hg19_v1_chr3_+_39509069_39509170	26.9151	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg19_v1_chr3_+_181417387_181417398	14.8377	SOX2.p2	BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)
hg19_v1_chr2_-_2334887_2335044	9.64586	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr16_-_11375094_11375191	9.54533	SOX2.p2	BT006746|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1
hg19_v1_chr5_-_114515733_114516242	7.50579	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg19_v1_chr5_+_140201221_140201360	7.32277	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg19_v1_chr2_+_149633173_149633186	6.55582	SOX2.p2	
hg19_v1_chr5_-_160279045_160279218	6.44657	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg19_v1_chr19_+_18062110_18062110	6.39012	SOX2.p2	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
hg19_v1_chr8_+_104831415_104831735	6.2299	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chrX_+_84499037_84499135	6.17025	SOX2.p2	BC006349|ZNF711|7552|zinc finger protein 711	AK308097|ZNF711|7552|zinc finger protein 711
hg19_v1_chr7_+_20370724_20370745	6.09853	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg19_v1_chr18_-_3874688_3874766	6.07868	SOX2.p2	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr5_+_140474198_140474414	5.81981	SOX2.p2	AK027526|PCDHB2|56133|protocadherin beta 2	BC098575|PCDHB2|56133|protocadherin beta 2	NM_018936|PCDHB2|56133|protocadherin beta 2	AK314642|PCDHB2|56133|protocadherin beta 2	BC098347|PCDHB2|56133|protocadherin beta 2	AF152495|PCDHB2|56133|protocadherin beta 2	AF217756|PCDHB2|56133|protocadherin beta 2	AB209745|PCDHB2|56133|protocadherin beta 2
hg19_v1_chrX_+_100333835_100333871	5.77864	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg19_v1_chr5_-_87969135_87969156	5.57437	SOX2.p2	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461	AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461	AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461	BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461
hg19_v1_chr1_+_166958497_166958588	5.5329	SOX2.p2	AK302253|MAEL|84944|maelstrom homolog (Drosophila)	AK131066|MAEL|84944|maelstrom homolog (Drosophila)	DQ076156|MAEL|84944|maelstrom homolog (Drosophila)	GU383113|MAEL|84944|maelstrom homolog (Drosophila)	AK027810|MAEL|84944|maelstrom homolog (Drosophila)	NM_032858|MAEL|84944|maelstrom homolog (Drosophila)	BC028595|MAEL|84944|maelstrom homolog (Drosophila)
hg19_v1_chr1_-_26233367_26233367	5.4716	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chrX_+_111119278_111119427	5.33328	SOX2.p2	NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135	NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135
hg19_v1_chr2_+_27070962_27071291	5.25975	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5
hg19_v1_chrX_+_86772714_86772896	5.22684	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg19_v1_chrX_-_139866582_139866722	5.17463	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg19_v1_chr15_+_84116172_84116285	5.17111	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr5_-_110062365_110062449	5.09673	SOX2.p2	AK296542|TMEM232|642987|transmembrane protein 232	BC042563|TMEM232|642987|transmembrane protein 232	BX648527|TMEM232|642987|transmembrane protein 232	NM_001039763|TMEM232|642987|transmembrane protein 232
hg19_v1_chr8_+_103563847_103563876	5.07751	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg19_v1_chrX_-_24690740_24690978	4.91897	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr20_+_17207596_17207625	4.88758	SOX2.p2	NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr4_+_115543522_115543522	4.87027	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg19_v1_chr11_-_85397215_85397319	4.86465	SOX2.p2	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg19_v1_chr9_-_23826062_23826062	4.81727	SOX2.p2	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg19_v1_chr7_+_154002194_154002577	4.70818	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr7_+_94297448_94297456	4.69456	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr9_-_19786886_19787016	4.69022	SOX2.p2	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v1_chr5_+_140235594_140235633	4.68949	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chr13_-_53422773_53422778	4.68175	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8
hg19_v1_chr15_+_84115979_84116141	4.58367	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr4_-_87028805_87028805	4.41956	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr1_+_50571963_50571963	4.35124	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr2_+_162272619_162272744	4.32845	SOX2.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg19_v1_chr12_+_57943843_57944051	4.3081	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr5_-_146435589_146435699	4.26879	SOX2.p2	BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr9_-_73483933_73483988	4.10896	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg19_v1_chr3_+_107096187_107096434	4.0761	SOX2.p2	AK058091|CCDC54|84692|coiled-coil domain containing 54	NM_032600|CCDC54|84692|coiled-coil domain containing 54	BC030780|CCDC54|84692|coiled-coil domain containing 54	AF367469|CCDC54|84692|coiled-coil domain containing 54	DQ890829|CCDC54|84692|coiled-coil domain containing 54	DQ890830|CCDC54|84692|coiled-coil domain containing 54	DQ893985|CCDC54|84692|coiled-coil domain containing 54
hg19_v1_chr13_-_39564857_39564995	4.0167	SOX2.p2	DQ891676|STOML3|161003|stomatin (EPB72)-like 3	EU176604|STOML3|161003|stomatin (EPB72)-like 3	AK313632|STOML3|161003|stomatin (EPB72)-like 3	BC025760|STOML3|161003|stomatin (EPB72)-like 3	AK304159|STOML3|161003|stomatin (EPB72)-like 3	NM_001144033|STOML3|161003|stomatin (EPB72)-like 3	NM_145286|STOML3|161003|stomatin (EPB72)-like 3
hg19_v1_chr4_-_176733413_176733470	3.97325	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg19_v1_chr5_+_55062712_55062738	3.95525	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr1_+_87012758_87012925	3.93141	SOX2.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	HQ258531|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg19_v1_chr20_+_17206751_17206751	3.91104	SOX2.p2	BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr1_+_228337414_228337414	3.90427	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg19_v1_chr1_+_50574601_50574768	3.81052	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr15_+_51973549_51973713	3.80377	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr4_-_87281374_87281374	3.76464	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr6_-_49989647_49989693	3.72906	SOX2.p2	DQ012014|DEFB110|245913|defensin, beta 110 locus	DQ012015|DEFB110|245913|defensin, beta 110 locus	NM_001037497|DEFB110|245913|defensin, beta 110 locus	NM_001037728|DEFB110|245913|defensin, beta 110 locus
hg19_v1_chr7_-_84751246_84751246	3.71279	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg19_v1_chr7_+_20370324_20370350	3.71253	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg19_v1_chr12_+_48876285_48876285	3.69144	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg19_v1_chr11_-_84634219_84634246	3.69129	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr4_+_110749149_110749158	3.62906	SOX2.p2	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg19_v1_chr16_+_89989686_89989830	3.61096	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr18_-_3874252_3874316	3.60629	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr13_-_25745620_25745701	3.58958	SOX2.p2	AK098343|FAM123A|219287|family with sequence similarity 123A	BC032653|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chr12_+_122652265_122652265	3.55135	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg19_v1_chr10_+_99349354_99349483	3.54749	SOX2.p2	AM393165|C10orf62|414157|chromosome 10 open reading frame 62	AM393183|C10orf62|414157|chromosome 10 open reading frame 62	AM393504|C10orf62|414157|chromosome 10 open reading frame 62	AM393792|C10orf62|414157|chromosome 10 open reading frame 62	NM_001009997|C10orf62|414157|chromosome 10 open reading frame 62	BC037252|C10orf62|414157|chromosome 10 open reading frame 62
hg19_v1_chr6_+_105404922_105404922	3.5457	SOX2.p2	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg19_v1_chr2_+_115219153_115219179	3.5193	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg19_v1_chr1_+_163038934_163039274	3.49887	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr20_+_20348744_20348764	3.49502	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg19_v1_chr4_+_41258941_41259010	3.48801	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr22_-_50523853_50524033	3.47516	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr5_-_137475076_137475131	3.42709	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr4_-_20985547_20985711	3.42181	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr5_+_140207562_140207676	3.40086	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg19_v1_chr6_+_123100860_123100939	3.36115	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr13_-_25745778_25745856	3.36045	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chr5_-_11903964_11904109	3.34849	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr17_+_19990334_19990335	3.33515	SOX2.p2	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg19_v1_chr12_-_16759531_16759536	3.32438	SOX2.p2	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr19_-_6502224_6502411	3.29955	SOX2.p2	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa	EU831895|TUBB4A|10382|tubulin, beta 4A class IVa	BC006570|TUBB4A|10382|tubulin, beta 4A class IVa	AK095202|TUBB4A|10382|tubulin, beta 4A class IVa	AK295917|TUBB4A|10382|tubulin, beta 4A class IVa	AK075307|TUBB4A|10382|tubulin, beta 4A class IVa	BC013683|TUBB4A|10382|tubulin, beta 4A class IVa	NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa	AK293503|TUBB4A|10382|tubulin, beta 4A class IVa
hg19_v1_chr4_-_176733378_176733408	3.2986	SOX2.p2	DQ892372|GPM6A|2823|glycoprotein M6A	DQ895581|GPM6A|2823|glycoprotein M6A
hg19_v1_chr6_+_12290528_12290658	3.26988	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr12_-_48963802_48963828	3.26952	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	HQ258062|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg19_v1_chr6_+_123100645_123100753	3.24692	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr5_+_161494647_161495043	3.24652	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v1_chr3_-_58563490_58563490	3.24465	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr12_-_45307710_45307710	3.22161	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr5_-_36301999_36302010	3.2171	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg19_v1_chrX_-_128788913_128788932	3.21652	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg19_v1_chrX_-_80457440_80457440	3.1979	SOX2.p2	AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5	NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5
hg19_v1_chr17_+_54230835_54230838	3.18614	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v1_chr21_+_41239346_41239408	3.17907	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg19_v1_chr1_-_23342342_23342342	3.15237	SOX2.p2	NM_001242521|LOC729059|729059|uncharacterized LOC729059
hg19_v1_chr6_+_21666645_21666674	3.1506	SOX2.p2	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340	AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340
hg19_v1_chr9_-_77502635_77502834	3.1448	SOX2.p2	AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr5_-_83680191_83680301	3.13099	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr18_+_29171729_29171865	3.12709	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	GU727633|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg19_v1_chr1_-_205325915_205326165	3.11599	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg19_v1_chr1_+_47137496_47137606	3.11345	SOX2.p2	NM_001145474|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC067853|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC057818|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC126318|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC144026|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC144027|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	FJ211596|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)
hg19_v1_chr12_+_49212253_49212314	3.09537	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg19_v1_chr3_-_123339178_123339390	3.08368	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr5_+_140480056_140480233	3.0813	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg19_v1_chr17_-_37764165_37764181	3.03953	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg19_v1_chr1_+_156589085_156589288	3.0368	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg19_v1_chrX_+_78003205_78003212	3.02393	SOX2.p2	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4	AK314134|LPAR4|2846|lysophosphatidic acid receptor 4
hg19_v1_chr17_+_74864427_74864905	3.01339	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg19_v1_chr12_-_87232635_87232680	2.99736	SOX2.p2	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v1_chr9_+_103235634_103235825	2.98703	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr1_+_1361507_1361525	2.96838	SOX2.p2	NM_001146685|TMEM88B|643965|transmembrane protein 88B
hg19_v1_chr20_-_44175995_44176064	2.96697	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg19_v1_chr3_-_149510609_149510609	2.95082	SOX2.p2	BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1	NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1
hg19_v1_chr7_-_112727799_112727815	2.94493	SOX2.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chrX_+_51927918_51928036	2.94217	SOX2.p2	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr1_+_163038564_163038763	2.94027	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr4_-_139163222_139163506	2.9396	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr5_-_96478502_96478575	2.93794	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr16_+_27078218_27078277	2.9191	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg19_v1_chr5_+_140186658_140186772	2.91822	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4	HQ258500|PCDHA4|56144|protocadherin alpha 4
hg19_v1_chr2_-_198540583_198540767	2.91415	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg19_v1_chr4_+_175839508_175839558	2.91185	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg19_v1_chr3_-_123339423_123339529	2.89428	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr7_+_128349111_128349143	2.89242	SOX2.p2	AK093161|FAM71F1|84691|family with sequence similarity 71, member F1	AK302221|FAM71F1|84691|family with sequence similarity 71, member F1	BC040906|FAM71F1|84691|family with sequence similarity 71, member F1	AK310426|FAM71F1|84691|family with sequence similarity 71, member F1
hg19_v1_chr1_-_32801606_32801856	2.88655	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chr2_-_217724781_217724781	2.874	SOX2.p2	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)	NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)
hg19_v1_chr9_-_95298251_95298373	2.87259	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr12_+_18891040_18891201	2.87242	SOX2.p2	BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3
hg19_v1_chr20_+_32250089_32250141	2.87092	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg19_v1_chr1_+_240255171_240255184	2.85982	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg19_v1_chr8_+_80523351_80523367	2.85452	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2
hg19_v1_chr5_+_140213968_140213968	2.84881	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg19_v1_chr1_+_209757044_209757077	2.84865	SOX2.p2	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG
hg19_v1_chr2_+_162272800_162272843	2.83558	SOX2.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg19_v1_chr8_+_80523376_80523431	2.83254	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg19_v1_chr12_+_85430098_85430148	2.82931	SOX2.p2	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1
hg19_v1_chr18_-_31802433_31802433	2.82596	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg19_v1_chr1_+_203096835_203096860	2.81666	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg19_v1_chr1_-_116383323_116383361	2.81195	SOX2.p2	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr20_+_17207680_17207950	2.80566	SOX2.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chrX_-_138287180_138287215	2.79844	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr2_+_14772839_14772864	2.79153	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr9_-_127269689_127269719	2.79005	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg19_v1_chrX_-_152160604_152160760	2.77656	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg19_v1_chr1_-_177133950_177134023	2.7706	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg19_v1_chr7_+_73245192_73245350	2.76645	SOX2.p2	NM_001305|CLDN4|1364|claudin 4	AK026651|CLDN4|1364|claudin 4	AK124076|CLDN4|1364|claudin 4	BC000671|CLDN4|1364|claudin 4	AB000712|CLDN4|1364|claudin 4
hg19_v1_chr15_-_82338348_82338385	2.76051	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr6_+_121756744_121756906	2.74299	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chr16_+_89988416_89988416	2.72516	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3 class III	NM_001197181|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr3_-_116164363_116164384	2.719	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chrX_-_138724851_138724999	2.69054	SOX2.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg19_v1_chr5_-_83680590_83680738	2.66598	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr8_-_87755880_87755944	2.65897	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg19_v1_chr18_+_31158540_31158578	2.65661	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg19_v1_chr2_-_241759627_241759724	2.64965	SOX2.p2	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A	NM_001244008|KIF1A|547|kinesin family member 1A	NM_004321|KIF1A|547|kinesin family member 1A
hg19_v1_chr20_-_3762060_3762112	2.64768	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg19_v1_chr1_-_173638970_173639002	2.6301	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg19_v1_chr3_+_19189969_19190040	2.60228	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg19_v1_chrX_+_84498993_84499002	2.59837	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg19_v1_chr19_+_12949258_12949385	2.59803	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg19_v1_chr10_-_128209996_128210009	2.58459	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg19_v1_chr7_-_96633608_96633614	2.58426	SOX2.p2	AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)
hg19_v1_chrX_-_51812249_51812367	2.57581	SOX2.p2	BC063838|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr8_+_80523048_80523048	2.57313	SOX2.p2	NM_001199214|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2
hg19_v1_chr2_+_166428845_166428854	2.57301	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr12_+_64238511_64238582	2.56868	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg19_v1_chr15_-_83876769_83876824	2.54893	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr4_-_5889992_5890000	2.54666	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr7_-_137028533_137028577	2.53652	SOX2.p2	BC005916|PTN|5764|pleiotrophin	NM_002825|PTN|5764|pleiotrophin	M57399|PTN|5764|pleiotrophin
hg19_v1_chr1_+_218518675_218518747	2.53253	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg19_v1_chr1_-_177133818_177133833	2.52905	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg19_v1_chr2_-_26205327_26205367	2.52185	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr4_-_101439071_101439249	2.51738	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg19_v1_chr22_-_50523737_50523742	2.51433	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr17_-_39661803_39661865	2.50851	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	HQ258420|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg19_v1_chr9_+_103235489_103235519	2.48805	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr11_-_83393436_83393467	2.48636	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr18_+_66465316_66465369	2.48382	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr19_+_35782988_35783096	2.47908	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr14_+_29241989_29242002	2.47901	SOX2.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg19_v1_chr3_+_173116243_173116243	2.47597	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr3_+_181429711_181429715	2.46566	SOX2.p2	NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2
hg19_v1_chrX_+_107288199_107288320	2.45394	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chrX_-_13835187_13835203	2.45331	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr14_-_60097223_60097308	2.44153	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chr8_-_30706532_30706607	2.43458	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg19_v1_chr12_-_16759430_16759432	2.4307	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr7_-_137028433_137028449	2.42311	SOX2.p2	X52946|PTN|5764|pleiotrophin	AK313424|PTN|5764|pleiotrophin
hg19_v1_chr3_-_192635627_192635646	2.41147	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr18_+_72201669_72201702	2.40287	SOX2.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chrX_-_142605218_142605306	2.39614	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg19_v1_chr5_+_140254930_140255057	2.38274	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12	HQ258507|PCDHA12|56137|protocadherin alpha 12
hg19_v1_chr12_-_75603510_75603510	2.37856	SOX2.p2	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr2_+_210444364_210444424	2.37631	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr12_-_67072752_67072761	2.36886	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr17_-_29624249_29624379	2.36394	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg19_v1_chr2_-_1926501_1926602	2.36361	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr15_+_23810453_23810453	2.3612	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr5_+_140739589_140739702	2.36017	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr1_+_87797301_87797350	2.34802	SOX2.p2	
hg19_v1_chr4_+_158141735_158142034	2.34728	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr19_+_3880617_3880653	2.34614	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr20_+_36149606_36149733	2.32861	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr19_+_3880675_3880686	2.32409	SOX2.p2	BC026217|ATCAY|85300|ataxia, cerebellar, Cayman type	AK027889|ATCAY|85300|ataxia, cerebellar, Cayman type	AK092309|ATCAY|85300|ataxia, cerebellar, Cayman type	AK299522|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr2_-_26205437_26205444	2.32408	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr3_+_132757170_132757204	2.31733	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg19_v1_chr5_-_114631964_114631986	2.30953	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg19_v1_chrX_-_13835213_13835231	2.30866	SOX2.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg19_v1_chr8_-_21988518_21988662	2.29611	SOX2.p2	NM_005144|HR|55806|hairless homolog (mouse)	NM_018411|HR|55806|hairless homolog (mouse)
hg19_v1_chr7_-_137028370_137028376	2.2922	SOX2.p2	AK290488|PTN|5764|pleiotrophin
hg19_v1_chr5_+_121465214_121465277	2.29092	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg19_v1_chr7_-_137028275_137028331	2.27311	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg19_v1_chr10_+_134000335_134000544	2.2714	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg19_v1_chr12_+_52056547_52056601	2.26239	SOX2.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v1_chr5_+_139175385_139175428	2.26035	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg19_v1_chrX_-_13835012_13835171	2.25911	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr4_+_95679075_95679138	2.25061	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg19_v1_chr17_+_77751929_77752033	2.2493	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg19_v1_chr2_-_31030271_31030316	2.24831	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg19_v1_chr8_+_80523304_80523313	2.24718	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg19_v1_chr12_-_18890917_18890990	2.24428	SOX2.p2	AF532185|PLCZ1|89869|phospholipase C, zeta 1	NM_033123|PLCZ1|89869|phospholipase C, zeta 1	AK314516|PLCZ1|89869|phospholipase C, zeta 1	AY035866|PLCZ1|89869|phospholipase C, zeta 1	AK292279|PLCZ1|89869|phospholipase C, zeta 1
hg19_v1_chr1_-_213020947_213020990	2.23601	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg19_v1_chr4_+_154178525_154178554	2.23574	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr7_-_112727832_112727848	2.23508	SOX2.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr1_+_159141376_159141555	2.23382	SOX2.p2	AK289541|CADM3|57863|cell adhesion molecule 3	NM_021189|CADM3|57863|cell adhesion molecule 3	AK308915|CADM3|57863|cell adhesion molecule 3	NM_001127173|CADM3|57863|cell adhesion molecule 3	AF363367|CADM3|57863|cell adhesion molecule 3	AY358332|CADM3|57863|cell adhesion molecule 3	AF062733|CADM3|57863|cell adhesion molecule 3	BC033819|CADM3|57863|cell adhesion molecule 3	AY046418|CADM3|57863|cell adhesion molecule 3	AF529206|CADM3|57863|cell adhesion molecule 3	DQ890848|CADM3|57863|cell adhesion molecule 3	DQ894002|CADM3|57863|cell adhesion molecule 3
hg19_v1_chr15_-_82338459_82338494	2.22995	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr7_-_142583260_142583506	2.22861	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg19_v1_chr12_-_71148063_71148236	2.22263	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr1_+_50574589_50574594	2.22179	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chrX_-_151619669_151619830	2.2047	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg19_v1_chr17_+_7323642_7323702	2.20463	SOX2.p2	AK097400|SPEM1|374768|spermatid maturation 1	BC033882|SPEM1|374768|spermatid maturation 1	NM_199339|SPEM1|374768|spermatid maturation 1
hg19_v1_chrX_-_13835313_13835318	2.19997	SOX2.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr13_+_96085852_96085857	2.19975	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr18_-_24445652_24445781	2.18497	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4	HQ901095|AQP4|361|aquaporin 4
hg19_v1_chrX_+_145891301_145891301	2.17693	SOX2.p2	NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A	NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B
hg19_v1_chr3_+_132757216_132757252	2.17541	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg19_v1_chr12_-_71148383_71148538	2.1699	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr15_-_41166336_41166558	2.16673	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg19_v1_chr4_+_41258909_41258928	2.16387	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_-_96478438_96478446	2.16385	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr15_+_43885251_43885293	2.16001	SOX2.p2	NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B	AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A
hg19_v1_chrX_+_102965836_102965836	2.15601	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg19_v1_chr9_+_101705710_101706256	2.15565	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg19_v1_chr7_+_105603656_105603741	2.15272	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg19_v1_chr14_+_62584120_62584196	2.14971	SOX2.p2	BX248751|FLJ43390|646113|uncharacterized LOC646113
hg19_v1_chr3_-_192635933_192635949	2.14764	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr5_-_146460991_146461053	2.14411	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr19_+_3880660_3880671	2.14208	SOX2.p2	AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chrX_+_30233674_30233692	2.14096	SOX2.p2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2
hg19_v1_chr15_-_23932410_23932455	2.13924	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)
hg19_v1_chr11_-_84634437_84634464	2.13188	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr9_-_102582143_102582187	2.12814	SOX2.p2	
hg19_v1_chr2_+_155555092_155555287	2.12725	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v1_chr14_-_47812394_47812437	2.12664	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v1_chr19_+_51815095_51815101	2.12533	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg19_v1_chr20_-_13971256_13971261	2.12088	SOX2.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v1_chrX_+_140084755_140084858	2.11953	SOX2.p2	AF098307|SPANXB1|728695|SPANX family, member B1	AJ457796|SPANXF1|171490|SPANX family, member F1	NM_032461|SPANXB1|728695|SPANX family, member B1	NM_139019|SPANXF1|171490|SPANX family, member F1	NM_145664|SPANXB2|100133171|SPANX family, member B2	BC034472|SPANXB1|728695|SPANX family, member B1	BC137533|SPANXB1|728695|SPANX family, member B1	BC137536|SPANXB1|728695|SPANX family, member B1	DQ892330|SPANXB1|728695|SPANX family, member B1	DQ895534|SPANXB1|728695|SPANX family, member B1
hg19_v1_chr1_+_155853546_155853601	2.11941	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg19_v1_chr3_-_58563070_58563149	2.11935	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr7_+_87563432_87563734	2.11802	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg19_v1_chr3_-_42305438_42305438	2.10625	SOX2.p2	BC008283|CCK|885|cholecystokinin	NM_001174138|CCK|885|cholecystokinin
hg19_v1_chr11_-_125550674_125550792	2.09366	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1
hg19_v1_chr10_+_18240767_18240891	2.07618	SOX2.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg19_v1_chr4_-_176733901_176733911	2.06755	SOX2.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg19_v1_chr2_+_105471745_105472051	2.05691	SOX2.p2	NM_006236|POU3F3|5455|POU class 3 homeobox 3
hg19_v1_chr5_+_94727047_94727063	2.05574	SOX2.p2	BC034772|FAM81B|153643|family with sequence similarity 81, member B	NM_152548|FAM81B|153643|family with sequence similarity 81, member B	AK058062|FAM81B|153643|family with sequence similarity 81, member B
hg19_v1_chr2_+_14772809_14772834	2.05429	SOX2.p2	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr15_+_45248902_45248914	2.05208	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg19_v1_chr1_-_156399183_156399370	2.05121	SOX2.p2	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61	U49857|C1orf61|10485|chromosome 1 open reading frame 61	BC059943|C1orf61|10485|chromosome 1 open reading frame 61	BC107686|C1orf61|10485|chromosome 1 open reading frame 61	BC050448|C1orf61|10485|chromosome 1 open reading frame 61	AK095626|C1orf61|10485|chromosome 1 open reading frame 61	BC054045|C1orf61|10485|chromosome 1 open reading frame 61
hg19_v1_chr9_+_132934685_132934942	2.05068	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg19_v1_chr9_+_77112251_77112298	2.0399	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr6_+_123317579_123317581	2.03953	SOX2.p2	BC101377|CLVS2|134829|clavesin 2	BC101376|CLVS2|134829|clavesin 2	NM_001010852|CLVS2|134829|clavesin 2
hg19_v1_chr22_-_50523780_50523829	2.03928	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr3_-_57530067_57530070	2.03655	SOX2.p2	AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12
hg19_v1_chr14_+_85996454_85996493	2.0365	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr15_-_74726000_74726058	2.02273	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v1_chr14_-_60097314_60097374	2.02107	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr1_+_197886499_197886516	2.01891	SOX2.p2	AY273889|LHX9|56956|LIM homeobox 9	NM_020204|LHX9|56956|LIM homeobox 9
hg19_v1_chr8_+_80523339_80523339	2.01706	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg19_v1_chr19_-_7990974_7991058	2.01436	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg19_v1_chr1_+_10509775_10509775	2.00673	SOX2.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chrX_-_110655384_110655459	2.00625	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr10_-_123356158_123356158	2.00172	SOX2.p2	AK294026|FGFR2|2263|fibroblast growth factor receptor 2	NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2
hg19_v1_chr9_-_77503009_77503009	1.99214	SOX2.p2	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr12_-_16759420_16759424	1.98947	SOX2.p2	AK312418|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr2_-_105467912_105467920	1.98612	SOX2.p2	AK096498|LOC100506421|100506421|uncharacterized LOC100506421
hg19_v1_chr1_+_177140530_177140632	1.98442	SOX2.p2	AB051534|FAM5B|57795|family with sequence similarity 5, member B	AB161694|FAM5B|57795|family with sequence similarity 5, member B	BC028036|FAM5B|57795|family with sequence similarity 5, member B	NM_021165|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr11_+_113775517_113775655	1.97798	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg19_v1_chr1_+_43638000_43638092	1.97497	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_001195831|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg19_v1_chr1_-_95392501_95392780	1.97157	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg19_v1_chr6_-_32339648_32339679	1.96398	SOX2.p2	AK302176|C6orf10|10665|chromosome 6 open reading frame 10	BC034774|C6orf10|10665|chromosome 6 open reading frame 10	NM_006781|C6orf10|10665|chromosome 6 open reading frame 10	AK310230|C6orf10|10665|chromosome 6 open reading frame 10	AK225742|C6orf10|10665|chromosome 6 open reading frame 10
hg19_v1_chr2_-_86564632_86564835	1.96011	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg19_v1_chr1_+_177140062_177140095	1.9569	SOX2.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr8_+_36641841_36641900	1.95268	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg19_v1_chr6_-_29644930_29644930	1.94029	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg19_v1_chr21_+_34398210_34398292	1.93643	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg19_v1_chrX_+_110187468_110187626	1.92868	SOX2.p2	AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr1_-_50889102_50889121	1.92633	SOX2.p2	NM_032110|DMRTA2|63950|DMRT-like family A2
hg19_v1_chr1_-_31712733_31712737	1.9219	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chr4_+_41258895_41258897	1.92188	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr10_-_98119058_98119091	1.92047	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg19_v1_chr1_-_156217717_156217863	1.91531	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI
hg19_v1_chr7_+_153584383_153584418	1.91462	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr17_+_3377346_3377403	1.91226	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr9_-_91793681_91793739	1.89065	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr5_+_15500288_15500310	1.88963	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr16_+_58534045_58534152	1.88575	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr1_-_177134042_177134108	1.87444	SOX2.p2	AK309094|ASTN1|460|astrotactin 1
hg19_v1_chrX_+_107683015_107683153	1.87436	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr12_-_16759939_16760083	1.87398	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr18_+_72201799_72201902	1.87231	SOX2.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	HQ258259|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chr11_+_76092336_76092511	1.86412	SOX2.p2	AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like
hg19_v1_chr14_+_85996512_85996571	1.85849	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr11_+_112831968_112832006	1.85805	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_001242607|NCAM1|4684|neural cell adhesion molecule 1	NM_001242608|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chrX_+_64708614_64708705	1.85698	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg19_v1_chr1_-_53793743_53793820	1.85635	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr6_-_24583454_24583454	1.8554	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr12_-_45444881_45444883	1.85497	SOX2.p2	AK131230|DBX2|440097|developing brain homeobox 2	NM_001004329|DBX2|440097|developing brain homeobox 2
hg19_v1_chrX_-_24665225_24665425	1.85145	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr9_-_91793375_91793554	1.84674	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr2_+_162272892_162272921	1.84578	SOX2.p2	U49250|TBR1|10716|T-box, brain, 1	HQ258587|TBR1|10716|T-box, brain, 1
hg19_v1_chr16_+_23765947_23766091	1.84149	SOX2.p2	AF146019|CHP2|63928|calcineurin B homologous protein 2	NM_022097|CHP2|63928|calcineurin B homologous protein 2	AK313062|CHP2|63928|calcineurin B homologous protein 2
hg19_v1_chr5_+_161277702_161277816	1.83973	SOX2.p2	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr19_-_42569921_42569956	1.83664	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr10_-_104179468_104179474	1.83519	SOX2.p2	BC039259|PSD|5662|pleckstrin and Sec7 domain containing	AF452641|PSD|5662|pleckstrin and Sec7 domain containing
hg19_v1_chr12_-_113573267_113573558	1.83516	SOX2.p2	DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg19_v1_chr1_+_13911966_13911966	1.83324	SOX2.p2	NM_001006624|PDPN|10630|podoplanin	NM_001006625|PDPN|10630|podoplanin
hg19_v1_chr3_+_127347966_127348098	1.82613	SOX2.p2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2
hg19_v1_chr10_+_97759847_97759882	1.82454	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg19_v1_chr2_+_166326156_166326212	1.82217	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr21_-_32931289_32931427	1.81919	SOX2.p2	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg19_v1_chr15_-_88799961_88799971	1.81496	SOX2.p2	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3
hg19_v1_chr15_-_83876165_83876664	1.80611	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chrX_+_106449861_106449861	1.80404	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg19_v1_chr16_-_10788729_10788801	1.79303	SOX2.p2	HQ258441|TEKT5|146279|tektin 5	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg19_v1_chr2_+_153191830_153192116	1.78928	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg19_v1_chr21_+_35736322_35736371	1.78608	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg19_v1_chrX_+_37850069_37850092	1.78491	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg19_v1_chr3_+_44626453_44626459	1.78489	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg19_v1_chr7_-_100061893_100061893	1.77904	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg19_v1_chr1_-_153085963_153085988	1.77847	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg19_v1_chr12_-_75603214_75603243	1.77845	SOX2.p2	AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr1_+_215256559_215256661	1.77762	SOX2.p2	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr5_+_125967405_125967426	1.77454	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48	HQ258080|C5orf48|389320|chromosome 5 open reading frame 48
hg19_v1_chr8_+_30496116_30496116	1.76524	SOX2.p2	NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341
hg19_v1_chrX_+_18709044_18709045	1.76345	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr15_-_83240499_83240572	1.7612	SOX2.p2	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg19_v1_chr15_-_23932364_23932396	1.75876	SOX2.p2	
hg19_v1_chr16_-_75529289_75529306	1.75606	SOX2.p2	
hg19_v1_chr8_+_85095501_85095585	1.75235	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr1_-_95392449_95392498	1.7511	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg19_v1_chr6_+_13925423_13925463	1.75092	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg19_v1_chrX_-_52826387_52826387	1.7475	SOX2.p2	NM_001009616|SPANXN5|494197|SPANX family, member N5
hg19_v1_chr19_+_36132646_36132694	1.74486	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg19_v1_chr1_-_116383692_116383748	1.74289	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr20_+_2795613_2795679	1.74265	SOX2.p2	AK312218|C20orf141|128653|chromosome 20 open reading frame 141	BC014591|C20orf141|128653|chromosome 20 open reading frame 141	NM_080739|C20orf141|128653|chromosome 20 open reading frame 141	AL713708|C20orf141|128653|chromosome 20 open reading frame 141
hg19_v1_chr10_+_95517565_95517727	1.74209	SOX2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg19_v1_chr15_+_74165967_74166050	1.7416	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg19_v1_chr17_+_30814552_30814643	1.73608	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr1_-_153029987_153029987	1.72713	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg19_v1_chr17_-_42992852_42992919	1.72593	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr2_-_152955502_152955592	1.72521	SOX2.p2	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr2_-_166060552_166060603	1.72126	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr12_+_20848288_20848702	1.72036	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr11_-_102714240_102714353	1.71985	SOX2.p2	DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v1_chr12_-_24103953_24103970	1.71097	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr3_-_139258373_139258472	1.70941	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr11_+_131781303_131781375	1.69713	SOX2.p2	EF043567|NTM|50863|neurotrimin	BC050716|NTM|50863|neurotrimin
hg19_v1_chr6_+_35704858_35704858	1.69237	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg19_v1_chr15_-_37393364_37393521	1.68766	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_001220482|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg19_v1_chr8_-_108510094_108510282	1.68448	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr13_+_46276445_46276445	1.68186	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg19_v1_chr20_+_37209837_37209843	1.67584	SOX2.p2	BC029594|ADIG|149685|adipogenin	NM_001018082|ADIG|149685|adipogenin	BC119704|ADIG|149685|adipogenin	BC119705|ADIG|149685|adipogenin
hg19_v1_chr4_+_118955499_118955652	1.67078	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v1_chr4_-_113437327_113437337	1.67047	SOX2.p2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg19_v1_chr10_+_102106771_102106912	1.6685	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chr1_+_178482211_178482322	1.66741	SOX2.p2	AL136694|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49	NM_032126|C1orf49|84066|chromosome 1 open reading frame 49	AK093269|C1orf49|84066|chromosome 1 open reading frame 49	BC034972|C1orf49|84066|chromosome 1 open reading frame 49	AM392874|C1orf49|84066|chromosome 1 open reading frame 49	AM393664|C1orf49|84066|chromosome 1 open reading frame 49
hg19_v1_chr4_+_71587674_71587767	1.66439	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chrX_+_152908819_152908931	1.66031	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr20_-_44006876_44007032	1.65847	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg19_v1_chr1_-_102462371_102462604	1.65702	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg19_v1_chr22_-_50524357_50524357	1.65701	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr11_-_123524881_123525042	1.65681	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr6_+_88054570_88054570	1.65578	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg19_v1_chr11_-_57417247_57417416	1.65443	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg19_v1_chr8_+_1449531_1449568	1.64784	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg19_v1_chr12_+_106976684_106976699	1.64706	SOX2.p2	AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg19_v1_chr15_-_93632161_93632546	1.64643	SOX2.p2	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg19_v1_chrX_-_138286434_138286507	1.64349	SOX2.p2	AF108756|FGF13|2258|fibroblast growth factor 13	AK316170|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr10_-_30918625_30918646	1.64093	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg19_v1_chr19_-_11564568_11564577	1.64067	SOX2.p2	BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
hg19_v1_chr13_+_78315294_78315518	1.64049	SOX2.p2	NM_001242869|SLAIN1|122060|SLAIN motif family, member 1	NM_001242870|SLAIN1|122060|SLAIN motif family, member 1	NM_001242871|SLAIN1|122060|SLAIN motif family, member 1	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg19_v1_chr7_+_54610018_54610147	1.64014	SOX2.p2	NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A	BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A
hg19_v1_chr10_+_18549583_18549697	1.6399	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr4_-_87281177_87281215	1.63988	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr12_-_88423145_88423175	1.63232	SOX2.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg19_v1_chr20_-_21378046_21378182	1.62363	SOX2.p2	NM_033176|NKX2-4|644524|NK2 homeobox 4
hg19_v1_chr2_-_50574891_50574953	1.6227	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg19_v1_chr11_-_117747331_117747447	1.61996	SOX2.p2	AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6	AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6	AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr15_+_74610881_74610930	1.61701	SOX2.p2	AK290709|CCDC33|80125|coiled-coil domain containing 33	AK310852|CCDC33|80125|coiled-coil domain containing 33	AK026821|CCDC33|80125|coiled-coil domain containing 33	NM_182791|CCDC33|80125|coiled-coil domain containing 33	BC025689|CCDC33|80125|coiled-coil domain containing 33
hg19_v1_chr7_-_117513466_117513496	1.61645	SOX2.p2	AB051545|CTTNBP2|83992|cortactin binding protein 2	AK308081|CTTNBP2|83992|cortactin binding protein 2	AK091548|CTTNBP2|83992|cortactin binding protein 2
hg19_v1_chr2_-_208989081_208989312	1.61508	SOX2.p2	HQ258094|CRYGD|1421|crystallin, gamma D	U66583|CRYGD|1421|crystallin, gamma D	BC117338|CRYGD|1421|crystallin, gamma D	BC117340|CRYGD|1421|crystallin, gamma D	NM_006891|CRYGD|1421|crystallin, gamma D
hg19_v1_chr12_-_24103842_24103866	1.61365	SOX2.p2	AK299607|SOX5|6660|SRY (sex determining region Y)-box 5	AK096569|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chrX_-_49965657_49965663	1.61138	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg19_v1_chr7_-_122339186_122339209	1.61114	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg19_v1_chr19_-_14260728_14260872	1.60642	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg19_v1_chr2_-_152955208_152955252	1.60629	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr4_+_113970784_113970884	1.60519	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr1_+_11539177_11539294	1.5958	SOX2.p2	AB593117|PTCHD2|57540|patched domain containing 2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg19_v1_chr12_-_48119224_48119354	1.59528	SOX2.p2	AK314688|ENDOU|8909|endonuclease, polyU-specific	BC069715|ENDOU|8909|endonuclease, polyU-specific	BC069698|ENDOU|8909|endonuclease, polyU-specific	BC074763|ENDOU|8909|endonuclease, polyU-specific	AX772808|ENDOU|8909|endonuclease, polyU-specific	AK300169|ENDOU|8909|endonuclease, polyU-specific	AK075446|ENDOU|8909|endonuclease, polyU-specific	BC111782|ENDOU|8909|endonuclease, polyU-specific	M32402|ENDOU|8909|endonuclease, polyU-specific	M36109|ENDOU|8909|endonuclease, polyU-specific	NM_001172439|ENDOU|8909|endonuclease, polyU-specific	NM_001172440|ENDOU|8909|endonuclease, polyU-specific	NM_006025|ENDOU|8909|endonuclease, polyU-specific
hg19_v1_chr12_-_16759733_16759733	1.58881	SOX2.p2	BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr13_-_84456473_84456527	1.58794	SOX2.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr14_+_20295607_20295607	1.58677	SOX2.p2	NM_001004723|OR4N2|390429|olfactory receptor, family 4, subfamily N, member 2
hg19_v1_chr15_+_63335904_63336013	1.58362	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg19_v1_chr5_+_140625146_140625146	1.58302	SOX2.p2	AF152494|PCDHB15|56121|protocadherin beta 15	AF217742|PCDHB15|56121|protocadherin beta 15	DQ893315|PCDHB15|56121|protocadherin beta 15	DQ896630|PCDHB15|56121|protocadherin beta 15	NM_018935|PCDHB15|56121|protocadherin beta 15
hg19_v1_chr20_-_29993955_29994068	1.57461	SOX2.p2	HQ258031|DEFB121|245934|defensin, beta 121	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg19_v1_chr3_-_116164321_116164341	1.57305	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr8_+_24151579_24151636	1.57203	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK225921|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg19_v1_chrX_+_140677834_140677894	1.57017	SOX2.p2	NM_145662|SPANXA2|728712|SPANX family, member A2	AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1
hg19_v1_chr10_-_61122219_61122351	1.56583	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg19_v1_chr6_+_122720750_122720882	1.5657	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr5_-_138210992_138211035	1.56421	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr10_+_115511212_115511212	1.56193	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chrX_+_142113703_142113800	1.55382	SOX2.p2	BC130503|SPANXN4|441525|SPANX family, member N4	BC130505|SPANXN4|441525|SPANX family, member N4	NM_001009613|SPANXN4|441525|SPANX family, member N4	HQ258561|SPANXN4|441525|SPANX family, member N4	DQ336126|SPANXN4|441525|SPANX family, member N4	DQ336127|SPANXN4|441525|SPANX family, member N4
hg19_v1_chr5_-_96478460_96478491	1.54789	SOX2.p2	AK307885|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr2_+_74120132_74120143	1.54716	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr17_+_37784750_37784773	1.54704	SOX2.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg19_v1_chr6_+_122720685_122720706	1.54607	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_001243094|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg19_v1_chrX_+_36254050_36254050	1.54536	SOX2.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg19_v1_chr5_+_71502700_71502827	1.54304	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr12_-_18243052_18243113	1.54211	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr1_-_110283659_110283659	1.53899	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg19_v1_chr12_-_95945226_95945262	1.53801	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg19_v1_chr1_-_226926875_226927002	1.53673	SOX2.p2	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B
hg19_v1_chr18_-_74728963_74729028	1.53534	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr1_-_173174611_173174696	1.53369	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg19_v1_chr13_+_100633977_100634063	1.5315	SOX2.p2	NM_007129|ZIC2|7546|Zic family member 2
hg19_v1_chr17_+_68071386_68071475	1.53063	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr8_+_7353367_7353467	1.52967	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg19_v1_chr10_+_29577989_29578044	1.52848	SOX2.p2	NM_032517|LYZL1|84569|lysozyme-like 1	BC021730|LYZL1|84569|lysozyme-like 1	AY358694|LYZL1|84569|lysozyme-like 1
hg19_v1_chr3_-_169487602_169487682	1.52546	SOX2.p2	BC007289|ARPM1|84517|actin related protein M1	AK055346|ARPM1|84517|actin related protein M1	NM_032487|ARPM1|84517|actin related protein M1
hg19_v1_chr9_+_91003238_91003428	1.52271	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg19_v1_chr6_+_97010423_97010516	1.52217	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg19_v1_chr18_+_32073245_32073284	1.52157	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr12_-_11548485_11548497	1.52155	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg19_v1_chr13_-_38443859_38443938	1.51791	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg19_v1_chr5_-_179107974_179107974	1.51781	SOX2.p2	NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)
hg19_v1_chr11_+_18433845_18433930	1.51705	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg19_v1_chr5_-_27038650_27038692	1.51007	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg19_v1_chr16_-_75528925_75528925	1.50932	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg19_v1_chr6_-_127840499_127840499	1.50835	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg19_v1_chr9_+_91003987_91004010	1.50523	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chr8_+_75736771_75736771	1.50474	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg19_v1_chrX_+_28605558_28605680	1.50141	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr4_+_134073180_134073387	1.50054	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg19_v1_chr16_-_75529278_75529281	1.49669	SOX2.p2	
hg19_v1_chr6_+_42123143_42123183	1.49571	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg19_v1_chr3_-_139258477_139258489	1.49524	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr11_-_79151694_79151755	1.49181	SOX2.p2	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)
hg19_v1_chrX_-_142723921_142723925	1.49117	SOX2.p2	NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg19_v1_chr7_-_107880492_107880613	1.48963	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr1_-_153044083_153044083	1.48942	SOX2.p2	NM_001017418|SPRR2B|6701|small proline-rich protein 2B
hg19_v1_chr12_-_122240827_122240888	1.48876	SOX2.p2	
hg19_v1_chr8_+_85095702_85095768	1.48845	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr11_+_61248584_61248652	1.48303	SOX2.p2	NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32
hg19_v1_chr20_+_17207669_17207674	1.48166	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr19_+_55888203_55888203	1.47982	SOX2.p2	AF442729|TMEM190|147744|transmembrane protein 190	BC128189|TMEM190|147744|transmembrane protein 190	BC128190|TMEM190|147744|transmembrane protein 190	NM_139172|TMEM190|147744|transmembrane protein 190
hg19_v1_chr13_+_53602829_53602995	1.47767	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	HQ258281|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg19_v1_chrX_-_140336628_140336647	1.4767	SOX2.p2	AJ238277|SPANXC|64663|SPANX family, member C	NM_022661|SPANXC|64663|SPANX family, member C	BC054023|SPANXC|64663|SPANX family, member C	AK225988|SPANXC|64663|SPANX family, member C
hg19_v1_chr7_+_134464372_134464407	1.47448	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr8_+_124194751_124194829	1.47388	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr22_+_43808011_43808023	1.47226	SOX2.p2	AK290541|MPPED1|758|metallophosphoesterase domain containing 1	AK297276|MPPED1|758|metallophosphoesterase domain containing 1	AK299516|MPPED1|758|metallophosphoesterase domain containing 1	AK299531|MPPED1|758|metallophosphoesterase domain containing 1	NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1
hg19_v1_chr16_-_15835382_15835512	1.46829	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg19_v1_chr5_-_16936371_16936400	1.46828	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg19_v1_chr17_+_30814708_30814813	1.46435	SOX2.p2	
hg19_v1_chr10_+_60936508_60936613	1.46371	SOX2.p2	BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr9_+_123850573_123850604	1.45949	SOX2.p2	NM_007018|CNTRL|11064|centriolin	BC137284|CNTRL|11064|centriolin	BC137286|CNTRL|11064|centriolin	AF513978|CNTRL|11064|centriolin
hg19_v1_chrX_+_100224696_100224696	1.45201	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg19_v1_chr9_-_8733893_8733945	1.45135	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr5_+_86563594_86563777	1.44909	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr1_+_147374945_147374945	1.44817	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg19_v1_chrX_-_114252132_114252216	1.44451	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chr5_-_22853730_22853730	1.44001	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr7_-_143059144_143059172	1.43889	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr12_-_28124915_28124915	1.43624	SOX2.p2	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr14_+_24540742_24540797	1.4304	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg19_v1_chr7_-_88425030_88425030	1.42856	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg19_v1_chr11_+_60691911_60691959	1.42851	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg19_v1_chr20_+_55099784_55099823	1.42805	SOX2.p2	NM_001012971|FAM209A|200232|family with sequence similarity 209, member A	BC029411|FAM209A|200232|family with sequence similarity 209, member A	BC105792|FAM209B|388799|family with sequence similarity 209, member B	BC107704|FAM209A|200232|family with sequence similarity 209, member A	BC070179|FAM209A|200232|family with sequence similarity 209, member A
hg19_v1_chr16_-_20416032_20416058	1.42462	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg19_v1_chr7_-_86688944_86689013	1.42452	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr19_+_11649578_11649740	1.42348	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle
hg19_v1_chr10_+_49514652_49514920	1.42139	SOX2.p2	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg19_v1_chr2_-_217540722_217540847	1.42003	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg19_v1_chr8_-_74171736_74171736	1.41664	SOX2.p2	BC150551|LOC100130301|100130301|uncharacterized LOC100130301	BC150552|LOC100130301|100130301|uncharacterized LOC100130301	NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301
hg19_v1_chr2_-_170218972_170218991	1.41645	SOX2.p2	AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2	AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2
hg19_v1_chr1_-_183387501_183387736	1.41536	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg19_v1_chr5_+_79615789_79615842	1.41302	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg19_v1_chr19_+_751108_751151	1.41151	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg19_v1_chr12_-_16758839_16758903	1.40937	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr7_-_16844606_16844737	1.4083	SOX2.p2	BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)
hg19_v1_chr22_-_45404785_45404873	1.40372	SOX2.p2	AK299836|PHF21B|112885|PHD finger protein 21B	AK297317|PHF21B|112885|PHD finger protein 21B	AK091480|PHF21B|112885|PHD finger protein 21B	NM_001242450|PHF21B|112885|PHD finger protein 21B
hg19_v1_chr1_-_53793583_53793742	1.39853	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr22_-_39052579_39052633	1.39771	SOX2.p2	NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr15_+_80696569_80696899	1.39745	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chrX_+_65384078_65384206	1.39718	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr11_-_35440514_35440909	1.39669	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr5_-_111091947_111091947	1.38884	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr4_+_41983712_41983839	1.388	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg19_v1_chr7_-_96654128_96654261	1.38569	SOX2.p2	BC006226|DLX5|1749|distal-less homeobox 5	AK023493|DLX5|1749|distal-less homeobox 5	NM_005221|DLX5|1749|distal-less homeobox 5	AK297614|DLX5|1749|distal-less homeobox 5
hg19_v1_chrX_-_99891690_99891847	1.38282	SOX2.p2	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg19_v1_chrX_+_134124967_134124967	1.3786	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chr15_-_82336880_82336886	1.37578	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr3_-_48700317_48700354	1.37472	SOX2.p2	AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)	NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
hg19_v1_chr3_+_57094468_57094539	1.36939	SOX2.p2	AY221117|SPATA12|353324|spermatogenesis associated 12	NM_181727|SPATA12|353324|spermatogenesis associated 12	BC126274|SPATA12|353324|spermatogenesis associated 12	BC136498|SPATA12|353324|spermatogenesis associated 12
hg19_v1_chr8_+_85095452_85095466	1.36821	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr5_+_140514787_140515017	1.36735	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg19_v1_chrX_+_149613719_149613846	1.36407	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chr15_+_52043738_52043908	1.36381	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg19_v1_chr7_-_111846384_111846540	1.36246	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr2_-_72374919_72374965	1.36233	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v1_chr7_+_39017608_39017608	1.35904	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg19_v1_chrX_-_140786561_140786654	1.3528	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg19_v1_chr11_+_131780537_131780711	1.35224	SOX2.p2	NM_001144058|NTM|50863|neurotrimin	NM_001144059|NTM|50863|neurotrimin	NM_016522|NTM|50863|neurotrimin
hg19_v1_chr6_-_89927495_89927495	1.35142	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr8_+_73449625_73449662	1.35062	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg19_v1_chr3_+_3841079_3841120	1.35028	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg19_v1_chr4_+_48485276_48485578	1.34828	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg19_v1_chr19_+_42806249_42806283	1.34534	SOX2.p2	BC063021|PRR19|284338|proline rich 19	AK291528|PRR19|284338|proline rich 19	NM_199285|PRR19|284338|proline rich 19
hg19_v1_chr17_+_48638339_48638448	1.34407	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr11_+_10830752_10830843	1.33827	SOX2.p2	
hg19_v1_chr3_-_125655881_125655886	1.33316	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg19_v1_chr7_-_16505292_16505473	1.33307	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg19_v1_chr5_+_147648374_147648422	1.33071	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr7_-_32110979_32111044	1.3294	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v1_chr12_-_10573041_10573193	1.32869	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg19_v1_chrX_+_147582133_147582243	1.32801	SOX2.p2	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg19_v1_chr16_+_58497628_58497648	1.32558	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr12_-_25801487_25801487	1.32422	SOX2.p2	AK296816|IFLTD1|160492|intermediate filament tail domain containing 1	NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1
hg19_v1_chr8_+_7345190_7345242	1.32355	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg19_v1_chr8_+_54764367_54764459	1.32282	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr3_-_155394104_155394204	1.32116	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr3_+_113616317_113616402	1.31928	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chr14_-_60097531_60097536	1.31457	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr1_-_41487386_41487426	1.31452	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg19_v1_chr17_+_57297827_57297970	1.31396	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v1_chr8_-_7681359_7681411	1.31033	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg19_v1_chr11_-_123756339_123756339	1.30539	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg19_v1_chr8_+_7693992_7693992	1.30526	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg19_v1_chr15_+_80733579_80733631	1.30158	SOX2.p2	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chr7_-_112727778_112727783	1.30105	SOX2.p2	BC030577|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr8_+_10530146_10530173	1.30013	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74	HQ258143|C8orf74|203076|chromosome 8 open reading frame 74
hg19_v1_chr22_+_39883228_39883352	1.29978	SOX2.p2	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg19_v1_chr15_+_48010685_48010685	1.29516	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v1_chr18_+_32398225_32398411	1.28751	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr1_+_120254418_120254645	1.28743	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr20_-_44144263_44144263	1.28651	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg19_v1_chr12_-_45270071_45270139	1.28521	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr17_-_46703613_46703964	1.28512	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg19_v1_chr7_-_83824216_83824429	1.28484	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v1_chr20_+_9198036_9198081	1.27996	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr12_+_101988746_101988846	1.27921	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr11_+_46402333_46402617	1.27585	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr17_+_31254927_31254927	1.27415	SOX2.p2	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98
hg19_v1_chr7_+_156435670_156435720	1.27262	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg19_v1_chr8_-_145838887_145838887	1.26993	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg19_v1_chr1_-_193155723_193155742	1.262	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg19_v1_chr3_+_174577069_174577111	1.25957	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v1_chr1_+_183605207_183605477	1.25574	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr5_+_140613937_140613963	1.25515	SOX2.p2	AK095496|PCDHB18|54660|protocadherin beta 18 pseudogene
hg19_v1_chrX_-_73834427_73834429	1.25277	SOX2.p2	
hg19_v1_chr3_-_57199313_57199353	1.2522	SOX2.p2	AF458067|IL17RD|54756|interleukin 17 receptor D
hg19_v1_chr8_+_79578258_79578383	1.25104	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg19_v1_chr9_+_115249357_115249468	1.25038	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg19_v1_chr7_-_55930444_55930481	1.25011	SOX2.p2	AK301928|SEPT14|346288|septin 14	NM_207366|SEPT14|346288|septin 14
hg19_v1_chrX_+_100805415_100805588	1.24693	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr10_-_49482912_49482940	1.24661	SOX2.p2	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2	NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2
hg19_v1_chr5_-_131879172_131879213	1.24448	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg19_v1_chr7_+_94292737_94292755	1.23973	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chr12_-_11036815_11036873	1.2389	SOX2.p2	BC128192|PRH1|5554|proline-rich protein HaeIII subfamily 1	BC133676|PRH1|5554|proline-rich protein HaeIII subfamily 1	K03203|PRH1|5554|proline-rich protein HaeIII subfamily 1	NM_006250|PRH1|5554|proline-rich protein HaeIII subfamily 1
hg19_v1_chr20_-_44298877_44298908	1.23844	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg19_v1_chr14_-_24020766_24020874	1.23591	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg19_v1_chr3_-_62359189_62359189	1.23584	SOX2.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg19_v1_chr11_-_18062304_18062334	1.2328	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg19_v1_chr22_-_50523670_50523715	1.2324	SOX2.p2	AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr5_+_131993864_131993917	1.2312	SOX2.p2	BC096138|IL13|3596|interleukin 13	BC096139|IL13|3596|interleukin 13	BC096140|IL13|3596|interleukin 13	BC096141|IL13|3596|interleukin 13	NM_002188|IL13|3596|interleukin 13	X69079|IL13|3596|interleukin 13	L06801|IL13|3596|interleukin 13	AF043334|IL13|3596|interleukin 13
hg19_v1_chrX_-_18690187_18690222	1.22933	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr9_-_19033183_19033255	1.22779	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg19_v1_chr17_+_27920479_27920526	1.22779	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg19_v1_chr3_+_178276487_178276617	1.22741	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr7_+_142560512_142560518	1.22676	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg19_v1_chr22_-_39052306_39052420	1.22429	SOX2.p2	AK301819|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr13_-_84456424_84456427	1.22059	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr15_+_59908908_59909017	1.22046	SOX2.p2	AK312852|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr12_+_64237381_64238072	1.21978	SOX2.p2	
hg19_v1_chr5_+_140165875_140165875	1.21938	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr3_+_115342150_115342150	1.2152	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43
hg19_v1_chr5_-_147162056_147162132	1.21436	SOX2.p2	BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr1_+_40713572_40713639	1.21171	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg19_v1_chr4_+_54243810_54243821	1.21049	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr3_-_167191808_167191833	1.20556	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr7_-_141541220_141541284	1.20512	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg19_v1_chrX_-_110513665_110513743	1.20439	SOX2.p2	AF029232|CAPN6|827|calpain 6	AK312701|CAPN6|827|calpain 6
hg19_v1_chr20_-_42355566_42355641	1.20435	SOX2.p2	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg19_v1_chr5_-_146889420_146889512	1.20164	SOX2.p2	EU007906|DPYSL3|1809|dihydropyrimidinase-like 3	EU832163|DPYSL3|1809|dihydropyrimidinase-like 3	EU832257|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chrX_+_80457597_80457699	1.20142	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr19_+_35606731_35606798	1.20117	SOX2.p2	NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3	BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3	U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3
hg19_v1_chr7_+_129906702_129906727	1.19906	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg19_v1_chr2_+_74120092_74120111	1.19741	SOX2.p2	NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr6_-_11779279_11779279	1.19569	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg19_v1_chr7_+_5632453_5632567	1.18911	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr2_-_107503517_107503576	1.18664	SOX2.p2	AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v1_chr2_-_39456672_39456736	1.18619	SOX2.p2	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4	AY847283|CDKL4|344387|cyclin-dependent kinase-like 4	NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4	BC144460|CDKL4|344387|cyclin-dependent kinase-like 4
hg19_v1_chr17_-_48072566_48072590	1.18419	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg19_v1_chr7_+_106505876_106505982	1.18173	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr4_+_128554079_128554200	1.17966	SOX2.p2	NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)
hg19_v1_chr11_+_112832089_112832174	1.17735	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chrX_+_153030956_153030966	1.17668	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg19_v1_chr7_-_91794589_91794589	1.17449	SOX2.p2	NM_001161528|LRRD1|401387|leucine-rich repeats and death domain containing 1
hg19_v1_chr10_+_73723992_73724122	1.17353	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v1_chr9_-_3223007_3223066	1.16764	SOX2.p2	
hg19_v1_chr2_-_2335080_2335089	1.16715	SOX2.p2	AK307797|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr16_+_76311175_76311305	1.16679	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg19_v1_chr13_+_58205788_58205788	1.16042	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr5_+_140174443_140174549	1.16031	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg19_v1_chr15_-_58306185_58306294	1.16006	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg19_v1_chr2_+_16080639_16080737	1.15994	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr12_+_130647002_130647019	1.15789	SOX2.p2	BC070037|FZD10|11211|frizzled family receptor 10	NM_007197|FZD10|11211|frizzled family receptor 10
hg19_v1_chr5_-_176037091_176037183	1.15607	SOX2.p2	BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1
hg19_v1_chr6_-_46293215_46293392	1.15451	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr11_+_112832281_112832332	1.15439	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr1_-_154178783_154178898	1.15146	SOX2.p2	HQ258701|C1orf189|388701|chromosome 1 open reading frame 189	NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189	BC127710|C1orf189|388701|chromosome 1 open reading frame 189	BC130509|C1orf189|388701|chromosome 1 open reading frame 189
hg19_v1_chr4_+_54243731_54243808	1.14902	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr6_-_52668599_52668764	1.14693	SOX2.p2	BC053578|GSTA1|2938|glutathione S-transferase alpha 1	BC110891|GSTA1|2938|glutathione S-transferase alpha 1	M15872|GSTA1|2938|glutathione S-transferase alpha 1	AK293371|GSTA1|2938|glutathione S-transferase alpha 1	M14777|GSTA1|2938|glutathione S-transferase alpha 1	M21758|GSTA1|2938|glutathione S-transferase alpha 1	M25627|GSTA1|2938|glutathione S-transferase alpha 1	NM_145740|GSTA1|2938|glutathione S-transferase alpha 1	AK310324|GSTA1|2938|glutathione S-transferase alpha 1
hg19_v1_chr14_-_88793250_88793255	1.14686	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr7_-_14031049_14031049	1.14561	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg19_v1_chr3_+_97158453_97158489	1.14369	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg19_v1_chr1_-_198906536_198906559	1.14224	SOX2.p2	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor
hg19_v1_chrX_-_43832920_43832920	1.13833	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr1_-_182642016_182642066	1.13737	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg19_v1_chr19_-_14169970_14169970	1.13644	SOX2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg19_v1_chr1_-_200992510_200992598	1.13637	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg19_v1_chr2_+_215276460_215276460	1.13598	SOX2.p2	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like
hg19_v1_chr1_+_50575465_50575612	1.13527	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr15_-_33360084_33360387	1.13508	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr2_-_158182154_158182415	1.13363	SOX2.p2	HQ447390|ERMN|57471|ermin, ERM-like protein	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg19_v1_chr17_-_36831156_36831214	1.13282	SOX2.p2	NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96
hg19_v1_chr12_-_16757944_16758080	1.13218	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr12_-_52886971_52887180	1.13044	SOX2.p2	BT006899|KRT6A|3853|keratin 6A	BC125058|KRT6A|3853|keratin 6A	BC139753|KRT6A|3853|keratin 6A	DQ890619|KRT6A|3853|keratin 6A	DQ893788|KRT6A|3853|keratin 6A	BC069269|KRT6A|3853|keratin 6A	BC008807|KRT6A|3853|keratin 6A	BC014152|KRT6A|3853|keratin 6A	AK299386|KRT6A|3853|keratin 6A	AK299428|KRT6A|3853|keratin 6A	AK301686|KRT6A|3853|keratin 6A	AK290245|KRT6A|3853|keratin 6A	NM_005554|KRT6A|3853|keratin 6A
hg19_v1_chr4_+_150999412_150999638	1.12814	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg19_v1_chr10_-_105845619_105845640	1.12786	SOX2.p2	BC004478|COL17A1|1308|collagen, type XVII, alpha 1	D63465|COL17A1|1308|collagen, type XVII, alpha 1	NM_000494|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr18_+_63417487_63417487	1.12739	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg19_v1_chr3_+_115342302_115342536	1.12697	SOX2.p2	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg19_v1_chr8_+_22210311_22210342	1.1268	SOX2.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg19_v1_chr2_-_9143742_9143901	1.1261	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg19_v1_chr1_-_228604582_228604588	1.12548	SOX2.p2	NM_001024940|TRIM17|51127|tripartite motif containing 17	NM_001134855|TRIM17|51127|tripartite motif containing 17	NM_016102|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr11_+_125703210_125703210	1.12484	SOX2.p2	AK123042|PATE4|399968|prostate and testis expressed 4	AK311509|PATE4|399968|prostate and testis expressed 4	NM_001144874|PATE4|399968|prostate and testis expressed 4
hg19_v1_chr3_-_114343052_114343052	1.12155	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr15_-_89764809_89765003	1.12108	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg19_v1_chr2_-_213403280_213403351	1.12085	SOX2.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg19_v1_chr17_+_31255170_31255236	1.12059	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg19_v1_chr19_-_47164289_47164452	1.1204	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg19_v1_chr7_+_5632435_5632441	1.1192	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr11_-_62783281_62783316	1.11458	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg19_v1_chr9_-_91267004_91267074	1.10855	SOX2.p2	BC101432|LOC286238|286238|uncharacterized LOC286238	BC101439|LOC286238|286238|uncharacterized LOC286238	BC101440|LOC286238|286238|uncharacterized LOC286238	BC101442|LOC286238|286238|uncharacterized LOC286238	AK098532|LOC286238|286238|uncharacterized LOC286238	NM_001100111|LOC286238|286238|uncharacterized LOC286238
hg19_v1_chr8_-_22014263_22014343	1.105	SOX2.p2	AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3	BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3	BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3	AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3	NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3
hg19_v1_chr20_-_17511973_17512012	1.10371	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr11_-_10673832_10673922	1.10265	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr4_+_15429628_15429667	1.10228	SOX2.p2	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr4_+_88571453_88571458	1.10133	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr8_-_18666295_18666404	1.10029	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr4_-_138453628_138453657	1.10008	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg19_v1_chr19_+_13134782_13134827	1.09785	SOX2.p2	AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr1_+_212797788_212797815	1.0962	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg19_v1_chr7_+_69064580_69064596	1.09416	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg19_v1_chr9_-_130712866_130712997	1.0941	SOX2.p2	BC137087|FAM102A|399665|family with sequence similarity 102, member A	BC137088|FAM102A|399665|family with sequence similarity 102, member A	BC047949|FAM102A|399665|family with sequence similarity 102, member A	NM_203305|FAM102A|399665|family with sequence similarity 102, member A	BC142952|FAM102A|399665|family with sequence similarity 102, member A
hg19_v1_chr17_+_58499854_58499905	1.09336	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg19_v1_chr1_-_120439117_120439146	1.09105	SOX2.p2	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30
hg19_v1_chr20_+_55108265_55108301	1.09051	SOX2.p2	BC014951|FAM209B|388799|family with sequence similarity 209, member B	NM_001013646|FAM209B|388799|family with sequence similarity 209, member B
hg19_v1_chr6_-_136788012_136788012	1.09042	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr9_-_140142165_140142221	1.08803	SOX2.p2	HQ258370|FAM166A|401565|family with sequence similarity 166, member A	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg19_v1_chr3_-_164796275_164796282	1.08717	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr1_+_12806162_12806171	1.08443	SOX2.p2	BC029894|C1orf158|93190|chromosome 1 open reading frame 158	NM_152290|C1orf158|93190|chromosome 1 open reading frame 158	AK026705|C1orf158|93190|chromosome 1 open reading frame 158	AK298760|C1orf158|93190|chromosome 1 open reading frame 158
hg19_v1_chr2_+_210444154_210444187	1.08435	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr4_+_100432160_100432199	1.08301	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg19_v1_chr2_+_198669316_198669425	1.08008	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg19_v1_chr8_+_63161185_63161227	1.07721	SOX2.p2	AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg19_v1_chr1_-_149889362_149889446	1.07706	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr12_-_81763127_81763192	1.07654	SOX2.p2	AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr12_+_41831484_41831691	1.07563	SOX2.p2	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4	AK131554|PDZRN4|29951|PDZ domain containing ring finger 4	NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4	AK091096|PDZRN4|29951|PDZ domain containing ring finger 4	BC093744|PDZRN4|29951|PDZ domain containing ring finger 4	BC093746|PDZRN4|29951|PDZ domain containing ring finger 4
hg19_v1_chr13_-_45775174_45775174	1.07306	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg19_v1_chr1_+_15272414_15272414	1.07087	SOX2.p2	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg19_v1_chr19_-_42931500_42931577	1.07057	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg19_v1_chr15_+_91643181_91643238	1.07035	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg19_v1_chr11_-_119234628_119234857	1.06992	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr10_-_99393175_99393343	1.06991	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg19_v1_chr3_-_118864881_118864914	1.0686	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg19_v1_chr13_+_78109808_78109894	1.06825	SOX2.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr12_+_70759974_70760559	1.06653	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr2_+_11674241_11674241	1.06398	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr16_+_58497548_58497612	1.06252	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr6_-_99797530_99797530	1.06171	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg19_v1_chr12_-_102591547_102591613	1.06076	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg19_v1_chr7_+_151653463_151653533	1.06	SOX2.p2	NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
hg19_v1_chr14_-_90421032_90421088	1.05957	SOX2.p2	BC001787|EFCAB11|90141|EF-hand calcium binding domain 11	BX247991|EFCAB11|90141|EF-hand calcium binding domain 11	AK298930|EFCAB11|90141|EF-hand calcium binding domain 11	AK094740|EFCAB11|90141|EF-hand calcium binding domain 11	NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11
hg19_v1_chr2_-_175869910_175870116	1.0577	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chr14_+_32798478_32798595	1.05604	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg19_v1_chr17_-_42441123_42441321	1.05549	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg19_v1_chr5_-_176900591_176900650	1.05527	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg19_v1_chr3_-_62860561_62860703	1.05456	SOX2.p2	
hg19_v1_chrX_-_106449543_106449669	1.05433	SOX2.p2	AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like	NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like
hg19_v1_chrX_-_24665454_24665465	1.0508	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr5_+_134303595_134303635	1.05002	SOX2.p2	BC110384|CATSPER3|347732|cation channel, sperm associated 3	NM_178019|CATSPER3|347732|cation channel, sperm associated 3	AK292427|CATSPER3|347732|cation channel, sperm associated 3	AF432876|CATSPER3|347732|cation channel, sperm associated 3	BC101692|CATSPER3|347732|cation channel, sperm associated 3
hg19_v1_chr1_-_225840660_225840915	1.04707	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg19_v1_chr18_-_74729049_74729086	1.04633	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg19_v1_chr5_-_41071404_41071443	1.04306	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg19_v1_chr7_+_94292816_94292946	1.04266	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr12_-_122107559_122107559	1.04102	SOX2.p2	BC057760|MORN3|283385|MORN repeat containing 3	NM_173855|MORN3|283385|MORN repeat containing 3
hg19_v1_chr5_+_140566655_140566893	1.0401	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg19_v1_chr19_-_55691468_55691719	1.03944	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg19_v1_chr7_-_16921596_16921612	1.03939	SOX2.p2	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)
hg19_v1_chr20_+_11898536_11898579	1.03934	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg19_v1_chr8_+_28351694_28351837	1.03854	SOX2.p2	NM_017412|FZD3|7976|frizzled family receptor 3	NM_145866|FZD3|7976|frizzled family receptor 3	AK291480|FZD3|7976|frizzled family receptor 3	AB039723|FZD3|7976|frizzled family receptor 3
hg19_v1_chr5_+_140749830_140749961	1.03681	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chrX_+_96138906_96139035	1.03543	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg19_v1_chr5_+_140529619_140529838	1.03003	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr3_+_178254223_178254223	1.0289	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr15_-_31947541_31947541	1.02836	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr1_-_68915631_68915641	1.02719	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg19_v1_chr9_+_18474078_18474098	1.02101	SOX2.p2	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr4_-_57547845_57547871	1.02046	SOX2.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chr6_-_46293404_46293410	1.01685	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr11_+_46299554_46299567	1.01478	SOX2.p2	BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg19_v1_chr14_+_77648082_77648102	1.01288	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg19_v1_chr2_-_107502459_107502511	1.01264	SOX2.p2	
hg19_v1_chrX_-_73834430_73834448	1.01182	SOX2.p2	AK001334|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chrX_-_110513750_110513777	1.01083	SOX2.p2	AJ000388|CAPN6|827|calpain 6	NM_014289|CAPN6|827|calpain 6
hg19_v1_chrX_-_73834410_73834424	1.01056	SOX2.p2	AF155109|RLIM|51132|ring finger protein, LIM domain interacting	BC013357|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr16_+_31085751_31085778	1.01044	SOX2.p2	BC035589|ZNF646|9726|zinc finger protein 646
hg19_v1_chr12_-_8043743_8043794	1.0099	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v1_chr5_+_140864626_140864743	1.00828	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg19_v1_chr1_-_49242406_49242589	1.00677	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg19_v1_chr12_+_53442972_53443010	1.00578	SOX2.p2	AK172747|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr5_+_140180782_140180782	1.00204	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg19_v1_chr11_+_8060179_8060179	1.00173	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg19_v1_chr20_+_31805118_31805157	1.00166	SOX2.p2	BC041904|BPIFA3|128861|BPI fold containing family A, member 3	NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3	NM_178466|BPIFA3|128861|BPI fold containing family A, member 3	BC066354|BPIFA3|128861|BPI fold containing family A, member 3
hg19_v1_chr22_-_23484208_23484279	1.0006	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg19_v1_chr2_+_29038862_29038880	1.0003	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg19_v1_chr16_-_51184507_51184507	0.998389	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg19_v1_chr11_-_35441501_35441609	0.997541	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr1_+_200993041_200993134	0.995516	SOX2.p2	
hg19_v1_chr1_+_2938045_2938065	0.994352	SOX2.p2	NM_080431|ACTRT2|140625|actin-related protein T2	AK058153|ACTRT2|140625|actin-related protein T2	AK314500|ACTRT2|140625|actin-related protein T2	BC029499|ACTRT2|140625|actin-related protein T2
hg19_v1_chr12_-_6233684_6233835	0.994312	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg19_v1_chr16_-_31085503_31085640	0.99359	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg19_v1_chr6_+_80714389_80714409	0.989256	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg19_v1_chr20_-_170263_170321	0.98905	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg19_v1_chr22_+_31090792_31090898	0.986756	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg19_v1_chr9_+_139221931_139222002	0.985092	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg19_v1_chr7_+_129932973_129933019	0.983233	SOX2.p2	AK290993|CPA4|51200|carboxypeptidase A4	NM_001163446|CPA4|51200|carboxypeptidase A4	NM_016352|CPA4|51200|carboxypeptidase A4	BC052289|CPA4|51200|carboxypeptidase A4	AK310933|CPA4|51200|carboxypeptidase A4	AK298553|CPA4|51200|carboxypeptidase A4	AK298550|CPA4|51200|carboxypeptidase A4	AK299023|CPA4|51200|carboxypeptidase A4	AY358699|CPA4|51200|carboxypeptidase A4	AF095719|CPA4|51200|carboxypeptidase A4	HQ448429|CPA4|51200|carboxypeptidase A4
hg19_v1_chr22_+_27017927_27017935	0.982982	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg19_v1_chr4_+_54243822_54243828	0.982906	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr16_+_31085722_31085746	0.979428	SOX2.p2	NM_014699|ZNF646|9726|zinc finger protein 646	AK304808|ZNF646|9726|zinc finger protein 646
hg19_v1_chr3_-_151034514_151034635	0.976483	SOX2.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg19_v1_chr6_+_72926462_72926462	0.975297	SOX2.p2	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr5_+_138677570_138677617	0.972877	SOX2.p2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr14_-_58618807_58618906	0.971698	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr5_+_57878901_57878938	0.971329	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr7_-_86595203_86595290	0.9707	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr4_+_81256873_81256922	0.969684	SOX2.p2	BC034296|C4orf22|255119|chromosome 4 open reading frame 22	NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22	NM_152770|C4orf22|255119|chromosome 4 open reading frame 22	AK128642|C4orf22|255119|chromosome 4 open reading frame 22	AY349359|C4orf22|255119|chromosome 4 open reading frame 22	DQ893197|C4orf22|255119|chromosome 4 open reading frame 22	DQ893198|C4orf22|255119|chromosome 4 open reading frame 22	DQ896152|C4orf22|255119|chromosome 4 open reading frame 22	DQ896153|C4orf22|255119|chromosome 4 open reading frame 22	DQ896154|C4orf22|255119|chromosome 4 open reading frame 22	DQ896534|C4orf22|255119|chromosome 4 open reading frame 22	DQ896535|C4orf22|255119|chromosome 4 open reading frame 22
hg19_v1_chr17_-_2996289_2996289	0.967775	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg19_v1_chrX_-_50557019_50557203	0.965176	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg19_v1_chr11_+_196760_196794	0.963342	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg19_v1_chr5_+_140557370_140557370	0.958808	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg19_v1_chrX_+_92929011_92929011	0.955294	SOX2.p2	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A	NM_001171110|FAM133A|286499|family with sequence similarity 133, member A	NM_001171111|FAM133A|286499|family with sequence similarity 133, member A	NM_173698|FAM133A|286499|family with sequence similarity 133, member A
hg19_v1_chr3_+_123813527_123813684	0.952498	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chr12_-_85430054_85430054	0.952405	SOX2.p2	AK126325|TSPAN19|144448|tetraspanin 19	NM_001100917|TSPAN19|144448|tetraspanin 19
hg19_v1_chr18_+_11751470_11751561	0.952156	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chr6_+_123317377_123317389	0.949666	SOX2.p2	AK295158|CLVS2|134829|clavesin 2
hg19_v1_chr12_+_124773709_124773709	0.947563	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg19_v1_chr9_+_18474138_18474228	0.946856	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr5_+_86563819_86563833	0.945072	SOX2.p2	
hg19_v1_chr12_+_79439432_79439471	0.944619	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg19_v1_chr12_-_42877743_42877774	0.943364	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr1_+_100818031_100818050	0.942263	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr5_-_32388595_32388645	0.939281	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr12_+_121570630_121570773	0.939254	SOX2.p2	NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7
hg19_v1_chrX_+_152912655_152912826	0.938446	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr11_-_85437457_85437510	0.93803	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr16_+_6069094_6069356	0.93785	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v1_chr20_+_61448391_61448416	0.937118	SOX2.p2	BC011705|COL9A3|1299|collagen, type IX, alpha 3	NM_001853|COL9A3|1299|collagen, type IX, alpha 3	DQ892946|COL9A3|1299|collagen, type IX, alpha 3	DQ896194|COL9A3|1299|collagen, type IX, alpha 3	L41162|COL9A3|1299|collagen, type IX, alpha 3
hg19_v1_chr6_-_136847743_136847851	0.936086	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr7_-_19812403_19812403	0.935619	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg19_v1_chr2_-_107502609_107502630	0.935546	SOX2.p2	AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v1_chr17_-_74639719_74639893	0.934157	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg19_v1_chr14_+_69726868_69727007	0.932593	SOX2.p2	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr22_-_19512859_19512859	0.931138	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5
hg19_v1_chr2_+_177028804_177028804	0.930812	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg19_v1_chr11_-_35441099_35441107	0.929259	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr9_+_91926109_91926207	0.928696	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr8_-_42623928_42623928	0.928458	SOX2.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr4_-_189026401_189026407	0.928151	SOX2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg19_v1_chrX_+_144908927_144909195	0.927648	SOX2.p2	NM_004709|CXorf1|9142|chromosome X open reading frame 1	Y08902|CXorf1|9142|chromosome X open reading frame 1	BC113600|CXorf1|9142|chromosome X open reading frame 1	BC113604|CXorf1|9142|chromosome X open reading frame 1	HQ258719|CXorf1|9142|chromosome X open reading frame 1
hg19_v1_chr12_-_16760935_16761147	0.926594	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr9_-_88874518_88874549	0.9256	SOX2.p2	NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153	BC108665|C9orf153|389766|chromosome 9 open reading frame 153
hg19_v1_chr5_+_140797210_140797222	0.925447	SOX2.p2	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr13_+_22245083_22245214	0.92279	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg19_v1_chr14_+_21214098_21214127	0.922121	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg19_v1_chr7_+_140774031_140774031	0.921635	SOX2.p2	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like
hg19_v1_chr6_+_72596405_72596451	0.921336	SOX2.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr5_+_140593508_140593537	0.920654	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg19_v1_chr5_+_140797270_140797426	0.919191	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr10_+_26505593_26505738	0.918227	SOX2.p2	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v1_chr6_-_49681245_49681298	0.916612	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg19_v1_chr15_+_23810808_23810928	0.91495	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr1_-_43424536_43424608	0.914007	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr5_-_147162251_147162257	0.913058	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr6_+_79787548_79787573	0.911876	SOX2.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chrX_+_89176939_89177084	0.911107	SOX2.p2	BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked
hg19_v1_chr11_-_10715160_10715174	0.909885	SOX2.p2	AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog	AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr8_+_87878672_87878675	0.90891	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg19_v1_chr10_+_35464514_35464549	0.90864	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chr6_-_134373618_134373788	0.907119	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v1_chr4_-_168155691_168155717	0.90696	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v1_chr13_+_37248048_37248156	0.90645	SOX2.p2	BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1	NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1	AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1
hg19_v1_chr9_-_28719302_28719302	0.903879	SOX2.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg19_v1_chr5_+_125800786_125800846	0.901621	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chrX_+_22291029_22291108	0.900825	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645	HQ258412|ZNF645|158506|zinc finger protein 645	HQ258552|ZNF645|158506|zinc finger protein 645
hg19_v1_chrX_-_117119282_117119375	0.900612	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr11_+_118478305_118478450	0.900547	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg19_v1_chr19_-_44143943_44144031	0.900412	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg19_v1_chr9_+_130026755_130026860	0.899088	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg19_v1_chr2_-_142889269_142889269	0.89798	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr8_+_143545376_143545376	0.897314	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg19_v1_chr8_-_93029864_93029907	0.896798	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr10_-_98273444_98273682	0.894402	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg19_v1_chr18_-_25756946_25757128	0.894037	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr11_+_62475165_62475184	0.889736	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg19_v1_chr7_+_128095881_128096051	0.889656	SOX2.p2	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated	NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated	AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated
hg19_v1_chr1_+_11751778_11751829	0.887204	SOX2.p2	BC111064|C1orf187|374946|chromosome 1 open reading frame 187	NM_198545|C1orf187|374946|chromosome 1 open reading frame 187	AK075558|C1orf187|374946|chromosome 1 open reading frame 187	AY358750|C1orf187|374946|chromosome 1 open reading frame 187
hg19_v1_chr1_+_43613593_43613593	0.885875	SOX2.p2	NM_001101376|FAM183A|440585|family with sequence similarity 183, member A
hg19_v1_chr15_-_65670325_65670377	0.883975	SOX2.p2	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3
hg19_v1_chr17_+_28256873_28256920	0.882636	SOX2.p2	AK302745|EFCAB5|374786|EF-hand calcium binding domain 5	AK303060|EFCAB5|374786|EF-hand calcium binding domain 5	NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5	AK299608|EFCAB5|374786|EF-hand calcium binding domain 5
hg19_v1_chr9_+_82187469_82187579	0.882349	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v1_chr11_-_83984230_83984322	0.881797	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr6_-_52628272_52628360	0.881733	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg19_v1_chr4_-_176734181_176734181	0.881471	SOX2.p2	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg19_v1_chr2_+_189157551_189157612	0.880797	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr5_+_140729723_140729827	0.880507	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr1_+_151032880_151032893	0.88005	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr1_+_209602164_209602167	0.879645	SOX2.p2	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)
hg19_v1_chr22_+_38382170_38382175	0.877972	SOX2.p2	AK098727|LOC100131530|100131530|uncharacterized LOC100131530
hg19_v1_chr1_+_151032866_151032873	0.877893	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr1_-_86043932_86044049	0.877424	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chrY_+_3447081_3447285	0.877234	SOX2.p2	AK292609|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	AF332223|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	NM_139214|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101143|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101146|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC128604|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked
hg19_v1_chr11_+_89392464_89392464	0.875536	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg19_v1_chrX_-_117107700_117107759	0.875479	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr8_+_70405027_70405051	0.874608	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg19_v1_chr5_-_95018659_95018713	0.874325	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg19_v1_chr1_-_108786663_108786702	0.872877	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg19_v1_chr1_+_151032906_151032912	0.87254	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr4_+_76995862_76995876	0.871722	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg19_v1_chr5_+_140602914_140603078	0.871213	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg19_v1_chr1_+_200708604_200708738	0.868764	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr12_+_21525801_21525855	0.867116	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg19_v1_chr7_-_83270746_83270746	0.866729	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr3_+_118864996_118864997	0.866506	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg19_v1_chr3_-_155421996_155421996	0.865108	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr9_-_99064385_99064433	0.863731	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v1_chr22_-_44708730_44708730	0.862687	SOX2.p2	NM_001099294|KIAA1644|85352|KIAA1644
hg19_v1_chr6_+_72926144_72926144	0.862472	SOX2.p2	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr6_+_72596648_72596658	0.860769	SOX2.p2	BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1	BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chrX_-_74145280_74145319	0.860384	SOX2.p2	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg19_v1_chr11_+_112832201_112832212	0.860316	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr4_-_57522469_57522687	0.85949	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg19_v1_chr5_+_78532338_78532471	0.859009	SOX2.p2	
hg19_v1_chr2_+_132480063_132480063	0.856295	SOX2.p2	AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A	NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A
hg19_v1_chrX_-_130423199_130423326	0.855629	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr21_+_18885296_18885447	0.855433	SOX2.p2	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr19_+_30863318_30863443	0.854496	SOX2.p2	BC150171|ZNF536|9745|zinc finger protein 536	AB002388|ZNF536|9745|zinc finger protein 536	BC146757|ZNF536|9745|zinc finger protein 536	NM_014717|ZNF536|9745|zinc finger protein 536	BC132720|ZNF536|9745|zinc finger protein 536	BC132722|ZNF536|9745|zinc finger protein 536
hg19_v1_chr9_-_72287097_72287311	0.853935	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v1_chr9_+_35042222_35042262	0.853824	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr2_-_55559749_55559823	0.85362	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg19_v1_chr16_-_11367451_11367451	0.852919	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg19_v1_chr7_+_129847699_129847717	0.851085	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg19_v1_chr7_+_103969103_103969334	0.850929	SOX2.p2	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3
hg19_v1_chr2_+_166095911_166095954	0.850859	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chr6_-_139094788_139094815	0.850088	SOX2.p2	AK092592|LOC100507462|100507462|uncharacterized LOC100507462	NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462
hg19_v1_chr12_-_67072881_67072924	0.848462	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr4_+_36283243_36283250	0.848219	SOX2.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg19_v1_chr2_+_11680079_11680128	0.845584	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr7_+_73703704_73703871	0.843423	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg19_v1_chr8_-_21645670_21645915	0.842936	SOX2.p2	AY326396|GFRA2|2675|GDNF family receptor alpha 2	AY941828|GFRA2|2675|GDNF family receptor alpha 2	U93703|GFRA2|2675|GDNF family receptor alpha 2	AF002700|GFRA2|2675|GDNF family receptor alpha 2	AK299623|GFRA2|2675|GDNF family receptor alpha 2	U97145|GFRA2|2675|GDNF family receptor alpha 2
hg19_v1_chrX_-_107682600_107682726	0.84268	SOX2.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr5_-_148442606_148442736	0.842515	SOX2.p2	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2
hg19_v1_chr1_-_183387404_183387494	0.839569	SOX2.p2	
hg19_v1_chr1_+_16090993_16091029	0.836553	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr11_+_22359666_22359666	0.835028	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg19_v1_chr20_-_18810838_18810838	0.834212	SOX2.p2	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496
hg19_v1_chr9_-_113100076_113100124	0.834192	SOX2.p2	HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)
hg19_v1_chr8_+_63161499_63161630	0.833414	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg19_v1_chr3_-_112359962_112359992	0.83323	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr10_+_101088794_101088855	0.832004	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr4_-_21699317_21699317	0.831474	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr12_+_53443834_53443966	0.82896	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr15_+_82647307_82647356	0.828267	SOX2.p2	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2
hg19_v1_chr19_+_7660698_7660944	0.827885	SOX2.p2	BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3
hg19_v1_chr1_-_76397975_76398115	0.826369	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg19_v1_chr3_+_44690216_44690276	0.824431	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg19_v1_chr22_+_21986968_21987085	0.823976	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg19_v1_chr21_+_47269874_47269903	0.822495	SOX2.p2	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg19_v1_chr1_-_201476218_201476240	0.822016	SOX2.p2	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr6_+_155538096_155538160	0.820004	SOX2.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg19_v1_chr5_+_169780880_169780880	0.818135	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg19_v1_chr13_-_103054027_103054123	0.817895	SOX2.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg19_v1_chr12_+_48722762_48722814	0.817441	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg19_v1_chr8_-_27115897_27115927	0.816239	SOX2.p2	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg19_v1_chr14_-_88737160_88737273	0.812664	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr12_-_42877785_42877814	0.812149	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr8_-_27115935_27115980	0.810544	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chr1_-_117210301_117210466	0.81035	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr2_+_196521470_196521681	0.809679	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr1_-_244006885_244006885	0.80882	SOX2.p2	AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)	NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
hg19_v1_chrX_+_70443055_70443146	0.807672	SOX2.p2	NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa	BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa	AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa	BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa
hg19_v1_chr8_-_24814028_24814132	0.807077	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg19_v1_chr16_+_57673206_57673429	0.806302	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg19_v1_chr5_+_31193852_31193902	0.805679	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr3_+_98216447_98216524	0.805239	SOX2.p2	BC136724|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	BC136725|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	NM_001004737|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2
hg19_v1_chr4_-_83350829_83351248	0.803205	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr3_-_112359863_112359904	0.803045	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr16_+_24266873_24266875	0.802695	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg19_v1_chr12_+_49761161_49761628	0.798571	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg19_v1_chr1_+_100818007_100818027	0.798184	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr20_+_9458460_9458567	0.798057	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr5_+_152870083_152870448	0.797094	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg19_v1_chr5_+_161275185_161275229	0.795393	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr20_+_17680592_17680604	0.794179	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg19_v1_chr5_-_22853435_22853458	0.794127	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr6_-_71012750_71012850	0.79202	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg19_v1_chr4_+_189060597_189060644	0.791367	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg19_v1_chr13_+_52436116_52436273	0.790062	SOX2.p2	AK098719|CCDC70|83446|coiled-coil domain containing 70	NM_031290|CCDC70|83446|coiled-coil domain containing 70	AK225745|CCDC70|83446|coiled-coil domain containing 70	AL136887|CCDC70|83446|coiled-coil domain containing 70	BC069691|CCDC70|83446|coiled-coil domain containing 70	BC069748|CCDC70|83446|coiled-coil domain containing 70	BC069770|CCDC70|83446|coiled-coil domain containing 70	BC069806|CCDC70|83446|coiled-coil domain containing 70
hg19_v1_chr6_-_131291480_131291622	0.788828	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr11_+_109292837_109292850	0.788588	SOX2.p2	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg19_v1_chr20_-_23433478_23433481	0.7882	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg19_v1_chr3_+_85775631_85775631	0.787221	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg19_v1_chr9_+_8858130_8858137	0.786737	SOX2.p2	
hg19_v1_chr12_+_110906203_110906415	0.786673	SOX2.p2	AK296280|C12orf24|29902|chromosome 12 open reading frame 24	AK297684|C12orf24|29902|chromosome 12 open reading frame 24	NM_013300|C12orf24|29902|chromosome 12 open reading frame 24	AK225731|C12orf24|29902|chromosome 12 open reading frame 24	U79274|C12orf24|29902|chromosome 12 open reading frame 24	BC020967|C12orf24|29902|chromosome 12 open reading frame 24
hg19_v1_chr9_+_75136716_75136716	0.786007	SOX2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg19_v1_chr6_+_50786438_50786632	0.783827	SOX2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg19_v1_chr21_+_37507209_37507490	0.783232	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg19_v1_chr5_+_36606667_36606790	0.781782	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr6_+_84562984_84563134	0.780702	SOX2.p2	NM_001009994|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC130460|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC132968|RIPPLY2|134701|ripply2 homolog (zebrafish)	HQ258714|RIPPLY2|134701|ripply2 homolog (zebrafish)
hg19_v1_chr5_+_140624916_140624980	0.780522	SOX2.p2	AK312794|PCDHB15|56121|protocadherin beta 15	BC038797|PCDHB15|56121|protocadherin beta 15
hg19_v1_chrX_+_109662284_109662284	0.779921	SOX2.p2	AB037739|RGAG1|57529|retrotransposon gag domain containing 1	AY121804|RGAG1|57529|retrotransposon gag domain containing 1	NM_020769|RGAG1|57529|retrotransposon gag domain containing 1
hg19_v1_chr5_+_36606456_36606456	0.779454	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr19_-_42947050_42947199	0.778795	SOX2.p2	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17	BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17	NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17
hg19_v1_chr7_-_107443631_107443677	0.778574	SOX2.p2	L02785|SLC26A3|1811|solute carrier family 26, member 3	BC025671|SLC26A3|1811|solute carrier family 26, member 3	BX640837|SLC26A3|1811|solute carrier family 26, member 3	NM_000111|SLC26A3|1811|solute carrier family 26, member 3
hg19_v1_chrX_+_91090459_91090503	0.776882	SOX2.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr7_-_28998028_28998036	0.776653	SOX2.p2	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr11_-_64727608_64727608	0.776114	SOX2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg19_v1_chr21_-_34185943_34186052	0.77497	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg19_v1_chr1_-_43424324_43424520	0.774949	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr7_+_155250705_155250823	0.774772	SOX2.p2	BC104970|EN2|2020|engrailed homeobox 2	BC104972|EN2|2020|engrailed homeobox 2	NM_001427|EN2|2020|engrailed homeobox 2
hg19_v1_chr8_+_70405080_70405098	0.774088	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg19_v1_chr7_-_14030864_14030873	0.774018	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg19_v1_chr4_-_105416050_105416057	0.773711	SOX2.p2	AK127778|CXXC4|80319|CXXC finger protein 4
hg19_v1_chr11_+_125496123_125496336	0.773389	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chr5_-_138211054_138211064	0.771942	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr19_-_2717272_2717427	0.771418	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg19_v1_chr22_+_43808090_43808144	0.771318	SOX2.p2	AK289774|MPPED1|758|metallophosphoesterase domain containing 1
hg19_v1_chr1_+_84768333_84768333	0.770261	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg19_v1_chr12_+_101188373_101188735	0.770093	SOX2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg19_v1_chr16_-_4852856_4852941	0.765621	SOX2.p2	
hg19_v1_chr11_-_10715032_10715128	0.7655	SOX2.p2	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr12_+_75784849_75784870	0.765005	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr17_+_27370155_27370243	0.76409	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr10_+_22725990_22726008	0.764051	SOX2.p2	AK295718|LOC100289455|100289455|uncharacterized LOC100289455
hg19_v1_chr1_-_17308072_17308080	0.763836	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr12_-_45270157_45270246	0.763318	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr5_+_161274939_161274939	0.763203	SOX2.p2	NM_001127644|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr17_-_73505914_73505968	0.762837	SOX2.p2	AK300354|CASKIN2|57513|CASK interacting protein 2	NM_001142643|CASKIN2|57513|CASK interacting protein 2	AK315936|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr1_+_151739130_151739191	0.762321	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg19_v1_chr17_-_38821286_38821415	0.761105	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr9_-_115774471_115774471	0.760397	SOX2.p2	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg19_v1_chr5_-_147162264_147162347	0.759806	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr5_+_140220811_140220906	0.75877	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg19_v1_chr1_-_150587879_150587959	0.75846	SOX2.p2	
hg19_v1_chr15_-_76304762_76304784	0.757504	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg19_v1_chr18_+_44497512_44497602	0.755956	SOX2.p2	AK309134|KATNAL2|83473|katanin p60 subunit A-like 2
hg19_v1_chr22_+_50609159_50609189	0.755953	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg19_v1_chr7_-_99698278_99698385	0.755286	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr4_-_168155576_168155646	0.754373	SOX2.p2	AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v1_chr2_+_207406815_207406857	0.754318	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr12_-_62586547_62586619	0.753778	SOX2.p2	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v1_chr2_-_111230651_111230651	0.753364	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr20_+_2944918_2944935	0.753221	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr5_-_147162175_147162231	0.751846	SOX2.p2	BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr7_-_28997907_28997952	0.750742	SOX2.p2	AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats	BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr9_+_127420690_127420719	0.750036	SOX2.p2	AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)
hg19_v1_chr10_-_127371593_127371712	0.748763	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg19_v1_chr5_-_34043234_34043370	0.748557	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg19_v1_chr7_+_106505739_106505809	0.747267	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr4_-_7941092_7941684	0.747238	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg19_v1_chr21_+_33784751_33784751	0.747119	SOX2.p2	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63
hg19_v1_chr7_-_107643330_107643880	0.745018	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr8_-_80679897_80680097	0.744412	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg19_v1_chr22_+_20377668_20377668	0.742259	SOX2.p2	NM_001242313|TMEM191B|728229|transmembrane protein 191B
hg19_v1_chr5_+_31193761_31193832	0.742058	SOX2.p2	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr4_-_75719686_75719881	0.74182	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg19_v1_chr5_+_161275897_161275897	0.741576	SOX2.p2	NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chrX_+_110339374_110339428	0.740201	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr8_-_95449131_95449179	0.73897	SOX2.p2	AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg19_v1_chr4_+_54243829_54243899	0.738229	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr12_-_70083055_70083056	0.736723	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg19_v1_chr19_+_11071792_11071856	0.735763	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr13_+_99058147_99058266	0.735663	SOX2.p2	
hg19_v1_chr1_+_151032683_151032861	0.735356	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr2_+_48844936_48845014	0.734979	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg19_v1_chr20_-_50384899_50384957	0.734676	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr3_+_238274_238289	0.73435	SOX2.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr19_+_1269244_1269366	0.734103	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein
hg19_v1_chr14_-_105444693_105444723	0.733798	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr13_-_95131718_95131935	0.73301	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg19_v1_chr15_-_74659926_74660080	0.731585	SOX2.p2	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v1_chr21_+_19618191_19618191	0.730169	SOX2.p2	AK296009|CHODL|140578|chondrolectin	NM_001204174|CHODL|140578|chondrolectin
hg19_v1_chr1_-_152086555_152086555	0.729851	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg19_v1_chr16_-_49315682_49315786	0.729709	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg19_v1_chr8_-_102803196_102803204	0.728988	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr12_-_45269953_45270001	0.72844	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr10_+_119302709_119302777	0.727542	SOX2.p2	
hg19_v1_chr20_+_31367637_31367657	0.727374	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr5_+_15500539_15500549	0.726888	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr4_+_78078394_78078526	0.72639	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg19_v1_chr1_-_201915467_201915680	0.726328	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr11_-_102401430_102401489	0.723631	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v1_chr7_-_121944485_121944693	0.722436	SOX2.p2	AY726588|FEZF1|389549|FEZ family zinc finger 1	BC127714|FEZF1|389549|FEZ family zinc finger 1	BC127715|FEZF1|389549|FEZ family zinc finger 1	NM_001024613|FEZF1|389549|FEZ family zinc finger 1	NM_001160264|FEZF1|389549|FEZ family zinc finger 1	BC136684|FEZF1|389549|FEZ family zinc finger 1	BC144367|FEZF1|389549|FEZ family zinc finger 1	AK300742|FEZF1|389549|FEZ family zinc finger 1
hg19_v1_chr7_+_55980330_55980367	0.7223	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg19_v1_chr4_+_114214102_114214137	0.719328	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr20_-_50384861_50384895	0.717761	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr7_+_137531690_137531775	0.716992	SOX2.p2	
hg19_v1_chr10_-_64028457_64028621	0.716439	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg19_v1_chr2_+_176969233_176969249	0.716156	SOX2.p2	
hg19_v1_chr10_+_72972268_72972493	0.715933	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg19_v1_chrX_+_48114796_48114809	0.7148	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg19_v1_chr3_-_157221362_157221414	0.714322	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr1_+_87797371_87797459	0.713345	SOX2.p2	BC065818|LMO4|8543|LIM domain only 4
hg19_v1_chr12_-_118406027_118406027	0.71247	SOX2.p2	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg19_v1_chr15_-_49255640_49255640	0.70799	SOX2.p2	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4
hg19_v1_chr2_+_153191591_153191750	0.70603	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg19_v1_chr8_+_26435590_26435770	0.705525	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2	AB370194|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr19_-_22379752_22379752	0.705037	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg19_v1_chr17_-_34266359_34266559	0.704897	SOX2.p2	AY742214|LYZL6|57151|lysozyme-like 6	AY359018|LYZL6|57151|lysozyme-like 6	NM_020426|LYZL6|57151|lysozyme-like 6
hg19_v1_chr8_-_124749573_124749665	0.70399	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr11_-_62689011_62689135	0.702249	SOX2.p2	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1	NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1	AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1
hg19_v1_chr1_-_44482996_44483011	0.701994	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr5_+_15500736_15500760	0.70154	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr5_+_140560979_140560979	0.70124	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg19_v1_chr14_-_88792923_88793084	0.697627	SOX2.p2	AK315263|KCNK10|54207|potassium channel, subfamily K, member 10	EU978938|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr6_-_112575880_112575911	0.697427	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chr11_-_27681195_27681195	0.697366	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr5_+_140552201_140552416	0.696396	SOX2.p2	AK315054|PCDHB7|56129|protocadherin beta 7	AK222560|PCDHB7|56129|protocadherin beta 7	AK024641|PCDHB7|56129|protocadherin beta 7	NM_018940|PCDHB7|56129|protocadherin beta 7	AK222678|PCDHB7|56129|protocadherin beta 7	BC098574|PCDHB7|56129|protocadherin beta 7	BC130331|PCDHB7|56129|protocadherin beta 7	BC130333|PCDHB7|56129|protocadherin beta 7	AF152500|PCDHB7|56129|protocadherin beta 7	AF217750|PCDHB7|56129|protocadherin beta 7	HQ258360|PCDHB7|56129|protocadherin beta 7
hg19_v1_chr12_+_32260084_32260263	0.695577	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg19_v1_chr3_-_66024508_66024518	0.693777	SOX2.p2	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v1_chr22_-_17073440_17073699	0.69313	SOX2.p2	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2
hg19_v1_chr9_-_95166827_95166980	0.692614	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr11_-_119234859_119234906	0.692593	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr6_+_134758840_134758857	0.69242	SOX2.p2	AK055166|LOC154092|154092|uncharacterized LOC154092
hg19_v1_chr1_-_201915715_201915717	0.691742	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr7_-_111846192_111846339	0.691422	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr20_-_58507172_58507208	0.691257	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg19_v1_chr14_+_37667148_37667292	0.690644	SOX2.p2	BC035870|MIPOL1|145282|mirror-image polydactyly 1	BX537396|MIPOL1|145282|mirror-image polydactyly 1	AK291850|MIPOL1|145282|mirror-image polydactyly 1	BC036523|MIPOL1|145282|mirror-image polydactyly 1	BC036124|MIPOL1|145282|mirror-image polydactyly 1	BX647795|MIPOL1|145282|mirror-image polydactyly 1	AY059470|MIPOL1|145282|mirror-image polydactyly 1
hg19_v1_chr8_-_7673137_7673237	0.690105	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg19_v1_chr12_+_110152186_110152189	0.689802	SOX2.p2	NM_032829|C12orf34|84915|chromosome 12 open reading frame 34	BC020193|C12orf34|84915|chromosome 12 open reading frame 34
hg19_v1_chr19_+_58095507_58095627	0.688087	SOX2.p2	AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)
hg19_v1_chr5_+_34839268_34839327	0.68758	SOX2.p2	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like	NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like
hg19_v1_chr2_+_177016112_177016314	0.687278	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr11_-_10715297_10715321	0.687189	SOX2.p2	AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr15_+_59908724_59908787	0.686916	SOX2.p2	AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr5_+_34656482_34656543	0.685117	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr12_-_10588543_10588615	0.683579	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg19_v1_chr2_+_191301020_191301120	0.683173	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr15_+_59499021_59499084	0.682945	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg19_v1_chr3_+_141105283_141105293	0.682302	SOX2.p2	
hg19_v1_chr20_-_14318200_14318312	0.677389	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg19_v1_chrX_+_80457559_80457593	0.677133	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chrX_+_80457302_80457504	0.676325	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr1_-_173020011_173020102	0.675892	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg19_v1_chr3_-_121740968_121741126	0.675429	SOX2.p2	AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1	BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1
hg19_v1_chr5_+_140501399_140501421	0.675315	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr2_+_207804277_207804323	0.675258	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg19_v1_chr9_+_40700290_40700290	0.673597	SOX2.p2	NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3
hg19_v1_chr12_-_11150473_11150473	0.671276	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg19_v1_chr1_-_190446701_190446770	0.671021	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr9_-_98268866_98268881	0.670839	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233423|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg19_v1_chr7_-_155326538_155326556	0.668992	SOX2.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg19_v1_chrX_+_37865834_37865866	0.66742	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg19_v1_chr3_+_1134619_1134707	0.665985	SOX2.p2	AK314220|CNTN6|27255|contactin 6	BC036338|CNTN6|27255|contactin 6	AB003592|CNTN6|27255|contactin 6	NM_014461|CNTN6|27255|contactin 6	BC113118|CNTN6|27255|contactin 6	AK307814|CNTN6|27255|contactin 6
hg19_v1_chr1_-_85930610_85930640	0.665186	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr3_-_169530451_169530693	0.664301	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34
hg19_v1_chrX_-_15683153_15683153	0.663326	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chrX_-_130423387_130423438	0.663143	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr13_-_41706587_41707003	0.663009	SOX2.p2	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg19_v1_chr3_-_48229328_48229528	0.662492	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg19_v1_chr10_-_62149487_62149633	0.662163	SOX2.p2	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr3_+_111717585_111717829	0.661845	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chr19_+_51760963_51760963	0.661192	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg19_v1_chr12_-_16758312_16758338	0.660264	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr3_+_140770742_140770772	0.659587	SOX2.p2	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr16_-_81110803_81110871	0.65938	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg19_v1_chr5_+_161275541_161275568	0.658434	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr5_-_75008245_75008279	0.655595	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg19_v1_chr1_+_53925482_53925579	0.654886	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr9_+_82187599_82187772	0.654084	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v1_chr9_-_117265452_117265494	0.653529	SOX2.p2	AL110228|DFNB31|25861|deafness, autosomal recessive 31	NM_001083885|DFNB31|25861|deafness, autosomal recessive 31
hg19_v1_chr11_-_85425790_85425790	0.652384	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr5_+_161112657_161112657	0.652108	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg19_v1_chr9_+_125796845_125796845	0.65208	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr9_+_103204187_103204220	0.651597	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr8_-_22550708_22550861	0.649583	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg19_v1_chr4_+_109088677_109088691	0.64956	SOX2.p2	BC020624|LOC641518|641518|uncharacterized LOC641518
hg19_v1_chr7_+_102553343_102553521	0.649383	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg19_v1_chr12_-_91573264_91573358	0.648861	SOX2.p2	AK291309|DCN|1634|decorin	BX571756|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg19_v1_chr19_-_56988698_56988769	0.648802	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr10_+_60936346_60936431	0.648368	SOX2.p2	AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr9_-_14868974_14869024	0.648099	SOX2.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg19_v1_chr2_+_62934030_62934031	0.648097	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg19_v1_chrX_+_21958714_21958938	0.648075	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chr5_+_15500768_15500785	0.647033	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr5_+_140588267_140588291	0.645166	SOX2.p2	AK293336|PCDHB12|56124|protocadherin beta 12	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg19_v1_chr1_-_178840079_178840214	0.645016	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg19_v1_chr2_+_196521851_196521965	0.64339	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr12_+_75728418_75728507	0.643036	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg19_v1_chr8_-_7332603_7332603	0.642479	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg19_v1_chr1_+_172502012_172502273	0.642341	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr10_+_121578768_121578785	0.641339	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr19_-_50266514_50266542	0.641154	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg19_v1_chr21_+_18885104_18885223	0.638892	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr19_-_49401937_49401995	0.638428	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg19_v1_chr1_+_19971865_19971865	0.637448	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr19_-_40724272_40724305	0.636786	SOX2.p2	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B	AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B	BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B	NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B
hg19_v1_chr21_-_40720842_40720937	0.636217	SOX2.p2	BT007337|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr19_-_5340700_5340889	0.636107	SOX2.p2	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S
hg19_v1_chr1_+_182569427_182569465	0.635186	SOX2.p2	
hg19_v1_chr17_-_67240955_67240986	0.634546	SOX2.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg19_v1_chr6_+_13924676_13924676	0.633984	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg19_v1_chr12_-_99548867_99548867	0.633785	SOX2.p2	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr20_+_30467596_30467631	0.633166	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg19_v1_chr2_-_200325200_200325283	0.633039	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr5_-_150284293_150284373	0.631054	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg19_v1_chr4_+_55523906_55524362	0.630474	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v1_chr15_+_25200069_25200191	0.628271	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg19_v1_chr5_+_121647773_121647943	0.62781	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr17_+_73720775_73720783	0.627726	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr2_+_71205574_71205574	0.627657	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53
hg19_v1_chrX_+_52780279_52780345	0.626546	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg19_v1_chr9_+_96846710_96846793	0.625897	SOX2.p2	NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg19_v1_chr4_-_57522059_57522256	0.625211	SOX2.p2	AB019573|HOPX|84525|HOP homeobox	AM393649|HOPX|84525|HOP homeobox	DQ892193|HOPX|84525|HOP homeobox	EU176669|HOPX|84525|HOP homeobox
hg19_v1_chr1_+_19972259_19972259	0.624581	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr17_-_34270670_34270702	0.622977	SOX2.p2	BC054481|LYZL6|57151|lysozyme-like 6	NM_001199951|LYZL6|57151|lysozyme-like 6
hg19_v1_chr12_-_99548471_99548644	0.6222	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr5_-_38595506_38595506	0.621368	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg19_v1_chr5_-_150326105_150326142	0.620551	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg19_v1_chr1_+_90098624_90098642	0.618418	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr9_+_22113542_22113676	0.617832	SOX2.p2	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)
hg19_v1_chr17_+_48262816_48262863	0.616806	SOX2.p2	
hg19_v1_chr10_-_108924287_108924465	0.616537	SOX2.p2	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg19_v1_chr11_-_117166247_117166385	0.616535	SOX2.p2	AB177847|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296015|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296535|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207048|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207049|BACE1|23621|beta-site APP-cleaving enzyme 1
hg19_v1_chr14_+_77292714_77292876	0.616517	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg19_v1_chr7_-_144107319_144107320	0.616481	SOX2.p2	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox
hg19_v1_chr13_-_25496913_25497026	0.616374	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg19_v1_chr8_+_144295067_144295142	0.615793	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg19_v1_chr7_+_106505696_106505731	0.615415	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr18_-_53257033_53257044	0.614211	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_61601944_61602002	0.613936	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_001243952|KIF2A|3796|kinesin heavy chain member 2A	NM_001243953|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr1_+_10490158_10490158	0.611257	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr19_-_55690717_55690757	0.608425	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg19_v1_chr4_+_30721865_30722133	0.607534	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr5_+_92920592_92920744	0.607099	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr11_+_61735217_61735452	0.606984	SOX2.p2	AK093779|LOC399900|399900|uncharacterized LOC399900	BC132894|LOC399900|399900|uncharacterized LOC399900	BC132896|LOC399900|399900|uncharacterized LOC399900
hg19_v1_chr8_-_93115453_93115457	0.605942	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr8_+_26435920_26435934	0.604958	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr10_-_105845556_105845583	0.604801	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr5_+_137514416_137514416	0.602509	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr1_+_65730423_65730436	0.601931	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chrX_+_88002225_88002255	0.601311	SOX2.p2	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1	NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1	AK098646|CPXCR1|53336|CPX chromosome region, candidate 1	AK313768|CPXCR1|53336|CPX chromosome region, candidate 1	BC027614|CPXCR1|53336|CPX chromosome region, candidate 1
hg19_v1_chr15_+_65822842_65823005	0.599444	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr11_+_120195837_120195837	0.598001	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg19_v1_chr19_+_51293671_51293671	0.597527	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg19_v1_chr3_+_172472246_172472359	0.59719	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr14_+_70918873_70918873	0.596507	SOX2.p2	NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21
hg19_v1_chr1_-_169336999_169337185	0.593936	SOX2.p2	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr13_-_46189858_46189873	0.592135	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg19_v1_chr3_-_114343791_114343798	0.592112	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr9_+_35041101_35041101	0.591895	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr20_+_44258384_44258418	0.591578	SOX2.p2	AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A	NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A	BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A
hg19_v1_chr17_-_43025027_43025098	0.591053	SOX2.p2	NM_001080443|KIF18B|146909|kinesin family member 18B
hg19_v1_chrX_+_47229981_47230066	0.590533	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg19_v1_chr12_+_119419299_119419395	0.59032	SOX2.p2	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4
hg19_v1_chr17_-_39538635_39538654	0.58939	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg19_v1_chr19_+_12780516_12780603	0.589164	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg19_v1_chr19_-_38720330_38720338	0.589136	SOX2.p2	AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1
hg19_v1_chr9_-_36400817_36400977	0.588638	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr19_+_48972574_48972764	0.588486	SOX2.p2	AB209573|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg19_v1_chr7_+_128828712_128828712	0.58812	SOX2.p2	BC009989|SMO|6608|smoothened, frizzled family receptor	NM_005631|SMO|6608|smoothened, frizzled family receptor
hg19_v1_chr19_+_9296269_9296269	0.587628	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg19_v1_chr2_-_133429069_133429151	0.585789	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr11_-_76155704_76155747	0.585503	SOX2.p2	
hg19_v1_chr9_-_114521792_114521812	0.585361	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg19_v1_chr19_-_38720312_38720320	0.582882	SOX2.p2	BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1	NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1
hg19_v1_chr6_+_72596699_72596726	0.582016	SOX2.p2	AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr1_+_23695441_23695549	0.580958	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg19_v1_chr22_+_30792929_30793101	0.580723	SOX2.p2	NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg19_v1_chr2_+_27799388_27799392	0.579723	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg19_v1_chr6_-_88854989_88855083	0.579483	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg19_v1_chr1_-_208059254_208059392	0.578814	SOX2.p2	
hg19_v1_chr5_+_159848835_159848873	0.57866	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr4_+_154125589_154125621	0.578652	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr9_+_2717525_2717525	0.577782	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg19_v1_chr16_+_15528324_15528477	0.576314	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chr17_-_41910439_41910814	0.576081	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg19_v1_chr3_+_49235860_49235860	0.576001	SOX2.p2	BC036202|CCDC36|339834|coiled-coil domain containing 36	NM_178173|CCDC36|339834|coiled-coil domain containing 36
hg19_v1_chr11_-_71823737_71823825	0.575466	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr4_-_54424366_54424390	0.575162	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr1_+_204839977_204839989	0.575099	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg19_v1_chrX_+_54947228_54947287	0.573122	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chrX_-_112066353_112066353	0.571276	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr14_-_71275732_71275887	0.570931	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg19_v1_chr22_+_38864015_38864237	0.570223	SOX2.p2	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v1_chr15_-_73661141_73661273	0.569776	SOX2.p2	AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v1_chr14_-_22005035_22005336	0.569416	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr1_+_150255228_150255258	0.568215	SOX2.p2	BC047238|C1orf51|148523|chromosome 1 open reading frame 51	NM_144697|C1orf51|148523|chromosome 1 open reading frame 51	AK098755|C1orf51|148523|chromosome 1 open reading frame 51	AK315397|C1orf51|148523|chromosome 1 open reading frame 51
hg19_v1_chrX_-_55057408_55057496	0.567432	SOX2.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr20_-_45985411_45985566	0.566672	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr14_+_71996041_71996041	0.566085	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr6_-_27440459_27440944	0.5658	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg19_v1_chr5_+_92918924_92919042	0.565667	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr1_-_240775448_240775461	0.565413	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg19_v1_chr9_-_16727887_16727908	0.562716	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg19_v1_chr7_+_55433396_55433748	0.561587	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr3_-_192445344_192445387	0.561301	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg19_v1_chr5_-_111092865_111092908	0.558233	SOX2.p2	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr5_+_140797243_140797259	0.557701	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr13_+_111855406_111855439	0.557145	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr8_+_124194873_124195093	0.556594	SOX2.p2	BC007828|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr10_-_25241504_25241561	0.556441	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg19_v1_chr10_-_62332666_62332715	0.556207	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr11_+_71791376_71791376	0.555603	SOX2.p2	NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing
hg19_v1_chr5_+_140571903_140572125	0.555554	SOX2.p2	AK056391|PCDHB10|56126|protocadherin beta 10	BC031837|PCDHB10|56126|protocadherin beta 10	NM_018930|PCDHB10|56126|protocadherin beta 10	AY358720|PCDHB10|56126|protocadherin beta 10	AF152489|PCDHB10|56126|protocadherin beta 10	AF217748|PCDHB10|56126|protocadherin beta 10
hg19_v1_chr11_-_790103_790125	0.554342	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr1_+_205236591_205236677	0.553788	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr6_-_34101272_34101532	0.551686	SOX2.p2	EU432124|GRM4|2914|glutamate receptor, metabotropic 4	HQ258665|GRM4|2914|glutamate receptor, metabotropic 4	HQ258669|GRM4|2914|glutamate receptor, metabotropic 4	U92457|GRM4|2914|glutamate receptor, metabotropic 4	BC130526|GRM4|2914|glutamate receptor, metabotropic 4	BC130528|GRM4|2914|glutamate receptor, metabotropic 4	BC144057|GRM4|2914|glutamate receptor, metabotropic 4	NM_000841|GRM4|2914|glutamate receptor, metabotropic 4	X80818|GRM4|2914|glutamate receptor, metabotropic 4
hg19_v1_chr13_-_60587298_60587342	0.550693	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg19_v1_chr16_-_72206348_72206348	0.550318	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr11_+_17757494_17757545	0.549874	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg19_v1_chr7_+_55433140_55433140	0.549487	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr7_+_129984629_129984700	0.549213	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg19_v1_chr1_+_192544856_192544961	0.549069	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1
hg19_v1_chr3_+_185303961_185304206	0.548193	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v1_chr13_-_33760215_33760215	0.546093	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr14_-_58618916_58618932	0.54449	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr11_-_5537815_5537955	0.544058	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg19_v1_chr16_-_72206023_72206063	0.543561	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr1_+_172502291_172502471	0.543474	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr9_-_37465384_37465406	0.542584	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr1_-_151688791_151688881	0.54208	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr8_+_136470108_136470294	0.54203	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr9_+_84543342_84543401	0.541642	SOX2.p2	NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4	AK125847|FAM75D4|389761|family with sequence similarity 75, member D4	AK308327|FAM75D4|389761|family with sequence similarity 75, member D4
hg19_v1_chr4_-_83350452_83350547	0.541522	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr4_-_5890142_5890237	0.540919	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr11_+_13690151_13690229	0.540516	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr5_+_159848876_159848931	0.539865	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr6_+_31683084_31683132	0.539114	SOX2.p2	AJ315535|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315536|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315537|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	BC125138|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	NM_021246|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D
hg19_v1_chr15_+_65822738_65822840	0.538934	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr11_-_5291372_5291372	0.538241	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg19_v1_chr14_+_37131116_37131134	0.537834	SOX2.p2	AK313627|PAX9|5083|paired box 9	AB248958|PAX9|5083|paired box 9
hg19_v1_chr7_-_92855780_92855786	0.536701	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr4_+_88896838_88896866	0.536514	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr12_+_498513_498560	0.535793	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr4_+_95128994_95129234	0.535775	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr1_+_185126368_185126424	0.53517	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v1_chr16_+_15737123_15737123	0.534604	SOX2.p2	BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)
hg19_v1_chrX_+_79675945_79675979	0.533552	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg19_v1_chr22_-_33402648_33402805	0.532431	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	HQ258468|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg19_v1_chr17_-_3182267_3182267	0.532329	SOX2.p2	BC095517|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2	NM_002551|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2
hg19_v1_chr11_+_34654010_34654010	0.532206	SOX2.p2	AK310867|EHF|26298|ets homologous factor	NM_001206616|EHF|26298|ets homologous factor
hg19_v1_chr18_+_21719447_21719450	0.531046	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v1_chr1_+_97187174_97187394	0.530001	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg19_v1_chr22_+_19701968_19702117	0.529041	SOX2.p2	NM_002688|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg19_v1_chr14_+_52327384_52327400	0.528893	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr9_-_90749899_90749899	0.527812	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg19_v1_chr5_+_140810181_140810205	0.52762	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr5_+_137514753_137514878	0.526872	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr22_-_38840032_38840032	0.526147	SOX2.p2	NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4
hg19_v1_chr5_+_140809957_140810084	0.525126	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr11_+_7273141_7273246	0.523678	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg19_v1_chrX_+_47092264_47092361	0.523299	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr12_+_6881669_6881788	0.522734	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg19_v1_chr6_-_41040160_41040354	0.521496	SOX2.p2	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg19_v1_chr19_-_51893791_51893860	0.521455	SOX2.p2	BC085012|LOC147646|147646|uncharacterized LOC147646	BC043532|LOC147646|147646|uncharacterized LOC147646	NM_001193623|LOC147646|147646|uncharacterized LOC147646
hg19_v1_chr8_+_145086444_145086606	0.521379	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg19_v1_chrX_+_135579670_135579843	0.520615	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr17_-_62657997_62658138	0.520544	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr12_-_24715349_24715382	0.520539	SOX2.p2	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr6_-_52774460_52774495	0.520397	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg19_v1_chrX_+_103357106_103357262	0.51946	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg19_v1_chr3_+_238430_238469	0.519365	SOX2.p2	AB209329|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr1_-_156051788_156051809	0.519287	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr1_+_16085245_16085309	0.519275	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr20_-_30288094_30288101	0.519168	SOX2.p2	
hg19_v1_chr11_+_66790189_66790189	0.519128	SOX2.p2	AK315810|SYT12|91683|synaptotagmin XII	NM_001177880|SYT12|91683|synaptotagmin XII
hg19_v1_chr3_+_2553272_2553289	0.518797	SOX2.p2	AK095729|CNTN4|152330|contactin 4
hg19_v1_chr4_-_154710207_154710242	0.518781	SOX2.p2	BC008666|SFRP2|6423|secreted frizzled-related protein 2	AK075372|SFRP2|6423|secreted frizzled-related protein 2	AK093922|SFRP2|6423|secreted frizzled-related protein 2	AF311912|SFRP2|6423|secreted frizzled-related protein 2	NM_003013|SFRP2|6423|secreted frizzled-related protein 2
hg19_v1_chr17_+_61271354_61271368	0.517693	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v1_chr10_-_18948166_18948228	0.517516	SOX2.p2	
hg19_v1_chr14_-_76447445_76447497	0.517286	SOX2.p2	AK313564|TGFB3|7043|transforming growth factor, beta 3	X14149|TGFB3|7043|transforming growth factor, beta 3	J03241|TGFB3|7043|transforming growth factor, beta 3
hg19_v1_chr17_-_39675078_39675269	0.515917	SOX2.p2	BT007261|KRT15|3866|keratin 15	DQ892990|KRT15|3866|keratin 15	DQ896238|KRT15|3866|keratin 15	BC110649|KRT15|3866|keratin 15	BC002641|KRT15|3866|keratin 15	X07696|KRT15|3866|keratin 15	AK304059|KRT15|3866|keratin 15	NM_002275|KRT15|3866|keratin 15
hg19_v1_chr4_-_122085475_122085494	0.51487	SOX2.p2	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3	AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3	AK290409|TNIP3|79931|TNFAIP3 interacting protein 3	BC128408|TNIP3|79931|TNFAIP3 interacting protein 3	EF585496|TNIP3|79931|TNFAIP3 interacting protein 3	NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr12_+_110940004_110940147	0.513994	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg19_v1_chr16_+_4845265_4845378	0.513719	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chr14_+_20248400_20248481	0.511775	SOX2.p2	BC136987|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1	NM_001005500|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1
hg19_v1_chr2_+_159651828_159651843	0.511477	SOX2.p2	AY324399|DAPL1|92196|death associated protein-like 1	NM_001017920|DAPL1|92196|death associated protein-like 1	AF086541|DAPL1|92196|death associated protein-like 1	BC140719|DAPL1|92196|death associated protein-like 1	BC127682|DAPL1|92196|death associated protein-like 1	BC127683|DAPL1|92196|death associated protein-like 1
hg19_v1_chrX_-_138287151_138287167	0.510572	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr14_+_52327309_52327338	0.508789	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chrX_-_72299224_72299350	0.508714	SOX2.p2	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A
hg19_v1_chr11_+_4608020_4608020	0.50845	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg19_v1_chr10_+_91461333_91461418	0.508423	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg19_v1_chr9_-_37465429_37465453	0.508053	SOX2.p2	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr9_-_97356007_97356074	0.507766	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg19_v1_chr6_+_14117486_14117486	0.507759	SOX2.p2	NM_001251901|CD83|9308|CD83 molecule
hg19_v1_chr2_-_107503056_107503069	0.506309	SOX2.p2	
hg19_v1_chr1_-_202612580_202612580	0.505225	SOX2.p2	AK094430|SYT2|127833|synaptotagmin II	NM_001136504|SYT2|127833|synaptotagmin II
hg19_v1_chrX_-_100129127_100129350	0.504372	SOX2.p2	AJ438989|NOX1|27035|NADPH oxidase 1	DQ424904|NOX1|27035|NADPH oxidase 1	BC075014|NOX1|27035|NADPH oxidase 1	BC075015|NOX1|27035|NADPH oxidase 1	AF166326|NOX1|27035|NADPH oxidase 1	AF166327|NOX1|27035|NADPH oxidase 1	AF166328|NOX1|27035|NADPH oxidase 1	AK313678|NOX1|27035|NADPH oxidase 1	AK292201|NOX1|27035|NADPH oxidase 1	AF127763|NOX1|27035|NADPH oxidase 1	NM_007052|NOX1|27035|NADPH oxidase 1	NM_013955|NOX1|27035|NADPH oxidase 1
hg19_v1_chr1_+_26517051_26517118	0.504038	SOX2.p2	BC144663|CATSPER4|378807|cation channel, sperm associated 4	BC128138|CATSPER4|378807|cation channel, sperm associated 4	BC128139|CATSPER4|378807|cation channel, sperm associated 4	NM_198137|CATSPER4|378807|cation channel, sperm associated 4
hg19_v1_chr17_-_39780762_39780881	0.503816	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg19_v1_chr4_+_113152838_113153331	0.503534	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg19_v1_chr11_+_7041699_7041699	0.503241	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg19_v1_chr18_-_45663667_45663731	0.502752	SOX2.p2	AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C	NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C	EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C
hg19_v1_chr8_+_38244647_38244648	0.502569	SOX2.p2	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2	NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2
hg19_v1_chr3_+_35721115_35721278	0.501907	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr6_-_136610894_136610927	0.501496	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr1_-_26232890_26232992	0.500662	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr2_-_56412904_56412914	0.50044	SOX2.p2	AK311113|LOC100129434|100129434|uncharacterized LOC100129434
hg19_v1_chr12_+_53491417_53491438	0.500252	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr19_-_9325546_9325546	0.499287	SOX2.p2	BC137147|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4	BC137162|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4	NM_001005191|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4
hg19_v1_chr5_-_176900653_176900693	0.499083	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg19_v1_chr14_-_27066959_27067018	0.498266	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr14_+_54976545_54976677	0.497807	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg19_v1_chr19_-_7698569_7698633	0.497707	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg19_v1_chr4_+_185939994_185940082	0.497701	SOX2.p2	BC140795|HELT|391723|helt bHLH transcription factor	BC144567|HELT|391723|helt bHLH transcription factor	BC144569|HELT|391723|helt bHLH transcription factor	NM_001029887|HELT|391723|helt bHLH transcription factor
hg19_v1_chr2_-_208031570_208031680	0.49679	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg19_v1_chrX_+_128674181_128674416	0.495874	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr10_+_35415768_35415957	0.495756	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg19_v1_chr11_-_8190535_8190592	0.494896	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg19_v1_chr1_+_43000559_43000559	0.494451	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg19_v1_chr12_+_53491448_53491506	0.493597	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr15_+_48498497_48498498	0.492517	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg19_v1_chrX_+_148769902_148769902	0.492446	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg19_v1_chr4_+_83351956_83351982	0.491427	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr19_-_51531283_51531289	0.490802	SOX2.p2	AB013730|KLK11|11012|kallikrein-related peptidase 11	BC022068|KLK11|11012|kallikrein-related peptidase 11	NM_001167605|KLK11|11012|kallikrein-related peptidase 11	NM_006853|KLK11|11012|kallikrein-related peptidase 11
hg19_v1_chr6_+_134274247_134274443	0.488945	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr11_-_113577023_113577094	0.488808	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg19_v1_chr2_-_60780404_60780641	0.488711	SOX2.p2	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg19_v1_chr1_+_205197031_205197136	0.488525	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr12_-_54779482_54779586	0.488118	SOX2.p2	AB593085|ZNF385A|25946|zinc finger protein 385A	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg19_v1_chr5_-_150683326_150683333	0.487856	SOX2.p2	AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3	NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3	NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3
hg19_v1_chr22_-_27013959_27014007	0.487769	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg19_v1_chrX_+_72223351_72223481	0.486705	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg19_v1_chr14_+_67656109_67656177	0.485653	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg19_v1_chrX_+_17653412_17653412	0.485522	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v1_chr19_-_49250023_49250167	0.485455	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg19_v1_chr2_-_133427624_133427783	0.48506	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr4_+_71226477_71226546	0.484898	SOX2.p2	AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A	NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg19_v1_chr11_-_101787252_101787252	0.484522	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg19_v1_chr17_+_47074749_47074912	0.484249	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg19_v1_chr6_+_144185572_144185572	0.484201	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg19_v1_chr5_-_33891967_33892123	0.483953	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr4_+_156680125_156680283	0.483927	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr3_-_149375584_149375887	0.483756	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr4_+_88742549_88742562	0.482747	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chrX_+_102611379_102611462	0.482113	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr13_-_24471124_24471193	0.481622	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg19_v1_chrX_+_47092362_47092568	0.481529	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr7_+_150076405_150076449	0.480723	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg19_v1_chr3_-_189840225_189840225	0.480361	SOX2.p2	NM_001134418|LEPREL1|55214|leprecan-like 1
hg19_v1_chr8_-_93075190_93075190	0.479615	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr16_-_22385596_22385995	0.479525	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg19_v1_chr19_+_48972464_48972572	0.479505	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2
hg19_v1_chr12_+_54426831_54426902	0.478432	SOX2.p2	NM_018953|HOXC5|3222|homeobox C5
hg19_v1_chr7_-_117067514_117067576	0.478343	SOX2.p2	HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg19_v1_chr2_-_80530943_80530984	0.477863	SOX2.p2	AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg19_v1_chr13_-_61989654_61989654	0.47781	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg19_v1_chr10_+_54074037_54074194	0.477783	SOX2.p2	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)
hg19_v1_chr5_-_137514299_137514368	0.47611	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg19_v1_chr15_+_34261088_34261088	0.475649	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg19_v1_chr16_-_85145995_85146113	0.475484	SOX2.p2	BC093665|FAM92B|339145|family with sequence similarity 92, member B	BC111944|FAM92B|339145|family with sequence similarity 92, member B	AK126284|FAM92B|339145|family with sequence similarity 92, member B	NM_198491|FAM92B|339145|family with sequence similarity 92, member B
hg19_v1_chr18_-_53177999_53177999	0.47509	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_36608430_36608563	0.474574	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr14_+_74815194_74815211	0.473846	SOX2.p2	BC053325|VRTN|55237|vertebrae development homolog (pig)	AK023213|VRTN|55237|vertebrae development homolog (pig)	AK001673|VRTN|55237|vertebrae development homolog (pig)
hg19_v1_chr11_+_92085261_92085261	0.473198	SOX2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr4_+_54243909_54244009	0.472343	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr6_-_15248886_15248916	0.471254	SOX2.p2	
hg19_v1_chr2_-_211018294_211018388	0.470892	SOX2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chr11_+_124789145_124789145	0.469909	SOX2.p2	AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1
hg19_v1_chr7_+_107301079_107301079	0.467905	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg19_v1_chr17_-_42908178_42908178	0.467618	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg19_v1_chr1_-_111970354_111970398	0.466436	SOX2.p2	U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa	NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa
hg19_v1_chr1_-_201476248_201476386	0.466354	SOX2.p2	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr9_-_107299093_107299136	0.466058	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg19_v1_chr8_+_66933790_66933848	0.46567	SOX2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v1_chr11_+_59224410_59224433	0.465476	SOX2.p2	BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6
hg19_v1_chr3_-_119963141_119963141	0.465091	SOX2.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg19_v1_chr19_-_42806460_42806861	0.464844	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr3_-_112359660_112359673	0.464441	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr8_-_17270800_17270859	0.463617	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	HQ258354|MTMR7|9108|myotubularin related protein 7	HQ258491|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg19_v1_chr19_+_11071583_11071709	0.463386	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr22_+_27053392_27053552	0.462509	SOX2.p2	AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)
hg19_v1_chr16_-_49315472_49315528	0.461918	SOX2.p2	BC093692|CBLN1|869|cerebellin 1 precursor	BC093718|CBLN1|869|cerebellin 1 precursor
hg19_v1_chr19_-_1567875_1568056	0.461709	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr15_-_43910959_43910997	0.460982	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg19_v1_chr1_+_223566714_223566817	0.460549	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg19_v1_chr3_+_102153858_102153876	0.458814	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg19_v1_chr4_+_83351725_83351764	0.458705	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr10_+_102759232_102759264	0.457922	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr1_+_100818052_100818155	0.457291	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr5_-_142077508_142077634	0.45595	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr10_+_102759607_102759686	0.454615	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr3_+_171561138_171561158	0.454606	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg19_v1_chr7_-_11871735_11871844	0.454534	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chr10_+_26505235_26505235	0.454011	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v1_chr3_-_160101443_160101553	0.453809	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v1_chr4_+_88896801_88896819	0.453266	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr14_-_92413738_92413810	0.452898	SOX2.p2	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg19_v1_chr22_-_45405429_45405580	0.452437	SOX2.p2	CU012999|PHF21B|112885|PHD finger protein 21B	CU013287|PHF21B|112885|PHD finger protein 21B	CR456448|PHF21B|112885|PHD finger protein 21B	BC012187|PHF21B|112885|PHD finger protein 21B	NM_138415|PHF21B|112885|PHD finger protein 21B
hg19_v1_chr2_+_75061234_75061287	0.452119	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg19_v1_chr5_-_150284503_150284544	0.451268	SOX2.p2	AK096465|ZNF300|91975|zinc finger protein 300	NM_001172831|ZNF300|91975|zinc finger protein 300	NM_001172832|ZNF300|91975|zinc finger protein 300	NM_052860|ZNF300|91975|zinc finger protein 300
hg19_v1_chr9_+_138413283_138413329	0.451237	SOX2.p2	M90424|LCN1|3933|lipocalin 1	NM_001252617|LCN1|3933|lipocalin 1	NM_001252618|LCN1|3933|lipocalin 1	NM_001252619|LCN1|3933|lipocalin 1	NM_002297|LCN1|3933|lipocalin 1	BC065721|LCN1|3933|lipocalin 1	X67647|LCN1|3933|lipocalin 1	BC074925|LCN1|3933|lipocalin 1	BC074926|LCN1|3933|lipocalin 1	X62418|LCN1|3933|lipocalin 1
hg19_v1_chr2_-_225370687_225370770	0.450305	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg19_v1_chr1_-_31345361_31345435	0.450271	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg19_v1_chr17_+_63133501_63133658	0.449119	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg19_v1_chrX_+_144329106_144329106	0.448371	SOX2.p2	DQ336118|SPANXN1|494118|SPANX family, member N1	DQ336119|SPANXN1|494118|SPANX family, member N1	DQ336120|SPANXN1|494118|SPANX family, member N1	DQ336121|SPANXN1|494118|SPANX family, member N1	NM_001009614|SPANXN1|494118|SPANX family, member N1
hg19_v1_chrX_+_100354797_100354797	0.448093	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr14_+_52327021_52327131	0.447792	SOX2.p2	NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr15_-_74495093_74495219	0.447392	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr12_-_56360457_56360495	0.446951	SOX2.p2	AK092881|PMEL|6490|premelanosome protein	AK130180|PMEL|6490|premelanosome protein	NM_006928|PMEL|6490|premelanosome protein
hg19_v1_chrX_-_100914816_100914862	0.44681	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr3_-_112359443_112359478	0.44675	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr14_-_89020888_89021498	0.446413	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg19_v1_chr5_-_150284429_150284464	0.446168	SOX2.p2	AK300528|ZNF300|91975|zinc finger protein 300
hg19_v1_chr4_-_76598289_76598344	0.443884	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr2_-_77749335_77749501	0.443186	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg19_v1_chr3_-_112359565_112359589	0.442389	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr6_+_30594607_30594779	0.442367	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg19_v1_chr1_-_201476241_201476245	0.441552	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr11_+_13690230_13690244	0.439498	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr12_+_58120029_58120108	0.438885	SOX2.p2	AK301303|LOC100130776|100130776|uncharacterized LOC100130776	BC069024|LOC100130776|100130776|uncharacterized LOC100130776	BC039697|LOC100130776|100130776|uncharacterized LOC100130776	BC019026|LOC100130776|100130776|uncharacterized LOC100130776
hg19_v1_chr11_+_8102691_8102908	0.437806	SOX2.p2	NM_177972|TUB|7275|tubby homolog (mouse)	U54644|TUB|7275|tubby homolog (mouse)
hg19_v1_chr10_+_225932_225961	0.435839	SOX2.p2	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11	X86098|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11	AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr10_+_124320180_124320272	0.435231	SOX2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg19_v1_chr4_+_83351765_83351814	0.435087	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr3_+_2933898_2933920	0.434493	SOX2.p2	NM_001206956|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4
hg19_v1_chr19_-_51530781_51530884	0.434101	SOX2.p2	AY359014|KLK11|11012|kallikrein-related peptidase 11	AB012917|KLK11|11012|kallikrein-related peptidase 11	BC015551|KLK11|11012|kallikrein-related peptidase 11	AB041036|KLK11|11012|kallikrein-related peptidase 11	NM_144947|KLK11|11012|kallikrein-related peptidase 11
hg19_v1_chr6_-_28304151_28304151	0.433691	SOX2.p2	NM_001243241|ZNF323|64288|zinc finger protein 323	NM_001243242|ZNF323|64288|zinc finger protein 323	NM_001243244|ZNF323|64288|zinc finger protein 323	NM_030899|ZNF323|64288|zinc finger protein 323
hg19_v1_chr4_+_119947816_119947855	0.433438	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg19_v1_chr19_-_18717467_18717574	0.432654	SOX2.p2	EU832355|CRLF1|9244|cytokine receptor-like factor 1	EU832440|CRLF1|9244|cytokine receptor-like factor 1	AF178684|CRLF1|9244|cytokine receptor-like factor 1
hg19_v1_chr1_+_68150858_68150962	0.430711	SOX2.p2	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg19_v1_chr11_+_61276271_61276271	0.429947	SOX2.p2	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B
hg19_v1_chr3_-_167371701_167371746	0.429677	SOX2.p2	AK097556|WDR49|151790|WD repeat domain 49
hg19_v1_chr18_+_657461_657632	0.429445	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr3_+_149689065_149689096	0.429422	SOX2.p2	BC012363|LOC646903|646903|uncharacterized LOC646903
hg19_v1_chr4_+_81118639_81118670	0.429266	SOX2.p2	NM_001099403|PRDM8|56978|PR domain containing 8	BC071584|PRDM8|56978|PR domain containing 8	AK292137|PRDM8|56978|PR domain containing 8	BC027929|PRDM8|56978|PR domain containing 8
hg19_v1_chr12_-_50790391_50790404	0.428908	SOX2.p2	BC054024|FAM186A|121006|family with sequence similarity 186, member A	AL833333|FAM186A|121006|family with sequence similarity 186, member A	NM_001145475|FAM186A|121006|family with sequence similarity 186, member A
hg19_v1_chr11_+_93862143_93862159	0.42844	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr7_+_73498106_73498146	0.428092	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr16_+_21689834_21689837	0.427239	SOX2.p2	BC129993|OTOA|146183|otoancorin	NM_144672|OTOA|146183|otoancorin	BC129992|OTOA|146183|otoancorin
hg19_v1_chr3_-_12586962_12586962	0.42667	SOX2.p2	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480
hg19_v1_chr1_-_246580710_246580713	0.425386	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg19_v1_chr19_-_14910947_14911022	0.424757	SOX2.p2	NM_198944|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1	HQ258391|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1	BC117212|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1
hg19_v1_chr1_-_242162364_242162384	0.424652	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg19_v1_chr8_-_67090690_67090845	0.424449	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr5_-_150284390_150284406	0.422984	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg19_v1_chr1_-_120354058_120354202	0.422034	SOX2.p2	AY007243|REG4|83998|regenerating islet-derived family, member 4	AF345934|REG4|83998|regenerating islet-derived family, member 4	BC017089|REG4|83998|regenerating islet-derived family, member 4	AF254415|REG4|83998|regenerating islet-derived family, member 4	AY126670|REG4|83998|regenerating islet-derived family, member 4	AY126671|REG4|83998|regenerating islet-derived family, member 4	AY126672|REG4|83998|regenerating islet-derived family, member 4	NM_001159352|REG4|83998|regenerating islet-derived family, member 4	NM_001159353|REG4|83998|regenerating islet-derived family, member 4	NM_032044|REG4|83998|regenerating islet-derived family, member 4
hg19_v1_chr8_+_26240522_26240646	0.421101	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v1_chr15_+_82944821_82944960	0.419625	SOX2.p2	BC007811|AGSK1|80154|golgin subfamily A member 2-like	BC065260|AGSK1|80154|golgin subfamily A member 2-like	AK311124|AGSK1|80154|golgin subfamily A member 2-like	AK311170|AGSK1|80154|golgin subfamily A member 2-like	AK026448|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr1_-_165414499_165414591	0.41939	SOX2.p2	AB593016|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg19_v1_chr4_-_155412867_155412947	0.419321	SOX2.p2	AK127704|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr19_-_44905754_44905783	0.418212	SOX2.p2	AL833447|ZNF285|26974|zinc finger protein 285	AK302594|ZFP112|7771|zinc finger protein 112 homolog (mouse)	NM_152354|ZNF285|26974|zinc finger protein 285
hg19_v1_chr14_-_80697396_80697396	0.417495	SOX2.p2	AK292210|DIO2|1734|deiodinase, iodothyronine, type II	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II
hg19_v1_chr9_+_139690789_139690814	0.417246	SOX2.p2	NM_001039374|KIAA1984|84960|KIAA1984	BC064582|KIAA1984|84960|KIAA1984	BC137317|KIAA1984|84960|KIAA1984	BC137318|KIAA1984|84960|KIAA1984
hg19_v1_chr1_-_167883243_167883452	0.416945	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg19_v1_chr19_-_18717577_18717629	0.416401	SOX2.p2	AF059293|CRLF1|9244|cytokine receptor-like factor 1	BC044634|CRLF1|9244|cytokine receptor-like factor 1	AY358291|CRLF1|9244|cytokine receptor-like factor 1
hg19_v1_chr4_+_30722191_30722198	0.416357	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg19_v1_chr2_+_185463437_185463548	0.4157	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr12_-_117742856_117742856	0.41569	SOX2.p2	NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg19_v1_chr13_+_100633416_100633495	0.415623	SOX2.p2	
hg19_v1_chr19_-_42806928_42806954	0.41529	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr6_-_50016363_50016363	0.415242	SOX2.p2	DQ012016|DEFB112|245915|defensin, beta 112	NM_001037498|DEFB112|245915|defensin, beta 112
hg19_v1_chr17_+_42299282_42299409	0.415225	SOX2.p2	
hg19_v1_chr5_+_61602065_61602100	0.415053	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr19_-_57968106_57968106	0.414187	SOX2.p2	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1
hg19_v1_chr12_-_52715140_52715181	0.413875	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg19_v1_chrX_+_44703248_44703378	0.413548	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg19_v1_chr1_-_228604305_228604457	0.413135	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr9_+_84558414_84558473	0.412928	SOX2.p2	NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3	AK308327|FAM75D4|389761|family with sequence similarity 75, member D4
hg19_v1_chr20_-_35201677_35201706	0.412841	SOX2.p2	
hg19_v1_chr12_-_130646767_130646945	0.412709	SOX2.p2	AK056047|FLJ31485|440119|uncharacterized LOC440119
hg19_v1_chr17_+_7258454_7258496	0.412075	SOX2.p2	BC040900|TMEM95|339168|transmembrane protein 95	AY358218|TMEM95|339168|transmembrane protein 95	BC107110|TMEM95|339168|transmembrane protein 95	NM_198154|TMEM95|339168|transmembrane protein 95
hg19_v1_chr3_-_99594915_99595067	0.411667	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr6_+_154331630_154331635	0.411445	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg19_v1_chr17_+_48348766_48348766	0.411423	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg19_v1_chr16_-_89119355_89119384	0.411406	SOX2.p2	
hg19_v1_chr15_+_93447702_93447819	0.410626	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr4_-_109087876_109087952	0.410321	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr7_+_26677489_26677489	0.409888	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg19_v1_chr11_-_124180661_124180732	0.40952	SOX2.p2	AF238489|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	NM_001002917|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136950|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136954|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1
hg19_v1_chr7_-_148581377_148581378	0.409474	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr15_-_26961911_26961911	0.409337	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v1_chr3_-_195310985_195311075	0.408064	SOX2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr2_+_16080559_16080569	0.407173	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr3_-_112359251_112359260	0.407148	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr1_-_232878442_232878472	0.405396	SOX2.p2	
hg19_v1_chr12_+_11081833_11081912	0.405147	SOX2.p2	BX641094|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_005042|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC095488|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538206|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538207|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647155|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648436|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648871|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_001110213|PRH2|5555|proline-rich protein HaeIII subfamily 2	CR749583|PRH2|5555|proline-rich protein HaeIII subfamily 2	K03202|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647156|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC141916|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC136499|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648656|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648901|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647085|PRH2|5555|proline-rich protein HaeIII subfamily 2
hg19_v1_chr4_-_53617781_53617806	0.405068	SOX2.p2	NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1
hg19_v1_chr16_+_57769667_57769781	0.404606	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr8_-_139926235_139926253	0.40331	SOX2.p2	AF406780|COL22A1|169044|collagen, type XXII, alpha 1	NM_152888|COL22A1|169044|collagen, type XXII, alpha 1
hg19_v1_chr9_+_123837235_123837289	0.403289	SOX2.p2	AK307387|CNTRL|11064|centriolin	BC089415|CNTRL|11064|centriolin
hg19_v1_chr3_-_15373807_15374076	0.403007	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg19_v1_chrX_-_137821514_137821514	0.402624	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr17_+_7311501_7311501	0.402153	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg19_v1_chr5_+_178368193_178368237	0.402002	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg19_v1_chr14_+_79745653_79745755	0.400537	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg19_v1_chr13_-_48877796_48877822	0.4004	SOX2.p2	
hg19_v1_chr4_+_17516787_17516787	0.399908	SOX2.p2	BC127863|CLRN2|645104|clarin 2	NM_001079827|CLRN2|645104|clarin 2
hg19_v1_chr3_+_156392204_156392204	0.399361	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr9_+_123884043_123884093	0.399206	SOX2.p2	AK090600|CNTRL|11064|centriolin	BC002932|CNTRL|11064|centriolin
hg19_v1_chrX_-_142722869_142723018	0.399014	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg19_v1_chr4_-_54424402_54424435	0.398893	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr22_+_21821458_21821458	0.398652	SOX2.p2	NM_001207052|TMEM191C|645426|transmembrane protein 191C
hg19_v1_chr18_-_25757351_25757444	0.398629	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr8_-_18541441_18541624	0.398571	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr11_+_27015627_27015658	0.398377	SOX2.p2	NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg19_v1_chr20_-_31239558_31239782	0.397189	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg19_v1_chr15_+_33603162_33603176	0.396941	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr16_-_20364029_20364036	0.396645	SOX2.p2	AK127643|UMOD|7369|uromodulin	AK055722|UMOD|7369|uromodulin	AK091961|UMOD|7369|uromodulin	AK096043|UMOD|7369|uromodulin	M15881|UMOD|7369|uromodulin	BC035975|UMOD|7369|uromodulin	AK127648|UMOD|7369|uromodulin	NM_001008389|UMOD|7369|uromodulin	NM_003361|UMOD|7369|uromodulin
hg19_v1_chr6_+_56955015_56955050	0.396513	SOX2.p2	EU832452|ZNF451|26036|zinc finger protein 451	EU832534|ZNF451|26036|zinc finger protein 451
hg19_v1_chr7_-_28997661_28997734	0.396408	SOX2.p2	
hg19_v1_chrX_-_130423034_130423034	0.396188	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr2_-_55277672_55277693	0.396179	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg19_v1_chr20_-_43977023_43977087	0.396084	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg19_v1_chr3_-_38992051_38992051	0.395759	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v1_chr12_+_54378929_54379043	0.395593	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg19_v1_chr16_+_57769626_57769665	0.393947	SOX2.p2	NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr18_+_56530677_56531034	0.39383	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr18_-_24128499_24128522	0.393793	SOX2.p2	NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1
hg19_v1_chrX_+_22050920_22051130	0.392645	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg19_v1_chr17_-_1083008_1083130	0.39176	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg19_v1_chr6_-_94129059_94129307	0.390792	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg19_v1_chr1_+_43855549_43855583	0.389383	SOX2.p2	BC017576|SZT2|23334|seizure threshold 2 homolog (mouse)	NM_015284|SZT2|23334|seizure threshold 2 homolog (mouse)
hg19_v1_chr2_-_159312955_159313264	0.389347	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg19_v1_chr5_-_146833150_146833380	0.389092	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr17_-_39093671_39093835	0.388202	SOX2.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr20_+_30326903_30327171	0.387211	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg19_v1_chr7_+_143140545_143140545	0.387184	SOX2.p2	BC100938|TAS2R60|338398|taste receptor, type 2, member 60	BC100939|TAS2R60|338398|taste receptor, type 2, member 60	BC100940|TAS2R60|338398|taste receptor, type 2, member 60	BC100941|TAS2R60|338398|taste receptor, type 2, member 60	NM_177437|TAS2R60|338398|taste receptor, type 2, member 60
hg19_v1_chr5_-_35118223_35118223	0.386256	SOX2.p2	NM_001204314|PRLR|5618|prolactin receptor	NM_001204315|PRLR|5618|prolactin receptor	NM_001204316|PRLR|5618|prolactin receptor	NM_001204317|PRLR|5618|prolactin receptor	NM_001204318|PRLR|5618|prolactin receptor
hg19_v1_chr1_-_168105902_168105938	0.386159	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr11_+_27015668_27015673	0.386142	SOX2.p2	
hg19_v1_chr1_-_16161279_16161390	0.385464	SOX2.p2	
hg19_v1_chr2_-_25194484_25194607	0.385232	SOX2.p2	AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v1_chr1_-_243418340_243418372	0.383415	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr1_+_215178884_215178884	0.382313	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr11_+_36397534_36397587	0.382015	SOX2.p2	NM_001160168|PRR5L|79899|proline rich 5 like	NM_024841|PRR5L|79899|proline rich 5 like	BX640959|PRR5L|79899|proline rich 5 like	AK024275|PRR5L|79899|proline rich 5 like
hg19_v1_chr5_+_125759076_125759298	0.381615	SOX2.p2	AK024966|GRAMD3|65983|GRAM domain containing 3	AK225829|GRAMD3|65983|GRAM domain containing 3	BC008590|GRAMD3|65983|GRAM domain containing 3	AK294656|GRAMD3|65983|GRAM domain containing 3	AK293307|GRAMD3|65983|GRAM domain containing 3	AK296267|GRAMD3|65983|GRAM domain containing 3	AY116970|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr6_-_131321868_131321906	0.380441	SOX2.p2	CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr6_-_29455678_29455733	0.379789	SOX2.p2	BC069127|MAS1L|116511|MAS1 oncogene-like	BC069345|MAS1L|116511|MAS1 oncogene-like	BC101176|MAS1L|116511|MAS1 oncogene-like	BC101177|MAS1L|116511|MAS1 oncogene-like	NM_052967|MAS1L|116511|MAS1 oncogene-like	BC095511|MAS1L|116511|MAS1 oncogene-like
hg19_v1_chr2_+_203500211_203500263	0.379703	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr3_+_10857867_10857947	0.379269	SOX2.p2	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
hg19_v1_chr18_-_29993195_29993196	0.378793	SOX2.p2	
hg19_v1_chr4_-_76649557_76649794	0.378739	SOX2.p2	
hg19_v1_chr5_+_140810126_140810168	0.378618	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr6_+_47749774_47749802	0.378039	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5	HQ258199|OPN5|221391|opsin 5
hg19_v1_chr22_+_29999649_30000080	0.377734	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg19_v1_chr4_+_88896899_88896928	0.377601	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr4_-_83350548_83350618	0.37757	SOX2.p2	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr1_+_86046434_86046668	0.376748	SOX2.p2	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg19_v1_chr12_+_4829751_4829785	0.375754	SOX2.p2	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg19_v1_chr19_+_44455379_44455396	0.375675	SOX2.p2	AK314207|ZNF221|7638|zinc finger protein 221	AF187987|ZNF221|7638|zinc finger protein 221	NM_013359|ZNF221|7638|zinc finger protein 221
hg19_v1_chr6_+_87865261_87865318	0.375236	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg19_v1_chr19_-_56249739_56249767	0.375178	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg19_v1_chr3_-_11685395_11685398	0.373219	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chrX_+_152954965_152954965	0.373131	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg19_v1_chrX_-_13338517_13338517	0.372652	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg19_v1_chr16_-_77468930_77469010	0.372439	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg19_v1_chr2_+_44502596_44502674	0.372316	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg19_v1_chr5_+_180650709_180650742	0.371828	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr8_-_37797646_37797646	0.370501	SOX2.p2	BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1	NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1
hg19_v1_chr8_+_55528626_55528679	0.370397	SOX2.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg19_v1_chr13_-_61989209_61989297	0.370281	SOX2.p2	AK314607|PCDH20|64881|protocadherin 20	BC027907|PCDH20|64881|protocadherin 20	AF169693|PCDH20|64881|protocadherin 20	AK094680|PCDH20|64881|protocadherin 20
hg19_v1_chrX_-_101397370_101397444	0.370185	SOX2.p2	BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6	NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6
hg19_v1_chr9_-_140196702_140196738	0.369841	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg19_v1_chr1_+_87794548_87794570	0.368844	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg19_v1_chrX_+_85517970_85517970	0.368312	SOX2.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg19_v1_chr22_-_36236421_36236629	0.368209	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr10_+_102123420_102123604	0.366837	SOX2.p2	
hg19_v1_chrX_-_114468604_114468634	0.365596	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg19_v1_chr5_+_180650233_180650264	0.365203	SOX2.p2	NM_033549|TRIM41|90933|tripartite motif containing 41	NM_201627|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr19_-_17571724_17571762	0.364368	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg19_v1_chr7_-_41742666_41742705	0.364349	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg19_v1_chr3_+_133494275_133494277	0.364146	SOX2.p2	U88581|TF|7018|transferrin
hg19_v1_chr12_+_110562139_110562303	0.363158	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg19_v1_chr3_+_156008775_156008845	0.362583	SOX2.p2	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v1_chr17_-_56160564_56160670	0.362244	SOX2.p2	
hg19_v1_chrX_-_74743299_74743336	0.361451	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr1_-_23696267_23696358	0.360726	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr6_-_56716412_56716493	0.360302	SOX2.p2	AK294830|DST|667|dystonin
hg19_v1_chr11_+_125753508_125753508	0.360231	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg19_v1_chr11_+_114549199_114549297	0.360064	SOX2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg19_v1_chr5_-_16742336_16742338	0.359512	SOX2.p2	AK316138|MYO10|4651|myosin X
hg19_v1_chr6_+_126240369_126240477	0.359448	SOX2.p2	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg19_v1_chr7_-_50132789_50132859	0.357432	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg19_v1_chr14_-_55650348_55650465	0.35725	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg19_v1_chr8_+_87111132_87111157	0.357047	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v1_chr20_+_42543417_42543557	0.356624	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg19_v1_chr22_-_26875376_26875550	0.356521	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg19_v1_chrX_+_55246790_55246845	0.356135	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg19_v1_chr1_+_50569581_50569581	0.354968	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr5_+_140787769_140787769	0.354916	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg19_v1_chr11_-_128712340_128712416	0.354687	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v1_chr7_-_137531585_137531608	0.354292	SOX2.p2	NM_004717|DGKI|9162|diacylglycerol kinase, iota
hg19_v1_chr1_-_622033_622052	0.35356	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg19_v1_chr2_+_66662516_66662531	0.353325	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg19_v1_chr9_-_86536283_86536495	0.352351	SOX2.p2	AK297689|KIF27|55582|kinesin family member 27	BC140788|KIF27|55582|kinesin family member 27	AY237536|KIF27|55582|kinesin family member 27	AY237537|KIF27|55582|kinesin family member 27	AY237538|KIF27|55582|kinesin family member 27	NM_017576|KIF27|55582|kinesin family member 27
hg19_v1_chr12_-_28122884_28123047	0.35061	SOX2.p2	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	M26960|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr8_+_1952875_1952941	0.349918	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg19_v1_chr2_-_27603249_27603396	0.349708	SOX2.p2	AK096933|ZNF513|130557|zinc finger protein 513	AB075875|ZNF513|130557|zinc finger protein 513	NM_001201459|ZNF513|130557|zinc finger protein 513	EU446569|ZNF513|130557|zinc finger protein 513
hg19_v1_chr4_-_77328457_77328457	0.349633	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg19_v1_chr6_+_80714321_80714383	0.348889	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	AX775733|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg19_v1_chr10_-_79628870_79628948	0.347516	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg19_v1_chr18_+_56531281_56531417	0.347047	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg19_v1_chr11_-_71781091_71781137	0.34689	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr12_-_99288502_99288673	0.346861	SOX2.p2	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr17_+_43971655_43971747	0.346739	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr12_-_106532447_106532918	0.346312	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr2_+_110656008_110656008	0.345972	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr19_-_47922339_47922382	0.34594	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg19_v1_chr11_-_129062092_129062092	0.345196	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr1_+_86889768_86889930	0.34507	SOX2.p2	NM_006536|CLCA2|9635|chloride channel accessory 2	AF043977|CLCA2|9635|chloride channel accessory 2	AK290348|CLCA2|9635|chloride channel accessory 2	AK307937|CLCA2|9635|chloride channel accessory 2	BC041096|CLCA2|9635|chloride channel accessory 2	AB026833|CLCA2|9635|chloride channel accessory 2	AF127980|CLCA2|9635|chloride channel accessory 2
hg19_v1_chr6_-_123957941_123958237	0.345007	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr3_-_46786244_46786244	0.344824	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg19_v1_chr19_-_36247917_36247945	0.344725	SOX2.p2	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg19_v1_chr4_-_113558021_113558072	0.344611	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr11_+_46299585_46299662	0.344393	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg19_v1_chr19_-_18717631_18717661	0.344168	SOX2.p2	AF073515|CRLF1|9244|cytokine receptor-like factor 1	NM_004750|CRLF1|9244|cytokine receptor-like factor 1
hg19_v1_chr2_+_3705785_3705809	0.343822	SOX2.p2	AK302299|ALLC|55821|allantoicase	NM_018436|ALLC|55821|allantoicase	BC029652|ALLC|55821|allantoicase
hg19_v1_chr1_-_201475966_201475966	0.342672	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr6_-_47253962_47254003	0.3425	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr20_-_5100443_5100668	0.34206	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr7_+_73498149_73498162	0.34198	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr5_+_156820161_156820216	0.341667	SOX2.p2	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr10_-_17171789_17171878	0.341487	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr8_-_102803178_102803188	0.341102	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chr17_-_27045172_27045285	0.340507	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg19_v1_chr5_+_60933635_60933635	0.340382	SOX2.p2	AK094862|C5orf64|285668|chromosome 5 open reading frame 64	NM_173667|C5orf64|285668|chromosome 5 open reading frame 64
hg19_v1_chr5_+_140777603_140777694	0.33907	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg19_v1_chr18_-_29340698_29340842	0.338608	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg19_v1_chr10_+_114043413_114043492	0.338262	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	HQ258194|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg19_v1_chr3_+_38347426_38347517	0.337502	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14	HQ258465|SLC22A14|9389|solute carrier family 22, member 14
hg19_v1_chr7_-_82792127_82792345	0.336552	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg19_v1_chr8_-_38205652_38205732	0.336522	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v1_chr13_-_52733995_52733995	0.335203	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr14_+_42076763_42076772	0.335187	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg19_v1_chr15_+_69606741_69606741	0.334907	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chrX_-_73834460_73834469	0.334528	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr11_+_124120422_124120422	0.334045	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg19_v1_chr3_+_186915273_186915411	0.332995	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg19_v1_chr11_-_7041465_7041585	0.332908	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg19_v1_chr1_-_21501229_21501250	0.332794	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr3_-_99833348_99833356	0.332147	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr1_-_6479880_6479980	0.33119	SOX2.p2	BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)	AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)	NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)
hg19_v1_chr7_+_120965420_120965420	0.330478	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg19_v1_chr2_-_55277592_55277614	0.330283	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg19_v1_chr13_+_37393306_37393493	0.330104	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg19_v1_chr5_+_95066628_95067109	0.329525	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr3_-_109035239_109035363	0.328687	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg19_v1_chr7_-_14029286_14029323	0.327522	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg19_v1_chr3_-_146323025_146323109	0.327318	SOX2.p2	BC157886|PLSCR5|389158|phospholipid scramblase family, member 5	BC171917|PLSCR5|389158|phospholipid scramblase family, member 5
hg19_v1_chr1_-_198510074_198510074	0.327264	SOX2.p2	NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3	NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg19_v1_chr3_+_185080835_185081029	0.327145	SOX2.p2	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg19_v1_chr6_+_28249313_28249487	0.326838	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg19_v1_chrX_+_53449804_53449889	0.326413	SOX2.p2	AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1	AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1	AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1	AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1	BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1
hg19_v1_chr10_-_21814610_21814610	0.326056	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg19_v1_chr4_+_15341559_15341611	0.326035	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr1_+_150898814_150898924	0.326	SOX2.p2	NM_001145415|SETDB1|9869|SET domain, bifurcated 1	NM_001243491|SETDB1|9869|SET domain, bifurcated 1	NM_012432|SETDB1|9869|SET domain, bifurcated 1	AK302461|SETDB1|9869|SET domain, bifurcated 1	AK308335|SETDB1|9869|SET domain, bifurcated 1	BC028671|SETDB1|9869|SET domain, bifurcated 1	D31891|SETDB1|9869|SET domain, bifurcated 1	BC009362|SETDB1|9869|SET domain, bifurcated 1
hg19_v1_chr11_+_5509914_5509914	0.325819	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg19_v1_chr10_+_52750930_52750951	0.325683	SOX2.p2	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chr17_-_46692300_46692300	0.325269	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg19_v1_chr16_+_89679715_89679715	0.325062	SOX2.p2	NM_001128141|DPEP1|1800|dipeptidase 1 (renal)
hg19_v1_chr1_+_178310605_178310663	0.325056	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg19_v1_chr13_+_98795710_98795727	0.324722	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr1_-_2564428_2564502	0.323847	SOX2.p2	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1	NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1
hg19_v1_chr9_-_21482311_21482311	0.32345	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg19_v1_chr5_+_61602236_61602304	0.323407	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr1_-_156828665_156828711	0.323147	SOX2.p2	AF064078|INSRR|3645|insulin receptor-related receptor	AK310760|INSRR|3645|insulin receptor-related receptor	NM_014215|INSRR|3645|insulin receptor-related receptor
hg19_v1_chr17_-_48265912_48265926	0.323073	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg19_v1_chr15_+_82944772_82944812	0.322968	SOX2.p2	AK309746|AGSK1|80154|golgin subfamily A member 2-like	AK310769|AGSK1|80154|golgin subfamily A member 2-like	BC072390|AGSK1|80154|golgin subfamily A member 2-like	AK291684|AGSK1|80154|golgin subfamily A member 2-like	AK309420|AGSK1|80154|golgin subfamily A member 2-like	AK309732|AGSK1|80154|golgin subfamily A member 2-like	AK307285|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr3_-_3152057_3152057	0.322448	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg19_v1_chr4_+_15683265_15683388	0.322395	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr5_-_77844975_77845071	0.322151	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr10_-_22498911_22498911	0.321789	SOX2.p2	NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1
hg19_v1_chr5_+_55033844_55033908	0.320678	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr7_-_151107117_151107125	0.320636	SOX2.p2	NM_198285|WDR86|349136|WD repeat domain 86
hg19_v1_chr10_-_11574273_11574273	0.320479	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr18_-_37380249_37380287	0.320418	SOX2.p2	AK090603|LOC647946|647946|uncharacterized LOC647946
hg19_v1_chr10_+_35416089_35416182	0.319833	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg19_v1_chr3_-_149095458_149095486	0.319571	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr19_+_58545399_58545473	0.319557	SOX2.p2	BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1	NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1	BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1
hg19_v1_chr3_+_129158949_129159071	0.319453	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr1_-_58716173_58716192	0.319073	SOX2.p2	CR933698|DAB1|1600|disabled homolog 1 (Drosophila)	AB210012|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr3_+_136676706_136676955	0.317697	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg19_v1_chr9_+_90112754_90112983	0.317506	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr2_-_70475563_70475875	0.31713	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v1_chr6_+_56954889_56954924	0.316266	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg19_v1_chr5_+_140800613_140800794	0.316151	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr2_-_38829615_38829768	0.315824	SOX2.p2	
hg19_v1_chr2_-_219906237_219906248	0.315819	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg19_v1_chr12_+_49297892_49297953	0.31573	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg19_v1_chr5_+_90676131_90676193	0.314685	SOX2.p2	BC043415|LOC100129716|100129716|uncharacterized LOC100129716
hg19_v1_chr11_+_125034604_125034649	0.314173	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg19_v1_chr12_-_7596722_7596752	0.314112	SOX2.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg19_v1_chr16_-_71917411_71917443	0.314	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821	NM_001201553|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821
hg19_v1_chr8_+_117963189_117963217	0.313613	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg19_v1_chr10_+_60937226_60937350	0.313311	SOX2.p2	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr2_-_211035913_211036187	0.313301	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chr11_-_70672644_70672714	0.31316	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg19_v1_chr12_-_51477138_51477234	0.312459	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr12_-_70093064_70093195	0.312385	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg19_v1_chr1_+_53925071_53925144	0.312294	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr14_-_105071080_105071096	0.311815	SOX2.p2	AK124477|TMEM179|388021|transmembrane protein 179	NM_207379|TMEM179|388021|transmembrane protein 179
hg19_v1_chr3_-_55514933_55514955	0.311597	SOX2.p2	BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr10_-_5446781_5446796	0.311367	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr5_+_170288863_170288999	0.310207	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	NM_022897|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg19_v1_chr8_-_101158027_101158098	0.309316	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg19_v1_chr9_-_14398981_14398981	0.309272	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chr18_+_28898051_28898263	0.309004	SOX2.p2	AF097935|DSG1|1828|desmoglein 1	NM_001942|DSG1|1828|desmoglein 1	X56654|DSG1|1828|desmoglein 1
hg19_v1_chr12_-_11339542_11339542	0.30854	SOX2.p2	BC131742|TAS2R42|353164|taste receptor, type 2, member 42	NM_181429|TAS2R42|353164|taste receptor, type 2, member 42
hg19_v1_chr4_-_83483099_83483130	0.30823	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg19_v1_chr6_+_112375277_112375558	0.308184	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg19_v1_chr18_+_657674_657748	0.308107	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr17_+_76210329_76210465	0.307889	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	HM625836|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg19_v1_chr1_+_6845381_6845601	0.307483	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg19_v1_chr1_+_248112078_248112159	0.307467	SOX2.p2	BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8	NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8
hg19_v1_chr20_+_2903852_2903911	0.307177	SOX2.p2	NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr18_-_22932109_22932217	0.306118	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr1_+_213123853_213123982	0.305928	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr14_+_52327363_52327365	0.305846	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr19_-_4902878_4902878	0.305839	SOX2.p2	NM_001080523|ARRDC5|645432|arrestin domain containing 5
hg19_v1_chr13_+_98795410_98795433	0.305765	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr8_+_7752198_7752211	0.304587	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg19_v1_chr16_-_4987056_4987152	0.304139	SOX2.p2	AF013717|PPL|5493|periplakin	BC114620|PPL|5493|periplakin	AF001691|PPL|5493|periplakin	NM_002705|PPL|5493|periplakin
hg19_v1_chr11_-_114271052_114271297	0.303415	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71
hg19_v1_chr19_-_20748540_20748630	0.30338	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg19_v1_chr17_+_64960754_64961025	0.303168	SOX2.p2	NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4
hg19_v1_chr2_+_46926049_46926098	0.302013	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr4_+_119809978_119810191	0.3019	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg19_v1_chr5_-_16738346_16738495	0.301838	SOX2.p2	AK295736|MYO10|4651|myosin X
hg19_v1_chr12_-_54541008_54541155	0.301622	SOX2.p2	
hg19_v1_chr10_-_99052358_99052390	0.301404	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr12_+_75784878_75784893	0.301217	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr19_-_50316360_50316607	0.301167	SOX2.p2	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg19_v1_chr3_+_156392369_156392435	0.300556	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr6_+_168418552_168418580	0.300339	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg19_v1_chr11_-_62475060_62475178	0.299419	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr8_-_93107442_93107489	0.298775	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr10_-_99052391_99052427	0.298462	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr10_+_18429605_18429809	0.298418	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr11_+_73019662_73019668	0.29835	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v1_chr3_+_138067678_138067758	0.298262	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr15_+_96869156_96869166	0.298229	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr6_+_56954985_56955008	0.298127	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg19_v1_chr1_+_22303417_22303542	0.298072	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg19_v1_chr16_-_89350748_89351165	0.298031	SOX2.p2	BC041585|ANKRD11|29123|ankyrin repeat domain 11
hg19_v1_chr18_+_23713815_23713882	0.297768	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg19_v1_chr7_+_89843133_89843133	0.297713	SOX2.p2	AF526382|STEAP2|261729|STEAP family member 2, metalloreductase	AY358267|STEAP2|261729|STEAP family member 2, metalloreductase	NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase
hg19_v1_chr2_-_233415206_233415265	0.297385	SOX2.p2	AK056329|TIGD1|200765|tigger transposable element derived 1	NM_145702|TIGD1|200765|tigger transposable element derived 1	BC063500|TIGD1|200765|tigger transposable element derived 1
hg19_v1_chr3_+_140770412_140770545	0.29735	SOX2.p2	BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr18_-_24722757_24723001	0.297327	SOX2.p2	AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
hg19_v1_chr1_-_23694497_23694900	0.296067	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg19_v1_chr18_-_64271215_64271408	0.295886	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chr11_-_126225445_126225481	0.295886	SOX2.p2	AK096370|FLJ39051|399972|uncharacterized LOC399972
hg19_v1_chr1_+_185126191_185126350	0.295805	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v1_chr5_-_44388666_44388865	0.295261	SOX2.p2	AF508782|FGF10|2255|fibroblast growth factor 10	AB002097|FGF10|2255|fibroblast growth factor 10	AF411527|FGF10|2255|fibroblast growth factor 10	BC069561|FGF10|2255|fibroblast growth factor 10	CR541665|FGF10|2255|fibroblast growth factor 10	CR541688|FGF10|2255|fibroblast growth factor 10	GQ351295|FGF10|2255|fibroblast growth factor 10	HQ258011|FGF10|2255|fibroblast growth factor 10	NM_004465|FGF10|2255|fibroblast growth factor 10	U67918|FGF10|2255|fibroblast growth factor 10	BC105023|FGF10|2255|fibroblast growth factor 10	BC105021|FGF10|2255|fibroblast growth factor 10
hg19_v1_chr14_+_24521099_24521253	0.295127	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chr2_-_56151273_56151297	0.29469	SOX2.p2	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg19_v1_chr1_-_84464728_84464865	0.294688	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg19_v1_chr4_-_54424345_54424355	0.29456	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr9_-_95186559_95186835	0.294245	SOX2.p2	AB000114|OMD|4958|osteomodulin	AK313055|OMD|4958|osteomodulin	AK225922|OMD|4958|osteomodulin	AY358872|OMD|4958|osteomodulin	BC046356|OMD|4958|osteomodulin	NM_005014|OMD|4958|osteomodulin
hg19_v1_chr15_-_101792125_101792145	0.294242	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chrX_-_132162297_132162299	0.294071	SOX2.p2	BC101189|USP26|83844|ubiquitin specific peptidase 26	BC101190|USP26|83844|ubiquitin specific peptidase 26	BC101191|USP26|83844|ubiquitin specific peptidase 26	BC101192|USP26|83844|ubiquitin specific peptidase 26	BC069073|USP26|83844|ubiquitin specific peptidase 26	AF285593|USP26|83844|ubiquitin specific peptidase 26	NM_031907|USP26|83844|ubiquitin specific peptidase 26
hg19_v1_chr12_-_103889745_103889748	0.293927	SOX2.p2	AK058052|C12orf42|374470|chromosome 12 open reading frame 42	BC039352|C12orf42|374470|chromosome 12 open reading frame 42	BC117392|C12orf42|374470|chromosome 12 open reading frame 42	BC117394|C12orf42|374470|chromosome 12 open reading frame 42	NM_198521|C12orf42|374470|chromosome 12 open reading frame 42	BC044617|C12orf42|374470|chromosome 12 open reading frame 42	NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42
hg19_v1_chr5_-_41510627_41510729	0.293386	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v1_chr6_+_72892371_72892454	0.293101	SOX2.p2	AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr19_+_4402658_4402775	0.292687	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chr6_-_47254143_47254220	0.292436	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr16_-_89349696_89350452	0.292301	SOX2.p2	AF130076|ANKRD11|29123|ankyrin repeat domain 11	BC058001|ANKRD11|29123|ankyrin repeat domain 11	AK057803|ANKRD11|29123|ankyrin repeat domain 11
hg19_v1_chr10_+_71812536_71812658	0.292213	SOX2.p2	BC016172|H2AFY2|55506|H2A histone family, member Y2	AK022776|H2AFY2|55506|H2A histone family, member Y2	AK131057|H2AFY2|55506|H2A histone family, member Y2	AF151534|H2AFY2|55506|H2A histone family, member Y2	AF336304|H2AFY2|55506|H2A histone family, member Y2	AK022475|H2AFY2|55506|H2A histone family, member Y2
hg19_v1_chr19_+_21106058_21106115	0.292181	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85
hg19_v1_chr19_-_58067724_58067724	0.292098	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg19_v1_chr7_+_96635289_96635289	0.291386	SOX2.p2	NM_005222|DLX6|1750|distal-less homeobox 6
hg19_v1_chr5_-_9630462_9630462	0.290821	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg19_v1_chrX_+_30261847_30261847	0.290795	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr9_-_21305311_21305311	0.29045	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr17_-_9940004_9940063	0.290363	SOX2.p2	AK057761|GAS7|8522|growth arrest-specific 7	BC006454|GAS7|8522|growth arrest-specific 7	NM_201432|GAS7|8522|growth arrest-specific 7
hg19_v1_chr15_-_99789585_99789827	0.290292	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr12_-_109915093_109915122	0.29003	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr6_+_12716887_12716999	0.289876	SOX2.p2	AK295263|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr22_-_36903086_36903149	0.289408	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg19_v1_chr6_+_73076431_73076484	0.288868	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr14_-_92414004_92414045	0.288757	SOX2.p2	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg19_v1_chr19_-_17137449_17137632	0.288539	SOX2.p2	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg19_v1_chr7_-_73256838_73256886	0.288389	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg19_v1_chr15_-_65398578_65398696	0.287169	SOX2.p2	BC127916|UBAP1L|390595|ubiquitin associated protein 1-like	NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like
hg19_v1_chr6_+_139094656_139094925	0.286851	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr1_+_213124008_213124038	0.286703	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg19_v1_chr18_+_20715726_20715726	0.286379	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr21_-_27423423_27423464	0.285437	SOX2.p2	
hg19_v1_chr5_-_111093792_111093914	0.28531	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr10_+_90424145_90424215	0.285076	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg19_v1_chr15_-_34659245_34659915	0.28484	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr3_-_149095413_149095452	0.284539	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr9_-_14779530_14779530	0.284296	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg19_v1_chr12_-_49582800_49582865	0.284164	SOX2.p2	BC006468|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr14_+_24105572_24105585	0.282395	SOX2.p2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg19_v1_chr1_+_180897572_180897590	0.282222	SOX2.p2	
hg19_v1_chr17_-_62658175_62658190	0.281743	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr11_+_65266642_65266956	0.281285	SOX2.p2	
hg19_v1_chr19_+_38397880_38397945	0.280039	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr16_+_14294186_14294210	0.279853	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg19_v1_chr8_+_32504250_32504250	0.27981	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg19_v1_chrX_-_74743257_74743275	0.27917	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr15_+_63050761_63050788	0.278861	SOX2.p2	BX648144|TLN2|83660|talin 2	BX648146|TLN2|83660|talin 2
hg19_v1_chr3_+_136537860_136537979	0.27706	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr16_+_58283819_58283918	0.276805	SOX2.p2	AK299066|CCDC113|29070|coiled-coil domain containing 113	NM_001142302|CCDC113|29070|coiled-coil domain containing 113	NM_014157|CCDC113|29070|coiled-coil domain containing 113	AK314300|CCDC113|29070|coiled-coil domain containing 113	AL136785|CCDC113|29070|coiled-coil domain containing 113	BC126445|CCDC113|29070|coiled-coil domain containing 113	BC126447|CCDC113|29070|coiled-coil domain containing 113	AF161550|CCDC113|29070|coiled-coil domain containing 113	AM392831|CCDC113|29070|coiled-coil domain containing 113	CR533506|CCDC113|29070|coiled-coil domain containing 113	HQ258203|CCDC113|29070|coiled-coil domain containing 113
hg19_v1_chr6_+_29274402_29274466	0.275786	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg19_v1_chrX_+_11311532_11311553	0.275548	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg19_v1_chr4_+_36285643_36285643	0.275394	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg19_v1_chr18_+_21594751_21594762	0.274569	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg19_v1_chr1_+_40915773_40915827	0.274432	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg19_v1_chr8_-_53322200_53322441	0.274412	SOX2.p2	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v1_chr1_-_223853400_223853435	0.274156	SOX2.p2	NM_001143962|CAPN8|388743|calpain 8
hg19_v1_chr2_+_183943511_183943787	0.274113	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg19_v1_chr3_+_19988530_19988849	0.273845	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr9_+_115631814_115631917	0.273789	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg19_v1_chr5_+_86564226_86564280	0.273671	SOX2.p2	
hg19_v1_chr11_+_63753827_63753896	0.273624	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr16_-_68482373_68482590	0.273342	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v1_chr5_+_72469022_72469040	0.273007	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg19_v1_chr1_+_367639_367658	0.272452	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chr4_-_15003668_15003751	0.272019	SOX2.p2	BC039114|LOC441009|441009|uncharacterized LOC441009	BC044764|LOC441009|441009|uncharacterized LOC441009	BC047127|LOC441009|441009|uncharacterized LOC441009
hg19_v1_chr4_+_54292035_54292107	0.271913	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr20_+_44036628_44036628	0.271822	SOX2.p2	NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr2_+_70056920_70057023	0.271422	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr1_-_168105620_168105623	0.271075	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr19_+_58790306_58790446	0.271034	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg19_v1_chr16_-_52107846_52107846	0.270469	SOX2.p2	NM_001242473|LOC388276|388276|hCG2045437
hg19_v1_chr3_-_193096513_193096631	0.270044	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg19_v1_chr11_-_58611979_58611998	0.269132	SOX2.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg19_v1_chr8_-_93107881_93107881	0.268087	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr8_-_102803438_102803438	0.267739	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chr11_+_6947591_6947693	0.267501	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg19_v1_chr7_+_134464417_134464428	0.266721	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg19_v1_chrX_-_15872921_15872937	0.266616	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr1_+_90460650_90460783	0.266565	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg19_v1_chrX_+_122318095_122318386	0.266363	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg19_v1_chr2_-_163099877_163100044	0.265738	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg19_v1_chr5_+_180794268_180794287	0.26545	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chr3_-_168864325_168864399	0.265106	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr1_-_68697997_68698317	0.264926	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr3_+_138067969_138067969	0.264873	SOX2.p2	NM_001252090|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr18_+_61254533_61254662	0.264596	SOX2.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg19_v1_chr1_-_31712399_31712481	0.26456	SOX2.p2	AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chr1_-_243418482_243418662	0.264078	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr17_-_38859976_38860001	0.263944	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg19_v1_chr8_-_117023_117023	0.263666	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg19_v1_chr9_-_125289571_125289571	0.263513	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg19_v1_chr2_-_55277653_55277671	0.263374	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg19_v1_chr14_+_93389444_93389444	0.263178	SOX2.p2	NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)
hg19_v1_chr2_+_39893021_39893114	0.263146	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg19_v1_chr1_-_115259433_115259514	0.262855	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr4_-_153303663_153303666	0.262694	SOX2.p2	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7	AY008274|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr13_-_103411421_103411421	0.262252	SOX2.p2	NM_001146197|CCDC168|643677|coiled-coil domain containing 168
hg19_v1_chr16_+_77233348_77233375	0.261434	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg19_v1_chr16_-_75590107_75590225	0.261411	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg19_v1_chr14_-_81687265_81687295	0.261354	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg19_v1_chr1_-_43637969_43638240	0.261291	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg19_v1_chr5_-_142000899_142000906	0.261095	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr3_-_112359277_112359287	0.260753	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr15_-_74494851_74494866	0.260745	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr16_+_71496180_71496197	0.260086	SOX2.p2	
hg19_v1_chr20_-_55100980_55100980	0.260009	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg19_v1_chr21_-_19775958_19775972	0.259729	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr11_+_71259465_71259703	0.25962	SOX2.p2	NM_005553|KRTAP5-9|3846|keratin associated protein 5-9	X63755|KRTAP5-9|3846|keratin associated protein 5-9	BC101744|KRTAP5-9|3846|keratin associated protein 5-9	AB126078|KRTAP5-9|3846|keratin associated protein 5-9	BC069531|KRTAP5-9|3846|keratin associated protein 5-9
hg19_v1_chr10_-_64578926_64578926	0.259474	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg19_v1_chr6_-_10415438_10415499	0.259474	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr22_+_26825220_26825428	0.258773	SOX2.p2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg19_v1_chr2_-_157186681_157186700	0.25862	SOX2.p2	HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg19_v1_chr5_+_125758818_125758868	0.258362	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr2_+_203776930_203777116	0.257586	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg19_v1_chr6_+_39760772_39760865	0.257551	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg19_v1_chr7_+_23145916_23145916	0.257274	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chr9_-_4152182_4152182	0.257094	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg19_v1_chr10_+_111765725_111765838	0.256996	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg19_v1_chr12_+_65218351_65218416	0.256002	SOX2.p2	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg19_v1_chr1_+_87794576_87794787	0.25593	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr15_-_65360175_65360288	0.255878	SOX2.p2	AK314914|RASL12|51285|RAS-like, family 12	AK296261|RASL12|51285|RAS-like, family 12	AF233588|RASL12|51285|RAS-like, family 12
hg19_v1_chr15_+_99191671_99192272	0.255273	SOX2.p2	AB425196|IGF1R|3480|insulin-like growth factor 1 receptor
hg19_v1_chr4_+_26322627_26322646	0.254763	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr22_+_27068690_27068790	0.25386	SOX2.p2	AK026502|LOC100507637|100507637|uncharacterized LOC100507637
hg19_v1_chr1_-_217250230_217250311	0.253129	SOX2.p2	AB362218|ESRRG|2104|estrogen-related receptor gamma	AK131193|ESRRG|2104|estrogen-related receptor gamma	NM_001243507|ESRRG|2104|estrogen-related receptor gamma	NM_001243509|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr9_-_14313509_14313718	0.252984	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg19_v1_chr11_+_450260_450333	0.252839	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr12_+_31079837_31079891	0.252661	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg19_v1_chr14_+_69726680_69726680	0.252655	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr3_-_48601200_48601221	0.251997	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg19_v1_chr5_-_78809658_78809699	0.251312	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg19_v1_chr3_-_165555167_165555220	0.250743	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr17_+_66031814_66031866	0.250537	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr3_+_129159075_129159087	0.250331	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr11_-_62472901_62472984	0.250204	SOX2.p2	
hg19_v1_chr1_-_104238785_104238911	0.250145	SOX2.p2	BC132995|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	AK313275|AMY1A|276|amylase, alpha 1A (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr4_+_119948273_119948273	0.250104	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg19_v1_chr15_+_69307033_69307070	0.250098	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg19_v1_chr2_+_63277936_63277995	0.250053	SOX2.p2	NM_014562|OTX1|5013|orthodenticle homeobox 1	AK095680|OTX1|5013|orthodenticle homeobox 1	AK297308|OTX1|5013|orthodenticle homeobox 1	BC007621|OTX1|5013|orthodenticle homeobox 1
hg19_v1_chr5_+_140800536_140800602	0.249995	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr1_+_43855599_43855639	0.24991	SOX2.p2	BC051343|SZT2|23334|seizure threshold 2 homolog (mouse)	AK091821|SZT2|23334|seizure threshold 2 homolog (mouse)
hg19_v1_chr1_+_248524882_248524882	0.249909	SOX2.p2	NM_001004696|OR2T4|127074|olfactory receptor, family 2, subfamily T, member 4
hg19_v1_chr12_-_109915127_109915158	0.249364	SOX2.p2	AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10	AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10	NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr12_+_53442732_53442789	0.248896	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr2_+_108863650_108863650	0.24881	SOX2.p2	NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3
hg19_v1_chr1_+_171810611_171810796	0.24823	SOX2.p2	NM_001136127|DNM3|26052|dynamin 3	NM_015569|DNM3|26052|dynamin 3	AK056279|DNM3|26052|dynamin 3	AL136712|DNM3|26052|dynamin 3	AB020627|DNM3|26052|dynamin 3	AK308992|DNM3|26052|dynamin 3	AK307806|DNM3|26052|dynamin 3	BC064546|DNM3|26052|dynamin 3	AM393667|DNM3|26052|dynamin 3	AM393846|DNM3|26052|dynamin 3
hg19_v1_chr6_+_52285804_52285804	0.248041	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg19_v1_chr12_-_51477299_51477453	0.247561	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr5_-_111093251_111093465	0.247384	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_-_153067000_153067000	0.247151	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg19_v1_chr6_+_56954978_56954984	0.247056	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg19_v1_chrX_-_10645726_10645787	0.246908	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr11_-_40315663_40315663	0.246816	SOX2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg19_v1_chr1_+_84630014_84630064	0.246708	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chrX_+_41306686_41306712	0.246582	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg19_v1_chr16_-_53737713_53737802	0.246522	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg19_v1_chr12_-_105478218_105478412	0.246409	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg19_v1_chr8_+_77593522_77593534	0.245749	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg19_v1_chr17_-_50235670_50235706	0.245744	SOX2.p2	AK294652|CA10|56934|carbonic anhydrase X	AK313001|CA10|56934|carbonic anhydrase X
hg19_v1_chr3_-_121468510_121468609	0.245357	SOX2.p2	BC065301|GOLGB1|2804|golgin B1	D25542|GOLGB1|2804|golgin B1	AB371588|GOLGB1|2804|golgin B1	AB593126|GOLGB1|2804|golgin B1	AK300437|GOLGB1|2804|golgin B1	NM_004487|GOLGB1|2804|golgin B1	X75304|GOLGB1|2804|golgin B1
hg19_v1_chr1_-_243418675_243418707	0.244324	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr7_-_131241321_131241405	0.243993	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg19_v1_chr4_-_40936640_40936716	0.243991	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr7_+_50135681_50135681	0.243588	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg19_v1_chrX_-_100872926_100872990	0.243574	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr2_+_27665232_27665312	0.243106	SOX2.p2	BC101689|KRTCAP3|200634|keratinocyte associated protein 3	NM_001168364|KRTCAP3|200634|keratinocyte associated protein 3	NM_173853|KRTCAP3|200634|keratinocyte associated protein 3	BC101687|KRTCAP3|200634|keratinocyte associated protein 3	BC143574|KRTCAP3|200634|keratinocyte associated protein 3	AY157576|KRTCAP3|200634|keratinocyte associated protein 3	AY358993|KRTCAP3|200634|keratinocyte associated protein 3
hg19_v1_chr7_-_99774821_99775034	0.243025	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg19_v1_chr2_+_39892637_39892637	0.242437	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg19_v1_chr11_+_71544245_71544245	0.242435	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg19_v1_chr5_+_155753755_155753766	0.241694	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg19_v1_chr13_-_30169584_30169658	0.241582	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v1_chr6_-_152958533_152958533	0.24154	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chr18_+_657633_657663	0.241275	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chr6_+_39760138_39760141	0.241026	SOX2.p2	
hg19_v1_chr8_-_33457491_33457500	0.240319	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr6_+_71123105_71123122	0.239871	SOX2.p2	NM_001105531|FAM135A|57579|family with sequence similarity 135, member A	NM_020819|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr11_+_94300473_94300683	0.23983	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg19_v1_chr3_+_129159150_129159175	0.239788	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr8_+_102504836_102504985	0.239669	SOX2.p2	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr3_+_44771097_44771123	0.239644	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg19_v1_chr12_-_45270632_45270632	0.239588	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr10_+_101292689_101292737	0.239518	SOX2.p2	NM_145285|NKX2-3|159296|NK2 homeobox 3	BC025788|NKX2-3|159296|NK2 homeobox 3	AK313485|NKX2-3|159296|NK2 homeobox 3	AK300856|NKX2-3|159296|NK2 homeobox 3
hg19_v1_chr15_+_38544119_38544671	0.238361	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg19_v1_chr3_+_48413708_48413764	0.238204	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg19_v1_chrX_-_65859107_65859139	0.237551	SOX2.p2	AK314881|EDA2R|60401|ectodysplasin A2 receptor	NM_001199687|EDA2R|60401|ectodysplasin A2 receptor
hg19_v1_chr15_-_56035176_56035277	0.237256	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg19_v1_chr7_-_14029641_14029641	0.236563	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr2_-_233641225_233641274	0.236447	SOX2.p2	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg19_v1_chr10_-_118429469_118429480	0.236349	SOX2.p2	AK097587|C10orf82|143379|chromosome 10 open reading frame 82	BC021737|C10orf82|143379|chromosome 10 open reading frame 82	NM_144661|C10orf82|143379|chromosome 10 open reading frame 82
hg19_v1_chr12_-_11184005_11184005	0.236274	SOX2.p2	NM_176885|TAS2R31|259290|taste receptor, type 2, member 31
hg19_v1_chr17_+_42786188_42786287	0.236205	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr11_-_61584228_61584375	0.236068	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr16_+_68573660_68573660	0.235587	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr15_-_101459410_101459538	0.235255	SOX2.p2	
hg19_v1_chr15_-_65360297_65360387	0.235214	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg19_v1_chr10_-_99052429_99052449	0.234264	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19	NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr9_-_21228132_21228313	0.233959	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg19_v1_chr2_-_240985488_240985488	0.233916	SOX2.p2	NM_173351|OR6B3|150681|olfactory receptor, family 6, subfamily B, member 3
hg19_v1_chr3_+_129159138_129159138	0.233673	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr18_+_29027731_29027757	0.233617	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr2_+_61292999_61293036	0.233136	SOX2.p2	AK131267|KIAA1841|84542|KIAA1841	NM_001129993|KIAA1841|84542|KIAA1841	BC039298|KIAA1841|84542|KIAA1841	AK309749|KIAA1841|84542|KIAA1841
hg19_v1_chr6_-_31509769_31509832	0.232879	SOX2.p2	AK127767|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK294939|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK298194|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK316469|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295854|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AB209217|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr8_-_28347733_28347826	0.232223	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16
hg19_v1_chr7_+_141618616_141618675	0.231533	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg19_v1_chr5_+_169010637_169010806	0.23152	SOX2.p2	NM_017785|CCDC99|54908|coiled-coil domain containing 99	AK304623|CCDC99|54908|coiled-coil domain containing 99	AF269167|CCDC99|54908|coiled-coil domain containing 99	AK310442|CCDC99|54908|coiled-coil domain containing 99	AK308835|CCDC99|54908|coiled-coil domain containing 99	BC012568|CCDC99|54908|coiled-coil domain containing 99	AY517557|CCDC99|54908|coiled-coil domain containing 99
hg19_v1_chr3_+_161214595_161214595	0.231319	SOX2.p2	NM_001080440|OTOL1|131149|otolin 1
hg19_v1_chr1_+_248058857_248058888	0.231227	SOX2.p2	BC146848|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831764|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831842|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	NM_001001957|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3
hg19_v1_chr4_+_175205044_175205182	0.230509	SOX2.p2	NM_001145314|CEP44|80817|centrosomal protein 44kDa	BC038667|CEP44|80817|centrosomal protein 44kDa	AB051499|CEP44|80817|centrosomal protein 44kDa	AK094961|CEP44|80817|centrosomal protein 44kDa	AK292484|CEP44|80817|centrosomal protein 44kDa
hg19_v1_chr7_+_72742154_72742430	0.230491	SOX2.p2	NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa	AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa	NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa	AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa	BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa	AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa
hg19_v1_chr6_+_56911310_56911383	0.230275	SOX2.p2	BC041125|KIAA1586|57691|KIAA1586	NM_020931|KIAA1586|57691|KIAA1586
hg19_v1_chr5_+_34687663_34687663	0.229865	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr11_-_104769396_104769396	0.229804	SOX2.p2	AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)	NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)
hg19_v1_chr9_+_133971862_133971894	0.229111	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg19_v1_chr1_+_38261079_38261159	0.228496	SOX2.p2	AK301399|MANEAL|149175|mannosidase, endo-alpha-like	AK055996|MANEAL|149175|mannosidase, endo-alpha-like	NM_152496|MANEAL|149175|mannosidase, endo-alpha-like
hg19_v1_chr1_+_109419748_109419826	0.228256	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr9_+_39355665_39355706	0.228157	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr5_-_111092918_111092954	0.228052	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_-_114695061_114695061	0.227988	SOX2.p2	AK056448|SYT6|148281|synaptotagmin VI	NM_205848|SYT6|148281|synaptotagmin VI
hg19_v1_chr12_+_26205490_26205496	0.227817	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg19_v1_chr3_-_112359547_112359558	0.227581	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr20_+_31755882_31755959	0.227505	SOX2.p2	AK291854|BPIFA2|140683|BPI fold containing family A, member 2	BC065726|BPIFA2|140683|BPI fold containing family A, member 2	NM_080574|BPIFA2|140683|BPI fold containing family A, member 2
hg19_v1_chr5_-_157079371_157079427	0.227437	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg19_v1_chr19_+_9938555_9938580	0.2271	SOX2.p2	NM_001048241|UBL5|59286|ubiquitin-like 5	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg19_v1_chr17_-_38256548_38256897	0.226976	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg19_v1_chr6_+_13925097_13925235	0.226972	SOX2.p2	NM_001165032|RNF182|221687|ring finger protein 182	NM_152737|RNF182|221687|ring finger protein 182	AK315528|RNF182|221687|ring finger protein 182	BC030666|RNF182|221687|ring finger protein 182	BC050030|RNF182|221687|ring finger protein 182
hg19_v1_chr6_+_31707724_31707866	0.226515	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6orf26|100532732|MSH5-C6orf26 readthrough (non-protein coding)	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg19_v1_chr8_-_18871163_18871410	0.226306	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr20_+_1246959_1246998	0.226191	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr18_-_53303129_53303187	0.226026	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr3_+_137717657_137717701	0.225679	SOX2.p2	AK098474|CLDN18|51208|claudin 18	NM_001002026|CLDN18|51208|claudin 18	AF349452|CLDN18|51208|claudin 18
hg19_v1_chr1_+_248223963_248223983	0.225503	SOX2.p2	BC137039|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	BC137040|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	NM_001004687|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3
hg19_v1_chr17_-_63557615_63557744	0.224901	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg19_v1_chr18_-_44497307_44497520	0.223098	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr13_+_98086681_98086724	0.223085	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg19_v1_chr5_+_68800003_68800071	0.222996	SOX2.p2	NM_001205255|OCLN|100506658|occludin	FJ786083|OCLN|100506658|occludin	FJ786084|OCLN|100506658|occludin	GQ225096|OCLN|100506658|occludin	GQ225097|OCLN|100506658|occludin	GQ225098|OCLN|100506658|occludin	GQ402517|OCLN|100506658|occludin	DQ892423|OCLN|100506658|occludin	DQ895637|OCLN|100506658|occludin	AB451306|OCLN|100506658|occludin	AB451437|OCLN|100506658|occludin
hg19_v1_chr20_+_32077904_32078039	0.222988	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v1_chrX_-_48693934_48694057	0.222006	SOX2.p2	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v1_chr15_-_35046688_35046781	0.221929	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg19_v1_chr1_+_81771844_81772011	0.221303	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr2_-_44586854_44586887	0.221261	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr20_-_4804067_4804321	0.221134	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr8_+_107460151_107460151	0.220321	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr9_-_98269480_98269480	0.219937	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg19_v1_chr10_+_91092238_91092329	0.219652	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr11_-_119066583_119066583	0.219321	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg19_v1_chr11_+_450408_450473	0.219292	SOX2.p2	DQ891743|PTDSS2|81490|phosphatidylserine synthase 2	DQ894922|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr21_-_39870303_39870427	0.219033	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg19_v1_chr17_+_48821106_48821114	0.218798	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg19_v1_chr7_-_124405680_124405913	0.218757	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v1_chr17_-_44895962_44896081	0.217648	SOX2.p2	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3	BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3	AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3	NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3
hg19_v1_chr1_+_66797775_66797932	0.216971	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr14_+_74815165_74815174	0.216843	SOX2.p2	NM_018228|VRTN|55237|vertebrae development homolog (pig)
hg19_v1_chr8_-_133687761_133687894	0.216625	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg19_v1_chr5_-_149792335_149792358	0.2156	SOX2.p2	
hg19_v1_chr7_-_8302141_8302205	0.215275	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr2_-_55276288_55276333	0.214967	SOX2.p2	AK302741|RTN4|57142|reticulon 4	AF333336|RTN4|57142|reticulon 4	NM_207521|RTN4|57142|reticulon 4	AY123248|RTN4|57142|reticulon 4
hg19_v1_chr8_-_10512616_10512665	0.214918	SOX2.p2	AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1	NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1	AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1
hg19_v1_chr6_+_56954959_56954967	0.214577	SOX2.p2	AK302577|ZNF451|26036|zinc finger protein 451
hg19_v1_chr3_-_48369830_48369830	0.212992	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg19_v1_chr22_+_29279573_29279981	0.212823	SOX2.p2	NM_001206998|ZNRF3|84133|zinc and ring finger 3	AB051436|ZNRF3|84133|zinc and ring finger 3	CR456397|ZNRF3|84133|zinc and ring finger 3
hg19_v1_chr20_-_5295014_5295058	0.212821	SOX2.p2	AB084081|PROKR2|128674|prokineticin receptor 2	AF506288|PROKR2|128674|prokineticin receptor 2	EF577398|PROKR2|128674|prokineticin receptor 2	NM_144773|PROKR2|128674|prokineticin receptor 2	BC104959|PROKR2|128674|prokineticin receptor 2	BC104961|PROKR2|128674|prokineticin receptor 2
hg19_v1_chr5_-_111754738_111755009	0.211943	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg19_v1_chr12_+_7282963_7283286	0.21158	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr9_-_116061319_116061319	0.211271	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg19_v1_chr1_-_101360337_101360403	0.210213	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr4_+_106629905_106630041	0.210017	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr3_-_179322410_179322435	0.20985	SOX2.p2	AY212270|MRPL47|57129|mitochondrial ribosomal protein L47	BC032522|MRPL47|57129|mitochondrial ribosomal protein L47	BC021575|MRPL47|57129|mitochondrial ribosomal protein L47	NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47	NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47
hg19_v1_chr3_-_87040246_87040256	0.20982	SOX2.p2	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg19_v1_chr10_-_93669184_93669257	0.20936	SOX2.p2	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3	BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3	AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3	NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3
hg19_v1_chr17_-_30669133_30669281	0.209349	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr6_-_132967141_132967165	0.209264	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg19_v1_chr5_+_76435073_76435100	0.208625	SOX2.p2	
hg19_v1_chr3_+_183415540_183415704	0.208555	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg19_v1_chr5_-_11904127_11904242	0.208056	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr19_+_13135368_13135427	0.207902	SOX2.p2	BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr1_-_102462789_102462792	0.207884	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg19_v1_chr1_-_94586678_94586704	0.207719	SOX2.p2	AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v1_chr17_-_48266141_48266161	0.207553	SOX2.p2	
hg19_v1_chr19_-_38188344_38188406	0.207022	SOX2.p2	BC005085|ZNF607|84775|zinc finger protein 607
hg19_v1_chr7_+_28448970_28449007	0.206621	SOX2.p2	BC087859|LOC401317|401317|uncharacterized LOC401317
hg19_v1_chr17_-_63557764_63557772	0.206492	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg19_v1_chr21_-_40685545_40685593	0.206304	SOX2.p2	BC064602|BRWD1|54014|bromodomain and WD repeat domain containing 1	BC142986|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr1_-_21377387_21377394	0.20605	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr11_-_77531750_77531914	0.206027	SOX2.p2	AF380176|RSF1|51773|remodeling and spacing factor 1	BC015360|RSF1|51773|remodeling and spacing factor 1	NM_016578|RSF1|51773|remodeling and spacing factor 1
hg19_v1_chr15_-_74495399_74495445	0.203823	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr4_+_155702426_155702499	0.203646	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg19_v1_chr6_+_12717036_12717051	0.20339	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr14_+_65878579_65878661	0.202998	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr13_+_113633625_113633654	0.202292	SOX2.p2	AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr6_-_33771756_33771792	0.202134	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg19_v1_chr19_-_44831907_44832079	0.201966	SOX2.p2	AL122078|ZFP112|7771|zinc finger protein 112 homolog (mouse)	AK026230|ZFP112|7771|zinc finger protein 112 homolog (mouse)
hg19_v1_chr12_-_11002051_11002074	0.201101	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_001098538|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg19_v1_chr17_+_4046941_4047078	0.201084	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr3_-_125820390_125820399	0.200982	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr4_+_91156181_91156181	0.200636	SOX2.p2	BC051694|FAM190A|401145|family with sequence similarity 190, member A	NM_207491|FAM190A|401145|family with sequence similarity 190, member A
hg19_v1_chr12_+_15475445_15475658	0.200379	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg19_v1_chr20_+_31823801_31823824	0.200368	SOX2.p2	AF417256|BPIFA1|51297|BPI fold containing family A, member 1	AF417257|BPIFA1|51297|BPI fold containing family A, member 1	BC012549|BPIFA1|51297|BPI fold containing family A, member 1	NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1	NM_016583|BPIFA1|51297|BPI fold containing family A, member 1	NM_130852|BPIFA1|51297|BPI fold containing family A, member 1	AK292778|BPIFA1|51297|BPI fold containing family A, member 1	AY359020|BPIFA1|51297|BPI fold containing family A, member 1	AB024937|BPIFA1|51297|BPI fold containing family A, member 1	AF158745|BPIFA1|51297|BPI fold containing family A, member 1	AF439448|BPIFA1|51297|BPI fold containing family A, member 1	AF172993|BPIFA1|51297|BPI fold containing family A, member 1
hg19_v1_chr1_+_185014651_185014698	0.200346	SOX2.p2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg19_v1_chr4_+_26322647_26322717	0.200058	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr12_+_56030643_56030675	0.199543	SOX2.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg19_v1_chr17_-_76921076_76921155	0.199313	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr8_-_22785228_22785420	0.198786	SOX2.p2	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4	BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4	NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4
hg19_v1_chr6_-_33168369_33168437	0.198644	SOX2.p2	M84820|RXRB|6257|retinoid X receptor, beta	AB209244|RXRB|6257|retinoid X receptor, beta	X63522|RXRB|6257|retinoid X receptor, beta	AK225842|RXRB|6257|retinoid X receptor, beta	BC001167|RXRB|6257|retinoid X receptor, beta	NM_021976|RXRB|6257|retinoid X receptor, beta	AK295759|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr14_-_76448091_76448091	0.198222	SOX2.p2	NM_003239|TGFB3|7043|transforming growth factor, beta 3
hg19_v1_chr14_-_21852161_21852178	0.198196	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr14_-_21852085_21852160	0.198112	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr5_+_95067511_95067562	0.198051	SOX2.p2	
hg19_v1_chr6_-_42419782_42419864	0.197865	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg19_v1_chr1_+_92683572_92683578	0.197525	SOX2.p2	NM_001012425|C1orf146|388649|chromosome 1 open reading frame 146	BC130499|C1orf146|388649|chromosome 1 open reading frame 146	BC171742|C1orf146|388649|chromosome 1 open reading frame 146
hg19_v1_chr6_-_31509725_31509767	0.197472	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr19_-_44124013_44124013	0.197451	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg19_v1_chr3_+_155588423_155588445	0.195998	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr17_-_3571819_3571878	0.195923	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr19_+_18794487_18794559	0.195787	SOX2.p2	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1	BC028050|CRTC1|23373|CREB regulated transcription coactivator 1	DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1	DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1	AB014516|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr11_+_118889140_118889240	0.195472	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr9_+_35538890_35538938	0.195332	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr3_+_129159089_129159136	0.195215	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr4_-_113558120_113558150	0.195102	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr14_+_96829849_96829887	0.195014	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr11_-_107729523_107729653	0.194745	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr3_-_87325611_87325736	0.194709	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg19_v1_chr20_+_42965625_42965625	0.194204	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg19_v1_chr2_+_169757749_169757841	0.194055	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	HQ258182|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg19_v1_chr7_+_16566504_16566504	0.193833	SOX2.p2	NM_001195280|LRRC72|100506049|leucine rich repeat containing 72
hg19_v1_chr8_+_82192717_82192830	0.193447	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chr1_-_101360405_101360417	0.191896	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr15_-_95870310_95870328	0.191344	SOX2.p2	BC040875|LOC400456|400456|uncharacterized LOC400456
hg19_v1_chr10_+_98064084_98064252	0.191068	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg19_v1_chr2_-_225811730_225811778	0.190793	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg19_v1_chr2_-_73964427_73964516	0.190704	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg19_v1_chr6_+_27292539_27292577	0.190617	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg19_v1_chr15_-_74494780_74494825	0.19052	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr3_-_71179715_71179732	0.189992	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg19_v1_chr3_-_157221127_157221135	0.189579	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr17_+_74075262_74075348	0.189546	SOX2.p2	AK122638|ZACN|353174|zinc activated ligand-gated ion channel	NM_180990|ZACN|353174|zinc activated ligand-gated ion channel	AF512521|ZACN|353174|zinc activated ligand-gated ion channel	BC110596|ZACN|353174|zinc activated ligand-gated ion channel	BC110597|ZACN|353174|zinc activated ligand-gated ion channel	AB223030|ZACN|353174|zinc activated ligand-gated ion channel
hg19_v1_chr2_+_11682836_11682850	0.189508	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr11_-_6191555_6191637	0.189093	SOX2.p2	NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2
hg19_v1_chrY_+_24454994_24455056	0.188371	SOX2.p2	BC047768|RBMY1A1|5940|RNA binding motif protein, Y-linked, family 1, member A1	BC026077|RBMY2FP|159162|RNA binding motif protein, Y-linked, family 2, member F pseudogene	BC030018|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	NM_152585|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	X76060|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	BC144577|RBMY1B|378948|RNA binding motif protein, Y-linked, family 1, member B	BC146853|RBMY1A1|5940|RNA binding motif protein, Y-linked, family 1, member A1
hg19_v1_chr8_+_102504661_102504669	0.188191	SOX2.p2	NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr1_+_115572414_115572414	0.188066	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg19_v1_chr4_+_15480833_15480865	0.187699	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr1_+_159409511_159409548	0.187648	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg19_v1_chr10_-_118765087_118765138	0.187374	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chrY_-_6742028_6742067	0.187039	SOX2.p2	BC074976|AMELY|266|amelogenin, Y-linked	BC074977|AMELY|266|amelogenin, Y-linked	BC069138|AMELY|266|amelogenin, Y-linked	M86933|AMELY|266|amelogenin, Y-linked	NM_001143|AMELY|266|amelogenin, Y-linked
hg19_v1_chr8_-_144241725_144241754	0.186911	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg19_v1_chr17_-_73775822_73775861	0.18687	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg19_v1_chr17_-_33521376_33521411	0.186547	SOX2.p2	AK097473|SLC35G3|146861|solute carrier family 35, member G3	BC136422|SLC35G3|146861|solute carrier family 35, member G3	BC140700|SLC35G3|146861|solute carrier family 35, member G3	NM_152462|SLC35G3|146861|solute carrier family 35, member G3
hg19_v1_chr8_-_12612968_12613041	0.185574	SOX2.p2	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1
hg19_v1_chrX_-_15872905_15872913	0.184557	SOX2.p2	
hg19_v1_chr11_-_75379651_75379698	0.184255	SOX2.p2	AK123340|MAP6|4135|microtubule-associated protein 6
hg19_v1_chr17_-_39156106_39156145	0.183187	SOX2.p2	DQ892403|KRTAP3-2|83897|keratin associated protein 3-2	DQ895615|KRTAP3-2|83897|keratin associated protein 3-2	AJ406932|KRTAP3-2|83897|keratin associated protein 3-2	NM_031959|KRTAP3-2|83897|keratin associated protein 3-2	BC034582|KRTAP3-2|83897|keratin associated protein 3-2
hg19_v1_chr17_-_73511453_73511617	0.182843	SOX2.p2	AF451976|CASKIN2|57513|CASK interacting protein 2	BC032359|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr21_+_37442298_37442413	0.182735	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr21_-_42218587_42218650	0.182719	SOX2.p2	AB209136|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr13_+_52158483_52158591	0.182608	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg19_v1_chr14_+_20611894_20611894	0.182326	SOX2.p2	NM_001004724|OR4N5|390437|olfactory receptor, family 4, subfamily N, member 5
hg19_v1_chr1_-_186430216_186430238	0.182117	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg19_v1_chr2_+_11682787_11682815	0.181972	SOX2.p2	BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr4_+_72102249_72102324	0.181834	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr19_+_52839497_52839610	0.18181	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg19_v1_chr21_+_27107522_27107531	0.181755	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr5_-_136834887_136835074	0.181739	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v1_chr3_-_49229290_49229290	0.181535	SOX2.p2	NM_001080528|LOC646498|646498|uncharacterized LOC646498
hg19_v1_chr6_-_130536417_130536493	0.181199	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chr14_+_63671101_63671261	0.18095	SOX2.p2	NM_020663|RHOJ|57381|ras homolog gene family, member J	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg19_v1_chr6_+_26156558_26156639	0.180907	SOX2.p2	NM_005321|HIST1H1E|3008|histone cluster 1, H1e	BC096168|HIST1H1E|3008|histone cluster 1, H1e	BC096169|HIST1H1E|3008|histone cluster 1, H1e	BC096170|HIST1H1E|3008|histone cluster 1, H1e	BC099632|HIST1H1E|3008|histone cluster 1, H1e	EF065554|HIST1H1E|3008|histone cluster 1, H1e	EF065555|HIST1H1E|3008|histone cluster 1, H1e
hg19_v1_chr19_+_10764987_10765105	0.180729	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chrX_+_14547419_14547482	0.180529	SOX2.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg19_v1_chr1_+_62660473_62660560	0.180406	SOX2.p2	NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1	NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1	BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1	BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1	AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1	AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1	AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1	BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1
hg19_v1_chr17_-_56609361_56609363	0.1803	SOX2.p2	BC018055|SEPT4|5414|septin 4
hg19_v1_chr2_+_231729638_231729653	0.180296	SOX2.p2	AK075361|ITM2C|81618|integral membrane protein 2C	AK090975|ITM2C|81618|integral membrane protein 2C	AK303199|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr14_+_20978611_20978630	0.180034	SOX2.p2	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)
hg19_v1_chr11_-_72380107_72380107	0.179929	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr5_-_171710642_171710767	0.179887	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg19_v1_chr4_+_144435076_144435153	0.179812	SOX2.p2	
hg19_v1_chr11_+_5905500_5905522	0.179725	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg19_v1_chr18_+_32073343_32073384	0.179398	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr5_+_88185257_88185272	0.17923	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg19_v1_chr17_+_61851557_61851584	0.178728	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg19_v1_chr14_+_69658215_69658290	0.177675	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr15_-_70341870_70341948	0.177648	SOX2.p2	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr13_-_27334777_27334929	0.177553	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg19_v1_chr16_-_49315379_49315407	0.177343	SOX2.p2	
hg19_v1_chr22_+_24115035_24115056	0.177186	SOX2.p2	AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)
hg19_v1_chr9_+_39884941_39884982	0.176648	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr5_-_121413906_121413961	0.176496	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg19_v1_chr20_+_44036940_44037106	0.176369	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr11_+_36616039_36616170	0.176296	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg19_v1_chrY_-_19882311_19882439	0.17608	SOX2.p2	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked
hg19_v1_chr10_-_30316338_30316525	0.176018	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg19_v1_chr3_-_160167600_160167647	0.17557	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg19_v1_chr6_-_52860076_52860179	0.175494	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg19_v1_chr4_+_106631966_106631969	0.175289	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr11_+_94758421_94758421	0.175268	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg19_v1_chr9_+_35538628_35538628	0.175232	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr19_-_11616395_11616659	0.175118	SOX2.p2	HQ258023|ZNF653|115950|zinc finger protein 653	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg19_v1_chr10_-_23633771_23633771	0.174744	SOX2.p2	BC035732|C10orf67|256815|chromosome 10 open reading frame 67	NM_153714|C10orf67|256815|chromosome 10 open reading frame 67
hg19_v1_chr7_+_94024201_94024342	0.174652	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr4_+_15683402_15683503	0.174645	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr5_-_137089990_137090031	0.174564	SOX2.p2	U23803|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC019271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC001008|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC011972|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr13_+_98795468_98795504	0.174212	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr2_-_209028288_209028365	0.173548	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg19_v1_chr1_+_104198301_104198427	0.17353	SOX2.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	AK313275|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr5_-_172755195_172755329	0.173522	SOX2.p2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg19_v1_chr16_+_67840976_67841062	0.173453	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg19_v1_chr11_-_77184549_77185116	0.173346	SOX2.p2	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v1_chr11_+_6866882_6866913	0.173194	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg19_v1_chr17_+_29815018_29815105	0.172963	SOX2.p2	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)
hg19_v1_chr7_+_2598712_2598782	0.17289	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg19_v1_chr10_-_45455136_45455158	0.172727	SOX2.p2	AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)
hg19_v1_chr11_+_4615268_4615268	0.172542	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg19_v1_chr2_+_27805892_27805979	0.17202	SOX2.p2	NM_032434|ZNF512|84450|zinc finger protein 512	BC093041|ZNF512|84450|zinc finger protein 512	AK293771|ZNF512|84450|zinc finger protein 512	AK316299|ZNF512|84450|zinc finger protein 512	BC043221|ZNF512|84450|zinc finger protein 512	AK057028|ZNF512|84450|zinc finger protein 512	BX647996|ZNF512|84450|zinc finger protein 512	AK299818|ZNF512|84450|zinc finger protein 512	BC015707|ZNF512|84450|zinc finger protein 512	AK294055|ZNF512|84450|zinc finger protein 512	AK316011|ZNF512|84450|zinc finger protein 512
hg19_v1_chr2_-_39664291_39664311	0.17191	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr1_+_154193294_154193454	0.171678	SOX2.p2	NM_014847|UBAP2L|9898|ubiquitin associated protein 2-like	AK302662|UBAP2L|9898|ubiquitin associated protein 2-like	AK303533|UBAP2L|9898|ubiquitin associated protein 2-like	AJ243668|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr1_+_244998592_244998826	0.171607	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A
hg19_v1_chr1_+_200860619_200860674	0.171409	SOX2.p2	NM_018265|C1orf106|55765|chromosome 1 open reading frame 106	AK001583|C1orf106|55765|chromosome 1 open reading frame 106	AK001763|C1orf106|55765|chromosome 1 open reading frame 106	BC106877|C1orf106|55765|chromosome 1 open reading frame 106
hg19_v1_chr18_+_43304091_43304117	0.171367	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v1_chrX_-_16888462_16888533	0.17135	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr5_+_138677546_138677568	0.171102	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr17_-_62914902_62914902	0.171088	SOX2.p2	AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3	NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg19_v1_chr4_-_155412411_155412554	0.170838	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr15_-_37392358_37392755	0.170668	SOX2.p2	AK056216|MEIS2|4212|Meis homeobox 2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2
hg19_v1_chr6_+_56911422_56911552	0.170636	SOX2.p2	BC012011|KIAA1586|57691|KIAA1586	BC029372|KIAA1586|57691|KIAA1586	AK295519|KIAA1586|57691|KIAA1586	AK290988|KIAA1586|57691|KIAA1586
hg19_v1_chr1_+_66458389_66458417	0.17063	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr10_+_115524577_115524577	0.170558	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chr4_-_69083797_69083797	0.170415	SOX2.p2	AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like	NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like
hg19_v1_chr4_+_25657434_25657486	0.170265	SOX2.p2	NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2
hg19_v1_chr17_-_79869033_79869105	0.17018	SOX2.p2	AK297996|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine	AK093328|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine
hg19_v1_chr6_+_153071931_153072041	0.169939	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg19_v1_chr11_-_63684570_63684709	0.169864	SOX2.p2	AB593132|RCOR2|283248|REST corepressor 2
hg19_v1_chr4_-_46995440_46995553	0.169854	SOX2.p2	DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v1_chr5_+_86564146_86564164	0.169665	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr11_+_63753902_63753938	0.169589	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr2_-_198650008_198650073	0.169472	SOX2.p2	AF272858|BOLL|66037|bol, boule-like (Drosophila)	BC033674|BOLL|66037|bol, boule-like (Drosophila)	AK098824|BOLL|66037|bol, boule-like (Drosophila)	AK058099|BOLL|66037|bol, boule-like (Drosophila)	NM_033030|BOLL|66037|bol, boule-like (Drosophila)
hg19_v1_chr1_-_179112178_179112223	0.169434	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg19_v1_chr10_+_82297657_82297657	0.169153	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg19_v1_chr17_+_79650961_79651022	0.16888	SOX2.p2	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr17_-_76921205_76921452	0.168595	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr9_-_37465250_37465271	0.167379	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr12_-_24102563_24102641	0.167338	SOX2.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr6_-_10694837_10694838	0.167206	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg19_v1_chr2_-_55277459_55277586	0.167195	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg19_v1_chr9_-_36401149_36401201	0.167062	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg19_v1_chr1_+_151630710_151630762	0.16706	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg19_v1_chrX_+_101854095_101854275	0.166465	SOX2.p2	AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5	BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough
hg19_v1_chr17_-_79829272_79829284	0.166322	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr4_+_88720701_88720741	0.166305	SOX2.p2	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg19_v1_chr17_+_42785975_42786050	0.165924	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr17_-_56406120_56406151	0.165399	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg19_v1_chr10_+_118350470_118350641	0.165368	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg19_v1_chr1_-_45672225_45672278	0.165281	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg19_v1_chr3_+_178866124_178866352	0.165007	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr3_+_126423037_126423118	0.164989	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg19_v1_chr8_-_11929255_11929255	0.164933	SOX2.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg19_v1_chr16_+_66400585_66400619	0.164927	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg19_v1_chr3_-_149095517_149095567	0.164845	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr12_-_111893857_111893989	0.164659	SOX2.p2	
hg19_v1_chr9_+_134000939_134001009	0.164421	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg19_v1_chr1_-_109935869_109935978	0.164387	SOX2.p2	AK310147|SORT1|6272|sortilin 1	AK301548|SORT1|6272|sortilin 1	NM_001205228|SORT1|6272|sortilin 1
hg19_v1_chr7_-_126883568_126883568	0.163655	SOX2.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr10_-_90712510_90712579	0.162888	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chr15_+_40886217_40886233	0.16287	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr17_+_64831234_64831237	0.162644	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg19_v1_chr1_+_183774214_183774368	0.162384	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr2_+_61389628_61389628	0.162345	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg19_v1_chr19_-_57656569_57656569	0.16133	SOX2.p2	AF365931|ZIM3|114026|zinc finger, imprinted 3	NM_052882|ZIM3|114026|zinc finger, imprinted 3
hg19_v1_chr9_-_98269686_98269714	0.161111	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg19_v1_chr7_-_128415843_128415843	0.16091	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg19_v1_chr1_+_2036154_2036154	0.160481	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr8_-_93107643_93107711	0.16034	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr19_-_53233134_53233134	0.160314	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg19_v1_chr1_+_108992903_108992942	0.160138	SOX2.p2	NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6	NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg19_v1_chr2_-_120124257_120124419	0.160058	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg19_v1_chr18_+_56530060_56530179	0.159793	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chr3_-_186857188_186857324	0.15945	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr8_-_94179078_94179078	0.159268	SOX2.p2	BC089453|LOC389676|389676|uncharacterized LOC389676	NM_001242668|LOC389676|389676|uncharacterized LOC389676
hg19_v1_chr17_-_79849362_79849455	0.159027	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg19_v1_chr9_-_32550818_32550908	0.158447	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr7_+_149570004_149570080	0.158442	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg19_v1_chr12_+_54674531_54674593	0.158191	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg19_v1_chr1_+_33004969_33005120	0.15802	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr2_+_66662692_66662988	0.157584	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg19_v1_chr1_-_101360245_101360290	0.157537	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr6_+_15246299_15246526	0.157355	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr8_+_17433941_17433941	0.157087	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg19_v1_chr2_+_48757063_48757180	0.156651	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg19_v1_chr13_+_34392254_34392315	0.156502	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr5_-_172755418_172755468	0.156446	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg19_v1_chr10_-_115933884_115933981	0.156301	SOX2.p2	BC100670|C10orf118|55088|chromosome 10 open reading frame 118	BC103499|C10orf118|55088|chromosome 10 open reading frame 118	BC103504|C10orf118|55088|chromosome 10 open reading frame 118	BC105632|C10orf118|55088|chromosome 10 open reading frame 118	BC152306|C10orf118|55088|chromosome 10 open reading frame 118	BC107430|C10orf118|55088|chromosome 10 open reading frame 118	BC070368|C10orf118|55088|chromosome 10 open reading frame 118	BX537964|C10orf118|55088|chromosome 10 open reading frame 118	AK307517|C10orf118|55088|chromosome 10 open reading frame 118	AK092620|C10orf118|55088|chromosome 10 open reading frame 118	BC020842|C10orf118|55088|chromosome 10 open reading frame 118	BC030557|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr2_+_206547131_206547226	0.156206	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg19_v1_chr1_+_28261503_28261620	0.155811	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v1_chr11_-_92930978_92930997	0.15573	SOX2.p2	
hg19_v1_chr2_-_70314065_70314161	0.155387	SOX2.p2	BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)
hg19_v1_chr21_-_27512668_27512777	0.155375	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr1_+_1115076_1115109	0.155173	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg19_v1_chr19_-_44123732_44123767	0.154735	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg19_v1_chr15_+_40453263_40453421	0.154691	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr4_-_76598611_76598693	0.153794	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr4_-_83295136_83295171	0.153486	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr22_+_32149962_32149964	0.153246	SOX2.p2	AK294987|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr17_-_37353731_37353979	0.153204	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr2_+_187454987_187455067	0.152855	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg19_v1_chr17_-_982210_982240	0.152709	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg19_v1_chr1_+_10490429_10490557	0.152708	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr11_-_6008214_6008214	0.152441	SOX2.p2	BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1	NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1
hg19_v1_chr5_+_176875325_176875334	0.152174	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg19_v1_chr8_+_133879202_133879245	0.151919	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg19_v1_chr2_-_172967234_172967477	0.151863	SOX2.p2	HQ258018|DLX2|1746|distal-less homeobox 2	AB208823|DLX2|1746|distal-less homeobox 2	AK297503|DLX2|1746|distal-less homeobox 2	BC032558|DLX2|1746|distal-less homeobox 2	NM_004405|DLX2|1746|distal-less homeobox 2
hg19_v1_chr19_+_16683360_16683434	0.151416	SOX2.p2	
hg19_v1_chr17_-_73511626_73511653	0.151113	SOX2.p2	BC066643|CASKIN2|57513|CASK interacting protein 2	NM_020753|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr7_+_99070515_99070685	0.15031	SOX2.p2	BC089424|ZNF789|285989|zinc finger protein 789	BC050286|ZNF789|285989|zinc finger protein 789	BX648360|ZNF789|285989|zinc finger protein 789
hg19_v1_chr11_-_123625225_123625252	0.15009	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg19_v1_chr12_+_69979268_69979286	0.149954	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr16_-_3068161_3068187	0.149885	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg19_v1_chr13_+_111137249_111137279	0.149756	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg19_v1_chr9_+_135753711_135753826	0.149594	SOX2.p2	BC012940|C9orf9|11092|chromosome 9 open reading frame 9
hg19_v1_chr15_-_59665069_59665072	0.149313	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr22_+_32149936_32149960	0.149014	SOX2.p2	NM_001242897|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr22_-_41682169_41682183	0.148854	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr16_+_2083264_2083296	0.148795	SOX2.p2	NM_001252073|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252075|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252076|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg19_v1_chr15_+_96875793_96875793	0.14871	SOX2.p2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr5_+_140723600_140723602	0.148619	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg19_v1_chr21_-_19191643_19191718	0.14857	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg19_v1_chr20_+_23345020_23345020	0.148435	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg19_v1_chr7_+_156803599_156803613	0.148229	SOX2.p2	BC022831|LOC645249|645249|uncharacterized LOC645249	BC033117|LOC645249|645249|uncharacterized LOC645249
hg19_v1_chr14_-_21979364_21979506	0.14798	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg19_v1_chr6_+_31982538_31982619	0.147857	SOX2.p2	BC063289|C4A|720|complement component 4A (Rodgers blood group)	AK304564|C4B|721|complement component 4B (Chido blood group)	NM_001002029|C4B|721|complement component 4B (Chido blood group)	NM_001242823|LOC100293534|100293534|complement C4-B-like	NM_001252204|C4A|720|complement component 4A (Rodgers blood group)	NM_007293|C4A|720|complement component 4A (Rodgers blood group)	AB209989|C4A|720|complement component 4A (Rodgers blood group)	BC146673|C4A|720|complement component 4A (Rodgers blood group)	BC151204|C4A|720|complement component 4A (Rodgers blood group)	AK293364|C4A|720|complement component 4A (Rodgers blood group)	BC144546|C4A|720|complement component 4A (Rodgers blood group)	BC146849|C4A|720|complement component 4A (Rodgers blood group)	BC171786|C4A|720|complement component 4A (Rodgers blood group)
hg19_v1_chr14_+_23842017_23842327	0.147813	SOX2.p2	AF461739|IL25|64806|interleukin 25	NM_172314|IL25|64806|interleukin 25	AF305200|IL25|64806|interleukin 25	AY359127|IL25|64806|interleukin 25	NM_022789|IL25|64806|interleukin 25	BC104929|IL25|64806|interleukin 25	BC104931|IL25|64806|interleukin 25	AF458059|IL25|64806|interleukin 25	BC069565|IL25|64806|interleukin 25	EU831823|IL25|64806|interleukin 25	EU831900|IL25|64806|interleukin 25
hg19_v1_chr2_-_110874142_110874142	0.147763	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr1_+_109419601_109419621	0.147368	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr8_-_38326115_38326188	0.147348	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr14_+_37131064_37131105	0.147279	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg19_v1_chr5_+_76382458_76382591	0.146734	SOX2.p2	AK311179|LOC728723|728723|uncharacterized LOC728723
hg19_v1_chr8_-_133492751_133492824	0.145634	SOX2.p2	BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v1_chr20_+_9495426_9495499	0.145331	SOX2.p2	
hg19_v1_chr1_-_153013593_153013594	0.14484	SOX2.p2	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg19_v1_chr11_+_63754300_63754327	0.144583	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr3_-_15839674_15839690	0.144351	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chrX_-_132092224_132092289	0.144272	SOX2.p2	AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2
hg19_v1_chrX_-_115085421_115085457	0.144261	SOX2.p2	BC003645|LOC642776|642776|uncharacterized LOC642776
hg19_v1_chr3_-_111314181_111314181	0.144094	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr2_-_180427314_180427314	0.14401	SOX2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg19_v1_chr11_+_101983170_101983244	0.14371	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr20_-_56286540_56286540	0.14358	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg19_v1_chr1_-_93399531_93399654	0.143555	SOX2.p2	
hg19_v1_chr5_-_148016576_148016623	0.143212	SOX2.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg19_v1_chr2_+_46926323_46926479	0.142773	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr2_-_134326030_134326047	0.142284	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr3_-_57583090_57583148	0.142039	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr2_+_122407564_122407726	0.141832	SOX2.p2	BC047384|LOC254128|254128|uncharacterized LOC254128	BC036624|LOC254128|254128|uncharacterized LOC254128	AK098264|LOC254128|254128|uncharacterized LOC254128
hg19_v1_chr6_+_56954801_56954828	0.14132	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg19_v1_chr10_+_35894337_35894337	0.14131	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg19_v1_chr3_+_179280686_179280733	0.141046	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg19_v1_chr8_+_61429390_61429491	0.14077	SOX2.p2	NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr1_+_92495484_92495636	0.140606	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg19_v1_chr6_-_10415217_10415334	0.140594	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr15_-_45493372_45493372	0.140451	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg19_v1_chr14_+_20403766_20403766	0.140347	SOX2.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg19_v1_chr5_+_156696351_156696361	0.140338	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr3_+_89156804_89156897	0.140083	SOX2.p2	M83941|EPHA3|2042|EPH receptor A3	AF213460|EPHA3|2042|EPH receptor A3	BC026247|EPHA3|2042|EPH receptor A3	AK291411|EPHA3|2042|EPH receptor A3
hg19_v1_chr17_+_53344966_53345007	0.13989	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg19_v1_chr1_+_32827797_32827861	0.139834	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg19_v1_chr11_-_63536112_63536281	0.139777	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg19_v1_chr5_+_148961035_148961134	0.139554	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v1_chr8_-_144241678_144241701	0.139293	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg19_v1_chr16_+_88636810_88636811	0.139241	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr3_+_111718006_111718269	0.139082	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg19_v1_chr15_-_37390372_37390561	0.138928	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg19_v1_chr3_-_71179736_71179745	0.138915	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg19_v1_chr2_+_185463292_185463319	0.138864	SOX2.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr1_-_157567733_157567869	0.138644	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg19_v1_chr2_+_182850550_182850748	0.138259	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v1_chr14_+_24641084_24641101	0.138025	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg19_v1_chrX_+_136648313_136648345	0.137887	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3	NM_003413|ZIC3|7547|Zic family member 3
hg19_v1_chr1_+_45792544_45792576	0.137635	SOX2.p2	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg19_v1_chr5_+_140771482_140771482	0.137474	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr17_-_79829237_79829260	0.13736	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr8_-_133492556_133492690	0.137201	SOX2.p2	AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v1_chr11_-_85430117_85430210	0.136996	SOX2.p2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr17_-_79650755_79650953	0.136962	SOX2.p2	BC063687|ARL16|339231|ADP-ribosylation factor-like 16	AK303526|ARL16|339231|ADP-ribosylation factor-like 16	BC042380|ARL16|339231|ADP-ribosylation factor-like 16	AK304718|ARL16|339231|ADP-ribosylation factor-like 16	AK095847|ARL16|339231|ADP-ribosylation factor-like 16	HQ258109|ARL16|339231|ADP-ribosylation factor-like 16	BC105076|ARL16|339231|ADP-ribosylation factor-like 16	BC105078|ARL16|339231|ADP-ribosylation factor-like 16	NM_001040025|ARL16|339231|ADP-ribosylation factor-like 16
hg19_v1_chr5_+_170847059_170847203	0.136891	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr12_-_102455739_102455761	0.136877	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr19_-_52674895_52674895	0.13686	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg19_v1_chr1_+_39875175_39875175	0.136728	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg19_v1_chr3_-_93782066_93782066	0.136658	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chrY_-_21154560_21154979	0.136486	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr12_+_69979202_69979247	0.135738	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr6_+_17282931_17283077	0.135161	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr1_-_38019828_38019954	0.135147	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg19_v1_chr7_-_126892304_126892427	0.134386	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr9_-_129870311_129870393	0.134314	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg19_v1_chr17_+_66031885_66031892	0.133634	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr1_+_84630374_84630386	0.133363	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr20_-_62462568_62462626	0.132732	SOX2.p2	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46	BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46
hg19_v1_chr12_+_7456927_7456927	0.13248	SOX2.p2	NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4
hg19_v1_chr8_-_38325524_38325691	0.132248	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chrX_+_117526665_117526710	0.131819	SOX2.p2	AL834210|WDR44|54521|WD repeat domain 44
hg19_v1_chr1_-_247171354_247171394	0.131738	SOX2.p2	BC055096|ZNF695|57116|zinc finger protein 695	NM_001204221|ZNF695|57116|zinc finger protein 695	NM_020394|ZNF695|57116|zinc finger protein 695
hg19_v1_chr16_-_55989942_55989942	0.131071	SOX2.p2	AK294334|CES5A|221223|carboxylesterase 5A	NM_001190158|CES5A|221223|carboxylesterase 5A
hg19_v1_chr5_+_65222560_65222600	0.131026	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr1_-_230991781_230991781	0.13055	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg19_v1_chr12_-_62997207_62997213	0.129673	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg19_v1_chr13_-_45150601_45150700	0.129534	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr2_+_220492286_220492423	0.12914	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr8_+_17780492_17780499	0.128949	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg19_v1_chr8_-_81787015_81787015	0.128808	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr3_-_11761946_11762284	0.128691	SOX2.p2	D50911|VGLL4|9686|vestigial like 4 (Drosophila)	BC001514|VGLL4|9686|vestigial like 4 (Drosophila)	AK130542|VGLL4|9686|vestigial like 4 (Drosophila)	BC000763|VGLL4|9686|vestigial like 4 (Drosophila)	BC003038|VGLL4|9686|vestigial like 4 (Drosophila)	NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chrY_+_27768241_27768308	0.128416	SOX2.p2	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1	BC033041|CDY1|9085|chromodomain protein, Y-linked, 1	NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1	NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1	AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1	AF080597|CDY1|9085|chromodomain protein, Y-linked, 1
hg19_v1_chr15_+_40453209_40453250	0.128237	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr20_-_40246991_40247132	0.128231	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg19_v1_chr3_-_71542628_71542706	0.128181	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg19_v1_chrX_-_128977291_128977560	0.127755	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr6_-_31510251_31510251	0.127567	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr4_-_153456152_153456436	0.127527	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr16_+_67465019_67465041	0.127475	SOX2.p2	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2
hg19_v1_chr3_-_55521330_55521334	0.127384	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr5_+_140501579_140501580	0.127187	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr12_+_98909414_98909470	0.127095	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg19_v1_chr3_+_138066489_138066538	0.126605	SOX2.p2	NM_001252091|MRAS|22808|muscle RAS oncogene homolog	NM_012219|MRAS|22808|muscle RAS oncogene homolog	AK124954|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr13_+_30002776_30002845	0.126278	SOX2.p2	BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2	NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2	AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2
hg19_v1_chr4_-_107288591_107288591	0.126172	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg19_v1_chr17_+_59477169_59477304	0.126108	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg19_v1_chr3_-_48956817_48956817	0.125953	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg19_v1_chr13_-_52733669_52733784	0.125944	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chrX_+_48916515_48916551	0.12589	SOX2.p2	BC008769|CCDC120|90060|coiled-coil domain containing 120	NM_001163322|CCDC120|90060|coiled-coil domain containing 120	NM_033626|CCDC120|90060|coiled-coil domain containing 120	NM_001163321|CCDC120|90060|coiled-coil domain containing 120	NM_001163323|CCDC120|90060|coiled-coil domain containing 120	AK315837|CCDC120|90060|coiled-coil domain containing 120	AK294024|CCDC120|90060|coiled-coil domain containing 120	AK300366|CCDC120|90060|coiled-coil domain containing 120	AK293898|CCDC120|90060|coiled-coil domain containing 120
hg19_v1_chr1_-_117664349_117664410	0.125887	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45
hg19_v1_chr9_-_120177326_120177342	0.125713	SOX2.p2	BX649176|ASTN2|23245|astrotactin 2
hg19_v1_chr4_+_154074269_154074269	0.125701	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr19_+_50192440_50192561	0.125691	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr13_-_45150391_45150470	0.125381	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr15_+_72406598_72406598	0.125354	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg19_v1_chr4_-_83294806_83294938	0.125188	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr9_+_15422630_15422786	0.124823	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr19_+_9473695_9473695	0.124627	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chr3_-_168864066_168864092	0.124624	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr12_-_11062160_11062160	0.124327	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg19_v1_chr11_-_107729492_107729519	0.124166	SOX2.p2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr2_-_39664129_39664290	0.123984	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr12_+_31079615_31079706	0.123888	SOX2.p2	AK293947|TSPAN11|441631|tetraspanin 11
hg19_v1_chr8_+_118147336_118147336	0.123509	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg19_v1_chr4_-_54457628_54457659	0.123494	SOX2.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr15_-_77154284_77154284	0.123446	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg19_v1_chr13_-_24007822_24007859	0.123425	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr11_-_6817013_6817138	0.123396	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg19_v1_chr17_-_37350051_37350135	0.123292	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr9_+_129677046_129677162	0.123113	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg19_v1_chr1_+_185014449_185014558	0.123017	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2
hg19_v1_chr14_+_20344390_20344426	0.122982	SOX2.p2	BC136941|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	BC136942|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	NM_001005501|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2
hg19_v1_chr21_-_42219038_42219064	0.122806	SOX2.p2	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule	NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule	AF217525|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr19_+_45971249_45971290	0.122776	SOX2.p2	EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v1_chr7_-_8301681_8301752	0.122574	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr18_+_71983109_71983109	0.122535	SOX2.p2	CR749350|C18orf63|644041|chromosome 18 open reading frame 63	NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63
hg19_v1_chr14_+_39649711_39649842	0.122504	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg19_v1_chr5_+_34656367_34656459	0.122257	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr19_+_9434447_9434447	0.121814	SOX2.p2	NM_001202406|ZNF559|84527|zinc finger protein 559	NM_001202407|ZNF559|84527|zinc finger protein 559	NM_001202408|ZNF559|84527|zinc finger protein 559	NM_001202409|ZNF559|84527|zinc finger protein 559	NM_001202410|ZNF559|84527|zinc finger protein 559	NM_001202411|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559
hg19_v1_chr11_+_5968576_5968576	0.121771	SOX2.p2	NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3
hg19_v1_chr1_-_115053677_115053743	0.121516	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg19_v1_chr3_-_154147503_154147503	0.121441	SOX2.p2	DQ318360|GPR149|344758|G protein-coupled receptor 149	NM_001038705|GPR149|344758|G protein-coupled receptor 149
hg19_v1_chr9_+_96846804_96846824	0.121316	SOX2.p2	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg19_v1_chr17_-_76921453_76921501	0.121224	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr5_+_180650274_180650289	0.121011	SOX2.p2	AK027601|TRIM41|90933|tripartite motif containing 41	AX775793|TRIM41|90933|tripartite motif containing 41	AX775799|TRIM41|90933|tripartite motif containing 41	AX775801|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr7_-_156803224_156803366	0.12089	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr19_+_10765106_10765230	0.120833	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr10_-_127408000_127408068	0.120228	SOX2.p2	AK094354|FLJ37035|399821|uncharacterized LOC399821
hg19_v1_chr3_-_55521567_55521669	0.119295	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr10_-_21435487_21435487	0.119005	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg19_v1_chr6_-_31782786_31782834	0.118999	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg19_v1_chr3_-_114478117_114478123	0.118771	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr19_+_13135809_13135860	0.118587	SOX2.p2	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr5_-_122759003_122759285	0.118562	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg19_v1_chr17_+_29158948_29159022	0.118244	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg19_v1_chr19_-_12834628_12834841	0.117573	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg19_v1_chr11_-_111782447_111782539	0.117433	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg19_v1_chr9_-_35828728_35828743	0.11735	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg19_v1_chr3_+_4535030_4535033	0.116579	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v1_chr7_-_148580600_148580626	0.116542	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr8_+_12869772_12869772	0.116491	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg19_v1_chr8_+_76320106_76320270	0.116457	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr3_-_87040268_87040272	0.116101	SOX2.p2	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)
hg19_v1_chr6_+_25279765_25280023	0.116091	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr6_-_25571218_25571298	0.115999	SOX2.p2	
hg19_v1_chr11_+_111411232_111411232	0.115614	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg19_v1_chrX_+_135579237_135579398	0.115578	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chrX_+_30265270_30265322	0.115245	SOX2.p2	NM_177404|MAGEB1|4112|melanoma antigen family B, 1	BC013772|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr6_+_37403405_37403469	0.114999	SOX2.p2	
hg19_v1_chr12_+_58138663_58138937	0.114958	SOX2.p2	AK315765|TSPAN31|6302|tetraspanin 31	NM_005981|TSPAN31|6302|tetraspanin 31	BX647402|TSPAN31|6302|tetraspanin 31	BC010377|TSPAN31|6302|tetraspanin 31	U01160|TSPAN31|6302|tetraspanin 31	AK294128|TSPAN31|6302|tetraspanin 31	CR407647|TSPAN31|6302|tetraspanin 31	DQ892877|TSPAN31|6302|tetraspanin 31	DQ896127|TSPAN31|6302|tetraspanin 31
hg19_v1_chr1_+_211519705_211519705	0.114932	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg19_v1_chr3_+_46616044_46616044	0.114293	SOX2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg19_v1_chr4_-_83295037_83295123	0.113947	SOX2.p2	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr1_-_247494990_247495044	0.113712	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg19_v1_chr22_-_27014037_27014088	0.113519	SOX2.p2	BC036790|CRYBB1|1414|crystallin, beta B1
hg19_v1_chr8_-_105601124_105601226	0.113186	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr11_-_1771823_1771826	0.113079	SOX2.p2	NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10
hg19_v1_chr2_-_169746921_169746962	0.113004	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr12_-_52995215_52995321	0.112965	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	HQ258454|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg19_v1_chr1_+_112298180_112298258	0.112771	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg19_v1_chr1_-_45956795_45956871	0.112637	SOX2.p2	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg19_v1_chr19_-_44809126_44809203	0.112244	SOX2.p2	AK315242|ZNF235|9310|zinc finger protein 235	BC105807|ZNF235|9310|zinc finger protein 235	BC143484|ZNF235|9310|zinc finger protein 235	BC117215|ZNF235|9310|zinc finger protein 235	BC143482|ZNF235|9310|zinc finger protein 235	AF027513|ZNF235|9310|zinc finger protein 235	AK307103|ZNF235|9310|zinc finger protein 235	AK300317|ZNF235|9310|zinc finger protein 235	NM_004234|ZNF235|9310|zinc finger protein 235
hg19_v1_chr2_-_109150596_109150695	0.111243	SOX2.p2	BC004487|FLJ38668|644903|uncharacterized LOC644903	AK095987|FLJ38668|644903|uncharacterized LOC644903
hg19_v1_chr1_-_115259381_115259388	0.110921	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chrX_-_16888175_16888436	0.11075	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr6_+_126070724_126070731	0.110721	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr12_+_56324945_56325082	0.110184	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg19_v1_chr4_+_5053239_5053322	0.110133	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr14_-_54955664_54955707	0.109944	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chr19_-_56739658_56739679	0.109375	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg19_v1_chr19_+_45394459_45394509	0.109192	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v1_chr9_+_125512018_125512126	0.108899	SOX2.p2	NM_001004453|OR1L6|392390|olfactory receptor, family 1, subfamily L, member 6
hg19_v1_chr12_-_80307690_80307690	0.108822	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chr12_-_39836760_39837238	0.108808	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg19_v1_chr8_-_33457435_33457484	0.108146	SOX2.p2	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr9_-_134955056_134955242	0.107901	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr19_-_7701852_7701854	0.107729	SOX2.p2	
hg19_v1_chr5_-_111093030_111093133	0.107608	SOX2.p2	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr14_+_73603207_73603217	0.107575	SOX2.p2	AJ008005|PSEN1|5663|presenilin 1
hg19_v1_chr19_+_13135745_13135776	0.107516	SOX2.p2	L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr15_-_43212911_43213053	0.107155	SOX2.p2	AF525400|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg19_v1_chr4_+_1873149_1873247	0.107026	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr11_-_56380977_56380977	0.107005	SOX2.p2	NM_001004740|OR5M1|390168|olfactory receptor, family 5, subfamily M, member 1
hg19_v1_chr4_+_119948322_119948327	0.106968	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg19_v1_chr7_-_130353579_130353611	0.106815	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg19_v1_chr7_-_80548322_80548546	0.106541	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v1_chr3_+_14860468_14860468	0.106129	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg19_v1_chr14_-_25519076_25519401	0.106039	SOX2.p2	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)	NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)	BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)
hg19_v1_chr20_+_58630965_58631025	0.105831	SOX2.p2	AK091179|C20orf197|284756|chromosome 20 open reading frame 197	NM_173644|C20orf197|284756|chromosome 20 open reading frame 197
hg19_v1_chr17_+_15602890_15603036	0.105664	SOX2.p2	NM_001130842|ZNF286A|57335|zinc finger protein 286A	NM_020652|ZNF286A|57335|zinc finger protein 286A
hg19_v1_chr3_-_49893885_49894006	0.105516	SOX2.p2	AB451320|TRAIP|10293|TRAF interacting protein	AB451449|TRAIP|10293|TRAF interacting protein	EF036504|TRAIP|10293|TRAF interacting protein	AK225873|TRAIP|10293|TRAF interacting protein	BC000310|TRAIP|10293|TRAF interacting protein	BC019283|TRAIP|10293|TRAF interacting protein	AK292172|TRAIP|10293|TRAF interacting protein	NM_005879|TRAIP|10293|TRAF interacting protein	U77845|TRAIP|10293|TRAF interacting protein	AK295780|TRAIP|10293|TRAF interacting protein
hg19_v1_chr19_-_39523132_39523334	0.105426	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27
hg19_v1_chr13_+_113656076_113656223	0.105065	SOX2.p2	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr19_+_10764896_10764985	0.105044	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr7_+_63773185_63773185	0.104861	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg19_v1_chr18_+_55888799_55888808	0.10482	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr18_-_30352841_30352973	0.104744	SOX2.p2	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)	AB037805|KLHL14|57565|kelch-like 14 (Drosophila)	NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)
hg19_v1_chr17_-_39465504_39465504	0.104615	SOX2.p2	NM_001146182|KRTAP16-1|100505753|keratin associated protein 16-1
hg19_v1_chr9_+_125423844_125423994	0.104568	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg19_v1_chr6_+_126661221_126661319	0.104369	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr1_-_79472360_79472494	0.10425	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v1_chr15_-_89089792_89089911	0.104016	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg19_v1_chr16_+_88636818_88636839	0.103973	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr15_-_99791399_99791434	0.103779	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr10_+_88985204_88985256	0.103772	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001099338|FAM22A|728118|family with sequence similarity 22, member A	AB095940|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr16_+_68573115_68573281	0.1036	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chrX_+_49217770_49217780	0.103469	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894341|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr1_-_57888785_57888871	0.103371	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr4_-_138453564_138453620	0.103284	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg19_v1_chr8_-_103137134_103137134	0.103234	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg19_v1_chr17_-_26926044_26926071	0.103025	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr10_+_115999009_115999310	0.103005	SOX2.p2	AK122716|VWA2|340706|von Willebrand factor A domain containing 2	NM_198496|VWA2|340706|von Willebrand factor A domain containing 2	AJ536328|VWA2|340706|von Willebrand factor A domain containing 2	AJ616914|VWA2|340706|von Willebrand factor A domain containing 2	BC128588|VWA2|340706|von Willebrand factor A domain containing 2	AY572972|VWA2|340706|von Willebrand factor A domain containing 2	BC143380|VWA2|340706|von Willebrand factor A domain containing 2
hg19_v1_chr1_-_153606567_153606567	0.102679	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr20_+_20037289_20037351	0.102666	SOX2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg19_v1_chr6_+_100054649_100054649	0.10236	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg19_v1_chrX_+_27826106_27826124	0.102265	SOX2.p2	AK057527|MAGEB10|139422|melanoma antigen family B, 10	NM_182506|MAGEB10|139422|melanoma antigen family B, 10	BC101307|MAGEB10|139422|melanoma antigen family B, 10	BC101309|MAGEB10|139422|melanoma antigen family B, 10	BC101310|MAGEB10|139422|melanoma antigen family B, 10
hg19_v1_chr12_-_6772252_6772360	0.102094	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg19_v1_chr4_-_95263986_95264026	0.101867	SOX2.p2	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg19_v1_chr17_+_79651042_79651048	0.101759	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr11_+_450346_450396	0.10145	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr12_-_57634474_57634526	0.101232	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v1_chr1_+_161068150_161068191	0.101067	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg19_v1_chr17_-_48271968_48272123	0.100986	SOX2.p2	
hg19_v1_chr1_-_161168816_161168846	0.100825	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg19_v1_chr3_-_183145854_183146025	0.100806	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg19_v1_chr1_+_20208923_20209003	0.100634	SOX2.p2	
hg19_v1_chr7_+_20686965_20687217	0.10057	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v1_chr1_+_20208837_20208891	0.100541	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr17_-_3030844_3030958	0.100492	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg19_v1_chr19_+_56166418_56166470	0.100319	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chrX_+_100878101_100878182	0.100213	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg19_v1_chr6_-_29012951_29013016	0.100117	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg19_v1_chr17_+_4046417_4046549	0.100109	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr8_-_7274353_7274353	0.0999848	SOX2.p2	NM_001205266|DEFB4B|100289462|defensin, beta 4B
hg19_v1_chr11_+_6942204_6942232	0.0997016	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg19_v1_chr15_+_41136178_41136522	0.0995456	SOX2.p2	AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr1_-_58716207_58716212	0.0995213	SOX2.p2	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)	NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr12_-_120907514_120907527	0.099362	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr10_+_118305427_118305604	0.0993323	SOX2.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg19_v1_chr1_+_150039341_150039438	0.0988821	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr11_-_73881859_73882278	0.0988616	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg19_v1_chr1_-_32827843_32827843	0.0987504	SOX2.p2	NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071
hg19_v1_chr3_-_125775609_125775617	0.0982024	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr4_+_123747815_123747873	0.0981955	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg19_v1_chr1_+_33004771_33004771	0.0981715	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr19_-_10047014_10047235	0.0978632	SOX2.p2	DQ891083|OLFM2|93145|olfactomedin 2	DQ894265|OLFM2|93145|olfactomedin 2	AF131839|OLFM2|93145|olfactomedin 2	BC011361|OLFM2|93145|olfactomedin 2	NM_058164|OLFM2|93145|olfactomedin 2
hg19_v1_chr12_-_11422640_11422640	0.0975437	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg19_v1_chr2_-_31352489_31352505	0.0974318	SOX2.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr19_-_46220589_46220638	0.0972467	SOX2.p2	
hg19_v1_chr17_+_42264582_42264653	0.0970289	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr9_+_132597651_132597717	0.0966421	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr16_-_28550227_28550317	0.0960761	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg19_v1_chr4_+_55095433_55095495	0.0959971	SOX2.p2	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg19_v1_chrX_+_48368063_48368208	0.0953137	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr7_-_20826503_20826565	0.095212	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg19_v1_chr1_+_153190059_153190059	0.09485	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg19_v1_chr3_+_61547882_61548071	0.0943438	SOX2.p2	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G
hg19_v1_chr19_+_48673936_48673971	0.0941563	SOX2.p2	BC043386|C19orf68|374920|chromosome 19 open reading frame 68
hg19_v1_chr6_-_79787784_79787854	0.0941111	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr4_-_89080010_89080065	0.0940758	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr13_-_51417831_51418074	0.0939071	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg19_v1_chr7_-_108524636_108524636	0.0938502	SOX2.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg19_v1_chrX_+_49326599_49326609	0.0930849	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr19_-_58609590_58609599	0.0929528	SOX2.p2	AK296417|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr3_-_45267804_45267846	0.0927349	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr16_+_31494438_31494438	0.0926583	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg19_v1_chr4_+_95128750_95128872	0.0924668	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr1_+_20208908_20208920	0.0923113	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr22_+_17640241_17640288	0.0921484	SOX2.p2	AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)
hg19_v1_chr2_+_158114109_158114477	0.0920954	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v1_chrX_-_133931146_133931261	0.0919724	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg19_v1_chr17_+_79651072_79651096	0.0918186	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr18_-_29264394_29264685	0.0917279	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chrY_+_20137666_20137693	0.0914025	SOX2.p2	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr12_-_7848324_7848388	0.0914014	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg19_v1_chr5_-_146889618_146889635	0.0913729	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr2_+_84743576_84743578	0.0908413	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg19_v1_chr2_+_219433517_219433677	0.0907965	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg19_v1_chr5_+_70196489_70196677	0.0906673	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr4_+_86699846_86699850	0.090526	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr19_-_36909463_36909579	0.0904252	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg19_v1_chr1_-_248790428_248790490	0.0903934	SOX2.p2	NM_001001964|OR2T11|127077|olfactory receptor, family 2, subfamily T, member 11	BC140749|OR2T11|127077|olfactory receptor, family 2, subfamily T, member 11
hg19_v1_chr14_+_52327416_52327456	0.0901079	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr6_-_56716713_56716715	0.0900745	SOX2.p2	AK299898|DST|667|dystonin
hg19_v1_chr17_+_79651035_79651041	0.0899969	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr11_-_6048970_6048970	0.0897302	SOX2.p2	BC136904|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1	BC136911|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1	NM_001001917|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1
hg19_v1_chr3_-_124930192_124930242	0.089701	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr16_-_75299713_75299938	0.0896578	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr10_+_127408225_127408399	0.0894985	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr4_-_120550142_120550183	0.0892942	SOX2.p2	
hg19_v1_chr7_+_100331248_100331248	0.0892418	SOX2.p2	AF332975|ZAN|7455|zonadhesin	AF332976|ZAN|7455|zonadhesin	AF332977|ZAN|7455|zonadhesin	AF332978|ZAN|7455|zonadhesin	AF332979|ZAN|7455|zonadhesin	AF332980|ZAN|7455|zonadhesin	NM_003386|ZAN|7455|zonadhesin	NM_173059|ZAN|7455|zonadhesin
hg19_v1_chr1_-_212588235_212588236	0.0892404	SOX2.p2	AK001736|TMEM206|55248|transmembrane protein 206
hg19_v1_chr5_+_53751430_53751619	0.0890099	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	HQ258075|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg19_v1_chr3_+_10068139_10068182	0.0889253	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr7_+_72300044_72300155	0.0886169	SOX2.p2	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg19_v1_chr17_-_26926015_26926038	0.0884656	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr19_-_12595547_12595605	0.0880998	SOX2.p2	BC136746|ZNF709|163051|zinc finger protein 709	BC136751|ZNF709|163051|zinc finger protein 709	AK290911|ZNF709|163051|zinc finger protein 709	BC036481|ZNF709|163051|zinc finger protein 709
hg19_v1_chr11_-_111750144_111750180	0.0880529	SOX2.p2	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg19_v1_chr4_+_5053464_5053590	0.0879035	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr21_-_36231794_36231878	0.0876418	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr2_+_61293362_61293362	0.0874372	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg19_v1_chr16_+_27561441_27561487	0.0868742	SOX2.p2	NM_015202|KIAA0556|23247|KIAA0556	AB011128|KIAA0556|23247|KIAA0556	BC150276|KIAA0556|23247|KIAA0556	BC131508|KIAA0556|23247|KIAA0556
hg19_v1_chr19_-_48673559_48673604	0.0867726	SOX2.p2	M36067|LIG1|3978|ligase I, DNA, ATP-dependent	NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent	AK314210|LIG1|3978|ligase I, DNA, ATP-dependent	AK297296|LIG1|3978|ligase I, DNA, ATP-dependent	AK303644|LIG1|3978|ligase I, DNA, ATP-dependent	AB208791|LIG1|3978|ligase I, DNA, ATP-dependent	AK225863|LIG1|3978|ligase I, DNA, ATP-dependent	AK300370|LIG1|3978|ligase I, DNA, ATP-dependent
hg19_v1_chr15_+_75491232_75491261	0.0866896	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg19_v1_chr18_-_52988916_52989089	0.0865096	SOX2.p2	M74718|TCF4|6925|transcription factor 4	FR748220|TCF4|6925|transcription factor 4	FR748221|TCF4|6925|transcription factor 4	AK300038|TCF4|6925|transcription factor 4	NM_001243234|TCF4|6925|transcription factor 4	NM_001243235|TCF4|6925|transcription factor 4
hg19_v1_chr3_+_183873309_183873421	0.086385	SOX2.p2	BC032459|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	AF006013|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	DQ891616|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	DQ894808|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)
hg19_v1_chr16_-_67217403_67217479	0.0863058	SOX2.p2	AK094787|KIAA0895L|653319|KIAA0895-like	AK096855|KIAA0895L|653319|KIAA0895-like	BC080183|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr7_+_27779706_27779742	0.086103	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr3_+_134514044_134514259	0.0857747	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg19_v1_chr22_-_41682187_41682228	0.0857629	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr1_+_154947116_154947142	0.0856267	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg19_v1_chr9_-_88715024_88715145	0.0855814	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg19_v1_chr8_-_110620220_110620232	0.0854273	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr1_+_82266081_82266081	0.0853521	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr16_-_67217825_67217899	0.0853188	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr2_+_231729501_231729620	0.0848763	SOX2.p2	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr2_-_100722328_100722589	0.084742	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr3_-_182880463_182880666	0.0846642	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr8_-_72273965_72274006	0.0838997	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr15_+_80987953_80988065	0.0838921	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg19_v1_chr3_-_69299305_69299315	0.0835221	SOX2.p2	AK295045|FRMD4B|23150|FERM domain containing 4B
hg19_v1_chr17_-_61819120_61819163	0.0833109	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr11_-_124310980_124311053	0.0831744	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg19_v1_chr7_-_148581379_148581383	0.0830069	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr12_+_22778085_22778210	0.0829418	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr1_+_159259503_159259503	0.0828418	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg19_v1_chr11_-_78052925_78052925	0.0825352	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chrX_+_48242967_48242967	0.0823683	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg19_v1_chr6_+_71136141_71136173	0.0822891	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr7_+_99775346_99775382	0.0821906	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg19_v1_chr21_-_40685697_40685711	0.0820635	SOX2.p2	NM_001007246|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_018963|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_033656|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr1_-_200992824_200992839	0.0819167	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_001252100|KIF21B|23046|kinesin family member 21B	NM_001252102|KIF21B|23046|kinesin family member 21B	NM_001252103|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg19_v1_chr17_-_31204187_31204239	0.0818598	SOX2.p2	BC030602|MYO1D|4642|myosin ID
hg19_v1_chr21_+_27107671_27107726	0.0818349	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr11_+_6897855_6897878	0.0816803	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg19_v1_chr17_+_56769953_56770049	0.0814717	SOX2.p2	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chr3_-_10547340_10547352	0.0814466	SOX2.p2	AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr1_+_40942878_40942886	0.0814228	SOX2.p2	BC041873|ZNF642|339559|zinc finger protein 642
hg19_v1_chr12_+_54519836_54519881	0.0813675	SOX2.p2	BC009385|LOC400043|400043|uncharacterized LOC400043
hg19_v1_chr4_-_120243257_120243315	0.081342	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg19_v1_chr16_-_29937523_29937530	0.0812053	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr3_+_38307297_38307396	0.0811967	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg19_v1_chr17_+_79651052_79651070	0.0811558	SOX2.p2	
hg19_v1_chr17_+_18128868_18129009	0.0806886	SOX2.p2	BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)
hg19_v1_chr10_-_105218644_105218647	0.0806661	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg19_v1_chr5_+_121647385_121647440	0.0804894	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr17_-_79829174_79829235	0.0804692	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr1_+_87794150_87794164	0.0803595	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg19_v1_chr1_+_155294217_155294367	0.0801498	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr3_+_82035288_82035316	0.0793707	SOX2.p2	
hg19_v1_chr14_-_21994342_21994483	0.0793486	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr13_-_50018143_50018220	0.0792789	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr8_-_72756687_72756730	0.0792758	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg19_v1_chr11_-_55371873_55371873	0.0791707	SOX2.p2	BC140727|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11	NM_001004700|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11
hg19_v1_chr1_+_173684061_173684131	0.0791516	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr12_-_91452130_91452130	0.0790724	SOX2.p2	NM_007035|KERA|11081|keratocan
hg19_v1_chr3_+_10068123_10068129	0.078984	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr4_-_170077807_170077832	0.0788495	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr2_-_190044330_190044604	0.0788141	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	M31365|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg19_v1_chr6_+_43211221_43211236	0.0784405	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg19_v1_chr1_-_247171329_247171334	0.0783399	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg19_v1_chr15_-_91565685_91565855	0.0779975	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg19_v1_chr1_+_181452685_181452715	0.0779763	SOX2.p2	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v1_chr9_+_15422875_15422949	0.0777595	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr9_-_80646150_80646218	0.0777111	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v1_chr2_-_172750724_172750843	0.0772878	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr2_-_106810781_106810830	0.0772622	SOX2.p2	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr11_-_59383179_59383242	0.0771446	SOX2.p2	BC011581|OSBP|5007|oxysterol binding protein
hg19_v1_chr11_-_134281725_134281917	0.0770937	SOX2.p2	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v1_chr5_-_157079087_157079170	0.0770878	SOX2.p2	
hg19_v1_chr1_+_155293727_155293727	0.0768649	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr2_+_75059781_75059781	0.0767994	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg19_v1_chr18_+_76829410_76829489	0.0765836	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg19_v1_chr5_-_137090049_137090095	0.0765351	SOX2.p2	
hg19_v1_chr9_+_132597728_132597802	0.076496	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr8_-_105601234_105601261	0.0764777	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr16_+_88636841_88636897	0.0759215	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr2_+_231729701_231729743	0.0756059	SOX2.p2	AY049777|ITM2C|81618|integral membrane protein 2C	EU831609|ITM2C|81618|integral membrane protein 2C	EU831632|ITM2C|81618|integral membrane protein 2C	EU831696|ITM2C|81618|integral membrane protein 2C	EU832488|ITM2C|81618|integral membrane protein 2C	EU832568|ITM2C|81618|integral membrane protein 2C	AB003629|ITM2C|81618|integral membrane protein 2C	CR457208|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr5_+_61874561_61874716	0.075452	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg19_v1_chr11_-_65326129_65326252	0.0746198	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr8_-_38325241_38325362	0.0745774	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr12_+_120907599_120907691	0.0745591	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr16_+_58498216_58498308	0.0745418	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr3_-_52312257_52312524	0.0745068	SOX2.p2	AY358264|WDR82|80335|WD repeat domain 82	BX648628|WDR82|80335|WD repeat domain 82	AK291380|WDR82|80335|WD repeat domain 82
hg19_v1_chr12_-_11286842_11286842	0.0743271	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg19_v1_chr12_-_48152860_48152888	0.0742909	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr8_+_110346549_110346637	0.0742135	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg19_v1_chr10_-_90750955_90751146	0.0739478	SOX2.p2	AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chrX_-_65858882_65858891	0.0738603	SOX2.p2	BC034919|EDA2R|60401|ectodysplasin A2 receptor	AK296264|EDA2R|60401|ectodysplasin A2 receptor	AK299018|EDA2R|60401|ectodysplasin A2 receptor	NM_021783|EDA2R|60401|ectodysplasin A2 receptor
hg19_v1_chr2_+_103353341_103353423	0.0738252	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg19_v1_chr16_+_31191430_31191457	0.0737244	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma
hg19_v1_chr15_+_40886442_40886486	0.0734567	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr4_+_8951476_8951476	0.073334	SOX2.p2	NM_001040071|LOC650293|650293|seven transmembrane helix receptor
hg19_v1_chr8_-_72274466_72274485	0.0731965	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr7_+_143806606_143806675	0.0730377	SOX2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg19_v1_chr2_+_241375030_241375131	0.0729906	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg19_v1_chrX_-_117250624_117250827	0.072934	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr19_-_58609606_58609729	0.0726322	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr7_+_43152196_43152257	0.0725561	SOX2.p2	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v1_chr2_-_100721792_100722044	0.0724806	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr1_-_212588073_212588234	0.0723675	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg19_v1_chr5_+_34656595_34656599	0.0723103	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chrX_-_15288588_15288588	0.0722497	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg19_v1_chr7_+_129008044_129008133	0.0721154	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr11_-_71752099_71752188	0.0719918	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr1_+_112938857_112938880	0.070966	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|uncharacterized LOC100129406
hg19_v1_chr8_+_133787611_133787673	0.0709468	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr7_+_93535819_93535819	0.0709054	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v1_chr14_-_74892804_74892804	0.0705464	SOX2.p2	NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like
hg19_v1_chr10_-_88730928_88731067	0.0705434	SOX2.p2	AK128041|LOC100133190|100133190|uncharacterized LOC100133190
hg19_v1_chr7_+_44788175_44788190	0.0703406	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr3_-_45267620_45267797	0.0703095	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr5_-_36876730_36876797	0.0700617	SOX2.p2	AK000901|LOC646719|646719|uncharacterized LOC646719
hg19_v1_chr16_-_75300678_75300706	0.0700372	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr3_-_194354304_194354423	0.0699846	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg19_v1_chr8_-_110661007_110661131	0.0695166	SOX2.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr13_-_36944289_36944316	0.0694088	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr18_+_32820987_32821106	0.0693655	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397
hg19_v1_chr3_-_47933997_47934064	0.0693236	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg19_v1_chrX_-_16888442_16888460	0.0692749	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr21_-_35014013_35014159	0.069263	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chr20_-_3996035_3996295	0.0690812	SOX2.p2	AL096778|RNF24|11237|ring finger protein 24	NM_007219|RNF24|11237|ring finger protein 24	BC039584|RNF24|11237|ring finger protein 24	BC000213|RNF24|11237|ring finger protein 24	NM_001134337|RNF24|11237|ring finger protein 24	NM_001134338|RNF24|11237|ring finger protein 24
hg19_v1_chr1_-_154840460_154840542	0.0687516	SOX2.p2	
hg19_v1_chr5_+_140792507_140792742	0.0682592	SOX2.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chr17_+_72581056_72581056	0.0678955	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg19_v1_chr13_-_101327027_101327085	0.0676444	SOX2.p2	AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4
hg19_v1_chr2_-_110873638_110873650	0.0674945	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr1_-_145610869_145610904	0.067359	SOX2.p2	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chrX_+_99839789_99840014	0.0672747	SOX2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg19_v1_chr6_+_26156552_26156557	0.0671142	SOX2.p2	AK313681|HIST1H1E|3008|histone cluster 1, H1e
hg19_v1_chr5_+_86564044_86564089	0.0668919	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chrX_+_24712063_24712067	0.0668543	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v1_chr5_+_175792444_175792534	0.0667015	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg19_v1_chr12_-_498428_498776	0.0665881	SOX2.p2	AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A	AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A	AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A	BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A	BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A	NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A	BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A
hg19_v1_chr3_+_10068097_10068121	0.0660098	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr17_-_39092714_39093086	0.0658353	SOX2.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr17_+_37321318_37321325	0.0658119	SOX2.p2	AK093715|LOC284108|284108|uncharacterized LOC284108
hg19_v1_chr20_-_37063914_37064031	0.0657945	SOX2.p2	BC012894|LOC388796|388796|uncharacterized LOC388796	BC052370|LOC388796|388796|uncharacterized LOC388796	BC032119|LOC388796|388796|uncharacterized LOC388796	BX640887|LOC388796|388796|uncharacterized LOC388796
hg19_v1_chr3_+_89156673_89156770	0.0657288	SOX2.p2	AF213459|EPHA3|2042|EPH receptor A3	NM_005233|EPHA3|2042|EPH receptor A3	NM_182644|EPHA3|2042|EPH receptor A3	BC063282|EPHA3|2042|EPH receptor A3
hg19_v1_chr5_-_88178964_88179049	0.0657197	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr17_+_42786060_42786065	0.0655962	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr6_+_148664124_148664259	0.0654197	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr15_-_79103571_79103930	0.0652555	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg19_v1_chr15_-_73925555_73925617	0.06498	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr1_-_161102457_161102477	0.0646799	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg19_v1_chr1_-_158656487_158656505	0.0646231	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg19_v1_chr4_+_183065111_183065139	0.064559	SOX2.p2	AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)
hg19_v1_chr7_+_148036528_148036603	0.064437	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2
hg19_v1_chr14_-_69354900_69354979	0.0639327	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg19_v1_chr2_+_68694669_68694860	0.0639208	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg19_v1_chr11_-_27723061_27723179	0.0638139	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr11_-_66445218_66445305	0.0635461	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr17_-_16472463_16472529	0.0633788	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg19_v1_chr12_+_133707212_133707213	0.0632692	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg19_v1_chr6_-_28186663_28186890	0.0632204	SOX2.p2	AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1	BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1	BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1	BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1
hg19_v1_chr13_+_111767586_111767873	0.0632113	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr15_-_49338496_49338777	0.0630776	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg19_v1_chr1_+_22328148_22328166	0.0630681	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg19_v1_chrX_-_153599581_153599650	0.0627872	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg19_v1_chr19_+_40854529_40854652	0.0627245	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr12_-_59314297_59314307	0.062488	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v1_chrY_+_1683940_1684067	0.0623654	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr5_-_82373253_82373271	0.0622587	SOX2.p2	NM_174909|TMEM167A|153339|transmembrane protein 167A
hg19_v1_chrX_+_51636608_51636798	0.0620107	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg19_v1_chr2_+_204192915_204193355	0.0616157	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg19_v1_chr1_+_242012032_242012139	0.0615321	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr9_-_94711095_94711161	0.0614007	SOX2.p2	BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2
hg19_v1_chr18_+_61370193_61370193	0.0613265	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg19_v1_chr5_+_40909558_40909606	0.0613236	SOX2.p2	AK290349|C7|730|complement component 7	Y11720|C7|730|complement component 7	NM_000587|C7|730|complement component 7	BC065305|C7|730|complement component 7	BC041807|C7|730|complement component 7
hg19_v1_chr10_-_119805673_119806415	0.0612048	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr21_-_32410794_32410794	0.0610944	SOX2.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg19_v1_chr12_-_26277807_26278036	0.0606913	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr16_-_75467249_75467402	0.0604477	SOX2.p2	BT009819|CFDP1|10428|craniofacial development protein 1	CR542111|CFDP1|10428|craniofacial development protein 1	DQ890998|CFDP1|10428|craniofacial development protein 1	EU176574|CFDP1|10428|craniofacial development protein 1	AK313948|CFDP1|10428|craniofacial development protein 1	AB009285|CFDP1|10428|craniofacial development protein 1	D85939|CFDP1|10428|craniofacial development protein 1	BC000991|CFDP1|10428|craniofacial development protein 1	NM_006324|CFDP1|10428|craniofacial development protein 1	AK226031|CFDP1|10428|craniofacial development protein 1
hg19_v1_chr11_-_63684315_63684315	0.0602663	SOX2.p2	BC023587|RCOR2|283248|REST corepressor 2	NM_173587|RCOR2|283248|REST corepressor 2
hg19_v1_chr5_-_43313492_43313571	0.060115	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr6_+_25279651_25279666	0.0600535	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr7_-_42276793_42276797	0.0596013	SOX2.p2	AK308429|GLI3|2737|GLI family zinc finger 3
hg19_v1_chr7_+_107110501_107110504	0.0595863	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chr1_+_39547088_39547088	0.0595634	SOX2.p2	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1	NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1
hg19_v1_chr1_-_151689246_151689292	0.0595373	SOX2.p2	BC004145|CELF3|11189|CUGBP, Elav-like family member 3	BC052491|CELF3|11189|CUGBP, Elav-like family member 3	AY165003|CELF3|11189|CUGBP, Elav-like family member 3	NM_007185|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr1_-_247171302_247171323	0.0594758	SOX2.p2	BC023527|ZNF695|57116|zinc finger protein 695
hg19_v1_chr4_+_188916924_188916924	0.0592957	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg19_v1_chr3_-_182880432_182880447	0.0592714	SOX2.p2	DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr19_+_20011700_20011869	0.0591453	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chr2_-_110873353_110873457	0.0591012	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr22_+_42394728_42394822	0.0591006	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg19_v1_chr6_+_149068148_149068270	0.0589897	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg19_v1_chr3_-_50336662_50336902	0.0588565	SOX2.p2	AF502909|HYAL3|8372|hyaluronoglucosaminidase 3	AF502910|HYAL3|8372|hyaluronoglucosaminidase 3	AF502911|HYAL3|8372|hyaluronoglucosaminidase 3	AF502912|HYAL3|8372|hyaluronoglucosaminidase 3	BC004483|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	BC005896|HYAL3|8372|hyaluronoglucosaminidase 3	BC035689|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313455|HYAL3|8372|hyaluronoglucosaminidase 3	AF040710|HYAL3|8372|hyaluronoglucosaminidase 3	BC051750|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313803|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_001200016|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_012191|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AF036035|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200030|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200031|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200032|HYAL3|8372|hyaluronoglucosaminidase 3	NM_003549|HYAL3|8372|hyaluronoglucosaminidase 3
hg19_v1_chr21_-_27543445_27543445	0.0587425	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr11_+_4470524_4470524	0.0586573	SOX2.p2	BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2	BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2	NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2
hg19_v1_chr21_+_27107731_27107801	0.0582758	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr4_-_84376943_84377024	0.0582509	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg19_v1_chrY_-_26194115_26194182	0.0582082	SOX2.p2	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1	AF080597|CDY1|9085|chromodomain protein, Y-linked, 1	AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B	BC033041|CDY1|9085|chromodomain protein, Y-linked, 1	NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1	NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1
hg19_v1_chr4_+_30722445_30722474	0.0580888	SOX2.p2	AB006756|PCDH7|5099|protocadherin 7
hg19_v1_chr19_-_58662144_58662153	0.0580183	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg19_v1_chr22_-_22089975_22090122	0.0580168	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg19_v1_chr20_+_58179601_58179708	0.0578997	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg19_v1_chr7_+_2598611_2598644	0.0577515	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg19_v1_chr5_+_149569519_149569650	0.0575774	SOX2.p2	AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
hg19_v1_chrX_-_20159757_20159995	0.05749	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg19_v1_chr2_-_113594325_113594364	0.0574832	SOX2.p2	X56087|IL1B|3553|interleukin 1, beta	X02532|IL1B|3553|interleukin 1, beta	K02770|IL1B|3553|interleukin 1, beta	M54933|IL1B|3553|interleukin 1, beta	AK313983|IL1B|3553|interleukin 1, beta	BC008678|IL1B|3553|interleukin 1, beta	M15330|IL1B|3553|interleukin 1, beta	NM_000576|IL1B|3553|interleukin 1, beta
hg19_v1_chr6_-_108279307_108279318	0.0573427	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr12_-_11244828_11244911	0.0568025	SOX2.p2	HQ258369|TAS2R31|259290|taste receptor, type 2, member 31	BC117423|TAS2R43|259289|taste receptor, type 2, member 43	NM_176884|TAS2R43|259289|taste receptor, type 2, member 43
hg19_v1_chr11_-_17498322_17498365	0.0567627	SOX2.p2	U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr10_+_12391728_12391827	0.0567239	SOX2.p2	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg19_v1_chr12_-_102455793_102455930	0.0567188	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr8_+_65492794_65492923	0.0567163	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg19_v1_chr12_-_25055228_25055321	0.0566757	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr6_-_32119667_32119699	0.0565475	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr3_-_124842442_124842468	0.0563052	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr9_+_15422862_15422874	0.0556386	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr2_-_127977653_127977781	0.0556065	SOX2.p2	AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v1_chr11_-_118661826_118661847	0.0552979	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr6_-_3227776_3227967	0.0550386	SOX2.p2	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb	CR456788|TUBB2B|347733|tubulin, beta 2B class IIb	BC063610|TUBB2B|347733|tubulin, beta 2B class IIb	AK308806|TUBB2B|347733|tubulin, beta 2B class IIb	AK289433|TUBB2B|347733|tubulin, beta 2B class IIb	AK297568|TUBB2B|347733|tubulin, beta 2B class IIb	BC001352|TUBB2B|347733|tubulin, beta 2B class IIb	NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb
hg19_v1_chr19_+_9938587_9938639	0.0547553	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg19_v1_chr9_-_116102533_116102619	0.0547268	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg19_v1_chr2_-_74607425_74607481	0.0545054	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg19_v1_chr1_+_29138653_29138653	0.0544918	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg19_v1_chr11_-_115375065_115375296	0.0542229	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr15_-_43594452_43594452	0.0541755	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg19_v1_chr8_-_72756384_72756494	0.0538551	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg19_v1_chr7_+_100209724_100209815	0.0534358	SOX2.p2	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr1_+_6684924_6684924	0.0532157	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr20_-_1165116_1165116	0.0529442	SOX2.p2	AK002052|TMEM74B|55321|transmembrane protein 74B	NM_018354|TMEM74B|55321|transmembrane protein 74B
hg19_v1_chr1_-_182357871_182357935	0.0529216	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr19_-_20844312_20844412	0.0528583	SOX2.p2	AK096221|ZNF626|199777|zinc finger protein 626	CR749233|ZNF626|199777|zinc finger protein 626	BC007116|ZNF626|199777|zinc finger protein 626	BX648764|ZNF626|199777|zinc finger protein 626	BC107803|ZNF626|199777|zinc finger protein 626	NM_001076675|ZNF626|199777|zinc finger protein 626	NM_145297|ZNF626|199777|zinc finger protein 626
hg19_v1_chr6_+_88299784_88299891	0.052829	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg19_v1_chr16_-_29937539_29937570	0.0526996	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr4_-_17806820_17806917	0.0525315	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg19_v1_chr7_+_27779743_27779807	0.0525076	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chrX_+_108780235_108780474	0.0522386	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr1_-_204165542_204165620	0.0520851	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor
hg19_v1_chr7_+_2598676_2598703	0.051897	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg19_v1_chr12_-_6961044_6961229	0.051861	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr6_+_42982013_42982022	0.0518547	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr13_-_36920777_36920939	0.0518374	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr12_-_21810754_21810766	0.0518065	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr19_+_18794391_18794458	0.0515443	SOX2.p2	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr7_+_27779809_27779809	0.0515238	SOX2.p2	
hg19_v1_chr14_+_73603160_73603161	0.0514719	SOX2.p2	BC011729|PSEN1|5663|presenilin 1
hg19_v1_chr17_+_44101549_44101592	0.051424	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr10_-_120514277_120514298	0.051202	SOX2.p2	
hg19_v1_chr17_+_59477473_59477519	0.0511803	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr11_+_120973374_120973374	0.0511752	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg19_v1_chr12_+_22199219_22199239	0.0511148	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr11_-_17498419_17498454	0.0509873	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr19_-_18548788_18548965	0.0508938	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr19_-_53238290_53238306	0.0508704	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg19_v1_chr3_-_10149763_10149914	0.0506854	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg19_v1_chr3_-_13057130_13057306	0.0506666	SOX2.p2	
hg19_v1_chr6_-_105627857_105627857	0.0505465	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr7_-_6388408_6388613	0.0503229	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg19_v1_chr2_+_37311593_37311702	0.0500236	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg19_v1_chr3_+_157827937_157827944	0.0500165	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr4_+_175204827_175204894	0.0499936	SOX2.p2	NM_001040157|CEP44|80817|centrosomal protein 44kDa
hg19_v1_chr7_-_8301767_8301815	0.0499588	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr1_+_40943301_40943301	0.0498773	SOX2.p2	AK122618|ZNF642|339559|zinc finger protein 642	NM_198494|ZNF642|339559|zinc finger protein 642
hg19_v1_chrX_+_150863729_150863729	0.0498444	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg19_v1_chr19_-_14629227_14629233	0.0497005	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr5_+_132009372_132009372	0.0496324	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg19_v1_chr12_+_510740_510822	0.0493966	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr12_-_10955168_10955225	0.0492866	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg19_v1_chr7_+_99699129_99699488	0.0491559	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg19_v1_chr17_+_37896219_37896219	0.0491072	SOX2.p2	AK290115|GRB7|2886|growth factor receptor-bound protein 7	NM_001242443|GRB7|2886|growth factor receptor-bound protein 7
hg19_v1_chr17_+_57697403_57697488	0.0489215	SOX2.p2	
hg19_v1_chr6_-_33168448_33168450	0.0487581	SOX2.p2	AK300402|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr12_+_72057676_72057936	0.0484515	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr10_+_12391708_12391726	0.0480469	SOX2.p2	BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg19_v1_chr12_-_49582296_49582473	0.0477048	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr16_-_28074776_28074829	0.0474526	SOX2.p2	AY358206|GSG1L|146395|GSG1-like	NM_001109763|GSG1L|146395|GSG1-like
hg19_v1_chr4_+_42895281_42895282	0.0472823	SOX2.p2	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1
hg19_v1_chr5_+_52284903_52285337	0.0471265	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr6_+_42981986_42981992	0.0466165	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr2_+_170590454_170590521	0.0462798	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr4_-_15939949_15939972	0.0461615	SOX2.p2	BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1	M60047|FGFBP1|9982|fibroblast growth factor binding protein 1	BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1	BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1	AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1
hg19_v1_chr15_-_77472659_77472798	0.0461318	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg19_v1_chr6_-_47277246_47277283	0.0460366	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr16_+_29086269_29086342	0.0458797	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg19_v1_chr19_+_52074530_52074564	0.0458023	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg19_v1_chr2_-_228497801_228498035	0.0456279	SOX2.p2	AM393148|C2orf83|56918|chromosome 2 open reading frame 83	AM393273|C2orf83|56918|chromosome 2 open reading frame 83	BC131618|C2orf83|56918|chromosome 2 open reading frame 83	AL359944|C2orf83|56918|chromosome 2 open reading frame 83	CR749679|C2orf83|56918|chromosome 2 open reading frame 83	AK055355|C2orf83|56918|chromosome 2 open reading frame 83	NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83	NM_020161|C2orf83|56918|chromosome 2 open reading frame 83
hg19_v1_chr8_-_18871095_18871130	0.0456236	SOX2.p2	GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr19_-_50354906_50354968	0.0455977	SOX2.p2	BC043359|LOC100506033|100506033|uncharacterized LOC100506033
hg19_v1_chr1_-_21503304_21503344	0.0454978	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr9_-_127533397_127533624	0.0453945	SOX2.p2	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1
hg19_v1_chr3_+_66444896_66445023	0.0451531	SOX2.p2	
hg19_v1_chr1_-_205719309_205719316	0.0449917	SOX2.p2	
hg19_v1_chr12_-_21810733_21810752	0.0449878	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr1_-_52344433_52344608	0.0449176	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr7_+_27779810_27779828	0.0445355	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr17_+_42148097_42148302	0.0445074	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg19_v1_chr5_-_137090033_137090036	0.0444525	SOX2.p2	BC018800|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr5_-_60458146_60458210	0.0444401	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr1_-_224033603_224033644	0.0443535	SOX2.p2	BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2	AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2	U58334|TP53BP2|7159|tumor protein p53 binding protein, 2	BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2
hg19_v1_chr12_-_112630525_112630531	0.0443388	SOX2.p2	AF174498|C12orf51|283450|chromosome 12 open reading frame 51
hg19_v1_chr9_+_6413321_6413490	0.0442507	SOX2.p2	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg19_v1_chr18_-_13915534_13915538	0.0441865	SOX2.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v1_chr11_+_114271372_114271432	0.0441521	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr1_+_26737306_26737381	0.0440207	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg19_v1_chr2_-_157189040_157189286	0.043851	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg19_v1_chr4_-_44728518_44728611	0.0438392	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg19_v1_chrY_-_19992072_19992099	0.0437229	SOX2.p2	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr7_+_18548899_18548948	0.0435299	SOX2.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr3_+_109128836_109128836	0.0434586	SOX2.p2	AK058092|FLJ25363|401082|uncharacterized LOC401082	NM_001145553|FLJ25363|401082|uncharacterized LOC401082
hg19_v1_chr20_-_61884663_61884804	0.0434403	SOX2.p2	AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4
hg19_v1_chr14_-_54955714_54955796	0.0432549	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr2_+_170590241_170590430	0.0430196	SOX2.p2	NM_144711|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr1_-_26232643_26232643	0.0429472	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr6_-_30028755_30028971	0.0428969	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BC067890|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg19_v1_chr15_+_101459459_101459566	0.0428726	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg19_v1_chr21_-_40685418_40685526	0.0428038	SOX2.p2	BC140079|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292465|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292466|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080586|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080587|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ238214|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr11_+_111808017_111808150	0.0425191	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr16_+_1203240_1203412	0.0424699	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr8_+_126010719_126010747	0.0422976	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg19_v1_chr12_+_120933911_120933915	0.0422814	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr19_-_19626237_19626493	0.0422584	SOX2.p2	DQ891603|TSSK6|83983|testis-specific serine kinase 6	DQ894797|TSSK6|83983|testis-specific serine kinase 6	AF329483|TSSK6|83983|testis-specific serine kinase 6	AK058166|TSSK6|83983|testis-specific serine kinase 6	AK313767|TSSK6|83983|testis-specific serine kinase 6	BC014611|TSSK6|83983|testis-specific serine kinase 6	NM_032037|TSSK6|83983|testis-specific serine kinase 6	AF348077|TSSK6|83983|testis-specific serine kinase 6
hg19_v1_chr19_+_21324826_21324887	0.0421235	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr8_+_12803150_12803182	0.0421099	SOX2.p2	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg19_v1_chr2_-_38830014_38830067	0.0418097	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr7_+_11013453_11013567	0.0416598	SOX2.p2	AK294419|PHF14|9678|PHD finger protein 14	NM_014660|PHF14|9678|PHD finger protein 14	AK295461|PHF14|9678|PHD finger protein 14	AB018326|PHF14|9678|PHD finger protein 14	BC152414|PHF14|9678|PHD finger protein 14
hg19_v1_chr9_-_139658959_139658964	0.0416412	SOX2.p2	BC093893|LCN15|389812|lipocalin 15	BC093895|LCN15|389812|lipocalin 15	AY358618|LCN15|389812|lipocalin 15	NM_203347|LCN15|389812|lipocalin 15
hg19_v1_chr3_-_165555252_165555283	0.0415624	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr12_-_21810720_21810732	0.0412289	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr1_-_226186987_226187017	0.0410802	SOX2.p2	BC016290|C1orf55|163859|chromosome 1 open reading frame 55
hg19_v1_chr2_-_106810756_106810760	0.0410566	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr12_+_109490339_109490510	0.0410407	SOX2.p2	NM_032663|USP30|84749|ubiquitin specific peptidase 30	BC004868|USP30|84749|ubiquitin specific peptidase 30	AJ586136|USP30|84749|ubiquitin specific peptidase 30	DQ893401|USP30|84749|ubiquitin specific peptidase 30	DQ896783|USP30|84749|ubiquitin specific peptidase 30
hg19_v1_chr11_-_82997376_82997434	0.0407419	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg19_v1_chr20_-_35492069_35492200	0.0405539	SOX2.p2	NM_080627|KIAA0889|140710|KIAA0889
hg19_v1_chr4_+_1902352_1902381	0.0405483	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr12_-_21810769_21810778	0.0405198	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr11_-_116658701_116658729	0.0404911	SOX2.p2	AK301227|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg19_v1_chr1_-_85741992_85742279	0.0404587	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr11_+_65819803_65819877	0.040352	SOX2.p2	NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa
hg19_v1_chr8_+_68864723_68864738	0.0400652	SOX2.p2	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr12_-_498256_498425	0.0397795	SOX2.p2	AK225060|KDM5A|5927|lysine (K)-specific demethylase 5A	BC110916|KDM5A|5927|lysine (K)-specific demethylase 5A	S66431|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307580|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307689|KDM5A|5927|lysine (K)-specific demethylase 5A
hg19_v1_chr11_-_62369097_62369177	0.039746	SOX2.p2	BC023656|MTA2|9219|metastasis associated 1 family, member 2	BC053650|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr5_-_43313581_43313612	0.0395079	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr17_-_31204071_31204176	0.0394783	SOX2.p2	AK127942|MYO1D|4642|myosin ID
hg19_v1_chr1_+_13742801_13742801	0.0394743	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg19_v1_chr9_+_103191795_103191795	0.0393854	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr2_+_61293038_61293118	0.0393854	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg19_v1_chr2_+_190648810_190648810	0.0393583	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr7_-_42276617_42276617	0.0393242	SOX2.p2	NM_000168|GLI3|2737|GLI family zinc finger 3
hg19_v1_chr13_-_22033310_22033470	0.0393152	SOX2.p2	BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20	BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20
hg19_v1_chr19_+_4007690_4007768	0.039187	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg19_v1_chr1_+_118472364_118472393	0.0390903	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg19_v1_chr6_+_116832807_116832835	0.0388081	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg19_v1_chrX_+_77166223_77166262	0.0387434	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr7_-_150721551_150721585	0.0386491	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg19_v1_chr1_+_61542790_61542922	0.0385925	SOX2.p2	
hg19_v1_chr7_-_27192201_27192216	0.03856	SOX2.p2	
hg19_v1_chr3_+_75713480_75713486	0.0383587	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg19_v1_chr7_+_139025104_139025240	0.0383197	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg19_v1_chr22_+_39493228_39493312	0.0382591	SOX2.p2	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
hg19_v1_chr20_+_35974458_35974556	0.0382035	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg19_v1_chr3_-_10547221_10547245	0.0379463	SOX2.p2	M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr8_-_72756607_72756650	0.0376982	SOX2.p2	AF060154|MSC|9242|musculin
hg19_v1_chr3_+_135741576_135741660	0.0376756	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr15_+_65914269_65914269	0.0374388	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg19_v1_chr6_+_42981975_42981984	0.0374178	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr15_-_73925658_73925795	0.0373793	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chr11_+_1651004_1651032	0.0373452	SOX2.p2	AB126074|KRTAP5-5|439915|keratin associated protein 5-5	AJ628247|KRTAP5-5|439915|keratin associated protein 5-5	NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5
hg19_v1_chr3_+_155588447_155588463	0.0373252	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chrX_+_69353764_69353797	0.0370697	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg19_v1_chr4_-_144826659_144826715	0.03706	SOX2.p2	EU176664|GYPE|2996|glycophorin E (MNS blood group)	BC064396|GYPE|2996|glycophorin E (MNS blood group)	BC017864|GYPE|2996|glycophorin E (MNS blood group)	M29610|GYPE|2996|glycophorin E (MNS blood group)	NM_002102|GYPE|2996|glycophorin E (MNS blood group)	NM_198682|GYPE|2996|glycophorin E (MNS blood group)
hg19_v1_chr19_+_10654591_10654765	0.0370335	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg19_v1_chrY_+_20297334_20297462	0.0366618	SOX2.p2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2
hg19_v1_chr17_-_56595192_56595294	0.036248	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr1_+_170501240_170501366	0.0361924	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg19_v1_chr7_-_122839999_122840024	0.0361819	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr2_-_203776948_203776948	0.0361324	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chr2_+_190649109_190649291	0.0360741	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr8_+_99956630_99956685	0.0359161	SOX2.p2	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)	NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)	AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)	AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)	AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)	BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)	AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)
hg19_v1_chr17_+_38375554_38375674	0.035909	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg19_v1_chr7_-_27187367_27187392	0.0358964	SOX2.p2	BC069497|HOXA6|3203|homeobox A6	BC104915|HOXA6|3203|homeobox A6	BC104917|HOXA6|3203|homeobox A6	NM_024014|HOXA6|3203|homeobox A6
hg19_v1_chr5_-_77805930_77806179	0.0357763	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr22_-_31688329_31688519	0.03574	SOX2.p2	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg19_v1_chr5_+_99871023_99871123	0.0350585	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr8_-_65711104_65711455	0.0345766	SOX2.p2	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1
hg19_v1_chr11_-_59383167_59383172	0.0342709	SOX2.p2	BC051350|OSBP|5007|oxysterol binding protein	BC063121|OSBP|5007|oxysterol binding protein
hg19_v1_chr9_+_2622134_2622188	0.0342572	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr7_+_100209941_100210203	0.034242	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr2_+_37571752_37571874	0.0342275	SOX2.p2	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase
hg19_v1_chr2_-_128615673_128615690	0.0341431	SOX2.p2	
hg19_v1_chr9_-_139292888_139292888	0.0341038	SOX2.p2	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa
hg19_v1_chr4_-_120549115_120549238	0.0340982	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr2_+_48757292_48757358	0.0340931	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg19_v1_chr2_+_17935379_17935443	0.0339193	SOX2.p2	CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)
hg19_v1_chr3_-_128712918_128712985	0.03389	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg19_v1_chr14_-_50583194_50583347	0.0338731	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg19_v1_chr1_+_112938799_112938853	0.0338428	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg19_v1_chr3_+_184056304_184056421	0.0337745	SOX2.p2	BC026221|FAM131A|131408|family with sequence similarity 131, member A
hg19_v1_chr19_-_51568323_51568367	0.0337672	SOX2.p2	AB108823|KLK13|26085|kallikrein-related peptidase 13	AB108824|KLK13|26085|kallikrein-related peptidase 13	AB451465|KLK13|26085|kallikrein-related peptidase 13	AY923171|KLK13|26085|kallikrein-related peptidase 13	AY923172|KLK13|26085|kallikrein-related peptidase 13	AY923173|KLK13|26085|kallikrein-related peptidase 13	BC069334|KLK13|26085|kallikrein-related peptidase 13	BC069543|KLK13|26085|kallikrein-related peptidase 13	NM_015596|KLK13|26085|kallikrein-related peptidase 13	AL050220|KLK13|26085|kallikrein-related peptidase 13
hg19_v1_chr14_-_61115906_61116274	0.0337652	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr1_-_151431648_151431704	0.0337615	SOX2.p2	BX649163|POGZ|23126|pogo transposable element with ZNF domain	AB037911|POGZ|23126|pogo transposable element with ZNF domain	AB075477|POGZ|23126|pogo transposable element with ZNF domain	AK000199|POGZ|23126|pogo transposable element with ZNF domain	AK300307|POGZ|23126|pogo transposable element with ZNF domain	BC057773|POGZ|23126|pogo transposable element with ZNF domain	BX537561|POGZ|23126|pogo transposable element with ZNF domain	AK299791|POGZ|23126|pogo transposable element with ZNF domain	AK302501|POGZ|23126|pogo transposable element with ZNF domain
hg19_v1_chr3_-_150690785_150690785	0.033731	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg19_v1_chr14_+_100259445_100259963	0.0335848	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg19_v1_chr5_-_140700286_140700333	0.0335145	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr3_+_159557745_159557973	0.0335131	SOX2.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr11_+_82783118_82783119	0.0332789	SOX2.p2	BC031316|LOC100506233|100506233|uncharacterized LOC100506233
hg19_v1_chr1_-_145610934_145610937	0.0332287	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr1_+_61924621_61924764	0.0332115	SOX2.p2	AK096483|NFIA|4774|nuclear factor I/A
hg19_v1_chr6_-_157745183_157745252	0.0328525	SOX2.p2	NM_018452|TMEM242|729515|transmembrane protein 242
hg19_v1_chr17_+_35767311_35767311	0.0328263	SOX2.p2	AK022767|TADA2A|6871|transcriptional adaptor 2A	NM_001488|TADA2A|6871|transcriptional adaptor 2A	NM_133439|TADA2A|6871|transcriptional adaptor 2A
hg19_v1_chr5_+_99871234_99871306	0.0325848	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr5_+_172483285_172483483	0.0324964	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg19_v1_chr16_-_30621628_30621684	0.032471	SOX2.p2	AK310459|ZNF689|115509|zinc finger protein 689	AB065282|ZNF689|115509|zinc finger protein 689	BC014000|ZNF689|115509|zinc finger protein 689	NM_138447|ZNF689|115509|zinc finger protein 689
hg19_v1_chr6_-_53013581_53013626	0.0324399	SOX2.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg19_v1_chr13_-_36920603_36920645	0.0323678	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr9_-_21994379_21994399	0.0323016	SOX2.p2	BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg19_v1_chr18_+_55862577_55862884	0.0322347	SOX2.p2	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr2_-_47403613_47403639	0.0322276	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr6_+_42982002_42982011	0.0322176	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr19_-_1652327_1652352	0.03219	SOX2.p2	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg19_v1_chr16_-_29937354_29937518	0.0321614	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr9_-_15510899_15511022	0.0319458	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg19_v1_chr10_-_102045948_102046113	0.0318676	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v1_chr3_-_114866090_114866139	0.0317764	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr19_-_58609574_58609587	0.031756	SOX2.p2	AY279352|ZSCAN18|65982|zinc finger and SCAN domain containing 18	BC022846|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AK225548|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr17_-_2304217_2304415	0.031443	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr3_-_126327397_126327397	0.0313135	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr1_-_17764989_17765032	0.0312941	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chrX_+_122993536_122994348	0.0312922	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	NM_001204401|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg19_v1_chr2_+_102314162_102314542	0.0312728	SOX2.p2	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr11_-_67442086_67442176	0.0311184	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg19_v1_chr6_-_33385662_33385709	0.0311119	SOX2.p2	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg19_v1_chr17_+_17608163_17608234	0.0310946	SOX2.p2	
hg19_v1_chr18_-_33709204_33709379	0.0308055	SOX2.p2	U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6
hg19_v1_chr17_+_42264573_42264581	0.0305816	SOX2.p2	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr4_+_184827882_184827940	0.0305205	SOX2.p2	
hg19_v1_chr6_+_26020677_26020717	0.0303658	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg19_v1_chr3_-_196911001_196911001	0.03028	SOX2.p2	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)
hg19_v1_chr6_-_32119717_32119723	0.0302566	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr11_+_5009420_5009439	0.0300921	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg19_v1_chr15_+_38746303_38746387	0.0300442	SOX2.p2	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B	NM_173611|FAM98B|283742|family with sequence similarity 98, member B	AK095745|FAM98B|283742|family with sequence similarity 98, member B	BC093898|FAM98B|283742|family with sequence similarity 98, member B
hg19_v1_chr6_-_79787899_79787937	0.02995	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr1_+_104292439_104292565	0.0296932	SOX2.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	AK313275|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr3_-_93781659_93781830	0.0296337	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr6_-_52710892_52710892	0.0296085	SOX2.p2	NM_153699|GSTA5|221357|glutathione S-transferase alpha 5
hg19_v1_chr6_+_42982027_42982066	0.0294892	SOX2.p2	BC001793|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr11_+_118992232_118992335	0.0294799	SOX2.p2	NM_001243259|HINFP|25988|histone H4 transcription factor	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg19_v1_chr3_+_49977582_49977625	0.0294218	SOX2.p2	AK308794|RBM6|10180|RNA binding motif protein 6	AK303371|RBM6|10180|RNA binding motif protein 6	AF091264|RBM6|10180|RNA binding motif protein 6	AK093836|RBM6|10180|RNA binding motif protein 6	AY216800|RBM6|10180|RNA binding motif protein 6	BC030057|RBM6|10180|RNA binding motif protein 6	BC046643|RBM6|10180|RNA binding motif protein 6	AF042857|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr11_-_116658738_116658738	0.0293428	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr11_+_93754377_93754377	0.0292841	SOX2.p2	NM_001098672|HEPHL1|341208|hephaestin-like 1
hg19_v1_chr14_+_55168831_55168947	0.0292652	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg19_v1_chr11_-_45939568_45939673	0.0291185	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg19_v1_chr4_+_52709165_52709408	0.0291106	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg19_v1_chr20_+_21106623_21106706	0.0290851	SOX2.p2	NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1	AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1	BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1	AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1
hg19_v1_chr19_-_44439410_44439459	0.0290649	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg19_v1_chr9_+_35829375_35829581	0.0290543	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr6_+_126070738_126070795	0.0290503	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr7_-_128550761_128550772	0.0290222	SOX2.p2	AK122706|KCP|375616|kielin/chordin-like protein	NM_001135914|KCP|375616|kielin/chordin-like protein	NM_199349|KCP|375616|kielin/chordin-like protein
hg19_v1_chr10_-_73848309_73848372	0.0290104	SOX2.p2	AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr19_-_18548118_18548118	0.0288308	SOX2.p2	AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr3_-_10067989_10068077	0.0288005	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg19_v1_chr6_+_42981955_42981958	0.0286418	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr20_+_30945988_30946353	0.0285311	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg19_v1_chrX_-_74743085_74743152	0.0284545	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr6_-_80580136_80580136	0.0282999	SOX2.p2	NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7
hg19_v1_chr11_-_3013550_3013560	0.0281558	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr19_+_11708234_11708349	0.0278875	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg19_v1_chr4_+_184827805_184827836	0.0275509	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg19_v1_chr19_+_57791794_57791981	0.0274908	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg19_v1_chr2_-_171923482_171923482	0.0274321	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg19_v1_chr3_+_150264514_150264575	0.0272585	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr6_-_79787887_79787890	0.0272546	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr6_-_105307747_105307778	0.0269978	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr6_+_83073954_83074000	0.0268912	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr5_-_150138554_150138656	0.0266905	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg19_v1_chr8_+_68864341_68864363	0.026673	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr1_-_173991506_173991524	0.026603	SOX2.p2	
hg19_v1_chr3_+_155588479_155588659	0.0264812	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr1_+_107599266_107599465	0.0264807	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg19_v1_chr10_-_64576123_64576171	0.0263725	SOX2.p2	NM_000399|EGR2|1959|early growth response 2	NM_001136177|EGR2|1959|early growth response 2	NM_001136179|EGR2|1959|early growth response 2
hg19_v1_chr4_-_186456580_186456711	0.0261808	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg19_v1_chr11_+_114271294_114271368	0.0260206	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr6_-_84140854_84140954	0.0259927	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr19_+_50180408_50180491	0.0259552	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1	NM_001207042|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr19_-_12595625_12595632	0.0258301	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg19_v1_chr22_+_20105068_20105075	0.0258025	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr3_+_134514300_134514302	0.0257245	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg19_v1_chr11_-_5323174_5323175	0.0256984	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg19_v1_chr12_+_104850986_104851188	0.0255323	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v1_chr6_+_83073501_83073565	0.0254698	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr7_-_156802553_156802679	0.0254626	SOX2.p2	X56537|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr2_+_241375235_241375295	0.0254297	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg19_v1_chr14_+_67827060_67827069	0.0253506	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr9_+_124461365_124461648	0.0252009	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chr10_-_14816895_14816895	0.02506	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr10_-_73848278_73848286	0.0249166	SOX2.p2	AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr3_-_25706390_25706397	0.0249021	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg19_v1_chrX_-_74742847_74742865	0.0246834	SOX2.p2	
hg19_v1_chr1_-_52344406_52344424	0.0246118	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr15_+_50647649_50647693	0.0245622	SOX2.p2	BX537481|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr1_+_174417211_174417249	0.0245615	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52	HQ995526|GPR52|9293|G protein-coupled receptor 52
hg19_v1_chr7_+_141408152_141408152	0.0245397	SOX2.p2	AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)	NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)
hg19_v1_chr3_+_187930720_187930720	0.0240842	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr14_-_21852424_21852424	0.0237748	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr19_-_46148606_46148841	0.0237533	SOX2.p2	AK296258|EML2|24139|echinoderm microtubule associated protein like 2	AK294668|EML2|24139|echinoderm microtubule associated protein like 2	NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2	BC029304|EML2|24139|echinoderm microtubule associated protein like 2
hg19_v1_chr12_+_7080081_7080186	0.0237185	SOX2.p2	AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr15_+_98503938_98503964	0.0237125	SOX2.p2	BC028704|ARRDC4|91947|arrestin domain containing 4	BC070100|ARRDC4|91947|arrestin domain containing 4
hg19_v1_chr5_+_140767402_140767451	0.0236906	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg19_v1_chr19_-_6279797_6279809	0.0236572	SOX2.p2	
hg19_v1_chr5_-_60458228_60458306	0.023617	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr2_+_233385172_233385172	0.0235616	SOX2.p2	NM_001195129|PRSS56|646960|protease, serine, 56
hg19_v1_chr6_+_99872769_99872859	0.0233865	SOX2.p2	
hg19_v1_chr7_+_144052432_144052574	0.0233414	SOX2.p2	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr1_-_17765052_17765071	0.0233173	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr15_+_79575145_79575145	0.0232271	SOX2.p2	AK127037|ANKRD34C|390616|ankyrin repeat domain 34C	NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C
hg19_v1_chr20_-_33264888_33264932	0.0232122	SOX2.p2	AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg19_v1_chr8_-_101315457_101315486	0.0232051	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr19_+_2977480_2977652	0.023017	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v1_chrX_-_74742871_74742879	0.0228976	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr1_+_68297985_68297991	0.0228927	SOX2.p2	AK124028|LOC100289178|100289178|uncharacterized LOC100289178
hg19_v1_chr2_-_55277698_55277733	0.022728	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr17_-_67057046_67057135	0.0225906	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr12_+_19282402_19282729	0.0225286	SOX2.p2	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5
hg19_v1_chrX_+_1733940_1734067	0.0224349	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chrX_-_16730669_16731058	0.0223662	SOX2.p2	NM_175859|CTPS2|56474|CTP synthase II	BC034986|CTPS2|56474|CTP synthase II	AK125348|CTPS2|56474|CTP synthase II	AF226667|CTPS2|56474|CTP synthase II	AK024070|CTPS2|56474|CTP synthase II	AK023549|CTPS2|56474|CTP synthase II	NM_019857|CTPS2|56474|CTP synthase II
hg19_v1_chr3_+_9851643_9851643	0.0222906	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg19_v1_chr1_+_74701070_74701135	0.0221602	SOX2.p2	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AF116826|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase	HQ258528|TNNI3K|51086|TNNI3 interacting kinase
hg19_v1_chr5_+_125936606_125936659	0.0220966	SOX2.p2	AK023255|PHAX|51808|phosphorylated adaptor for RNA export	NM_032177|PHAX|51808|phosphorylated adaptor for RNA export	BC021161|PHAX|51808|phosphorylated adaptor for RNA export	AK024065|PHAX|51808|phosphorylated adaptor for RNA export	AK298497|PHAX|51808|phosphorylated adaptor for RNA export	AK225464|PHAX|51808|phosphorylated adaptor for RNA export	CR457305|PHAX|51808|phosphorylated adaptor for RNA export	DQ893213|PHAX|51808|phosphorylated adaptor for RNA export	DQ896542|PHAX|51808|phosphorylated adaptor for RNA export
hg19_v1_chr19_-_11616689_11616754	0.0219273	SOX2.p2	AK131037|ZNF653|115950|zinc finger protein 653	NM_138783|ZNF653|115950|zinc finger protein 653
hg19_v1_chr6_+_33168602_33168725	0.021906	SOX2.p2	NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7
hg19_v1_chr7_+_23530136_23530198	0.0218165	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chrX_+_108780058_108780109	0.0216666	SOX2.p2	NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr19_+_19626535_19626595	0.0215997	SOX2.p2	AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg19_v1_chr4_-_54457723_54457765	0.0215143	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr6_-_47277645_47277645	0.0214075	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr10_+_127408083_127408144	0.021396	SOX2.p2	BC026172|C10orf137|26098|chromosome 10 open reading frame 137	NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137	NM_015608|C10orf137|26098|chromosome 10 open reading frame 137	BC028715|C10orf137|26098|chromosome 10 open reading frame 137	BC105929|C10orf137|26098|chromosome 10 open reading frame 137	BC107479|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr19_+_44488331_44488380	0.021328	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg19_v1_chr16_+_81069316_81069710	0.0212827	SOX2.p2	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg19_v1_chr6_-_13711952_13711996	0.0212381	SOX2.p2	BC052781|RANBP9|10048|RAN binding protein 9
hg19_v1_chr7_+_65216036_65216130	0.0210751	SOX2.p2	BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1	BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1	BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1	BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1
hg19_v1_chr18_-_22930826_22931470	0.0210095	SOX2.p2	
hg19_v1_chr4_-_54930466_54930587	0.0209708	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr6_-_47277640_47277640	0.0209542	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr7_+_39663199_39663224	0.0209036	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chrX_-_128657381_128657436	0.0206402	SOX2.p2	BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v1_chr5_+_40909617_40909673	0.0205731	SOX2.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr14_-_50999178_50999442	0.0205197	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v1_chr3_-_150264280_150264427	0.0204197	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg19_v1_chr6_+_42981840_42981954	0.0202237	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr19_+_16178170_16178350	0.0200944	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr7_+_27224163_27224285	0.0199372	SOX2.p2	
hg19_v1_chr1_-_13610486_13610554	0.0198269	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg19_v1_chr19_+_9434854_9435016	0.0197415	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	NM_001202412|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough
hg19_v1_chr10_-_99161013_99161138	0.0196379	SOX2.p2	AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)
hg19_v1_chr3_-_126373957_126373996	0.0195738	SOX2.p2	NM_001173513|TXNRD3|114112|thioredoxin reductase 3	NM_052883|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr9_+_125281418_125281420	0.0193336	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg19_v1_chr22_-_42336222_42336222	0.0192457	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chr15_+_41625152_41625179	0.0192126	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg19_v1_chr16_+_28858009_28858064	0.0190967	SOX2.p2	AK055104|SH2B1|25970|SH2B adaptor protein 1
hg19_v1_chr6_-_105307782_105307795	0.0189192	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr6_+_127664496_127664627	0.0189184	SOX2.p2	
hg19_v1_chr20_-_3388219_3388285	0.0188501	SOX2.p2	NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194
hg19_v1_chr6_-_136610932_136610988	0.0188094	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr11_-_18548363_18548502	0.0186751	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg19_v1_chr16_-_4562979_4563123	0.0183456	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr3_+_150264576_150264596	0.018345	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr12_+_93130264_93130310	0.0182413	SOX2.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg19_v1_chr8_+_29952921_29952965	0.0181612	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr1_-_151319674_151319702	0.0177324	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg19_v1_chr19_+_44100734_44100787	0.0176806	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg19_v1_chr14_+_105780903_105781178	0.0176245	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg19_v1_chr22_+_20105095_20105118	0.0175063	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chrX_+_108779009_108779020	0.0173811	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr4_-_83931861_83931962	0.0172937	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg19_v1_chr5_-_32403310_32403396	0.0172519	SOX2.p2	BC062986|ZFR|51663|zinc finger RNA binding protein	BC051893|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr10_+_102672685_102672866	0.0171865	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg19_v1_chr10_-_1779669_1779669	0.0170587	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg19_v1_chr6_-_47277511_47277639	0.0169716	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr9_+_6413183_6413211	0.0169126	SOX2.p2	AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg19_v1_chr9_-_21994329_21994370	0.0168664	SOX2.p2	BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg19_v1_chr1_-_51787881_51787937	0.016795	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg19_v1_chr20_+_34042908_34043241	0.0164477	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg19_v1_chr2_-_86116016_86116156	0.0164134	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr15_-_40331316_40331388	0.0163482	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg19_v1_chr19_+_18263998_18264066	0.0163143	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg19_v1_chr1_-_182360181_182360261	0.0162926	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr10_-_64576074_64576121	0.0160839	SOX2.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg19_v1_chr16_+_10479911_10479924	0.0160268	SOX2.p2	AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg19_v1_chr4_-_41216455_41216683	0.0160183	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr3_-_126373873_126373956	0.0159623	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr2_+_18059923_18059986	0.015724	SOX2.p2	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg19_v1_chr19_+_50180492_50180551	0.0154175	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr14_-_104028972_104029150	0.0152789	SOX2.p2	AB020680|BAG5|9529|BCL2-associated athanogene 5	NM_001015048|BAG5|9529|BCL2-associated athanogene 5
hg19_v1_chr12_-_56709831_56710127	0.0152762	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr3_+_138067444_138067579	0.0152476	SOX2.p2	NM_001085049|MRAS|22808|muscle RAS oncogene homolog	NM_001252093|MRAS|22808|muscle RAS oncogene homolog	BC047690|MRAS|22808|muscle RAS oncogene homolog	AF043938|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr4_-_146859568_146859786	0.0150997	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg19_v1_chr6_-_88299726_88299753	0.0150522	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr7_+_39663257_39663359	0.0150483	SOX2.p2	AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr18_-_52969714_52969851	0.014859	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr9_+_131644368_131644398	0.0148556	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr12_-_90049818_90049884	0.0148436	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg19_v1_chrX_+_142967172_142967172	0.0148382	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr8_-_23261675_23261721	0.0146328	SOX2.p2	NM_002318|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr2_-_170430312_170430423	0.0145847	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg19_v1_chr18_+_33552587_33552747	0.0145838	SOX2.p2	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21	NM_031446|C18orf21|83608|chromosome 18 open reading frame 21	BC108730|C18orf21|83608|chromosome 18 open reading frame 21	BC119765|C18orf21|83608|chromosome 18 open reading frame 21	BC119766|C18orf21|83608|chromosome 18 open reading frame 21	AF277182|C18orf21|83608|chromosome 18 open reading frame 21	AF277189|C18orf21|83608|chromosome 18 open reading frame 21	BC025950|C18orf21|83608|chromosome 18 open reading frame 21
hg19_v1_chr13_-_26795927_26796027	0.0143277	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr10_-_79397470_79397502	0.0141784	SOX2.p2	U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v1_chr13_-_26795821_26795893	0.0140856	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr7_-_23509631_23509728	0.0140514	SOX2.p2	
hg19_v1_chr18_-_21851902_21851921	0.0140447	SOX2.p2	AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr4_+_2471179_2471182	0.0140076	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg19_v1_chr8_-_38325825_38326072	0.0138852	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr22_+_20104810_20105027	0.0138824	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr14_-_74180341_74181182	0.0137366	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg19_v1_chr13_-_99852925_99853010	0.0134716	SOX2.p2	BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)
hg19_v1_chr19_+_9732136_9732217	0.0133721	SOX2.p2	NM_001242812|LOC284385|284385|uncharacterized LOC284385	AK097685|LOC284385|284385|uncharacterized LOC284385	BC143540|LOC284385|284385|uncharacterized LOC284385
hg19_v1_chr1_-_241799101_241799231	0.0133169	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr10_+_13203547_13203589	0.0132174	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr14_+_73603168_73603193	0.0131014	SOX2.p2	L42110|PSEN1|5663|presenilin 1
hg19_v1_chr4_-_1685717_1685987	0.0130101	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg19_v1_chr14_-_67826414_67826719	0.0129581	SOX2.p2	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg19_v1_chr5_+_156693051_156693454	0.0129551	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr1_+_25071967_25072044	0.0128669	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chrX_+_136648687_136648848	0.0127712	SOX2.p2	EU532020|ZIC3|7547|Zic family member 3	BC113393|ZIC3|7547|Zic family member 3	BC113395|ZIC3|7547|Zic family member 3	HQ258447|ZIC3|7547|Zic family member 3
hg19_v1_chr12_+_7080077_7080078	0.0126516	SOX2.p2	AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr3_+_49977476_49977577	0.0125998	SOX2.p2	AK291719|RBM6|10180|RNA binding motif protein 6	NM_001167582|RBM6|10180|RNA binding motif protein 6	NM_005777|RBM6|10180|RNA binding motif protein 6	AK298108|RBM6|10180|RNA binding motif protein 6	AF069517|RBM6|10180|RNA binding motif protein 6	AL832236|RBM6|10180|RNA binding motif protein 6	BX648535|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr1_-_76081693_76081799	0.012589	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg19_v1_chr6_-_89673127_89673255	0.0125246	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chrX_+_70315637_70316378	0.0125131	SOX2.p2	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg19_v1_chr9_-_35748875_35749029	0.0124826	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg19_v1_chr3_-_33700932_33701071	0.0124518	SOX2.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr13_+_97794050_97794115	0.0124426	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr2_+_70314903_70314932	0.0123821	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr6_-_88299692_88299723	0.0123409	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr2_-_172967014_172967055	0.0123293	SOX2.p2	L07919|DLX2|1746|distal-less homeobox 2
hg19_v1_chr10_+_93558139_93558165	0.0123042	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr7_+_39663140_39663193	0.0121798	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr6_-_166582129_166582130	0.0121707	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg19_v1_chr11_-_59383616_59383616	0.0121438	SOX2.p2	AF185696|OSBP|5007|oxysterol binding protein	M86917|OSBP|5007|oxysterol binding protein	NM_002556|OSBP|5007|oxysterol binding protein
hg19_v1_chr19_+_52772847_52772866	0.0120871	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg19_v1_chr14_-_21493122_21493271	0.0120462	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg19_v1_chr9_-_134955243_134955257	0.0120204	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr6_-_105307708_105307742	0.0119193	SOX2.p2	AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr14_+_22989334_22989364	0.0118701	SOX2.p2	
hg19_v1_chr15_-_48937795_48938064	0.0118291	SOX2.p2	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg19_v1_chr17_-_74068522_74068575	0.0118237	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr11_+_66278076_66278157	0.0118199	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg19_v1_chr9_+_131644427_131644478	0.011761	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr1_-_155178968_155178986	0.0117225	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg19_v1_chr12_-_50419160_50419306	0.0116161	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg19_v1_chr1_+_173684136_173684231	0.0115687	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr6_-_89673270_89673346	0.0115479	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr2_-_232329064_232329207	0.0115186	SOX2.p2	AK000221|NCL|4691|nucleolin	AK091742|NCL|4691|nucleolin	AK095897|NCL|4691|nucleolin	AK122805|NCL|4691|nucleolin	NM_005381|NCL|4691|nucleolin	AK127608|NCL|4691|nucleolin
hg19_v1_chr3_-_139258531_139258670	0.0114886	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr12_+_72057990_72058289	0.0114005	SOX2.p2	AK313452|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AM393083|THAP2|83591|THAP domain containing, apoptosis associated protein 2	CR533485|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr22_-_30867944_30868033	0.0111941	SOX2.p2	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)
hg19_v1_chr7_-_148581359_148581376	0.0111226	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr2_-_106810735_106810755	0.0110578	SOX2.p2	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr6_-_47277646_47277744	0.0110379	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr6_+_125474800_125475079	0.0110164	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg19_v1_chr11_+_61008643_61008668	0.0108739	SOX2.p2	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)
hg19_v1_chr1_+_44679111_44679175	0.0106931	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg19_v1_chr13_-_31039966_31040021	0.0106412	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr9_-_136344182_136344275	0.0105838	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg19_v1_chr7_-_143991255_143991279	0.0104338	SOX2.p2	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr17_-_61819165_61819329	0.0103953	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr2_+_31456879_31456964	0.0102711	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr12_+_133657439_133657469	0.0102092	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg19_v1_chr6_-_27835308_27835370	0.0101391	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr9_-_99329092_99329202	0.0100781	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg19_v1_chr3_+_93781823_93781865	0.0100557	SOX2.p2	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg19_v1_chr19_-_6459735_6459875	0.0100331	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr11_-_75236418_75236598	0.0100085	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg19_v1_chrX_+_71130619_71130937	0.00991423	SOX2.p2	NM_001013627|NHSL2|340527|NHS-like 2
hg19_v1_chr2_-_190649075_190649122	0.00988022	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg19_v1_chr18_-_44702647_44702731	0.00987088	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr1_-_111148974_111148990	0.00954886	SOX2.p2	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg19_v1_chr14_-_31926597_31926753	0.00947689	SOX2.p2	BC010618|C14orf126|112487|chromosome 14 open reading frame 126	AK055367|C14orf126|112487|chromosome 14 open reading frame 126	NM_080664|C14orf126|112487|chromosome 14 open reading frame 126
hg19_v1_chr7_-_50518021_50518087	0.009443	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg19_v1_chr9_+_35829208_35829279	0.00943922	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr4_-_83351294_83351413	0.00936116	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_001207000|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr16_-_57481270_57481439	0.00919837	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr18_-_32957287_32957300	0.00902867	SOX2.p2	BC130288|ZNF396|252884|zinc finger protein 396	BC136314|ZNF396|252884|zinc finger protein 396	AF492004|ZNF396|252884|zinc finger protein 396	AF533251|ZNF396|252884|zinc finger protein 396	AK055775|ZNF396|252884|zinc finger protein 396	NM_145756|ZNF396|252884|zinc finger protein 396
hg19_v1_chr14_+_58894395_58894447	0.00898951	SOX2.p2	
hg19_v1_chr18_+_60383895_60383958	0.0089112	SOX2.p2	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1
hg19_v1_chr11_+_18720342_18720355	0.00888866	SOX2.p2	BC035692|TMEM86A|144110|transmembrane protein 86A	NM_153347|TMEM86A|144110|transmembrane protein 86A
hg19_v1_chr8_-_23261626_23261631	0.00878329	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr9_-_113341772_113342356	0.00867251	SOX2.p2	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v1_chr20_-_45976626_45976669	0.00865828	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr16_-_15736964_15737022	0.00857338	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg19_v1_chr8_+_76452202_76452227	0.00855994	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma	HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr8_+_68864612_68864654	0.00851699	SOX2.p2	AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr3_-_57583153_57583228	0.00832062	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr18_+_55711388_55711685	0.00829979	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr11_-_118661856_118661862	0.00825882	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr20_-_33265088_33265088	0.00820698	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg19_v1_chr19_-_6459576_6459667	0.00797778	SOX2.p2	AK294514|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr11_+_5841543_5841565	0.00795814	SOX2.p2	BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2	NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2
hg19_v1_chr6_-_48078909_48078942	0.00788317	SOX2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg19_v1_chr8_+_126010748_126010804	0.00785506	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg19_v1_chr3_-_183735617_183735765	0.00776573	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr9_+_6720862_6720862	0.00772187	SOX2.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg19_v1_chr15_+_50647105_50647215	0.00767833	SOX2.p2	BC014238|LOC100129387|100129387|uncharacterized LOC100129387	BC004103|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr6_+_43149905_43149924	0.00767271	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg19_v1_chrX_-_2882288_2882493	0.00762555	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg19_v1_chr6_+_18155535_18155776	0.00757801	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg19_v1_chr19_+_44576266_44576354	0.00750532	SOX2.p2	AY458845|ZNF284|342909|zinc finger protein 284	NM_001037813|ZNF284|342909|zinc finger protein 284	CR936662|ZNF284|342909|zinc finger protein 284
hg19_v1_chr18_-_60795878_60795992	0.00740634	SOX2.p2	AF401211|BCL2|596|B-cell CLL/lymphoma 2
hg19_v1_chr12_+_133657478_133657596	0.00713434	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg19_v1_chr2_-_85641128_85641145	0.00710976	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg19_v1_chr9_+_132597718_132597727	0.0070855	SOX2.p2	BC033669|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr11_-_107729913_107729913	0.00682294	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr10_-_28591844_28592020	0.00679578	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v1_chr20_+_31643136_31643229	0.006717	SOX2.p2	BC113398|BPIFB3|359710|BPI fold containing family B, member 3	BC113400|BPIFB3|359710|BPI fold containing family B, member 3	HQ258440|BPIFB3|359710|BPI fold containing family B, member 3	AF549189|BPIFB3|359710|BPI fold containing family B, member 3	NM_182658|BPIFB3|359710|BPI fold containing family B, member 3
hg19_v1_chr1_+_150039815_150039913	0.00662492	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr8_-_23261632_23261666	0.00661168	SOX2.p2	AK222477|LOXL2|4017|lysyl oxidase-like 2	AK312266|LOXL2|4017|lysyl oxidase-like 2	BC020481|LOXL2|4017|lysyl oxidase-like 2	AK293292|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr12_+_133656984_133657046	0.00656788	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg19_v1_chr8_+_29952971_29953028	0.00652623	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr1_-_202830630_202830735	0.00649984	SOX2.p2	
hg19_v1_chrX_-_15872882_15872891	0.0063184	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr19_+_35417806_35417951	0.00619199	SOX2.p2	NM_001099437|ZNF30|90075|zinc finger protein 30	NM_001099438|ZNF30|90075|zinc finger protein 30	NM_194325|ZNF30|90075|zinc finger protein 30	BC142996|ZNF30|90075|zinc finger protein 30	BX640666|ZNF30|90075|zinc finger protein 30	AK295515|ZNF30|90075|zinc finger protein 30	AK290435|ZNF30|90075|zinc finger protein 30
hg19_v1_chr10_-_98592186_98592214	0.00615883	SOX2.p2	
hg19_v1_chr18_+_39535211_39535256	0.00591867	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg19_v1_chr3_+_23986735_23986895	0.00584966	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg19_v1_chr10_-_69991854_69991869	0.00568919	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)
hg19_v1_chr6_+_31515391_31515471	0.00522756	SOX2.p2	X77909|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105064|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105068|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC143671|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AK313888|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097419|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097420|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097421|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097422|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097423|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097424|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097425|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097426|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097427|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097428|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097429|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	EU446511|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chr8_-_23261591_23261612	0.00505055	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr17_+_42634598_42635055	0.00495832	SOX2.p2	NM_001466|FZD2|2535|frizzled family receptor 2	BC052266|FZD2|2535|frizzled family receptor 2	L37882|FZD2|2535|frizzled family receptor 2	BC113402|FZD2|2535|frizzled family receptor 2	BC113404|FZD2|2535|frizzled family receptor 2	AB017364|FZD2|2535|frizzled family receptor 2
hg19_v1_chr11_-_27742224_27742325	0.00488014	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chrX_+_102192199_102192199	0.00480109	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg19_v1_chr20_-_45035253_45035346	0.00470746	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg19_v1_chr22_+_20105076_20105093	0.0046821	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr15_+_93014906_93014906	0.00468067	SOX2.p2	AK057393|C15orf32|145858|chromosome 15 open reading frame 32	NM_153040|C15orf32|145858|chromosome 15 open reading frame 32
hg19_v1_chr14_+_73603140_73603159	0.00460631	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg19_v1_chrX_+_77166178_77166208	0.00457708	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr19_-_52408240_52408304	0.00446486	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg19_v1_chr1_-_25747276_25747404	0.00444147	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chr15_-_26108236_26108471	0.00442001	SOX2.p2	EU831492|ATP10A|57194|ATPase, class V, type 10A	EU831579|ATP10A|57194|ATPase, class V, type 10A	NM_024490|ATP10A|57194|ATPase, class V, type 10A	BC052251|ATP10A|57194|ATPase, class V, type 10A
hg19_v1_chr6_-_88299666_88299690	0.00437007	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr16_-_30103204_30103290	0.00426223	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr9_-_100684770_100684851	0.00410169	SOX2.p2	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg19_v1_chr15_+_45879575_45879640	0.00390005	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr16_+_67918780_67918781	0.00389614	SOX2.p2	AY358782|NRN1L|123904|neuritin 1-like	NM_198443|NRN1L|123904|neuritin 1-like	BC100863|NRN1L|123904|neuritin 1-like	BC100864|NRN1L|123904|neuritin 1-like	BC100865|NRN1L|123904|neuritin 1-like	BC100866|NRN1L|123904|neuritin 1-like
hg19_v1_chr10_-_128077062_128077066	0.00384392	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr19_+_50191920_50191941	0.00381619	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr12_+_65563339_65563370	0.00370174	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg19_v1_chr12_+_56137063_56137182	0.00363136	SOX2.p2	NM_005811|GDF11|10220|growth differentiation factor 11	AF100907|GDF11|10220|growth differentiation factor 11	AF028333|GDF11|10220|growth differentiation factor 11
hg19_v1_chr6_+_31515352_31515388	0.00361458	SOX2.p2	AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chr17_-_40169130_40169182	0.00349642	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr17_-_8079607_8079713	0.00338286	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr9_-_32552550_32552568	0.00336527	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr3_-_149095333_149095399	0.00329615	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr6_-_47277354_47277423	0.00327245	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr13_+_34392205_34392250	0.00326124	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr12_+_7079943_7080075	0.00322268	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr6_+_111279762_111279898	0.00319716	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg19_v1_chr9_-_140484899_140484965	0.00301618	SOX2.p2	BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19	AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19	AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19	NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19
hg19_v1_chr15_+_60296445_60296453	0.00301313	SOX2.p2	
hg19_v1_chr11_+_61129831_61129878	0.00294952	SOX2.p2	AK027724|TMEM138|51524|transmembrane protein 138	AK307371|TMEM138|51524|transmembrane protein 138	AF151030|TMEM138|51524|transmembrane protein 138	AK303219|TMEM138|51524|transmembrane protein 138	BC005201|TMEM138|51524|transmembrane protein 138	AF151032|TMEM138|51524|transmembrane protein 138
hg19_v1_chr9_-_125590809_125590934	0.00285963	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr6_-_84140758_84140825	0.00281823	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr19_+_52772823_52772845	0.00276275	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg19_v1_chr18_+_21269404_21269424	0.00274362	SOX2.p2	AK096422|LAMA3|3909|laminin, alpha 3
hg19_v1_chrX_+_41193409_41193505	0.00261523	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr11_-_85780899_85780922	0.00261444	SOX2.p2	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg19_v1_chr17_+_45973515_45973646	0.0024308	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg19_v1_chrX_-_47863260_47863446	0.00241086	SOX2.p2	BC114216|ZNF182|7569|zinc finger protein 182	AK299325|ZNF182|7569|zinc finger protein 182	AK122874|ZNF182|7569|zinc finger protein 182	NM_001007088|ZNF182|7569|zinc finger protein 182	NM_006962|ZNF182|7569|zinc finger protein 182	NM_001178099|ZNF182|7569|zinc finger protein 182
hg19_v1_chr1_-_20126368_20126452	0.00239363	SOX2.p2	BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4	NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4
hg19_v1_chr3_-_169482847_169482849	0.00237836	SOX2.p2	BC128029|TERC|7012|telomerase RNA component
hg19_v1_chr19_-_37019169_37019247	0.00233618	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg19_v1_chr17_+_30677178_30677185	0.00223837	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg19_v1_chr17_+_75316373_75316408	0.00201283	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg19_v1_chr20_+_39765849_39765876	0.00194935	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg19_v1_chr6_+_3259185_3259293	0.00189102	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr8_-_95565669_95565745	0.00186238	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429
hg19_v1_chr1_+_150266261_150266340	0.00169595	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg19_v1_chr12_-_72057523_72057673	0.00166833	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr7_+_113726364_113726478	0.00147776	SOX2.p2	AK131266|FOXP2|93986|forkhead box P2
hg19_v1_chr1_+_64239566_64239753	0.00143074	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg19_v1_chr4_-_141677470_141677529	0.00141507	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg19_v1_chr7_+_23286390_23286399	0.00140915	SOX2.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr16_+_2564000_2564104	0.00139512	SOX2.p2	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr19_-_51017765_51017965	0.00138156	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg19_v1_chr6_-_155777036_155777036	0.00136625	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg19_v1_chr4_-_76878558_76878565	0.00134179	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg19_v1_chr9_+_140083053_140083199	0.00131867	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg19_v1_chr12_+_50898744_50898767	0.00129651	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v1_chr14_+_38677186_38677203	0.00128516	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg19_v1_chr6_-_31745048_31745107	0.00126332	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg19_v1_chr3_+_179280746_179280881	0.00114647	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg19_v1_chr19_+_58144510_58144621	0.00109159	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg19_v1_chr15_-_50647275_50647325	0.00108827	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr3_+_182970853_182971044	0.00107345	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr14_+_50234907_50234935	0.000944785	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr2_-_136594749_136594749	0.000844343	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr15_+_60296420_60296437	0.000770343	SOX2.p2	AK290944|FOXB1|27023|forkhead box B1	NM_012182|FOXB1|27023|forkhead box B1
hg19_v1_chr7_-_149157866_149158052	0.000762197	SOX2.p2	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg19_v1_chr14_+_58894102_58894153	0.00069989	SOX2.p2	AK302836|KIAA0586|9786|KIAA0586	NM_001244189|KIAA0586|9786|KIAA0586	NM_001244190|KIAA0586|9786|KIAA0586	NM_001244191|KIAA0586|9786|KIAA0586	NM_001244192|KIAA0586|9786|KIAA0586	AB011158|KIAA0586|9786|KIAA0586	AK302635|KIAA0586|9786|KIAA0586	AY359881|KIAA0586|9786|KIAA0586
hg19_v1_chr7_+_74072007_74072036	0.000494535	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg19_v1_chr13_-_72440143_72440375	0.000451949	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg19_v1_chr16_-_87799495_87799536	0.000448563	SOX2.p2	BC001044|KLHDC4|54758|kelch domain containing 4
hg19_v1_chrX_+_41193843_41193887	0.000391102	SOX2.p2	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr13_-_30424671_30424734	0.000225018	SOX2.p2	AK056580|UBL3|5412|ubiquitin-like 3
hg19_v1_chr13_+_113656027_113656042	0.000168277	SOX2.p2	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	AK295047|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr2_+_173292344_173292614	0.000153519	SOX2.p2	X53586|ITGA6|3655|integrin, alpha 6	BC136455|ITGA6|3655|integrin, alpha 6	BC136456|ITGA6|3655|integrin, alpha 6	X59512|ITGA6|3655|integrin, alpha 6	AB208842|ITGA6|3655|integrin, alpha 6
hg19_v1_chr6_-_27799304_27799337	0.000136639	SOX2.p2	NM_003541|HIST1H4K|8362|histone cluster 1, H4k	BC148271|HIST1H4J|8363|histone cluster 1, H4j	DQ892605|HIST1H4F|8361|histone cluster 1, H4f	DQ895845|HIST1H4F|8361|histone cluster 1, H4f	EU446976|HIST1H4A|8359|histone cluster 1, H4a	AK312028|HIST1H4K|8362|histone cluster 1, H4k
hg19_v1_chr6_-_84140744_84140753	7.05276e-05	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr17_-_55927377_55927432	6.98401e-05	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg19_v1_chr6_+_41040713_41040732	3.53606e-05	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
