mm9_v1_chr10_+_97028409_97028443	11.8833	VSX1,2.p2	AK075737|Lum|17022|lumican	AK085240|Lum|17022|lumican	AK164774|Lum|17022|lumican
mm9_v1_chr2_+_20211539_20211581	6.00352	VSX1,2.p2	NM_001081006|Etl4|208618|enhancer trap locus 4
mm9_v1_chr4_+_133624366_133624437	4.6802	VSX1,2.p2	AK145690|Aim1l|230806|absent in melanoma 1-like	NM_001162970|Aim1l|230806|absent in melanoma 1-like	BC150738|Aim1l|230806|absent in melanoma 1-like
mm9_v1_chr3_-_27316628_27316630	3.76736	VSX1,2.p2	AK039335|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr9_-_104028940_104028972	3.2859	VSX1,2.p2	BC110556|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	BC140999|Ccrl1|252837|chemokine (C-C motif) receptor-like 1	NM_145700|Ccrl1|252837|chemokine (C-C motif) receptor-like 1
mm9_v1_chr4_-_14548903_14548926	2.92174	VSX1,2.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr1_-_72920776_72921027	2.39608	VSX1,2.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr2_-_168592528_168592700	2.34025	VSX1,2.p2	AY463371|Sall4|99377|sal-like 4 (Drosophila)	AY463372|Sall4|99377|sal-like 4 (Drosophila)	AY463373|Sall4|99377|sal-like 4 (Drosophila)	AK049188|Sall4|99377|sal-like 4 (Drosophila)	AK145388|Sall4|99377|sal-like 4 (Drosophila)	BC099928|Sall4|99377|sal-like 4 (Drosophila)	BC053716|Sall4|99377|sal-like 4 (Drosophila)	NM_175303|Sall4|99377|sal-like 4 (Drosophila)	NM_201395|Sall4|99377|sal-like 4 (Drosophila)	NM_201396|Sall4|99377|sal-like 4 (Drosophila)
mm9_v1_chr19_+_38207270_38207270	2.25922	VSX1,2.p2	BC027050|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_001170959|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_033614|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime
mm9_v1_chr10_-_26095736_26095813	2.25075	VSX1,2.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr7_+_31536489_31536560	2.16937	VSX1,2.p2	BC051531|Sbsn|282619|suprabasin	NM_001083903|Sbsn|282619|suprabasin	NM_172205|Sbsn|282619|suprabasin	AY115494|Sbsn|282619|suprabasin	AY444556|Sbsn|282619|suprabasin	BC139385|Sbsn|282619|suprabasin	AK081760|Sbsn|282619|suprabasin	BC092350|Sbsn|282619|suprabasin
mm9_v1_chr8_+_11448095_11448135	2.16751	VSX1,2.p2	AK075619|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr8_-_11199802_11199859	2.09704	VSX1,2.p2	X92439|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr8_+_46744023_46744252	1.86007	VSX1,2.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr5_+_140019846_140019918	1.75249	VSX1,2.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chr4_+_145260599_145260599	1.58788	VSX1,2.p2	BC096593|Gm13242|100041379|predicted gene 13242	NM_001103158|Gm13242|100041379|predicted gene 13242
mm9_v1_chr2_-_25325248_25325271	1.53317	VSX1,2.p2	AB006361|Ptgds|19215|prostaglandin D2 synthase (brain)	BC043015|Ptgds|19215|prostaglandin D2 synthase (brain)	AK131859|Ptgds|19215|prostaglandin D2 synthase (brain)	NM_008963|Ptgds|19215|prostaglandin D2 synthase (brain)
mm9_v1_chr11_+_60351159_60351225	1.52991	VSX1,2.p2	NM_172943|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr6_+_77193078_77193105	1.51177	VSX1,2.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chrX_+_16196823_16196987	1.49358	VSX1,2.p2	AK146612|Maoa|17161|monoamine oxidase A	NM_173740|Maoa|17161|monoamine oxidase A	BC029100|Maoa|17161|monoamine oxidase A	AK004337|Maoa|17161|monoamine oxidase A	AK155052|Maoa|17161|monoamine oxidase A	AK164457|Maoa|17161|monoamine oxidase A
mm9_v1_chr5_-_113510602_113510603	1.23662	VSX1,2.p2	NM_001159650|Crybb3|12962|crystallin, beta B3	NM_021352|Crybb3|12962|crystallin, beta B3
mm9_v1_chr9_+_43118845_43118930	1.09053	VSX1,2.p2	NM_023655|Trim29|72169|tripartite motif-containing 29	BC027353|Trim29|72169|tripartite motif-containing 29
mm9_v1_chr4_+_145850602_145850602	1.00682	VSX1,2.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr4_+_146395958_146395958	1.00682	VSX1,2.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr7_-_141568510_141568510	0.973742	VSX1,2.p2	AK145411|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed	NM_001081331|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed
mm9_v1_chr4_+_146124224_146124224	0.961451	VSX1,2.p2	NM_001177546|Zfp600|667666|zinc finger protein 600
mm9_v1_chr10_+_39332934_39333058	0.920748	VSX1,2.p2	AK037407|Traf3ip2|103213|TRAF3 interacting protein 2	BC138234|Traf3ip2|103213|TRAF3 interacting protein 2	BC138235|Traf3ip2|103213|TRAF3 interacting protein 2	AK031556|Traf3ip2|103213|TRAF3 interacting protein 2	AK098107|Traf3ip2|103213|TRAF3 interacting protein 2	BC096483|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr5_-_86802390_86802444	0.92021	VSX1,2.p2	AF448809|Tmprss11d|231382|transmembrane protease, serine 11d	BC020151|Tmprss11d|231382|transmembrane protease, serine 11d	NM_145561|Tmprss11d|231382|transmembrane protease, serine 11d	AB053953|Tmprss11d|231382|transmembrane protease, serine 11d
mm9_v1_chr6_-_136730254_136730285	0.888648	VSX1,2.p2	BC099968|Gucy2c|14917|guanylate cyclase 2c	NM_001127318|Gucy2c|14917|guanylate cyclase 2c	NM_145067|Gucy2c|14917|guanylate cyclase 2c	AK136496|Gucy2c|14917|guanylate cyclase 2c
mm9_v1_chr16_+_45094196_45094202	0.846896	VSX1,2.p2	AK032359|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr18_+_57628139_57628180	0.839357	VSX1,2.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr3_+_159502646_159502709	0.825773	VSX1,2.p2	BC075615|Wls|68151|wntless homolog (Drosophila)	NM_026582|Wls|68151|wntless homolog (Drosophila)	AK029053|Wls|68151|wntless homolog (Drosophila)	AK044810|Wls|68151|wntless homolog (Drosophila)	AK019886|Wls|68151|wntless homolog (Drosophila)	AK029104|Wls|68151|wntless homolog (Drosophila)	AK029315|Wls|68151|wntless homolog (Drosophila)	AK031444|Wls|68151|wntless homolog (Drosophila)	AK049842|Wls|68151|wntless homolog (Drosophila)	AK128912|Wls|68151|wntless homolog (Drosophila)	AK159207|Wls|68151|wntless homolog (Drosophila)	AK159977|Wls|68151|wntless homolog (Drosophila)	AK077407|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr3_-_49561168_49561243	0.806837	VSX1,2.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr9_+_31923720_31923720	0.795858	VSX1,2.p2	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr7_-_123174560_123174560	0.777599	VSX1,2.p2	AK030713|Sox6|20679|SRY-box containing gene 6	NM_001025560|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr9_-_91255831_91255857	0.777068	VSX1,2.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr2_+_121184334_121184455	0.75331	VSX1,2.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr1_+_24184448_24184693	0.742166	VSX1,2.p2	NM_007740|Col9a1|12839|collagen, type IX, alpha 1	AK031071|Col9a1|12839|collagen, type IX, alpha 1	D17511|Col9a1|12839|collagen, type IX, alpha 1	BC046970|Col9a1|12839|collagen, type IX, alpha 1	L12215|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr10_+_97110043_97110069	0.727444	VSX1,2.p2	AK137179|Epyc|13516|epiphycan	D78274|Epyc|13516|epiphycan
mm9_v1_chr6_-_68967061_68967109	0.722824	VSX1,2.p2	
mm9_v1_chr18_-_35881144_35881144	0.690714	VSX1,2.p2	AK157485|Ecscr|68545|endothelial cell-specific chemotaxis regulator	NM_001033141|Ecscr|68545|endothelial cell-specific chemotaxis regulator
mm9_v1_chr7_+_53631843_53631909	0.681813	VSX1,2.p2	AK076157|Myod1|17927|myogenic differentiation 1	NM_010866|Myod1|17927|myogenic differentiation 1	AK142859|Myod1|17927|myogenic differentiation 1	M84918|Myod1|17927|myogenic differentiation 1	M18779|Myod1|17927|myogenic differentiation 1	BC103613|Myod1|17927|myogenic differentiation 1	BC103618|Myod1|17927|myogenic differentiation 1	BC103619|Myod1|17927|myogenic differentiation 1
mm9_v1_chr10_+_39332739_39332739	0.676022	VSX1,2.p2	AK052190|Traf3ip2|103213|TRAF3 interacting protein 2	NM_134000|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr6_-_69367406_69367460	0.672996	VSX1,2.p2	DQ372799|Igkv4-68|384515|immunoglobulin kappa variable 4-68
mm9_v1_chr10_+_73284612_73284690	0.672393	VSX1,2.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr6_-_69494873_69494938	0.655745	VSX1,2.p2	J04610|Igkv4-57-1|384514|immunoglobulin kappa variable 4-57-1
mm9_v1_chr5_+_90919768_90919776	0.634215	VSX1,2.p2	BC066206|Afp|11576|alpha fetoprotein
mm9_v1_chr5_+_90919758_90919765	0.633961	VSX1,2.p2	AK075972|Afp|11576|alpha fetoprotein	AK076197|Afp|11576|alpha fetoprotein	AK146513|Afp|11576|alpha fetoprotein	AK146524|Afp|11576|alpha fetoprotein	AK168426|Afp|11576|alpha fetoprotein	AK168574|Afp|11576|alpha fetoprotein	AK168751|Afp|11576|alpha fetoprotein	AK169046|Afp|11576|alpha fetoprotein	AK169054|Afp|11576|alpha fetoprotein	AK010934|Afp|11576|alpha fetoprotein	AK076053|Afp|11576|alpha fetoprotein	AK145975|Afp|11576|alpha fetoprotein	AK168576|Afp|11576|alpha fetoprotein	AK168883|Afp|11576|alpha fetoprotein	AK169147|Afp|11576|alpha fetoprotein	AK167549|Afp|11576|alpha fetoprotein	V00743|Afp|11576|alpha fetoprotein
mm9_v1_chr12_-_105711324_105711536	0.625891	VSX1,2.p2	AB221548|Gsc|14836|goosecoid homeobox	Y13150|Gsc|14836|goosecoid homeobox	NM_010351|Gsc|14836|goosecoid homeobox	Y13149|Gsc|14836|goosecoid homeobox	X99239|Gsc|14836|goosecoid homeobox
mm9_v1_chr4_-_147016606_147016616	0.615935	VSX1,2.p2	BC058858|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene	NM_145078|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene
mm9_v1_chr2_+_103909961_103910022	0.567029	VSX1,2.p2	BC038128|Cd59b|333883|CD59b antigen	BC059731|Cd59b|333883|CD59b antigen
mm9_v1_chr1_-_72921098_72921102	0.551655	VSX1,2.p2	L12447|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr1_+_174486066_174486068	0.546999	VSX1,2.p2	AK037228|Vsig8|240916|V-set and immunoglobulin domain containing 8	NM_177723|Vsig8|240916|V-set and immunoglobulin domain containing 8
mm9_v1_chr1_+_40381420_40381534	0.537375	VSX1,2.p2	AK054530|Il1rl2|107527|interleukin 1 receptor-like 2	NM_133193|Il1rl2|107527|interleukin 1 receptor-like 2	AF284433|Il1rl2|107527|interleukin 1 receptor-like 2	BC117797|Il1rl2|107527|interleukin 1 receptor-like 2	AK085780|Il1rl2|107527|interleukin 1 receptor-like 2
mm9_v1_chr6_-_130287518_130287643	0.537171	VSX1,2.p2	U56404|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U56405|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC101952|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103543|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103544|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103545|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132524|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132526|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145192|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145193|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U10305|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	AK159595|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U49868|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	NM_010648|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U09739|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3
mm9_v1_chr17_+_17539832_17539856	0.533218	VSX1,2.p2	AK017685|Lix1|66643|limb expression 1 homolog (chicken)	AK012220|Lix1|66643|limb expression 1 homolog (chicken)	BC052700|Lix1|66643|limb expression 1 homolog (chicken)	BC063057|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr12_-_11215753_11215777	0.528256	VSX1,2.p2	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr19_+_56798916_56798947	0.478451	VSX1,2.p2	AK039569|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr5_-_84846348_84846408	0.465061	VSX1,2.p2	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr12_+_110783786_110783839	0.462345	VSX1,2.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr2_+_151736942_151737067	0.402794	VSX1,2.p2	AK132988|Angpt4|11602|angiopoietin 4	AK154379|Angpt4|11602|angiopoietin 4	AF113707|Angpt4|11602|angiopoietin 4	BC129965|Angpt4|11602|angiopoietin 4	BC129966|Angpt4|11602|angiopoietin 4	NM_009641|Angpt4|11602|angiopoietin 4
mm9_v1_chr6_-_116666759_116666930	0.388877	VSX1,2.p2	BC116440|Tmem72|319776|transmembrane protein 72	BC116441|Tmem72|319776|transmembrane protein 72	AK085603|Tmem72|319776|transmembrane protein 72	NM_178768|Tmem72|319776|transmembrane protein 72	AK049938|Tmem72|319776|transmembrane protein 72	AK033856|Tmem72|319776|transmembrane protein 72	BC093486|Tmem72|319776|transmembrane protein 72	AK049048|Tmem72|319776|transmembrane protein 72	AK141578|Tmem72|319776|transmembrane protein 72
mm9_v1_chr2_+_3341402_3341476	0.34378	VSX1,2.p2	NM_001110214|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_146114|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_175683|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AF387731|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK037126|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK088810|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052369|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	BC108935|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK166324|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052490|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK038788|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm9_v1_chr13_-_33250219_33250219	0.341369	VSX1,2.p2	BC051664|Serpinb9c|20707|serine (or cysteine) peptidase inhibitor, clade B, member 9c	NM_011453|Serpinb9c|20707|serine (or cysteine) peptidase inhibitor, clade B, member 9c
mm9_v1_chr5_+_90919739_90919752	0.333561	VSX1,2.p2	NM_007423|Afp|11576|alpha fetoprotein
mm9_v1_chr6_+_77192839_77192971	0.328771	VSX1,2.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr4_-_147183894_147183948	0.313531	VSX1,2.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr11_-_65083322_65083378	0.306728	VSX1,2.p2	BC141281|Myocd|214384|myocardin	BC145607|Myocd|214384|myocardin
mm9_v1_chr15_-_8660729_8660806	0.281015	VSX1,2.p2	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr6_+_57063418_57063418	0.280587	VSX1,2.p2	NM_053231|Vmn1r10|113858|vomeronasal 1 receptor 10
mm9_v1_chr11_-_99184254_99184266	0.277658	VSX1,2.p2	BC018391|Krt25|70810|keratin 25	NM_133730|Krt25|70810|keratin 25	AK014538|Krt25|70810|keratin 25
mm9_v1_chr4_+_146927385_146927415	0.268123	VSX1,2.p2	NM_001014397|Gm13154|433804|predicted gene 13154	BC085112|Gm13154|433804|predicted gene 13154
mm9_v1_chr5_-_91069499_91069680	0.258977	VSX1,2.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr6_-_130143018_130143129	0.246159	VSX1,2.p2	BC116376|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC131790|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF237686|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	NM_010651|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49865|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49866|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49867|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9
mm9_v1_chr1_-_132586370_132586494	0.237956	VSX1,2.p2	BC065379|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr2_-_164410946_164410946	0.233653	VSX1,2.p2	NM_001033240|Wfdc6a|209351|WAP four-disulfide core domain 6A
mm9_v1_chr11_-_48864726_48864743	0.230644	VSX1,2.p2	BC066104|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2	AK037088|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2	NM_173434|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2
mm9_v1_chr3_-_130433225_130433274	0.229696	VSX1,2.p2	BC058118|Rpl34|68436|ribosomal protein L34	NM_026724|Rpl34|68436|ribosomal protein L34	BC100360|Rpl34-ps1|619547|ribosomal protein L34, pseudogene 1	AK003177|Rpl34|68436|ribosomal protein L34	AK146252|Rpl34|68436|ribosomal protein L34	BC086936|Rpl34|68436|ribosomal protein L34
mm9_v1_chr4_-_132066370_132066424	0.217063	VSX1,2.p2	BC005672|Sesn2|230784|sestrin 2	NM_144907|Sesn2|230784|sestrin 2	AK170228|Sesn2|230784|sestrin 2	AK170547|Sesn2|230784|sestrin 2	AK143788|Sesn2|230784|sestrin 2
mm9_v1_chr10_+_98453513_98453709	0.210929	VSX1,2.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr12_+_56699903_56699903	0.200833	VSX1,2.p2	NM_020287|Insm2|56856|insulinoma-associated 2
mm9_v1_chr17_+_17539908_17539941	0.191052	VSX1,2.p2	AF351204|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr11_-_94693315_94693315	0.186309	VSX1,2.p2	NM_001163172|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr17_+_35670145_35670217	0.182519	VSX1,2.p2	AK137759|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	NM_020576|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	AF484421|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	AF159091|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	BC110561|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)
mm9_v1_chr5_-_84846256_84846332	0.174839	VSX1,2.p2	AK089143|Epha5|13839|Eph receptor A5
mm9_v1_chr10_+_98725871_98725972	0.170679	VSX1,2.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr15_+_101303908_101304071	0.159747	VSX1,2.p2	AK161149|Krt86|16679|keratin 86	NM_010667|Krt86|16679|keratin 86	BC139222|Krt86|16679|keratin 86	X99143|Krt86|16679|keratin 86
mm9_v1_chr3_+_92748407_92748407	0.153794	VSX1,2.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr16_-_92400226_92400324	0.137519	VSX1,2.p2	AF237790|Rcan1|54720|regulator of calcineurin 1	AF263239|Rcan1|54720|regulator of calcineurin 1	BC013551|Rcan1|54720|regulator of calcineurin 1	AK077283|Rcan1|54720|regulator of calcineurin 1	NM_019466|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr10_+_127335573_127335617	0.118301	VSX1,2.p2	AK037184|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	BC064820|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	NM_027301|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	AY044433|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7
mm9_v1_chr15_-_101573522_101573539	0.117904	VSX1,2.p2	BC125346|Krt71|56735|keratin 71	BC125348|Krt71|56735|keratin 71	AB033744|Krt71|56735|keratin 71	AB100413|Krt71|56735|keratin 71	AY033497|Krt71|56735|keratin 71	NM_019956|Krt71|56735|keratin 71	AK003610|Krt71|56735|keratin 71	AK003704|Krt71|56735|keratin 71
mm9_v1_chr4_+_129138924_129138934	0.110278	VSX1,2.p2	AK037201|Bsdc1|100383|BSD domain containing 1	AK084857|Bsdc1|100383|BSD domain containing 1	AK144053|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr6_+_57087346_57087346	0.107238	VSX1,2.p2	BC104398|Vmn1r11|113860|vomeronasal 1 receptor 11	BC104399|Vmn1r11|113860|vomeronasal 1 receptor 11	NM_053233|Vmn1r11|113860|vomeronasal 1 receptor 11
mm9_v1_chr19_-_55315725_55315725	0.104418	VSX1,2.p2	AY395631|Gucy2g|73707|guanylate cyclase 2g	NM_001081076|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr15_-_101632762_101632762	0.0962572	VSX1,2.p2	BC067067|Krt73|223915|keratin 73	NM_212485|Krt73|223915|keratin 73
mm9_v1_chr15_+_4677207_4677220	0.092608	VSX1,2.p2	NM_016704|C6|12274|complement component 6	AF184900|C6|12274|complement component 6	AK041057|C6|12274|complement component 6	BC011251|C6|12274|complement component 6
mm9_v1_chr11_-_69648350_69648356	0.0879572	VSX1,2.p2	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr13_-_16115192_16115259	0.0855757	VSX1,2.p2	AK045681|B230303A05Rik|328191|RIKEN cDNA B230303A05 gene
mm9_v1_chr10_-_106922986_106923189	0.0638252	VSX1,2.p2	X56182|Myf5|17877|myogenic factor 5	BC132144|Myf5|17877|myogenic factor 5	AK044894|Myf5|17877|myogenic factor 5	AK083402|Myf5|17877|myogenic factor 5	NM_008656|Myf5|17877|myogenic factor 5
mm9_v1_chr17_+_26792031_26792503	0.0579927	VSX1,2.p2	AK010290|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr3_+_93272675_93272675	0.0530025	VSX1,2.p2	AK017244|Tchhl1|71325|trichohyalin-like 1	NM_027762|Tchhl1|71325|trichohyalin-like 1
mm9_v1_chr6_+_57020888_57020888	0.0323382	VSX1,2.p2	BC132241|Vmn1r9|171203|vomeronasal 1 receptor 9	BC132577|Vmn1r9|171203|vomeronasal 1 receptor 9	NM_134185|Vmn1r9|171203|vomeronasal 1 receptor 9
mm9_v1_chr3_-_115956312_115956401	0.0186692	VSX1,2.p2	BC029939|Gpr88|64378|G-protein coupled receptor 88	AB042408|Gpr88|64378|G-protein coupled receptor 88	NM_022427|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chrM_+_13543_13577	0.0118416	VSX1,2.p2	
mm9_v1_chr4_+_110070336_110070438	0.00840296	VSX1,2.p2	AK016502|Agbl4|78933|ATP/GTP binding protein-like 4	AK019817|Agbl4|78933|ATP/GTP binding protein-like 4	AK051109|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867039|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867040|Agbl4|78933|ATP/GTP binding protein-like 4	NM_001048189|Agbl4|78933|ATP/GTP binding protein-like 4	NM_030231|Agbl4|78933|ATP/GTP binding protein-like 4
mm9_v1_chr1_+_179659944_179659944	0.00509419	VSX1,2.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
