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Illumina Body Map 2
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Results for ARNT
Z-value: 1.00
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Transcription factors associated with ARNT
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| ARNT | hg19_v2_chr1_-_150849208_150849244 | 0.26 | 1.5e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_+_100211412 Show fit | 3.31 |
ENST00000323523.4
ENST00000403410.1 ENST00000449609.1 |
transmembrane protein 45A |
|
| chr11_+_76494253 Show fit | 3.31 |
ENST00000333090.4
|
tsukushi, small leucine rich proteoglycan |
|
| chr7_+_94023873 Show fit | 2.75 |
ENST00000297268.6
|
collagen, type I, alpha 2 |
|
| chr7_-_27170352 Show fit | 2.62 |
ENST00000428284.2
ENST00000360046.5 |
homeobox A4 |
|
| chr6_+_31865552 Show fit | 2.41 |
ENST00000469372.1
ENST00000497706.1 |
complement component 2 |
|
| chr11_-_64014379 Show fit | 2.19 |
ENST00000309318.3
|
protein phosphatase 1, regulatory (inhibitor) subunit 14B |
|
| chr5_-_172755056 Show fit | 1.97 |
ENST00000520648.1
|
stanniocalcin 2 |
|
| chr1_+_209848749 Show fit | 1.90 |
ENST00000367029.4
|
G0/G1switch 2 |
|
| chr2_-_28113965 Show fit | 1.71 |
ENST00000302188.3
|
ribokinase |
|
| chr6_+_43739697 Show fit | 1.66 |
ENST00000230480.6
|
vascular endothelial growth factor A |
Network of associatons between targets according to the STRING database.
First level regulatory network of ARNT
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 4.1 | GO:0061073 | ciliary body morphogenesis(GO:0061073) |
| 0.0 | 3.5 | GO:0002181 | cytoplasmic translation(GO:0002181) |
| 0.1 | 2.8 | GO:0043589 | skin morphogenesis(GO:0043589) |
| 0.1 | 2.7 | GO:0043153 | entrainment of circadian clock by photoperiod(GO:0043153) |
| 0.8 | 2.5 | GO:1903410 | lysine import(GO:0034226) L-lysine import(GO:0061461) L-lysine import into cell(GO:1903410) |
| 0.5 | 2.4 | GO:2000255 | negative regulation of male germ cell proliferation(GO:2000255) |
| 0.4 | 2.4 | GO:0019470 | 4-hydroxyproline catabolic process(GO:0019470) |
| 0.1 | 2.4 | GO:2000427 | positive regulation of apoptotic cell clearance(GO:2000427) |
| 0.1 | 2.4 | GO:0015886 | heme transport(GO:0015886) |
| 0.1 | 2.3 | GO:0060391 | positive regulation of SMAD protein import into nucleus(GO:0060391) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.4 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
| 0.0 | 4.5 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
| 0.0 | 3.7 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
| 0.1 | 2.9 | GO:0031307 | integral component of mitochondrial outer membrane(GO:0031307) |
| 0.0 | 2.9 | GO:0005811 | lipid particle(GO:0005811) |
| 0.9 | 2.8 | GO:0005584 | collagen type I trimer(GO:0005584) |
| 0.0 | 2.8 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
| 0.1 | 2.3 | GO:0005685 | U1 snRNP(GO:0005685) |
| 0.0 | 2.1 | GO:0000932 | cytoplasmic mRNA processing body(GO:0000932) |
| 0.4 | 2.0 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.0 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
| 0.1 | 2.8 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
| 0.0 | 2.7 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
| 0.3 | 2.6 | GO:0008379 | thioredoxin peroxidase activity(GO:0008379) |
| 0.5 | 2.5 | GO:0005292 | high-affinity basic amino acid transmembrane transporter activity(GO:0005287) high-affinity arginine transmembrane transporter activity(GO:0005289) high-affinity lysine transmembrane transporter activity(GO:0005292) |
| 0.0 | 2.5 | GO:0051087 | chaperone binding(GO:0051087) |
| 0.8 | 2.4 | GO:0015439 | heme-transporting ATPase activity(GO:0015439) |
| 0.8 | 2.4 | GO:0003842 | 1-pyrroline-5-carboxylate dehydrogenase activity(GO:0003842) |
| 0.0 | 2.4 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
| 0.3 | 2.3 | GO:0035614 | snRNA stem-loop binding(GO:0035614) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.2 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
| 0.0 | 5.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
| 0.1 | 4.2 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
| 0.0 | 4.0 | PID ILK PATHWAY | Integrin-linked kinase signaling |
| 0.0 | 3.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
| 0.1 | 3.0 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
| 0.0 | 2.3 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
| 0.0 | 2.2 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
| 0.0 | 2.1 | PID BMP PATHWAY | BMP receptor signaling |
| 0.0 | 2.0 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.1 | REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S | Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
| 0.0 | 4.3 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
| 0.0 | 4.1 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
| 0.0 | 3.7 | REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION | Genes involved in 3' -UTR-mediated translational regulation |
| 0.1 | 3.2 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
| 0.0 | 3.1 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
| 0.0 | 3.0 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
| 0.0 | 3.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
| 0.1 | 2.8 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
| 0.0 | 2.7 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |