.98592	UGCAUAG	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chrX_+_133242520_133242603	5.89737	UGCAUAG	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr4_-_134989653_134989790	5.73622	UGCAUAG	AK042201|Rcan3|53902|regulator of calcineurin 3	AK155270|Rcan3|53902|regulator of calcineurin 3	NM_022980|Rcan3|53902|regulator of calcineurin 3	AK043916|Rcan3|53902|regulator of calcineurin 3
mm9_v1_chr5_+_54200858_54200899	5.68435	UGCAUAG	NM_144517|Tbc1d19|67249|TBC1 domain family, member 19	AK083084|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr18_-_33623069_33623089	5.66556	UGCAUAG	BC054762|D0H4S114|27528|DNA segment, human D4S114	NM_001109990|D0H4S114|27528|DNA segment, human D4S114	X70398|D0H4S114|27528|DNA segment, human D4S114	AK048361|D0H4S114|27528|DNA segment, human D4S114	AK081502|D0H4S114|27528|DNA segment, human D4S114	AK133769|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr11_-_30119771_30119771	5.66264	UGCAUAG	NM_175836|Spnb2|20742|spectrin beta 2
mm9_v1_chr18_-_33623287_33623340	5.60863	UGCAUAG	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr13_+_41345120_41345273	5.5203	UGCAUAG	NM_001135577|BC024659|108934|cDNA sequence BC024659	BC066054|BC024659|108934|cDNA sequence BC024659	BC094222|BC024659|108934|cDNA sequence BC024659
mm9_v1_chr2_-_65405546_65405588	5.49222	UGCAUAG	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr7_+_107855215_107855319	5.3975	UGCAUAG	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr6_-_119058206_119058206	5.29856	UGCAUAG	BC138031|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145103|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145104|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145105|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159533|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159534|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159535|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr10_+_39089594_39089612	5.27777	UGCAUAG	AK156584|Fyn|14360|Fyn proto-oncogene	AK171646|Fyn|14360|Fyn proto-oncogene	NM_001122892|Fyn|14360|Fyn proto-oncogene	NM_001122893|Fyn|14360|Fyn proto-oncogene	NM_008054|Fyn|14360|Fyn proto-oncogene	BC092217|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr2_-_120796395_120796492	5.18518	UGCAUAG	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr8_+_84239098_84239098	5.11459	UGCAUAG	BC064813|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II	NM_001024617|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II
mm9_v1_chrX_+_63902456_63902492	5.10012	UGCAUAG	NM_001161431|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr3_+_141128527_141128634	5.08648	UGCAUAG	NM_009472|Unc5c|22253|unc-5 homolog C (C. elegans)	U72634|Unc5c|22253|unc-5 homolog C (C. elegans)	BC115772|Unc5c|22253|unc-5 homolog C (C. elegans)	AK031655|Unc5c|22253|unc-5 homolog C (C. elegans)	AK034558|Unc5c|22253|unc-5 homolog C (C. elegans)	AK035038|Unc5c|22253|unc-5 homolog C (C. elegans)	AK045251|Unc5c|22253|unc-5 homolog C (C. elegans)	AK141181|Unc5c|22253|unc-5 homolog C (C. elegans)	AK142411|Unc5c|22253|unc-5 homolog C (C. elegans)	AK164239|Unc5c|22253|unc-5 homolog C (C. elegans)	AK142974|Unc5c|22253|unc-5 homolog C (C. elegans)
mm9_v1_chr4_+_104040160_104040194	5.02625	UGCAUAG	NM_010014|Dab1|13131|disabled homolog 1 (Drosophila)	NM_177259|Dab1|13131|disabled homolog 1 (Drosophila)	Y08379|Dab1|13131|disabled homolog 1 (Drosophila)	Y08380|Dab1|13131|disabled homolog 1 (Drosophila)	Y08381|Dab1|13131|disabled homolog 1 (Drosophila)
mm9_v1_chr18_-_21458623_21458645	5.00932	UGCAUAG	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr6_-_82889694_82889743	4.98801	UGCAUAG	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr5_-_123214252_123214302	4.98713	UGCAUAG	AF453383|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	BC023103|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_145358|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr17_+_3397206_3397287	4.92693	UGCAUAG	AB022915|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_011878|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK158137|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK129474|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr19_-_60019266_60019313	4.86891	UGCAUAG	AK154916|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001033172|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr9_-_86581204_86581205	4.86037	UGCAUAG	AK163278|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK163403|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_001198933|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr4_+_13670425_13670448	4.85298	UGCAUAG	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr11_+_98724908_98724950	4.84958	UGCAUAG	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr13_+_74146852_74146948	4.71846	UGCAUAG	NM_182839|Tppp|72948|tubulin polymerization promoting protein	AK141543|Tppp|72948|tubulin polymerization promoting protein	BC054803|Tppp|72948|tubulin polymerization promoting protein
mm9_v1_chr14_-_37748753_37748753	4.65665	UGCAUAG	AK005931|Gcap14|72972|granule cell antiserum positive 14	BC048641|Gcap14|72972|granule cell antiserum positive 14	BC060947|Gcap14|72972|granule cell antiserum positive 14	NM_028407|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr10_+_80755689_80755716	4.62929	UGCAUAG	AK154816|Pip5k1c|18717|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	AK170286|Pip5k1c|18717|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	NM_001146687|Pip5k1c|18717|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	NM_008844|Pip5k1c|18717|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm9_v1_chr17_+_3326513_3326683	4.62694	UGCAUAG	BC067048|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_001122998|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	BC079600|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr5_-_51945054_51945159	4.55969	UGCAUAG	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr19_-_60019520_60019556	4.55242	UGCAUAG	AK015534|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001164367|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr7_+_56214442_56214485	4.52229	UGCAUAG	AK019901|Nav2|78286|neuron navigator 2	NM_001111016|Nav2|78286|neuron navigator 2	AK084063|Nav2|78286|neuron navigator 2	AK162444|Nav2|78286|neuron navigator 2
mm9_v1_chr17_-_45686604_45686625	4.44421	UGCAUAG	BC079879|Tmem151b|210573|transmembrane protein 151B	NM_001013749|Tmem151b|210573|transmembrane protein 151B
mm9_v1_chr11_+_117515548_117515602	4.42101	UGCAUAG	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr2_+_107130745_107130810	4.27257	UGCAUAG	NM_021275|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4	AK036112|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4
mm9_v1_chr16_-_65105465_65105679	4.26585	UGCAUAG	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chr1_+_63492447_63492511	4.26374	UGCAUAG	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr4_+_32504409_32504501	4.26366	UGCAUAG	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr10_-_30562434_30562625	4.12537	UGCAUAG	AK031506|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AB093589|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103575|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105651|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103576|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105652|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF173902|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF232240|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AK158000|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF172287|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AJ271867|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	NM_013904|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2
mm9_v1_chr16_-_37385024_37385045	4.08429	UGCAUAG	AK043658|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114611|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114612|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114613|Stxbp5l|207227|syntaxin binding protein 5-like	NM_172440|Stxbp5l|207227|syntaxin binding protein 5-like
mm9_v1_chr11_+_75007475_75007498	4.04249	UGCAUAG	AK140456|Rtn4rl1|237847|reticulon 4 receptor-like 1	NM_177708|Rtn4rl1|237847|reticulon 4 receptor-like 1	AK033286|Rtn4rl1|237847|reticulon 4 receptor-like 1
mm9_v1_chr3_+_55046447_55046542	4.03085	UGCAUAG	AK147831|Dclk1|13175|doublecortin-like kinase 1	NM_001111053|Dclk1|13175|doublecortin-like kinase 1	NM_001195538|Dclk1|13175|doublecortin-like kinase 1	NM_019978|Dclk1|13175|doublecortin-like kinase 1	AB093234|Dclk1|13175|doublecortin-like kinase 1	AK164993|Dclk1|13175|doublecortin-like kinase 1	AF155820|Dclk1|13175|doublecortin-like kinase 1	BC064783|Dclk1|13175|doublecortin-like kinase 1	BC021354|Dclk1|13175|doublecortin-like kinase 1	AK043874|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr3_-_120966206_120966262	4.0051	UGCAUAG	BC040365|Tmem56|99887|transmembrane protein 56	NM_178936|Tmem56|99887|transmembrane protein 56	AK149544|Tmem56|99887|transmembrane protein 56
mm9_v1_chr10_-_59414516_59414582	3.95486	UGCAUAG	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr10_-_22451211_22451252	3.92494	UGCAUAG	NM_011603|Tbpl1|237336|TATA box binding protein-like 1
mm9_v1_chr15_-_96473193_96473343	3.8671	UGCAUAG	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr17_+_25359526_25359671	3.83411	UGCAUAG	AK004898|Unkl|74154|unkempt-like (Drosophila)	NM_028789|Unkl|74154|unkempt-like (Drosophila)	BC150842|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chrX_+_90920450_90920749	3.80643	UGCAUAG	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr2_-_37298623_37298690	3.79273	UGCAUAG	BC109349|Zbtb26|320633|zinc finger and BTB domain containing 26	BC109350|Zbtb26|320633|zinc finger and BTB domain containing 26	AK044592|Zbtb26|320633|zinc finger and BTB domain containing 26	BC060655|Zbtb26|320633|zinc finger and BTB domain containing 26	NM_199025|Zbtb26|320633|zinc finger and BTB domain containing 26	AK166126|Zbtb26|320633|zinc finger and BTB domain containing 26
mm9_v1_chr10_-_94879435_94879509	3.70525	UGCAUAG	AK160537|Socs2|216233|suppressor of cytokine signaling 2	AK162591|Socs2|216233|suppressor of cytokine signaling 2	BC106153|Socs2|216233|suppressor of cytokine signaling 2	NM_007706|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr15_-_96472392_96472392	3.69969	UGCAUAG	AK034130|Slc38a1|105727|solute carrier family 38, member 1	NM_134086|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr18_+_37249789_37249789	3.60569	UGCAUAG	AY013768|Pcdhac1|353236|protocadherin alpha subfamily C, 1	NM_001003671|Pcdhac1|353236|protocadherin alpha subfamily C, 1
mm9_v1_chr2_+_37298785_37298902	3.59401	UGCAUAG	NM_146121|Rabgap1|227800|RAB GTPase activating protein 1	AK031315|Rabgap1|227800|RAB GTPase activating protein 1	AK021286|Rabgap1|227800|RAB GTPase activating protein 1	BC138337|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr3_+_97462134_97462247	3.58032	UGCAUAG	BC060228|Prkab2|108097|protein kinase, AMP-activated, beta 2 non-catalytic subunit	NM_182997|Prkab2|108097|protein kinase, AMP-activated, beta 2 non-catalytic subunit
mm9_v1_chr9_+_74885522_74885560	3.57826	UGCAUAG	BC040206|Arpp19|59046|cAMP-regulated phosphoprotein 19	NM_021548|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr10_-_94878117_94878117	3.56481	UGCAUAG	NM_001168656|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr12_+_16901671_16901783	3.52834	UGCAUAG	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr8_+_63134353_63134353	3.51297	UGCAUAG	AK016959|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177882|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr2_-_7002344_7002370	3.46619	UGCAUAG	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr8_+_63133900_63133900	3.4408	UGCAUAG	AK133407|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177881|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr9_+_74885420_74885510	3.41136	UGCAUAG	NM_001142655|Arpp19|59046|cAMP-regulated phosphoprotein 19	AK076052|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr7_+_51846254_51846289	3.37797	UGCAUAG	NM_008422|Kcnc3|16504|potassium voltage gated channel, Shaw-related subfamily, member 3
mm9_v1_chr17_+_42452895_42453084	3.37484	UGCAUAG	NM_028474|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	AK014270|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	BC145294|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene
mm9_v1_chr13_+_55050729_55050861	3.30942	UGCAUAG	BC058084|Unc5a|107448|unc-5 homolog A (C. elegans)	AJ487852|Unc5a|107448|unc-5 homolog A (C. elegans)	NM_153131|Unc5a|107448|unc-5 homolog A (C. elegans)
mm9_v1_chr9_+_74823917_74823980	3.27322	UGCAUAG	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr5_+_34916343_34916517	3.26787	UGCAUAG	NM_001024458|Add1|11518|adducin 1 (alpha)	NM_001102444|Add1|11518|adducin 1 (alpha)	NM_013457|Add1|11518|adducin 1 (alpha)	AF096839|Add1|11518|adducin 1 (alpha)	AK079960|Add1|11518|adducin 1 (alpha)	AK054558|Add1|11518|adducin 1 (alpha)
mm9_v1_chr9_+_74800828_74800859	3.26506	UGCAUAG	BC060215|BC031353|235493|cDNA sequence BC031353	NM_001113283|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr4_+_57580989_57581153	3.23927	UGCAUAG	AK045344|Palm2|242481|paralemmin 2	NM_172868|Palm2|242481|paralemmin 2	BC113156|Palm2|242481|paralemmin 2
mm9_v1_chr10_-_94877824_94877916	3.22523	UGCAUAG	U88327|Socs2|216233|suppressor of cytokine signaling 2	NM_001168657|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr7_+_129432585_129432762	3.15618	UGCAUAG	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr6_+_86354212_86354404	3.1281	UGCAUAG	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr10_-_12581443_12581532	3.09261	UGCAUAG	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr2_-_5635547_5635807	3.0864	UGCAUAG	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr4_+_32744074_32744093	2.88004	UGCAUAG	AK144722|Mdn1|100019|midasin homolog (yeast)	NM_001081392|Mdn1|100019|midasin homolog (yeast)
mm9_v1_chr17_+_25325344_25325353	2.86344	UGCAUAG	NM_001197024|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr5_-_110877489_110877534	2.80854	UGCAUAG	BC059932|Fbrsl1|381668|fibrosin-like 1	NM_001142642|Fbrsl1|381668|fibrosin-like 1
mm9_v1_chr11_-_29925939_29926032	2.78479	UGCAUAG	AK049034|Eml6|237711|echinoderm microtubule associated protein like 6	NM_146016|Eml6|237711|echinoderm microtubule associated protein like 6
mm9_v1_chr9_+_58430031_58430196	2.78023	UGCAUAG	NM_009145|Nptn|20320|neuroplastin	BC039191|Nptn|20320|neuroplastin
mm9_v1_chrX_+_90900201_90900217	2.76939	UGCAUAG	AK149304|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189950|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	NM_177546|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK053577|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr5_-_46030523_46030852	2.75895	UGCAUAG	AK081567|Fam184b|58227|family with sequence similarity 184, member B	BC056379|Fam184b|58227|family with sequence similarity 184, member B	NM_021416|Fam184b|58227|family with sequence similarity 184, member B	AB257856|Fam184b|58227|family with sequence similarity 184, member B
mm9_v1_chr10_-_85961630_85961659	2.70823	UGCAUAG	AK043854|Syn3|27204|synapsin III	AK087342|Syn3|27204|synapsin III	NM_001164495|Syn3|27204|synapsin III	NM_013722|Syn3|27204|synapsin III
mm9_v1_chr12_+_79327630_79327650	2.69102	UGCAUAG	AK144569|Gphn|268566|gephyrin	NM_145965|Gphn|268566|gephyrin	NM_172952|Gphn|268566|gephyrin
mm9_v1_chr3_+_55265654_55265683	2.6532	UGCAUAG	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr19_+_18787654_18787754	2.51536	UGCAUAG	AK145019|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK155389|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK083631|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	NM_177640|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	BC020125|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene
mm9_v1_chr5_-_143942408_143942453	2.50296	UGCAUAG	AF226870|Rbak|57782|RB-associated KRAB repressor	NM_001045482|Rbak|57782|RB-associated KRAB repressor	NM_021326|Rbak|57782|RB-associated KRAB repressor	AK051009|Rbak|57782|RB-associated KRAB repressor
mm9_v1_chr5_+_31014229_31014273	2.49766	UGCAUAG	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr16_+_20589654_20589675	2.37943	UGCAUAG	AK141799|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_001144953|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_182636|Vwa5b2|328643|von Willebrand factor A domain containing 5B2
mm9_v1_chr11_+_97311458_97311517	2.37413	UGCAUAG	NM_021493|Arhgap23|58996|Rho GTPase activating protein 23
mm9_v1_chr2_+_76513326_76513402	2.36157	UGCAUAG	BC031110|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	NM_031256|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm9_v1_chr1_+_134373910_134373945	2.35693	UGCAUAG	AK171177|Rbbp5|213464|retinoblastoma binding protein 5	AK154782|Rbbp5|213464|retinoblastoma binding protein 5	NM_172517|Rbbp5|213464|retinoblastoma binding protein 5	AK170520|Rbbp5|213464|retinoblastoma binding protein 5
mm9_v1_chr18_+_37170365_37170627	2.31993	UGCAUAG	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr11_+_6963421_6963491	2.31049	UGCAUAG	NM_009622|Adcy1|432530|adenylate cyclase 1
mm9_v1_chr3_-_69663781_69663817	2.28068	UGCAUAG	AK009973|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	BC022628|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AF365876|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK004017|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK010117|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_001164210|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_133675|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene
mm9_v1_chr1_+_193542261_193542399	2.25176	UGCAUAG	NM_001134829|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	AK172914|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	BC013667|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr10_+_62442963_62442971	2.24714	UGCAUAG	AK045485|Rufy2|70432|RUN and FYVE domain-containing 2	NM_027425|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chr9_-_57315800_57315896	2.22225	UGCAUAG	AF241833|Scamp5|56807|secretory carrier membrane protein 5	BC018613|Scamp5|56807|secretory carrier membrane protein 5	NM_020270|Scamp5|56807|secretory carrier membrane protein 5
mm9_v1_chr4_-_128639595_128639690	2.19843	UGCAUAG	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr9_-_105397342_105397452	2.15393	UGCAUAG	AK032255|Atp2c1|235574|ATPase, Ca++-sequestering	AK028393|Atp2c1|235574|ATPase, Ca++-sequestering	BC043706|Atp2c1|235574|ATPase, Ca++-sequestering	AK159918|Atp2c1|235574|ATPase, Ca++-sequestering	AK163049|Atp2c1|235574|ATPase, Ca++-sequestering	BC043091|Atp2c1|235574|ATPase, Ca++-sequestering	AK052958|Atp2c1|235574|ATPase, Ca++-sequestering	NM_175025|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr1_-_137481914_137481937	2.14378	UGCAUAG	NM_173437|Nav1|215690|neuron navigator 1
mm9_v1_chr8_+_24085309_24085353	2.13579	UGCAUAG	AK158131|Ank1|11733|ankyrin 1, erythroid	AK147278|Ank1|11733|ankyrin 1, erythroid	NM_001110783|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr1_-_58561631_58561830	2.13008	UGCAUAG	BC015257|Orc2|18393|origin recognition complex, subunit 2	NM_008765|Orc2|18393|origin recognition complex, subunit 2	U27457|Orc2|18393|origin recognition complex, subunit 2	AK048408|Orc2|18393|origin recognition complex, subunit 2	AK133604|Orc2|18393|origin recognition complex, subunit 2	AK146281|Orc2|18393|origin recognition complex, subunit 2	AK146859|Orc2|18393|origin recognition complex, subunit 2	AK051747|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr7_+_133991066_133991211	2.12646	UGCAUAG	BC055768|Doc2a|13446|double C2, alpha	NM_010069|Doc2a|13446|double C2, alpha
mm9_v1_chr8_-_72963464_72963487	2.11794	UGCAUAG	AK129173|Crtc1|382056|CREB regulated transcription coactivator 1	BC080308|Crtc1|382056|CREB regulated transcription coactivator 1	NM_001004062|Crtc1|382056|CREB regulated transcription coactivator 1	BC056137|Crtc1|382056|CREB regulated transcription coactivator 1	BC068139|Crtc1|382056|CREB regulated transcription coactivator 1
mm9_v1_chr1_-_80210403_80210518	2.10763	UGCAUAG	BC150872|Fam124b|241128|family with sequence similarity 124, member B	AK043867|Fam124b|241128|family with sequence similarity 124, member B	NM_173425|Fam124b|241128|family with sequence similarity 124, member B
mm9_v1_chr9_-_86589782_86589994	2.10301	UGCAUAG	M26756|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC094028|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC080660|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC003287|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK004980|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK077968|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	J02652|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC011081|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_008615|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr6_-_94233855_94233910	2.10262	UGCAUAG	AK046635|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC095943|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001029850|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_010367|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK147358|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr1_+_193541845_193542002	2.04296	UGCAUAG	AK133814|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	NM_172266|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr8_+_24168730_24168785	2.03799	UGCAUAG	AK147483|Ank1|11733|ankyrin 1, erythroid	NM_031158|Ank1|11733|ankyrin 1, erythroid	X69063|Ank1|11733|ankyrin 1, erythroid	AK147597|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr10_-_120748244_120748244	2.01116	UGCAUAG	NM_029057|Tbc1d30|74694|TBC1 domain family, member 30
mm9_v1_chr7_+_104728398_104728430	2.00126	UGCAUAG	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr16_-_91044623_91044646	1.98409	UGCAUAG	NM_026110|Gcfc1|67367|GC-rich sequence DNA-binding factor 1
mm9_v1_chr18_+_37164856_37165092	1.97763	UGCAUAG	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr12_-_28027541_28027588	1.97052	UGCAUAG	AK146514|Sox11|20666|SRY-box containing gene 11	AF009414|Sox11|20666|SRY-box containing gene 11	BC078643|Sox11|20666|SRY-box containing gene 11	AK165693|Sox11|20666|SRY-box containing gene 11	AK165005|Sox11|20666|SRY-box containing gene 11	NM_009234|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr8_+_119682034_119682036	1.95711	UGCAUAG	NM_001081151|Gan|209239|giant axonal neuropathy	BC112432|Gan|209239|giant axonal neuropathy	AK039455|Gan|209239|giant axonal neuropathy
mm9_v1_chr5_+_114830615_114830615	1.92905	UGCAUAG	NM_054093|Ube3b|117146|ubiquitin protein ligase E3B
mm9_v1_chr4_-_82151180_82151288	1.91399	UGCAUAG	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr13_-_102538106_102538184	1.88345	UGCAUAG	M60651|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	U50413|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	BC026146|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK160493|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK171366|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001077495|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr3_+_32428382_32428415	1.85179	UGCAUAG	AK141611|Mfn1|67414|mitofusin 1	NM_024200|Mfn1|67414|mitofusin 1	AK018181|Mfn1|67414|mitofusin 1	AK220169|Mfn1|67414|mitofusin 1
mm9_v1_chr2_+_32390780_32390878	1.84454	UGCAUAG	AK131145|Fam102a|98952|family with sequence similarity 102, member A	AK170536|Fam102a|98952|family with sequence similarity 102, member A	AK049032|Fam102a|98952|family with sequence similarity 102, member A	NM_153560|Fam102a|98952|family with sequence similarity 102, member A
mm9_v1_chr7_-_73834420_73834446	1.83951	UGCAUAG	BC085155|Asb7|117589|ankyrin repeat and SOCS box-containing 7	NM_080443|Asb7|117589|ankyrin repeat and SOCS box-containing 7
mm9_v1_chr8_-_108020769_108020996	1.82815	UGCAUAG	AK038593|Zdhhc1|70796|zinc finger, DHHC domain containing 1	NM_175160|Zdhhc1|70796|zinc finger, DHHC domain containing 1
mm9_v1_chr6_-_93863547_93863683	1.79441	UGCAUAG	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr12_+_30622876_30622919	1.79222	UGCAUAG	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr8_-_124175827_124175832	1.75939	UGCAUAG	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr10_-_129717244_129717295	1.74126	UGCAUAG	BC042639|Neurod4|11923|neurogenic differentiation 4	AK012183|Neurod4|11923|neurogenic differentiation 4	BC054391|Neurod4|11923|neurogenic differentiation 4	NM_007501|Neurod4|11923|neurogenic differentiation 4
mm9_v1_chr4_-_57314708_57314708	1.73259	UGCAUAG	AK052928|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3	NM_011207|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3
mm9_v1_chrX_+_65931715_65931923	1.71976	UGCAUAG	AK053829|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	BC079671|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	NM_008031|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK140343|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK046605|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK053701|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080898|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080948|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	L23971|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr9_+_94570310_94570389	1.71742	UGCAUAG	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr16_-_94509462_94509462	1.71117	UGCAUAG	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr7_+_56501558_56501558	1.66701	UGCAUAG	AK039374|Nav2|78286|neuron navigator 2	NM_175272|Nav2|78286|neuron navigator 2
mm9_v1_chr4_+_106584074_106584164	1.66685	UGCAUAG	AK017711|Ssbp3|72475|single-stranded DNA binding protein 3	NM_023672|Ssbp3|72475|single-stranded DNA binding protein 3	NM_198438|Ssbp3|72475|single-stranded DNA binding protein 3	AK011853|Ssbp3|72475|single-stranded DNA binding protein 3	BC035475|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr12_-_40764554_40764600	1.58826	UGCAUAG	NM_001039515|Arl4a|11861|ADP-ribosylation factor-like 4A	AK161281|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr2_+_156022382_156022502	1.5826	UGCAUAG	NM_172674|Phf20|228829|PHD finger protein 20	AK045309|Phf20|228829|PHD finger protein 20	AK033017|Phf20|228829|PHD finger protein 20	AK038573|Phf20|228829|PHD finger protein 20	AK142424|Phf20|228829|PHD finger protein 20	BC060121|Phf20|228829|PHD finger protein 20
mm9_v1_chr2_+_21289168_21289199	1.536	UGCAUAG	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr9_-_31019392_31019409	1.51486	UGCAUAG	AK013376|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	Z27070|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK149977|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK150020|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK087459|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	AK160471|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_001102455|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_001102456|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	NM_009691|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	Z22592|Aplp2|11804|amyloid beta (A4) precursor-like protein 2
mm9_v1_chr12_-_101963226_101963268	1.49038	UGCAUAG	AY341873|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	AY341881|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	BC035298|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	NM_153587|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr5_-_144031666_144031702	1.48372	UGCAUAG	NM_017467|Zfp316|54201|zinc finger protein 316
mm9_v1_chr11_-_86570918_86571097	1.47744	UGCAUAG	AK158438|Cltc|67300|clathrin, heavy polypeptide (Hc)	BC079897|Cltc|67300|clathrin, heavy polypeptide (Hc)	NM_001003908|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK171732|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK156869|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr2_+_48669628_48669670	1.47451	UGCAUAG	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr1_-_108656198_108656318	1.4703	UGCAUAG	AK170064|Kdsr|70750|3-ketodihydrosphingosine reductase	AY634684|Kdsr|70750|3-ketodihydrosphingosine reductase	AK018155|Kdsr|70750|3-ketodihydrosphingosine reductase	BC023820|Kdsr|70750|3-ketodihydrosphingosine reductase	NM_027534|Kdsr|70750|3-ketodihydrosphingosine reductase
mm9_v1_chr1_-_54251877_54252011	1.43205	UGCAUAG	AK042922|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_001001883|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_172655|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AK047602|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm9_v1_chr5_-_31395853_31395951	1.39337	UGCAUAG	U76007|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	AK165796|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	BC066199|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	AK144568|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	NM_011773|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3
mm9_v1_chrX_+_63906333_63906333	1.38512	UGCAUAG	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr4_+_54960816_54960816	1.33348	UGCAUAG	NM_172867|Zfp462|242466|zinc finger protein 462
mm9_v1_chr10_-_94878845_94878845	1.3103	UGCAUAG	NM_001168655|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr14_-_27783615_27783757	1.30201	UGCAUAG	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr10_-_80889856_80889928	1.29754	UGCAUAG	U57635|Nfic|18029|nuclear factor I/C	Y07692|Nfic|18029|nuclear factor I/C	AK087539|Nfic|18029|nuclear factor I/C	AK147496|Nfic|18029|nuclear factor I/C	AK155258|Nfic|18029|nuclear factor I/C	NM_008688|Nfic|18029|nuclear factor I/C	NM_026756|Nfic|18029|nuclear factor I/C
mm9_v1_chr8_+_119873069_119873069	1.21629	UGCAUAG	AK016712|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene	NM_028941|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr2_-_7317513_7317626	1.16948	UGCAUAG	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr15_+_6658368_6658402	1.15636	UGCAUAG	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr10_-_116585527_116585608	1.14569	UGCAUAG	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr9_-_21397188_21397310	1.12752	UGCAUAG	BC002282|Yipf2|74766|Yip1 domain family, member 2	NM_138303|Yipf2|74766|Yip1 domain family, member 2	BC003289|Yipf2|74766|Yip1 domain family, member 2	AK033705|Yipf2|74766|Yip1 domain family, member 2	AK133631|Yipf2|74766|Yip1 domain family, member 2	AK004959|Yipf2|74766|Yip1 domain family, member 2
mm9_v1_chr6_+_95067873_95067899	1.12256	UGCAUAG	AK142080|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001008785|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001102670|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8
mm9_v1_chr5_+_89316245_89316323	1.12003	UGCAUAG	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr9_+_48793454_48793577	1.09095	UGCAUAG	NM_175482|Usp28|235323|ubiquitin specific peptidase 28	AK166511|Usp28|235323|ubiquitin specific peptidase 28	BC066033|Usp28|235323|ubiquitin specific peptidase 28	BC088733|Usp28|235323|ubiquitin specific peptidase 28
mm9_v1_chr10_-_70700764_70701027	1.07104	UGCAUAG	U57939|Tfam|21780|transcription factor A, mitochondrial	AK004857|Tfam|21780|transcription factor A, mitochondrial	BC001987|Tfam|21780|transcription factor A, mitochondrial	BC083084|Tfam|21780|transcription factor A, mitochondrial	AK050446|Tfam|21780|transcription factor A, mitochondrial	AK167348|Tfam|21780|transcription factor A, mitochondrial	NM_009360|Tfam|21780|transcription factor A, mitochondrial	AK163563|Tfam|21780|transcription factor A, mitochondrial	AK017974|Tfam|21780|transcription factor A, mitochondrial	AK161747|Tfam|21780|transcription factor A, mitochondrial	AK167777|Tfam|21780|transcription factor A, mitochondrial	AK169808|Tfam|21780|transcription factor A, mitochondrial	U63859|Tfam|21780|transcription factor A, mitochondrial	U63858|Tfam|21780|transcription factor A, mitochondrial	U63712|Tfam|21780|transcription factor A, mitochondrial
mm9_v1_chr5_-_107125783_107125868	1.06596	UGCAUAG	AK053146|Zfp644|52397|zinc finger protein 644	NM_026856|Zfp644|52397|zinc finger protein 644
mm9_v1_chr14_-_37781943_37781973	1.00952	UGCAUAG	AK147383|Gcap14|72972|granule cell antiserum positive 14	NM_027045|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chrX_+_82819294_82819360	0.998596	UGCAUAG	AK220185|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3	NM_025729|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm9_v1_chr15_-_103070227_103070257	0.986437	UGCAUAG	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr4_+_125168074_125168079	0.979574	UGCAUAG	NM_001081097|Grik3|14807|glutamate receptor, ionotropic, kainate 3	BC118004|Grik3|14807|glutamate receptor, ionotropic, kainate 3
mm9_v1_chr10_-_79565387_79565472	0.97211	UGCAUAG	BC019206|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK043861|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK155462|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK155674|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	BC056369|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	NM_183426|Sbno2|216161|strawberry notch homolog 2 (Drosophila)
mm9_v1_chr5_+_111308801_111308858	0.95834	UGCAUAG	NM_024477|Ttc28|209683|tetratricopeptide repeat domain 28	AK009368|Ttc28|209683|tetratricopeptide repeat domain 28
mm9_v1_chrX_+_157600681_157600703	0.957771	UGCAUAG	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr14_-_65881225_65881304	0.923344	UGCAUAG	BC066186|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC103714|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK134261|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK160554|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC050965|Fzd3|14365|frizzled homolog 3 (Drosophila)	NM_021458|Fzd3|14365|frizzled homolog 3 (Drosophila)
mm9_v1_chr9_+_96096690_96096766	0.91395	UGCAUAG	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr11_-_53113895_53113995	0.912308	UGCAUAG	AK155305|Hspa4|15525|heat shock protein 4	AK053601|Hspa4|15525|heat shock protein 4	AK054010|Hspa4|15525|heat shock protein 4	AK133772|Hspa4|15525|heat shock protein 4	AK220167|Hspa4|15525|heat shock protein 4	AK143543|Hspa4|15525|heat shock protein 4	AK171940|Hspa4|15525|heat shock protein 4	AK166102|Hspa4|15525|heat shock protein 4	NM_008300|Hspa4|15525|heat shock protein 4
mm9_v1_chr12_-_32746061_32746210	0.911151	UGCAUAG	BC048710|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK011647|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK138963|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK041013|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK135621|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	NM_011158|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta
mm9_v1_chrX_+_70587906_70588053	0.861989	UGCAUAG	NM_031494|Zfp275|27081|zinc finger protein 275	AK142957|Zfp275|27081|zinc finger protein 275	NM_001160229|Zfp275|27081|zinc finger protein 275	BC138002|Zfp275|27081|zinc finger protein 275	BC138003|Zfp275|27081|zinc finger protein 275
mm9_v1_chr16_+_56075506_56075529	0.854122	UGCAUAG	AK040314|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003971|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003972|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003973|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_025483|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr2_-_120434984_120435243	0.848491	UGCAUAG	AK003592|Lrrc57|66606|leucine rich repeat containing 57	AK169249|Lrrc57|66606|leucine rich repeat containing 57	BC034894|Lrrc57|66606|leucine rich repeat containing 57	AK003037|Lrrc57|66606|leucine rich repeat containing 57	NM_025657|Lrrc57|66606|leucine rich repeat containing 57	AK012637|Lrrc57|66606|leucine rich repeat containing 57	AK033084|Lrrc57|66606|leucine rich repeat containing 57	AK134971|Lrrc57|66606|leucine rich repeat containing 57	NM_001159612|Lrrc57|66606|leucine rich repeat containing 57	AK015684|Lrrc57|66606|leucine rich repeat containing 57	AK019566|Lrrc57|66606|leucine rich repeat containing 57	NM_001159609|Lrrc57|66606|leucine rich repeat containing 57	NM_001159610|Lrrc57|66606|leucine rich repeat containing 57
mm9_v1_chr11_-_98190774_98191090	0.836638	UGCAUAG	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr13_+_83643032_83643032	0.799126	UGCAUAG	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr7_+_120657336_120657425	0.794922	UGCAUAG	AK005531|Far1|67420|fatty acyl CoA reductase 1	AK014405|Far1|67420|fatty acyl CoA reductase 1	AK011187|Far1|67420|fatty acyl CoA reductase 1	AK014486|Far1|67420|fatty acyl CoA reductase 1	NM_026143|Far1|67420|fatty acyl CoA reductase 1	NM_027379|Far1|67420|fatty acyl CoA reductase 1	BC007178|Far1|67420|fatty acyl CoA reductase 1	AK033674|Far1|67420|fatty acyl CoA reductase 1	AK030067|Far1|67420|fatty acyl CoA reductase 1
mm9_v1_chr7_-_145589409_145589421	0.699338	UGCAUAG	AK017700|Tcerg1l|70571|transcription elongation regulator 1-like	NM_183289|Tcerg1l|70571|transcription elongation regulator 1-like
mm9_v1_chr8_+_63111621_63111675	0.691084	UGCAUAG	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr4_-_4720451_4720507	0.685245	UGCAUAG	BC048776|Impad1|242291|inositol monophosphatase domain containing 1	NM_177730|Impad1|242291|inositol monophosphatase domain containing 1	AK045511|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr2_+_58998885_58998932	0.676568	UGCAUAG	AK146720|Pkp4|227937|plakophilin 4	NM_026361|Pkp4|227937|plakophilin 4	NM_175464|Pkp4|227937|plakophilin 4
mm9_v1_chr2_+_25036276_25036300	0.669788	UGCAUAG	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr15_-_96472600_96472827	0.597694	UGCAUAG	AK040250|Slc38a1|105727|solute carrier family 38, member 1	AK029189|Slc38a1|105727|solute carrier family 38, member 1	BC066815|Slc38a1|105727|solute carrier family 38, member 1	BC030378|Slc38a1|105727|solute carrier family 38, member 1	AK049173|Slc38a1|105727|solute carrier family 38, member 1	AK050914|Slc38a1|105727|solute carrier family 38, member 1	AK082683|Slc38a1|105727|solute carrier family 38, member 1	NM_001166456|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr6_-_72389491_72389552	0.587594	UGCAUAG	BC003451|Mat2a|232087|methionine adenosyltransferase II, alpha	AB070266|Mat2a|232087|methionine adenosyltransferase II, alpha	BC058360|Mat2a|232087|methionine adenosyltransferase II, alpha	AK145407|Mat2a|232087|methionine adenosyltransferase II, alpha	AK052764|Mat2a|232087|methionine adenosyltransferase II, alpha	AK133960|Mat2a|232087|methionine adenosyltransferase II, alpha	AK144189|Mat2a|232087|methionine adenosyltransferase II, alpha	AK150040|Mat2a|232087|methionine adenosyltransferase II, alpha	AK151281|Mat2a|232087|methionine adenosyltransferase II, alpha	AK160869|Mat2a|232087|methionine adenosyltransferase II, alpha	AK161852|Mat2a|232087|methionine adenosyltransferase II, alpha	AK164137|Mat2a|232087|methionine adenosyltransferase II, alpha	AK166671|Mat2a|232087|methionine adenosyltransferase II, alpha	AK168155|Mat2a|232087|methionine adenosyltransferase II, alpha	AK169705|Mat2a|232087|methionine adenosyltransferase II, alpha	AK034757|Mat2a|232087|methionine adenosyltransferase II, alpha	NM_145569|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr3_+_52845429_52845504	0.587204	UGCAUAG	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr2_-_7317824_7317824	0.560328	UGCAUAG	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr18_+_69505374_69505487	0.541931	UGCAUAG	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr13_-_24372584_24372663	0.541586	UGCAUAG	BC150819|Lrrc16a|68732|leucine rich repeat containing 16A	AK051570|Lrrc16a|68732|leucine rich repeat containing 16A	NM_026825|Lrrc16a|68732|leucine rich repeat containing 16A	AY437876|Lrrc16a|68732|leucine rich repeat containing 16A
mm9_v1_chr2_+_179177132_179177182	0.541411	UGCAUAG	BC047991|Cdh4|12561|cadherin 4	NM_009867|Cdh4|12561|cadherin 4
mm9_v1_chr4_-_142802606_142802625	0.532389	UGCAUAG	AK087820|Prdm2|110593|PR domain containing 2, with ZNF domain	NM_001081355|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr3_-_19164956_19164968	0.524503	UGCAUAG	U68171|Pde7a|18583|phosphodiesterase 7A	AK168957|Pde7a|18583|phosphodiesterase 7A	NM_008802|Pde7a|18583|phosphodiesterase 7A
mm9_v1_chr11_+_85124739_85124974	0.514314	UGCAUAG	BC051966|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	NM_016910|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK157818|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK166632|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK171714|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK051509|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK050831|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	BC023492|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AK053727|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform	AF200464|Ppm1d|53892|protein phosphatase 1D magnesium-dependent, delta isoform
mm9_v1_chr14_+_9046655_9046821	0.514054	UGCAUAG	AK082924|Kctd6|71393|potassium channel tetramerisation domain containing 6	AK017384|Kctd6|71393|potassium channel tetramerisation domain containing 6	NM_027782|Kctd6|71393|potassium channel tetramerisation domain containing 6	BC096370|Kctd6|71393|potassium channel tetramerisation domain containing 6
mm9_v1_chr12_+_112404645_112404765	0.505385	UGCAUAG	AK147304|Traf3|22031|TNF receptor-associated factor 3	NM_001048206|Traf3|22031|TNF receptor-associated factor 3	NM_011632|Traf3|22031|TNF receptor-associated factor 3	U21050|Traf3|22031|TNF receptor-associated factor 3
mm9_v1_chr7_+_130267398_130267398	0.493922	UGCAUAG	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr11_-_100511964_100512006	0.485383	UGCAUAG	BC116726|Zfp385c|278304|zinc finger protein 385C	AK044299|Zfp385c|278304|zinc finger protein 385C	NM_177790|Zfp385c|278304|zinc finger protein 385C
mm9_v1_chr6_-_86683330_86683393	0.465458	UGCAUAG	BC054767|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK146964|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK004716|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK155238|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	NM_011818|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)
mm9_v1_chr12_-_81537525_81537603	0.420898	UGCAUAG	BC046813|Dcaf5|320808|DDB1 and CUL4 associated factor 5	AK165096|Dcaf5|320808|DDB1 and CUL4 associated factor 5	AK137579|Dcaf5|320808|DDB1 and CUL4 associated factor 5	NM_177267|Dcaf5|320808|DDB1 and CUL4 associated factor 5
mm9_v1_chr11_+_45869473_45869501	0.400645	UGCAUAG	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr17_+_8476638_8476687	0.318856	UGCAUAG	AK170514|Brp44l|55951|brain protein 44-like	BC103767|Brp44l|55951|brain protein 44-like	AK002241|Brp44l|55951|brain protein 44-like	AK013391|Brp44l|55951|brain protein 44-like	NM_018819|Brp44l|55951|brain protein 44-like	AK005348|Brp44l|55951|brain protein 44-like
mm9_v1_chr3_+_122432075_122432112	0.303311	UGCAUAG	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr5_+_108494692_108494781	0.296179	UGCAUAG	AK031409|Mtf2|17765|metal response element binding transcription factor 2	BC024889|Mtf2|17765|metal response element binding transcription factor 2	AK032798|Mtf2|17765|metal response element binding transcription factor 2	AK032819|Mtf2|17765|metal response element binding transcription factor 2	AK137539|Mtf2|17765|metal response element binding transcription factor 2	BC050826|Mtf2|17765|metal response element binding transcription factor 2	AK030752|Mtf2|17765|metal response element binding transcription factor 2	AB050541|Mtf2|17765|metal response element binding transcription factor 2	BC092237|Mtf2|17765|metal response element binding transcription factor 2	NM_013827|Mtf2|17765|metal response element binding transcription factor 2	BC100340|Mtf2|17765|metal response element binding transcription factor 2	BC029076|Mtf2|17765|metal response element binding transcription factor 2
mm9_v1_chr6_-_55631256_55631256	0.245995	UGCAUAG	AK144360|Neurod6|11922|neurogenic differentiation 6	NM_009717|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr11_+_51577152_51577250	0.243189	UGCAUAG	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chr9_+_59426108_59426143	0.238798	UGCAUAG	BC052406|Celf6|76183|CUGBP, Elav-like family member 6	NM_175235|Celf6|76183|CUGBP, Elav-like family member 6
mm9_v1_chr2_+_155207581_155207616	0.234153	UGCAUAG	AJ297793|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK146589|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	BC043086|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	NM_178111|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK149495|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr18_+_69504145_69504185	0.232925	UGCAUAG	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr1_-_59030272_59030346	0.211704	UGCAUAG	AK036650|Trak2|70827|trafficking protein, kinesin binding 2	AK048261|Trak2|70827|trafficking protein, kinesin binding 2	AK014647|Trak2|70827|trafficking protein, kinesin binding 2	NM_172406|Trak2|70827|trafficking protein, kinesin binding 2
mm9_v1_chr12_-_47919695_47919761	0.209901	UGCAUAG	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr8_+_88364729_88364932	0.208745	UGCAUAG	AK089493|Phkb|102093|phosphorylase kinase beta	BC053105|Phkb|102093|phosphorylase kinase beta	NM_199446|Phkb|102093|phosphorylase kinase beta	AK165815|Phkb|102093|phosphorylase kinase beta
mm9_v1_chr11_-_59041767_59041787	0.197071	UGCAUAG	NM_007476|Arf1|11840|ADP-ribosylation factor 1
mm9_v1_chrX_-_159267249_159267385	0.14915	UGCAUAG	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr11_-_88579517_88579542	0.110008	UGCAUAG	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr14_+_31638767_31638861	0.0909934	UGCAUAG	AK007740|Tmem110|69179|transmembrane protein 110	NM_028839|Tmem110|69179|transmembrane protein 110	AK009341|Tmem110|69179|transmembrane protein 110	AK076341|Tmem110|69179|transmembrane protein 110	AK149088|Tmem110|69179|transmembrane protein 110	AK155257|Tmem110|69179|transmembrane protein 110
mm9_v1_chr7_-_137410321_137410321	0.0690252	UGCAUAG	NM_010207|Fgfr2|14183|fibroblast growth factor receptor 2	NM_201601|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr13_+_51266390_51266427	0.0690087	UGCAUAG	BC038905|Nxnl2|75124|nucleoredoxin-like 2	AK015847|Nxnl2|75124|nucleoredoxin-like 2	NM_029173|Nxnl2|75124|nucleoredoxin-like 2	BC016199|Nxnl2|75124|nucleoredoxin-like 2
mm9_v1_chr9_+_96159666_96159703	0.0607435	UGCAUAG	NM_001184710|Tfdp2|211586|transcription factor Dp 2	NM_001184711|Tfdp2|211586|transcription factor Dp 2	AK158829|Tfdp2|211586|transcription factor Dp 2	BC092230|Tfdp2|211586|transcription factor Dp 2
