Motif ID: NKX3-2.p2

Z-value: 2.020


Transcription factors associated with NKX3-2.p2:

Gene SymbolEntrez IDGene Name
NKX3-2 579 NK3 homeobox 2

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
NKX3-2chr4_-_13546037-0.304.8e-06Click!


Activity profile for motif NKX3-2.p2.

activity profile for motif NKX3-2.p2


Sorted Z-values histogram for motif NKX3-2.p2

Sorted Z-values for motif NKX3-2.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of NKX3-2.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr5_+_118604417 28.923 NM_001077654
TNFAIP8
tumor necrosis factor, alpha-induced protein 8
chr5_+_118604504 27.750 TNFAIP8
tumor necrosis factor, alpha-induced protein 8
chr16_-_88717395 22.537 NM_000101
CYBA
cytochrome b-245, alpha polypeptide
chr14_-_107179043 21.679 IGHA1
immunoglobulin heavy constant alpha 1
chr6_-_32497925 20.051 NM_002125
HLA-DRB5
major histocompatibility complex, class II, DR beta 5
chr13_+_31287614 16.859 NM_001204406
ALOX5AP
arachidonate 5-lipoxygenase-activating protein
chr5_-_149792370 16.442 NM_001025158
NM_001025159
NM_004355
CD74


CD74 molecule, major histocompatibility complex, class II invariant chain


chrX_-_47518539 15.608 NM_004182
NM_153477
UXT

ubiquitously-expressed, prefoldin-like chaperone

chr3_+_69134057 14.757 NM_006407
ARL6IP5
ADP-ribosylation-like factor 6 interacting protein 5
chr7_-_26232148 14.448 HNRNPA2B1
heterogeneous nuclear ribonucleoprotein A2/B1
chr16_-_28222700 13.727 XPO6
exportin 6
chr6_+_32407618 13.457 NM_019111
HLA-DRA
major histocompatibility complex, class II, DR alpha
chr20_-_34330093 13.183 RBM39
RNA binding motif protein 39
chr16_-_4896197 13.049 GLYR1
glyoxylate reductase 1 homolog (Arabidopsis)
chr13_+_31309644 13.018 NM_001629
ALOX5AP
arachidonate 5-lipoxygenase-activating protein
chr1_-_31230594 12.997 LAPTM5
lysosomal protein transmembrane 5
chr6_+_29974352 12.922 HLA-J
major histocompatibility complex, class I, J (pseudogene)
chr10_-_75193297 12.686 NM_001024593
ZMYND17
zinc finger, MYND-type containing 17
chr10_+_11047253 12.484 NM_001025077
CELF2
CUGBP, Elav-like family member 2
chr6_-_31550065 12.154 NM_002341
NM_009588
LTB

lymphotoxin beta (TNF superfamily, member 3)

chrX_-_47518487 12.009 UXT
ubiquitously-expressed, prefoldin-like chaperone
chr6_-_86352650 11.984 SYNCRIP
synaptotagmin binding, cytoplasmic RNA interacting protein
chr1_-_111743261 11.453 NM_024901
DENND2D
DENN/MADD domain containing 2D
chr12_-_46662709 11.423 SLC38A1
solute carrier family 38, member 1
chr14_-_106471439 11.041 IGHA1
IGHG1
IGHM
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant mu
chr4_-_83351294 11.026 NM_001207000
NM_031372
HNRPDL

heterogeneous nuclear ribonucleoprotein D-like

chr1_-_153363544 11.018 NM_002964
S100A8
S100 calcium binding protein A8
chr3_-_121379757 10.902 NM_005335
HCLS1
hematopoietic cell-specific Lyn substrate 1
chr6_-_32557431 10.831 NM_001243965
NM_002124
HLA-DRB1

HLA-DRB4
HLA-DRB5
major histocompatibility complex, class II, DR beta 1

major histocompatibility complex, class II, DR beta 4
major histocompatibility complex, class II, DR beta 5
chr6_+_29855506 10.755


chr20_-_34330179 10.710 NM_001242599
NM_001242600
NM_004902
NM_184234
RBM39



RNA binding motif protein 39



chr17_-_38721701 10.682 NM_001838
CCR7
chemokine (C-C motif) receptor 7
chr20_-_34330177 10.660 RBM39
RNA binding motif protein 39
chr12_-_46662779 10.624 SLC38A1
solute carrier family 38, member 1
chr11_+_117857123 10.611 IL10RA
interleukin 10 receptor, alpha
chr8_+_123793894 10.557 NM_014943
ZHX2
zinc fingers and homeoboxes 2
chr3_-_121379701 10.512 HCLS1
hematopoietic cell-specific Lyn substrate 1
chr11_+_60223281 10.491 NM_021950
NM_152866
MS4A1

membrane-spanning 4-domains, subfamily A, member 1

chr5_-_150467220 10.489 NM_001252390
TNIP1
TNFAIP3 interacting protein 1
chr8_+_123793988 10.473 ZHX2
zinc fingers and homeoboxes 2
chr11_+_117857062 10.297 NM_001558
IL10RA
interleukin 10 receptor, alpha
chr8_+_123794043 10.193 ZHX2
zinc fingers and homeoboxes 2
chr5_-_149792276 10.151 CD74
CD74 molecule, major histocompatibility complex, class II invariant chain
chr6_-_31324898 10.145 HLA-B
major histocompatibility complex, class I, B
chr11_-_102323353 10.068 NM_052932
TMEM123
transmembrane protein 123
chr10_+_11047274 10.045 CELF2
CUGBP, Elav-like family member 2
chr13_-_46756295 9.866 LCP1
lymphocyte cytosolic protein 1 (L-plastin)
chr12_-_92539614 9.776 NM_001731
BTG1
B-cell translocation gene 1, anti-proliferative
chr16_+_30075530 9.762 NM_184043
ALDOA
aldolase A, fructose-bisphosphate
chr13_-_46756326 9.728 NM_002298
LCP1
lymphocyte cytosolic protein 1 (L-plastin)
chr6_-_31324955 9.655 HLA-B
major histocompatibility complex, class I, B
chr16_-_11680756 9.634 NM_001136472
NM_001136473
LITAF

lipopolysaccharide-induced TNF factor

chr2_+_85804613 9.580 NM_003761
VAMP8
vesicle-associated membrane protein 8 (endobrevin)
chr1_+_26606212 9.496 NM_031286
SH3BGRL3
SH3 domain binding glutamic acid-rich protein like 3
chr19_+_41284068 9.379 NM_016154
RAB4B
RAB4B, member RAS oncogene family
chr16_+_30075440 9.204 ALDOA
aldolase A, fructose-bisphosphate
chr5_-_150466696 9.199 NM_001252391
NM_001252392
TNIP1

TNFAIP3 interacting protein 1

chr1_+_40735749 9.185 ZMPSTE24
zinc metallopeptidase (STE24 homolog, S. cerevisiae)
chr6_-_30712294 9.155 NM_003897
IER3
immediate early response 3
chr1_-_111743297 9.133 DENND2D
DENN/MADD domain containing 2D
chrX_+_131157635 9.090 NM_001042452
MST4
serine/threonine protein kinase MST4
chr2_+_219081864 9.006 NM_152862
ARPC2
actin related protein 2/3 complex, subunit 2, 34kDa
chr3_-_146262421 8.982 NM_021105
PLSCR1
phospholipid scramblase 1
chr3_-_81810618 8.902 GBE1
glucan (1,4-alpha-), branching enzyme 1
chr11_-_111249902 8.900 POU2AF1
POU class 2 associating factor 1
chr6_-_31324975 8.812 NM_005514
HLA-B
major histocompatibility complex, class I, B
chr8_-_117768032 8.790 EIF3H
eukaryotic translation initiation factor 3, subunit H
chr3_-_146262320 8.788 PLSCR1
phospholipid scramblase 1
chr1_+_26644458 8.607 CD52
CD52 molecule
chr1_-_25256767 8.591 NM_004350
RUNX3
runt-related transcription factor 3
chr2_+_219082119 8.556 NM_005731
ARPC2
actin related protein 2/3 complex, subunit 2, 34kDa
chr17_-_29648631 8.452 NM_001003927
NM_014210
EVI2A

ecotropic viral integration site 2A

chr2_+_85804724 8.438 VAMP8
vesicle-associated membrane protein 8 (endobrevin)
chr14_-_106733392 8.252 IGHG1
IGHG3
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 3 (G3m marker)
chr2_+_219081914 8.202 ARPC2
actin related protein 2/3 complex, subunit 2, 34kDa
chr10_+_11060105 8.161 CELF2
CUGBP, Elav-like family member 2
chr1_-_225616556 7.975 NM_194442
LBR
lamin B receptor
chr6_-_86352564 7.959 NM_001159674
NM_001253771
SYNCRIP

synaptotagmin binding, cytoplasmic RNA interacting protein

chr17_-_4851688 7.922 PFN1
profilin 1
chr18_-_51690988 7.918 MBD2
methyl-CpG binding domain protein 2
chr1_-_25291474 7.830 NM_001031680
RUNX3
runt-related transcription factor 3
chr7_-_102212967 7.789 POLR2J2
POLR2J3
polymerase (RNA) II (DNA directed) polypeptide J2
polymerase (RNA) II (DNA directed) polypeptide J3
chr2_-_152146373 7.770 NM_004688
NMI
N-myc (and STAT) interactor
chrX_+_131157231 7.603 NM_001042453
NM_016542
MST4

serine/threonine protein kinase MST4

chr19_+_49838673 7.587 NM_001040031
NM_001774
CD37

CD37 molecule

chr5_-_88119604 7.552 NM_001193348
NM_001193349
MEF2C

myocyte enhancer factor 2C

chr17_-_4851827 7.510 PFN1
profilin 1
chr1_-_154578775 7.473 NM_001193495
ADAR
adenosine deaminase, RNA-specific
chrX_+_70765479 7.433 OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chr1_-_154600383 7.343 ADAR
adenosine deaminase, RNA-specific
chr7_+_26403944 7.340 NM_001199838
SNX10
sorting nexin 10
chr1_-_27226928 7.335 GPATCH3
G patch domain containing 3
chr19_+_36705979 7.299 ZNF146
zinc finger protein 146
chr7_-_37488408 7.277 ELMO1
engulfment and cell motility 1
chr1_-_159895279 7.265 NM_003564
TAGLN2
transgelin 2
chr7_+_5013618 7.264 RNF216P1
ring finger protein 216 pseudogene 1
chr15_+_66694216 7.212 MAP2K1
mitogen-activated protein kinase kinase 1
chr17_-_4851797 7.206 NM_005022
PFN1
profilin 1
chr14_-_106539099 7.173 IGHA1
IGHG1
IGHG3
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 3 (G3m marker)
chr3_-_81810914 7.143 NM_000158
GBE1
glucan (1,4-alpha-), branching enzyme 1
chr13_+_53216564 7.116 HNRNPA1L2
heterogeneous nuclear ribonucleoprotein A1-like 2
chr14_+_23235730 7.110 NM_005015
OXA1L
oxidase (cytochrome c) assembly 1-like
chr5_-_134734796 7.077 H2AFY
H2A histone family, member Y
chr6_+_32605182 7.032 NM_002122
HLA-DQA1
major histocompatibility complex, class II, DQ alpha 1
chr14_-_24616429 7.005 PSME2
proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
chr10_-_27057776 6.998 ABI1
abl-interactor 1
chr6_-_86352635 6.954 NM_001159673
SYNCRIP
synaptotagmin binding, cytoplasmic RNA interacting protein
chr21_-_46340821 6.925 ITGB2
integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
chr8_+_41348067 6.873 NM_001174124
NM_016099
GOLGA7

golgin A7

chrX_+_123234462 6.847 STAG2
stromal antigen 2
chr21_-_46340776 6.820 ITGB2
integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
chr8_+_41348126 6.743 NM_001002296
GOLGA7
golgin A7
chr1_+_26856252 6.742 RPS6KA1
ribosomal protein S6 kinase, 90kDa, polypeptide 1
chr2_-_152146133 6.697 NMI
N-myc (and STAT) interactor
chr12_+_69742130 6.656 NM_000239
LYZ
lysozyme
chr8_+_41348094 6.638 GOLGA7
golgin A7
chr11_-_111250156 6.623 NM_006235
POU2AF1
POU class 2 associating factor 1
chr16_+_30075715 6.614 NM_001127617
ALDOA
aldolase A, fructose-bisphosphate
chr8_+_41348105 6.563 GOLGA7
golgin A7
chr16_-_46723024 6.546 VPS35
vacuolar protein sorting 35 homolog (S. cerevisiae)
chr19_+_49838700 6.499 CD37
CD37 molecule
chr19_+_49838646 6.499 CD37
CD37 molecule
chr7_+_98972351 6.486 ARPC1B
actin related protein 2/3 complex, subunit 1B, 41kDa
chr1_-_159895258 6.484 TAGLN2
transgelin 2
chr10_+_11060069 6.465 CELF2
CUGBP, Elav-like family member 2
chr6_-_32634287 6.463 NM_001243961
NM_002123
HLA-DQB1

major histocompatibility complex, class II, DQ beta 1

chr1_+_24286300 6.463 NM_017761
PNRC2
proline-rich nuclear receptor coactivator 2
chr19_-_8642309 6.449 NM_012335
MYO1F
myosin IF
chrX_+_13707236 6.422 NM_001195328
NM_004251
RAB9A

RAB9A, member RAS oncogene family

chr14_-_106877689 6.374 IGHV4-31
IGH@
IGHA1
IGHA2
IGHG1
IGHG4
IGHM
immunoglobulin heavy variable 4-31
immunoglobulin heavy locus
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant alpha 2 (A2m marker)
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 4 (G4m marker)
immunoglobulin heavy constant mu
chr22_+_43547558 6.370 TSPO
translocator protein (18kDa)
chr2_+_68592432 6.360 PLEK
pleckstrin
chr1_+_211519705 6.324 NM_145759
TRAF5
TNF receptor-associated factor 5
chrX_-_153602998 6.306 NM_001110556
NM_001456
FLNA

filamin A, alpha

chr1_-_245025958 6.289 HNRNPU
heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
chr22_+_22569155 6.273


chr1_+_32687970 6.273 NM_003757
EIF3I
eukaryotic translation initiation factor 3, subunit I
chr12_-_49318663 6.264 NM_001143781
FKBP11
FK506 binding protein 11, 19 kDa
chr12_+_25205180 6.263 NM_001204126
NM_001204127
NM_006152
LRMP


lymphoid-restricted membrane protein


chr6_-_32821743 6.258 NM_000593
TAP1
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
chr1_-_154600446 6.248 NM_001025107
ADAR
adenosine deaminase, RNA-specific
chr1_-_235292206 6.189 NM_014765
TOMM20
translocase of outer mitochondrial membrane 20 homolog (yeast)
chr19_+_49838734 6.176 CD37
CD37 molecule
chr16_-_28223161 6.172 NM_015171
XPO6
exportin 6
chr10_-_121296044 6.169 NM_002925
RGS10
regulator of G-protein signaling 10
chr6_-_86352982 6.143 NM_001159677
NM_006372
SYNCRIP

synaptotagmin binding, cytoplasmic RNA interacting protein

chr11_+_1889902 6.141 NM_001013253
LSP1
lymphocyte-specific protein 1
chr10_-_120938276 6.114 PRDX3
peroxiredoxin 3
chr12_-_46662533 6.102 SLC38A1
solute carrier family 38, member 1
chr14_+_105953531 6.087 CRIP1
cysteine-rich protein 1 (intestinal)
chr22_+_37257004 6.085 NM_000631
NM_013416
NCF4

neutrophil cytosolic factor 4, 40kDa

chr1_+_24286311 6.077 PNRC2
proline-rich nuclear receptor coactivator 2
chr8_-_101962767 6.073 NM_001135702
YWHAZ
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr10_-_98031154 6.009 NM_001114094
NM_013314
BLNK

B-cell linker

chr6_-_32812711 6.001 NM_004159
PSMB8
proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7)
chr15_+_77287738 5.965 PSTPIP1
proline-serine-threonine phosphatase interacting protein 1
chr20_-_34329872 5.961 RBM39
RNA binding motif protein 39
chr7_-_87849341 5.951 SRI
sorcin
chr10_-_81965332 5.944 ANXA11
annexin A11
chr4_-_83350829 5.933 HNRPDL
heterogeneous nuclear ribonucleoprotein D-like
chr3_-_146262277 5.923 PLSCR1
phospholipid scramblase 1
chr3_+_121774208 5.920 NM_001206924
NM_001206925
NM_175862
CD86


CD86 molecule


chr3_+_50126340 5.920 NM_005778
RBM5
RNA binding motif protein 5
chr1_+_26644380 5.915 NM_001803
CD52
CD52 molecule
chr8_-_134072404 5.901 NM_006748
SLA
Src-like-adaptor
chr9_+_112542496 5.866 NM_053016
NM_007203
NM_147150
PALM2
PALM2-AKAP2

paralemmin 2
PALM2-AKAP2 readthrough

chr10_-_81965113 5.846 ANXA11
annexin A11
chr1_+_112162397 5.807 NM_001010935
NM_002884
RAP1A

RAP1A, member of RAS oncogene family

chr13_+_31309690 5.799 ALOX5AP
arachidonate 5-lipoxygenase-activating protein
chr19_-_8642297 5.765 MYO1F
myosin IF
chr9_-_137809710 5.756 NM_002003
FCN1
ficolin (collagen/fibrinogen domain containing) 1
chr15_+_44038483 5.724 NM_005313
PDIA3
protein disulfide isomerase family A, member 3
chr5_+_177631496 5.709 NM_004499
NM_031266
HNRNPAB

heterogeneous nuclear ribonucleoprotein A/B

chrX_+_128913897 5.707 SASH3
SAM and SH3 domain containing 3
chr9_+_77703395 5.697 NM_012383
OSTF1
osteoclast stimulating factor 1
chr14_+_70233862 5.686 SRSF5
serine/arginine-rich splicing factor 5
chr1_+_110091218 5.680 GNAI3
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
chr2_+_219081898 5.672 ARPC2
actin related protein 2/3 complex, subunit 2, 34kDa
chrX_+_128913881 5.598 NM_018990
SASH3
SAM and SH3 domain containing 3
chr17_-_29641094 5.597 NM_006495
EVI2B
ecotropic viral integration site 2B
chr7_+_98972326 5.584 ARPC1B
actin related protein 2/3 complex, subunit 1B, 41kDa
chr17_-_76128487 5.581 NM_007267
TMC6
transmembrane channel-like 6
chr3_-_107809754 5.567 NM_001777
NM_198793
CD47

CD47 molecule

chr10_+_11059854 5.563 NM_006561
CELF2
CUGBP, Elav-like family member 2
chr14_+_67656109 5.552 NM_173526
FAM71D
family with sequence similarity 71, member D
chr1_+_24018293 5.548 RPL11
ribosomal protein L11
chr1_-_32385258 5.533 NM_001195100
NM_001195101
PTP4A2

protein tyrosine phosphatase type IVA, member 2

chr1_+_53480573 5.517 NM_001007099
NM_001007100
NM_001007250
SCP2


sterol carrier protein 2


chr1_+_53480616 5.482 SCP2
sterol carrier protein 2
chr20_+_3869593 5.470 NM_153638
PANK2
pantothenate kinase 2
chr11_+_5710926 5.470 TRIM22
tripartite motif containing 22
chr1_+_153330329 5.468 NM_002965
S100A9
S100 calcium binding protein A9
chr2_-_158731622 5.460 NM_001105
ACVR1
activin A receptor, type I
chr2_-_145277879 5.444 NM_001171653
NM_014795
ZEB2

zinc finger E-box binding homeobox 2

chr1_+_32688010 5.429 EIF3I
eukaryotic translation initiation factor 3, subunit I
chr12_+_54891539 5.428 NCKAP1L
NCK-associated protein 1-like
chr12_-_110888079 5.422 ARPC3
actin related protein 2/3 complex, subunit 3, 21kDa
chr1_+_26856240 5.401 NM_002953
RPS6KA1
ribosomal protein S6 kinase, 90kDa, polypeptide 1
chr20_+_57464156 5.400 GNAS
GNAS complex locus
chr15_+_44038649 5.386 PDIA3
protein disulfide isomerase family A, member 3

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
1.23 5.15e-39 GO:0009987 cellular process
1.51 2.79e-29 GO:0044260 cellular macromolecule metabolic process
1.37 1.52e-26 GO:0044237 cellular metabolic process
1.43 2.06e-25 GO:0043170 macromolecule metabolic process
1.35 2.63e-24 GO:0044238 primary metabolic process
1.31 1.36e-23 GO:0008152 metabolic process
1.56 1.43e-18 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.73 3.60e-18 GO:0016070 RNA metabolic process
1.61 4.12e-17 GO:0090304 nucleic acid metabolic process
1.67 1.96e-16 GO:0010467 gene expression
1.45 1.48e-14 GO:0034641 cellular nitrogen compound metabolic process
1.44 2.25e-14 GO:0006807 nitrogen compound metabolic process
1.52 3.58e-14 GO:0044267 cellular protein metabolic process
1.76 4.62e-13 GO:0002376 immune system process
2.19 1.70e-12 GO:0016071 mRNA metabolic process
1.61 6.25e-12 GO:0034645 cellular macromolecule biosynthetic process
1.60 1.45e-11 GO:0009059 macromolecule biosynthetic process
1.86 3.19e-11 GO:0008219 cell death
1.85 4.98e-11 GO:0016265 death
1.41 1.05e-10 GO:0019538 protein metabolic process
1.46 1.44e-10 GO:0044249 cellular biosynthetic process
1.37 2.36e-10 GO:0071840 cellular component organization or biogenesis
1.43 2.44e-10 GO:0048518 positive regulation of biological process
1.21 8.21e-10 GO:0050789 regulation of biological process
1.36 1.04e-09 GO:0016043 cellular component organization
1.89 1.45e-09 GO:0012501 programmed cell death
1.89 2.25e-09 GO:0006915 apoptosis
1.42 4.37e-09 GO:0009058 biosynthetic process
2.85 7.05e-09 GO:0002757 immune response-activating signal transduction
1.18 1.18e-08 GO:0065007 biological regulation
1.42 1.44e-08 GO:0006950 response to stress
2.78 1.86e-08 GO:0002764 immune response-regulating signaling pathway
2.09 2.54e-08 GO:0050776 regulation of immune response
1.39 2.76e-08 GO:0071841 cellular component organization or biogenesis at cellular level
1.85 3.57e-08 GO:0002682 regulation of immune system process
1.78 5.09e-08 GO:0046907 intracellular transport
1.39 5.81e-08 GO:0071842 cellular component organization at cellular level
1.79 8.11e-08 GO:0006955 immune response
1.19 1.23e-07 GO:0050794 regulation of cellular process
1.74 1.25e-07 GO:0043933 macromolecular complex subunit organization
2.09 1.67e-07 GO:0016032 viral reproduction
1.98 2.50e-07 GO:0034621 cellular macromolecular complex subunit organization
1.39 4.53e-07 GO:0048522 positive regulation of cellular process
2.47 4.96e-07 GO:0002253 activation of immune response
1.82 7.33e-07 GO:0006396 RNA processing
1.56 9.67e-07 GO:0051641 cellular localization
1.30 1.25e-06 GO:0051179 localization
1.48 1.40e-06 GO:0006996 organelle organization
2.05 1.78e-06 GO:0006397 mRNA processing
1.64 1.91e-06 GO:0032774 RNA biosynthetic process
1.58 2.63e-06 GO:0051649 establishment of localization in cell
1.61 2.95e-06 GO:0032268 regulation of cellular protein metabolic process
2.49 3.48e-06 GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
2.49 3.48e-06 GO:0000398 nuclear mRNA splicing, via spliceosome
3.12 3.95e-06 GO:0002429 immune response-activating cell surface receptor signaling pathway
2.16 4.41e-06 GO:0006412 translation
1.59 4.97e-06 GO:0010941 regulation of cell death
1.59 5.05e-06 GO:0043067 regulation of programmed cell death
2.05 6.65e-06 GO:0044419 interspecies interaction between organisms
2.15 7.29e-06 GO:0008380 RNA splicing
2.42 9.04e-06 GO:0000375 RNA splicing, via transesterification reactions
1.25 1.15e-05 GO:0051716 cellular response to stimulus
3.00 1.20e-05 GO:0002768 immune response-regulating cell surface receptor signaling pathway
1.56 1.36e-05 GO:0051246 regulation of protein metabolic process
1.72 1.51e-05 GO:0065003 macromolecular complex assembly
1.58 1.56e-05 GO:0042981 regulation of apoptosis
1.40 1.76e-05 GO:0043412 macromolecule modification
2.15 1.80e-05 GO:0050778 positive regulation of immune response
1.78 2.15e-05 GO:0071822 protein complex subunit organization
2.83 2.26e-05 GO:0050657 nucleic acid transport
2.83 2.26e-05 GO:0050658 RNA transport
2.83 2.26e-05 GO:0051236 establishment of RNA localization
1.76 2.51e-05 GO:0009057 macromolecule catabolic process
1.40 4.52e-05 GO:0006464 protein modification process
1.48 5.31e-05 GO:0033036 macromolecule localization
2.74 5.85e-05 GO:0006403 RNA localization
1.56 6.18e-05 GO:0007049 cell cycle
1.27 6.87e-05 GO:0007165 signal transduction
1.87 7.08e-05 GO:0002684 positive regulation of immune system process
1.25 8.03e-05 GO:0019222 regulation of metabolic process
1.34 8.27e-05 GO:0048519 negative regulation of biological process
1.99 9.24e-05 GO:0018193 peptidyl-amino acid modification
1.27 1.08e-04 GO:0060255 regulation of macromolecule metabolic process
1.96 1.13e-04 GO:0034622 cellular macromolecular complex assembly
1.62 1.14e-04 GO:0006952 defense response
1.74 1.20e-04 GO:0000278 mitotic cell cycle
2.98 1.27e-04 GO:0050851 antigen receptor-mediated signaling pathway
1.60 1.76e-04 GO:0033554 cellular response to stress
1.70 1.88e-04 GO:0051726 regulation of cell cycle
2.33 1.91e-04 GO:0022411 cellular component disassembly
2.33 1.91e-04 GO:0071845 cellular component disassembly at cellular level
1.37 2.83e-04 GO:0048583 regulation of response to stimulus
2.00 3.56e-04 GO:0051325 interphase
1.48 3.58e-04 GO:0044085 cellular component biogenesis
2.74 3.69e-04 GO:0051028 mRNA transport
2.51 4.35e-04 GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport
2.00 4.39e-04 GO:0051329 interphase of mitotic cell cycle
1.51 4.60e-04 GO:0022607 cellular component assembly
1.43 4.65e-04 GO:0009056 catabolic process
1.56 5.49e-04 GO:0006351 transcription, DNA-dependent
1.58 8.12e-04 GO:0031399 regulation of protein modification process
1.23 9.37e-04 GO:0023052 signaling
1.72 9.48e-04 GO:0044265 cellular macromolecule catabolic process
1.98 1.12e-03 GO:0006366 transcription from RNA polymerase II promoter
2.95 1.33e-03 GO:0022618 ribonucleoprotein complex assembly
1.26 1.48e-03 GO:0051234 establishment of localization
1.27 1.68e-03 GO:0006810 transport
1.99 1.85e-03 GO:0010608 posttranscriptional regulation of gene expression
1.55 1.96e-03 GO:0022402 cell cycle process
2.25 2.18e-03 GO:0006913 nucleocytoplasmic transport
1.41 2.62e-03 GO:0035556 intracellular signal transduction
2.22 3.00e-03 GO:0051169 nuclear transport
3.82 3.35e-03 GO:0006413 translational initiation
2.08 3.40e-03 GO:0048011 nerve growth factor receptor signaling pathway
1.31 3.60e-03 GO:0048523 negative regulation of cellular process
1.90 4.23e-03 GO:0031401 positive regulation of protein modification process
2.93 4.33e-03 GO:0050852 T cell receptor signaling pathway
2.78 4.64e-03 GO:0071826 ribonucleoprotein complex subunit organization
1.58 4.74e-03 GO:0022403 cell cycle phase
1.55 4.75e-03 GO:0016192 vesicle-mediated transport
2.01 5.76e-03 GO:0032269 negative regulation of cellular protein metabolic process
1.22 6.01e-03 GO:0031323 regulation of cellular metabolic process
1.51 6.02e-03 GO:0045184 establishment of protein localization
3.04 6.34e-03 GO:0071214 cellular response to abiotic stimulus
2.52 6.44e-03 GO:0051320 S phase
3.13 6.52e-03 GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
3.13 6.52e-03 GO:0072395 signal transduction involved in cell cycle checkpoint
3.13 6.52e-03 GO:0072401 signal transduction involved in DNA integrity checkpoint
3.13 6.52e-03 GO:0072404 signal transduction involved in G1/S transition checkpoint
3.13 6.52e-03 GO:0072413 signal transduction involved in mitotic cell cycle checkpoint
3.13 6.52e-03 GO:0072422 signal transduction involved in DNA damage checkpoint
3.13 6.52e-03 GO:0072431 signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint
3.13 6.52e-03 GO:0072474 signal transduction involved in mitotic cell cycle G1/S checkpoint
2.79 6.54e-03 GO:2000045 regulation of G1/S transition of mitotic cell cycle
1.51 6.69e-03 GO:0015031 protein transport
1.78 8.32e-03 GO:0032270 positive regulation of cellular protein metabolic process
3.08 8.69e-03 GO:0031294 lymphocyte costimulation
3.08 8.69e-03 GO:0031295 T cell costimulation
1.97 8.82e-03 GO:0051248 negative regulation of protein metabolic process
2.82 9.20e-03 GO:0031575 mitotic cell cycle G1/S transition checkpoint
2.82 9.20e-03 GO:0071779 G1/S transition checkpoint
1.64 9.40e-03 GO:0006928 cellular component movement
1.51 1.06e-02 GO:0044093 positive regulation of molecular function
1.92 1.06e-02 GO:0007346 regulation of mitotic cell cycle
1.75 1.09e-02 GO:0051247 positive regulation of protein metabolic process
2.95 1.09e-02 GO:0031571 mitotic cell cycle G1/S transition DNA damage checkpoint
1.70 1.29e-02 GO:0016044 cellular membrane organization
2.48 1.37e-02 GO:0000084 S phase of mitotic cell cycle
2.98 1.51e-02 GO:0071158 positive regulation of cell cycle arrest
1.69 1.55e-02 GO:0061024 membrane organization
1.79 1.59e-02 GO:0012502 induction of programmed cell death
2.27 1.62e-02 GO:0000082 G1/S transition of mitotic cell cycle
2.45 1.66e-02 GO:0008624 induction of apoptosis by extracellular signals
2.59 1.78e-02 GO:0002758 innate immune response-activating signal transduction
1.41 1.80e-02 GO:0044248 cellular catabolic process
1.43 2.08e-02 GO:0008104 protein localization
2.76 2.09e-02 GO:0008063 Toll signaling pathway
2.76 2.09e-02 GO:0034142 toll-like receptor 4 signaling pathway
1.57 2.19e-02 GO:0051276 chromosome organization
1.40 2.36e-02 GO:0010604 positive regulation of macromolecule metabolic process
2.46 2.37e-02 GO:0090068 positive regulation of cell cycle process
1.51 2.64e-02 GO:0071844 cellular component assembly at cellular level
2.54 2.69e-02 GO:0002218 activation of innate immune response
2.04 2.70e-02 GO:0022613 ribonucleoprotein complex biogenesis
1.64 2.71e-02 GO:0070271 protein complex biogenesis
2.16 2.80e-02 GO:0031400 negative regulation of protein modification process
1.76 2.92e-02 GO:0006917 induction of apoptosis
1.65 3.55e-02 GO:0006325 chromatin organization
1.63 3.90e-02 GO:0006461 protein complex assembly
2.39 4.16e-02 GO:0016197 endosome transport
1.99 4.22e-02 GO:0071843 cellular component biogenesis at cellular level
1.73 4.22e-02 GO:0016568 chromatin modification
1.37 4.25e-02 GO:0009893 positive regulation of metabolic process
2.12 4.37e-02 GO:0006417 regulation of translation
2.58 4.48e-02 GO:0002224 toll-like receptor signaling pathway
2.88 4.58e-02 GO:0031124 mRNA 3'-end processing
2.88 4.58e-02 GO:0034138 toll-like receptor 3 signaling pathway
1.62 4.78e-02 GO:0001775 cell activation

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
1.22 3.63e-39 GO:0044424 intracellular part
1.21 2.42e-36 GO:0005622 intracellular
1.30 1.28e-31 GO:0005737 cytoplasm
1.22 1.66e-24 GO:0043229 intracellular organelle
1.22 2.33e-24 GO:0043226 organelle
1.24 2.27e-23 GO:0043227 membrane-bounded organelle
1.24 2.35e-23 GO:0043231 intracellular membrane-bounded organelle
1.71 6.42e-23 GO:0005829 cytosol
1.50 8.76e-23 GO:0032991 macromolecular complex
1.31 7.90e-19 GO:0044444 cytoplasmic part
1.32 1.32e-17 GO:0044446 intracellular organelle part
1.31 6.04e-17 GO:0005634 nucleus
1.31 1.79e-16 GO:0044422 organelle part
1.46 6.57e-15 GO:0043234 protein complex
1.55 1.97e-14 GO:0044428 nuclear part
1.51 1.65e-13 GO:0031974 membrane-enclosed lumen
1.58 2.16e-13 GO:0031981 nuclear lumen
1.51 3.48e-13 GO:0070013 intracellular organelle lumen
1.70 4.69e-13 GO:0005654 nucleoplasm
1.50 7.06e-13 GO:0043233 organelle lumen
1.07 7.17e-12 GO:0044464 cell part
1.07 7.58e-12 GO:0005623 cell
1.99 3.24e-09 GO:0030529 ribonucleoprotein complex
1.76 8.69e-08 GO:0044451 nucleoplasm part
1.31 6.44e-06 GO:0043228 non-membrane-bounded organelle
1.31 6.44e-06 GO:0043232 intracellular non-membrane-bounded organelle
3.60 8.15e-05 GO:0034708 methyltransferase complex
3.60 8.15e-05 GO:0035097 histone methyltransferase complex
1.75 2.47e-04 GO:0005768 endosome
5.30 1.62e-03 GO:0030530 heterogeneous nuclear ribonucleoprotein complex
2.01 1.68e-03 GO:0016604 nuclear body
1.90 2.06e-03 GO:0000323 lytic vacuole
1.90 2.06e-03 GO:0005764 lysosome
1.45 2.23e-03 GO:0005794 Golgi apparatus
8.18 4.36e-03 GO:0005885 Arp2/3 protein complex
1.28 5.88e-03 GO:0031090 organelle membrane
2.88 7.73e-03 GO:0000502 proteasome complex
1.57 8.72e-03 GO:0005694 chromosome
4.52 2.71e-02 GO:0031201 SNARE complex
1.74 2.86e-02 GO:0015629 actin cytoskeleton
1.71 2.95e-02 GO:0005773 vacuole
2.07 3.43e-02 GO:0005769 early endosome

Gene overrepresentation in function category:

enrichment   p-value GO term description
1.42 1.35e-49 GO:0005515 protein binding
1.17 7.38e-28 GO:0005488 binding
1.83 1.01e-10 GO:0003723 RNA binding
1.32 1.06e-04 GO:0000166 nucleotide binding
1.22 5.42e-03 GO:0003676 nucleic acid binding
3.49 6.73e-03 GO:0043021 ribonucleoprotein binding
3.34 2.39e-02 GO:0003823 antigen binding