Motif ID: AACCUGG

Z-value: 0.591


Mature miRNA associated with seed AACCUGG:

NamemiRBase Accession
hsa-miR-490-3p MIMAT0002806



Activity profile for motif AACCUGG.

activity profile for motif AACCUGG


Sorted Z-values histogram for motif AACCUGG

Sorted Z-values for motif AACCUGG



Network of associatons between targets according to the STRING database.



First level regulatory network of AACCUGG

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr4_+_174089889 7.923 NM_017423
GALNT7
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
chrX_+_123095555 6.649 NM_001042750
NM_001042751
NM_006603
STAG2


stromal antigen 2


chr3_-_189838907 5.814 NM_018192
LEPREL1
leprecan-like 1
chr3_-_189840225 5.535 NM_001134418
LEPREL1
leprecan-like 1
chrX_+_123094377 5.427 NM_001042749
STAG2
stromal antigen 2
chr20_-_57617836 5.009 NM_016045
SLMO2
slowmo homolog 2 (Drosophila)
chrX_-_110039285 4.842 NM_001143981
NM_001143982
NM_001143983
CHRDL1


chordin-like 1


chr7_-_30029904 4.697 NM_001145514
SCRN1
secernin 1
chrX_-_110038992 4.614 NM_145234
CHRDL1
chordin-like 1
chr3_-_149375584 4.387 NM_001168280
NM_015472
WWTR1

WW domain containing transcription regulator 1

chr7_-_30029284 4.308 NM_001145515
NM_014766
NM_001145513
SCRN1


secernin 1


chr3_-_149421059 4.245 NM_001168278
WWTR1
WW domain containing transcription regulator 1
chr7_+_77167351 3.706 NM_001131008
NM_001131009
PTPN12

protein tyrosine phosphatase, non-receptor type 12

chr11_+_125439294 3.680 NM_001007277
NM_004879
EI24

etoposide induced 2.4 mRNA

chr7_+_128379345 3.409 NM_001130674
NM_001199671
NM_001199672
NM_001199673
NM_001199674
NM_001219
CALU





calumenin





chr7_-_26240366 3.274 NM_002137
NM_031243
HNRNPA2B1

heterogeneous nuclear ribonucleoprotein A2/B1

chr19_+_34919213 2.997 NM_005499
UBA2
ubiquitin-like modifier activating enzyme 2
chr4_+_184020343 2.846 NM_024949
WWC2
WW and C2 domain containing 2
chr3_+_42947401 2.747 NM_207404
ZNF662
zinc finger protein 662
chr3_+_42947649 2.494 NM_001134656
ZNF662
zinc finger protein 662
chr8_-_93029864 2.403 NM_175636
RUNX1T1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr17_-_48785016 2.281 NM_052855
ANKRD40
ankyrin repeat domain 40
chr1_+_193091057 2.150 NM_024529
CDC73
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
chr18_+_34409058 1.956 NM_020776
KIAA1328
KIAA1328
chr7_+_77166750 1.923 NM_002835
PTPN12
protein tyrosine phosphatase, non-receptor type 12
chr2_+_192109879 1.828 NM_001130158
NM_012223
NM_001161819
MYO1B


myosin IB


chr2_+_178077421 1.811 NM_194247
HNRNPA3
heterogeneous nuclear ribonucleoprotein A3
chr5_+_122847792 1.786 NM_001031812
NM_001044722
NM_001044723
NM_004384
CSNK1G3



casein kinase 1, gamma 3



chr12_+_56360547 1.760 NM_001798
NM_052827
CDK2

cyclin-dependent kinase 2

chr12_+_54674478 1.675 NM_002136
NM_031157
HNRNPA1

heterogeneous nuclear ribonucleoprotein A1

chr11_+_125462736 1.602 NM_152713
STT3A
STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr7_+_100797685 1.587 NM_001283
AP1S1
adaptor-related protein complex 1, sigma 1 subunit
chr3_-_11623829 1.569 NM_001128220
VGLL4
vestigial like 4 (Drosophila)
chr19_-_2456954 1.536 NM_032737
LMNB2
lamin B2
chr17_-_1303548 1.481 NM_006761
YWHAE
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
chr1_-_247094659 1.460 NM_015446
AHCTF1
AHCTF1P1
AT hook containing transcription factor 1
AT hook containing transcription factor 1 pseudogene 1
chr16_-_2318412 1.372 NM_080594
RNPS1
RNA binding protein S1, serine-rich domain
chr7_-_25164902 1.209 NM_018947
CYCS
cytochrome c, somatic
chr2_+_232651059 1.198 NM_022730
COPS7B
COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)
chr3_-_11610264 1.159 NM_001128221
VGLL4
vestigial like 4 (Drosophila)
chr8_-_93107442 1.158 NM_001198629
NM_001198630
NM_001198632
NM_175635
RUNX1T1



runt-related transcription factor 1; translocated to, 1 (cyclin D-related)



chr3_+_187943192 1.128 NM_001167671
LPP
LIM domain containing preferred translocation partner in lipoma
chr2_+_75873907 1.093 NM_014763
MRPL19
mitochondrial ribosomal protein L19
chr1_-_151882360 1.090 NM_053055
THEM4
thioesterase superfamily member 4
chr17_-_77005822 1.083 NM_001159772
NM_001159773
NM_138793
CANT1


calcium activated nucleotidase 1


chr19_+_11200037 1.063 NM_000527
NM_001195798
NM_001195799
NM_001195800
NM_001195802
NM_001195803
LDLR





low density lipoprotein receptor





chr2_+_97001463 1.058 NM_015341
NCAPH
non-SMC condensin I complex, subunit H
chr19_-_37157718 1.029 NM_153257
ZNF461
zinc finger protein 461
chr13_+_53191601 0.965 NM_001011724
NM_001011725
HNRNPA1L2

heterogeneous nuclear ribonucleoprotein A1-like 2

chr17_-_47439326 0.923 NM_001145365
NM_014897
ZNF652

zinc finger protein 652

chr3_+_187930720 0.913 NM_005578
LPP
LIM domain containing preferred translocation partner in lipoma
chr5_-_16936371 0.913 NM_012334
MYO10
myosin X
chr20_-_34252861 0.899 NM_001198838
NM_001198840
NM_006047
NM_152838
NM_001198863
NM_152925
NM_152926
NM_152927
NM_152928
RBM12



CPNE1




RNA binding motif protein 12



copine I




chr22_+_24951617 0.896 NM_004175
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide 18kDa
chr7_+_23286277 0.881 NM_001005340
NM_002510
GPNMB

glycoprotein (transmembrane) nmb

chr16_-_2317827 0.870 NM_006711
RNPS1
RNA binding protein S1, serine-rich domain
chr5_-_171881421 0.864 NM_001017995
SH3PXD2B
SH3 and PX domains 2B
chr12_-_69326946 0.855 NM_001005502
NM_198320
CPM

carboxypeptidase M

chr8_-_67525426 0.842 NM_001080416
NM_001144755
MYBL1

LOC645895
v-myb myeloblastosis viral oncogene homolog (avian)-like 1

uncharacterized LOC645895
chr3_-_11685395 0.819 NM_001128219
VGLL4
vestigial like 4 (Drosophila)
chr17_+_7155371 0.815 NM_203415
NM_015362
NM_203413
NM_203414
C17orf81



chromosome 17 open reading frame 81



chr9_-_38069207 0.789 NM_003028
SHB
Src homology 2 domain containing adaptor protein B
chr3_+_187871473 0.762 NM_001167672
LPP
LIM domain containing preferred translocation partner in lipoma
chr8_-_93115453 0.746 NM_001198633
NM_175634
RUNX1T1

runt-related transcription factor 1; translocated to, 1 (cyclin D-related)

chr1_-_224622000 0.740 NM_001115113
NM_025160
WDR26

WD repeat domain 26

chr3_-_87040246 0.735 NM_016206
VGLL3
vestigial like 3 (Drosophila)
chr6_-_82462374 0.690 NM_017633
FAM46A
family with sequence similarity 46, member A
chr15_+_67418053 0.680 NM_001145102
SMAD3
SMAD family member 3
chr3_-_11761946 0.677 NM_014667
VGLL4
vestigial like 4 (Drosophila)
chrX_+_146993450 0.655 NM_001185075
NM_001185076
NM_001185081
NM_001185082
NM_002024
FMR1




fragile X mental retardation 1




chr4_+_1902352 0.645 NM_133334
WHSC1
Wolf-Hirschhorn syndrome candidate 1
chr5_+_176560056 0.628 NM_172349
NSD1
nuclear receptor binding SET domain protein 1
chr13_+_30002776 0.591 NM_015233
MTUS2
microtubule associated tumor suppressor candidate 2
chr1_-_201465700 0.570 NM_001193572
CSRP1
cysteine and glycine-rich protein 1
chr6_+_34759743 0.521 NM_017754
UHRF1BP1
UHRF1 binding protein 1
chr8_-_93107881 0.499 NM_001198625
NM_001198626
NM_001198627
NM_001198631
NM_001198634
NM_001198679
RUNX1T1





runt-related transcription factor 1; translocated to, 1 (cyclin D-related)





chr5_+_109025135 0.492 NM_002372
MAN2A1
mannosidase, alpha, class 2A, member 1
chr15_+_67458492 0.476 NM_001145104
SMAD3
SMAD family member 3
chr2_+_86947387 0.463 NM_022780
RMND5A
required for meiotic nuclear division 5 homolog A (S. cerevisiae)
chr8_-_93111915 0.460 NM_001198628
RUNX1T1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr1_-_201475966 0.446 NM_001193571
CSRP1
cysteine and glycine-rich protein 1
chr1_+_145096391 0.408 NM_004892
SEC22B
SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)
chr20_-_56286540 0.396 NM_199171
PMEPA1
prostate transmembrane protein, androgen induced 1
chr20_-_56285576 0.389 NM_199169
NM_199170
PMEPA1

prostate transmembrane protein, androgen induced 1

chr1_-_201476248 0.370 NM_001193570
NM_004078
CSRP1

cysteine and glycine-rich protein 1

chr4_-_56412968 0.351 NM_004898
CLOCK
clock homolog (mouse)
chr8_-_93075190 0.348 NM_004349
RUNX1T1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr17_+_5390212 0.320 NM_024039
MIS12
MIS12, MIND kinetochore complex component, homolog (S. pombe)
chr3_+_111805174 0.318 NM_001171747
NM_024616
C3orf52

chromosome 3 open reading frame 52

chr20_-_56284945 0.302 NM_020182
PMEPA1
prostate transmembrane protein, androgen induced 1
chr2_-_85788644 0.298 NM_000821
NM_001142269
GGCX

gamma-glutamyl carboxylase

chr18_+_55019720 0.279 NM_015879
ST8SIA3
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr15_+_67430358 0.254 NM_001145103
SMAD3
SMAD family member 3
chr2_+_48757292 0.249 NM_001198595
NM_006873
STON1

stonin 1

chr7_+_129710336 0.248 NM_014997
KLHDC10
kelch domain containing 10
chr1_+_153388999 0.233 NM_176823
S100A7A
S100 calcium binding protein A7A
chr13_+_50202434 0.216 NM_138450
ARL11
ADP-ribosylation factor-like 11
chr15_+_67358194 0.201 NM_005902
SMAD3
SMAD family member 3
chr3_+_101498285 0.192 NM_001134456
FAM55C
family with sequence similarity 55, member C
chr3_+_193310921 0.187 NM_015560
NM_130831
NM_130832
NM_130833
NM_130834
NM_130835
NM_130836
NM_130837
OPA1







optic atrophy 1 (autosomal dominant)







chr7_+_138482696 0.180 NM_001085429
TMEM213
transmembrane protein 213
chr18_+_77794345 0.179 NM_001171967
NM_024805
RBFA

ribosome binding factor A (putative)

chr1_-_8003224 0.176 NM_001561
TNFRSF9
tumor necrosis factor receptor superfamily, member 9
chrX_+_9983793 0.164 NM_015691
WWC3
WWC family member 3
chr13_+_29598746 0.155 NM_001033602
MTUS2
microtubule associated tumor suppressor candidate 2
chr18_+_42260774 0.145 NM_015559
SETBP1
SET binding protein 1
chrX_+_152082985 0.136 NM_001178106
NM_001178107
NM_001178108
NM_001178109
NM_001178110
NM_007150
ZNF185





zinc finger protein 185 (LIM domain)





chr3_-_45017600 0.131 NM_001135179
NM_016598
ZDHHC3

zinc finger, DHHC-type containing 3

chr19_-_44100127 0.124 NM_001007561
IRGQ
immunity-related GTPase family, Q
chr21_+_37536838 0.098 NM_005128
DOPEY2
dopey family member 2
chr3_+_101498028 0.076 NM_145037
FAM55C
family with sequence similarity 55, member C
chr20_+_43104513 0.066 NM_001039199
NM_024331
TTPAL

tocopherol (alpha) transfer protein-like

chr12_-_69357019 0.060 NM_001874
CPM
carboxypeptidase M
chr1_+_145524989 0.059 NM_003637
ITGA10
integrin, alpha 10
chr6_-_119252887 0.051 NM_017696
MCM9
minichromosome maintenance complex component 9
chrX_+_152086408 0.049 NM_001178113
ZNF185
zinc finger protein 185 (LIM domain)
chr3_-_122233781 0.045 NM_002264
KPNA1
karyopherin alpha 1 (importin alpha 5)
chr6_+_76458888 0.040 NM_004999
MYO6
myosin VI
chr4_-_47840058 0.019 NM_006587
CORIN
corin, serine peptidase
chr15_-_27018216 0.015 NM_000814
GABRB3
gamma-aminobutyric acid (GABA) A receptor, beta 3
chr11_+_121163501 0.013 NM_001024956
SC5DL
sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like
chr12_-_21548370 0.005 NM_134431
SLCO1A2
solute carrier organic anion transporter family, member 1A2

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
11.53 9.38e-04 GO:0050657 nucleic acid transport
11.53 9.38e-04 GO:0050658 RNA transport
11.53 9.38e-04 GO:0051236 establishment of RNA localization
11.15 1.17e-03 GO:0006403 RNA localization
9.93 2.53e-03 GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport
10.80 7.43e-03 GO:0051028 mRNA transport

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
9.65 1.00e-03 GO:0031965 nuclear membrane
2.77 1.63e-03 GO:0012505 endomembrane system
1.40 2.82e-03 GO:0043229 intracellular organelle
1.40 3.03e-03 GO:0043226 organelle
6.62 3.47e-03 GO:0005635 nuclear envelope
1.44 5.04e-03 GO:0043231 intracellular membrane-bounded organelle
1.44 5.26e-03 GO:0043227 membrane-bounded organelle
1.67 7.16e-03 GO:0044446 intracellular organelle part
1.65 1.05e-02 GO:0044422 organelle part
1.28 1.12e-02 GO:0005622 intracellular
32.36 1.28e-02 GO:0030530 heterogeneous nuclear ribonucleoprotein complex
1.28 2.61e-02 GO:0044424 intracellular part
1.84 3.28e-02 GO:0032991 macromolecular complex
2.18 3.73e-02 GO:0031090 organelle membrane

Nothing significant found in function category.