hg19_v1_chr1_+_84647342_84647342	38.9768	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr20_+_11898536_11898579	38.9232	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg19_v1_chr4_-_176733413_176733470	36.1984	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg19_v1_chr3_+_39509069_39509170	32.924	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg19_v1_chr2_+_102508333_102508351	30.4701	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr1_-_32801606_32801856	29.3398	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chr2_-_2334887_2335044	26.7383	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr7_+_26400503_26400554	25.8972	SOX2.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chrX_+_123234462_123234598	25.8199	SOX2.p2	AK026678|STAG2|10735|stromal antigen 2
hg19_v1_chr1_-_26233367_26233367	23.6697	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chr15_+_52311408_52311431	23.2434	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr2_+_102508377_102508687	23.1233	SOX2.p2	BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr12_-_45307710_45307710	20.7964	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr4_+_166131170_166131187	20.4615	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr15_+_52311438_52311484	20.1874	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr15_+_52311432_52311436	20.0383	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr4_+_41258941_41259010	19.7871	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr7_+_94297448_94297456	19.5748	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr4_-_176733901_176733911	19.5048	SOX2.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg19_v1_chr1_+_50571963_50571963	19.1578	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr16_+_89989686_89989830	18.6307	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr6_+_123100645_123100753	18.1579	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr14_-_60097223_60097308	17.9936	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chr3_-_58563490_58563490	17.4713	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr6_+_114178516_114178953	17.3726	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr2_-_55199894_55199922	17.0076	SOX2.p2	
hg19_v1_chr1_+_87797371_87797459	16.723	SOX2.p2	BC065818|LMO4|8543|LIM domain only 4
hg19_v1_chr9_-_86584079_86584113	16.7068	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr7_+_149570004_149570080	16.6971	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg19_v1_chr3_-_58563070_58563149	16.5994	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr1_+_151032866_151032873	16.3475	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr12_-_16759531_16759536	16.1782	SOX2.p2	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr18_-_74728963_74729028	16.1612	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr1_+_151032880_151032893	16.148	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr18_-_74729049_74729086	16.088	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg19_v1_chr4_+_41258909_41258928	15.9418	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr4_+_41258895_41258897	15.8363	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr17_-_1248346_1248366	15.8268	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr15_+_80364902_80364950	15.3026	SOX2.p2	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6	AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6	AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr12_-_16759430_16759432	15.2445	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr7_-_111846384_111846540	15.1701	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr17_-_42992852_42992919	15.1472	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr1_+_151032683_151032861	15.1296	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr1_-_85930610_85930640	15.0981	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr4_-_83347222_83347249	14.8517	SOX2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr19_-_6502224_6502411	14.7946	SOX2.p2	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa	EU831895|TUBB4A|10382|tubulin, beta 4A class IVa	BC006570|TUBB4A|10382|tubulin, beta 4A class IVa	AK095202|TUBB4A|10382|tubulin, beta 4A class IVa	AK295917|TUBB4A|10382|tubulin, beta 4A class IVa	AK075307|TUBB4A|10382|tubulin, beta 4A class IVa	BC013683|TUBB4A|10382|tubulin, beta 4A class IVa	NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa	AK293503|TUBB4A|10382|tubulin, beta 4A class IVa
hg19_v1_chr16_+_89988416_89988416	14.6924	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3 class III	NM_001197181|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr8_+_80523351_80523367	14.5557	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2
hg19_v1_chr12_-_16757944_16758080	14.5396	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr16_+_58534045_58534152	14.4859	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr2_+_181845605_181845681	14.4551	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr2_-_26205437_26205444	14.2319	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr2_-_26205327_26205367	13.7452	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr8_+_80523048_80523048	13.7153	SOX2.p2	NM_001199214|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2
hg19_v1_chr1_-_95392501_95392780	13.4311	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg19_v1_chr5_+_140213968_140213968	13.3693	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg19_v1_chr8_+_80523376_80523431	13.3244	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg19_v1_chr12_+_120933911_120933915	13.3154	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr5_+_36606667_36606790	13.1569	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr15_-_83876769_83876824	13.0715	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chrX_+_80457302_80457504	13.0649	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr14_-_60097314_60097374	13.05	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr1_-_86043932_86044049	12.9563	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr6_+_121756744_121756906	12.8366	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chrX_-_13835187_13835203	12.7946	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr5_+_36606456_36606456	12.7705	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr2_+_181845803_181845852	12.7606	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chrX_-_13835012_13835171	12.6076	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr12_-_118498893_118498977	12.5815	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg19_v1_chr8_+_80523304_80523313	12.4859	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg19_v1_chr3_+_238274_238289	12.4613	SOX2.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr5_+_140739589_140739702	12.1856	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr8_+_80523339_80523339	12.1302	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg19_v1_chr9_+_71819926_71820077	12.0545	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg19_v1_chr1_+_155853546_155853601	11.9529	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg19_v1_chr12_-_49582800_49582865	11.9296	SOX2.p2	BC006468|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr2_+_149633173_149633186	11.9129	SOX2.p2	
hg19_v1_chr1_-_51887740_51887792	11.8274	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr1_+_50574601_50574768	11.7377	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr17_-_37764165_37764181	11.7016	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg19_v1_chr5_+_140254930_140255057	11.686	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12	HQ258507|PCDHA12|56137|protocadherin alpha 12
hg19_v1_chr1_+_50574589_50574594	11.5803	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr4_-_74088773_74088786	11.5716	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg19_v1_chr2_-_200325200_200325283	11.5407	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr5_+_140186658_140186772	11.5252	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4	HQ258500|PCDHA4|56144|protocadherin alpha 4
hg19_v1_chr6_-_128841432_128841881	11.3957	SOX2.p2	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K
hg19_v1_chr12_+_120933832_120933903	11.3848	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr16_+_58497548_58497612	11.3614	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr10_+_11207053_11207140	11.242	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr16_+_58497628_58497648	11.2359	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr8_-_80993009_80993050	11.2346	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr6_-_46293404_46293410	10.9971	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chrX_-_13835313_13835318	10.9151	SOX2.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr2_+_169312793_169312958	10.848	SOX2.p2	NM_203463|CERS6|253782|ceramide synthase 6	BC109284|CERS6|253782|ceramide synthase 6	BC109285|CERS6|253782|ceramide synthase 6
hg19_v1_chr6_+_119215240_119215577	10.6122	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chrX_+_100333835_100333871	10.5169	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg19_v1_chrX_-_138287180_138287215	10.4853	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr1_-_95392449_95392498	10.4764	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg19_v1_chr8_-_102803178_102803188	10.3336	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chrX_+_80457597_80457699	10.3212	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chrX_-_13835213_13835231	10.2935	SOX2.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg19_v1_chr1_-_156217717_156217863	10.2821	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI
hg19_v1_chr4_+_158141735_158142034	10.2222	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr2_-_225370687_225370770	10.2077	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg19_v1_chr4_-_87028805_87028805	10.1977	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr8_-_102803196_102803204	10.1937	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr11_-_123524881_123525042	10.0409	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr14_-_60097531_60097536	10.0296	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr6_+_123100860_123100939	9.99556	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr5_-_88199868_88199921	9.9643	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr7_+_154002194_154002577	9.85952	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr6_+_30688085_30688141	9.75226	SOX2.p2	AK303227|TUBB|203068|tubulin, beta class I	BC020946|TUBB|203068|tubulin, beta class I	AK297638|TUBB|203068|tubulin, beta class I	AK098772|TUBB|203068|tubulin, beta class I	AK316265|TUBB|203068|tubulin, beta class I	BC103746|TUBB|203068|tubulin, beta class I	AF070600|TUBB|203068|tubulin, beta class I	AF141349|TUBB|203068|tubulin, beta class I	BC070326|TUBB|203068|tubulin, beta class I
hg19_v1_chr11_-_117747331_117747447	9.72205	SOX2.p2	AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6	AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6	AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr17_-_29624249_29624379	9.6271	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg19_v1_chr15_-_64995346_64995374	9.61611	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr15_+_91643181_91643238	9.58726	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg19_v1_chr8_-_18666295_18666404	9.57127	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr12_+_49212253_49212314	9.55431	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg19_v1_chr4_-_176734181_176734181	9.52305	SOX2.p2	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg19_v1_chr1_-_149900143_149900235	9.50548	SOX2.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr15_+_84115979_84116141	9.47379	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr10_+_11206928_11207010	9.41248	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr22_-_50523853_50524033	9.40841	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr1_+_87794576_87794787	9.3881	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr12_-_16758839_16758903	9.28653	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr5_-_32388687_32388762	9.1521	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr13_-_24007822_24007859	9.10304	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr1_+_244216506_244216581	9.08577	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg19_v1_chr5_+_71502700_71502827	9.03899	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr8_+_26435920_26435934	9.01388	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr2_+_102314162_102314542	8.97063	SOX2.p2	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr13_-_53422773_53422778	8.94501	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8
hg19_v1_chr12_+_69979447_69979652	8.84084	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr1_+_163038564_163038763	8.83969	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr5_+_36608430_36608563	8.8194	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr1_+_163038934_163039274	8.79112	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr5_-_111091947_111091947	8.79061	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr21_-_32931289_32931427	8.78314	SOX2.p2	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg19_v1_chr4_-_87281374_87281374	8.53992	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr5_+_140749830_140749961	8.52217	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr2_-_55277592_55277614	8.50877	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg19_v1_chr19_-_42806460_42806861	8.44413	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr4_+_41614911_41614927	8.42474	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr11_-_10830581_10830672	8.38308	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr19_-_42806928_42806954	8.36771	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr12_+_120933916_120933953	8.3441	SOX2.p2	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr5_+_137673223_137673286	8.31254	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr2_+_10262853_10262925	8.31227	SOX2.p2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr2_-_55277421_55277441	8.29417	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg19_v1_chr4_-_83347778_83347787	8.21788	SOX2.p2	AK057480|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr5_-_146435589_146435699	8.18666	SOX2.p2	BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr1_+_244214576_244214591	8.17981	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chr4_-_83350548_83350618	8.17825	SOX2.p2	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr2_-_74601653_74601861	8.17467	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg19_v1_chr5_+_65372744_65372866	8.14022	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr15_+_57210972_57211029	8.12989	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg19_v1_chrX_+_51927918_51928036	8.00513	SOX2.p2	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr2_-_55277672_55277693	7.9369	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg19_v1_chr18_-_21852189_21852195	7.93471	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr5_-_11903964_11904109	7.92633	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr5_-_32388595_32388645	7.89765	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr2_+_10262694_10262824	7.89055	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr15_+_65822842_65823005	7.88345	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr1_-_110283659_110283659	7.87327	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg19_v1_chr2_-_55277620_55277634	7.82197	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg19_v1_chr2_-_55277653_55277671	7.81262	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg19_v1_chr21_+_18885104_18885223	7.78189	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr5_+_140797243_140797259	7.77081	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr4_+_113970784_113970884	7.7119	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr7_-_47621635_47621692	7.70939	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg19_v1_chr5_-_16936371_16936400	7.67556	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg19_v1_chr15_+_22892683_22892695	7.67423	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr11_-_72380107_72380107	7.66392	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr5_+_65222381_65222437	7.61488	SOX2.p2	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_001253697|ERBB2IP|55914|erbb2 interacting protein	NM_001253698|ERBB2IP|55914|erbb2 interacting protein	NM_001253699|ERBB2IP|55914|erbb2 interacting protein	NM_001253701|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AF263744|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chrX_-_51812249_51812367	7.58589	SOX2.p2	BC063838|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr11_-_117166247_117166385	7.5576	SOX2.p2	AB177847|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296015|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296535|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207048|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207049|BACE1|23621|beta-site APP-cleaving enzyme 1
hg19_v1_chr2_-_175869910_175870116	7.54286	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chr2_+_62934030_62934031	7.52355	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg19_v1_chr6_+_30688144_30688304	7.51536	SOX2.p2	BC002347|TUBB|203068|tubulin, beta class I	BC007605|TUBB|203068|tubulin, beta class I	AB062393|TUBB|203068|tubulin, beta class I	BC001938|TUBB|203068|tubulin, beta class I	BC005838|TUBB|203068|tubulin, beta class I	AF070561|TUBB|203068|tubulin, beta class I	AF070593|TUBB|203068|tubulin, beta class I	BC013374|TUBB|203068|tubulin, beta class I	NM_178014|TUBB|203068|tubulin, beta class I	BC021909|TUBB|203068|tubulin, beta class I	BC019924|TUBB|203068|tubulin, beta class I	BC062532|TUBB|203068|tubulin, beta class I	AK297489|TUBB|203068|tubulin, beta class I	DQ891742|TUBB|203068|tubulin, beta class I	DQ891828|TUBB|203068|tubulin, beta class I	DQ894920|TUBB|203068|tubulin, beta class I	V00599|TUBB|203068|tubulin, beta class I
hg19_v1_chr4_-_76598289_76598344	7.48361	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr5_+_140797270_140797426	7.47333	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr2_-_55277698_55277733	7.46853	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr18_+_29171729_29171865	7.44163	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	GU727633|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg19_v1_chr5_-_146460991_146461053	7.43743	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr11_-_10830452_10830503	7.37126	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr2_-_55277459_55277586	7.34238	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg19_v1_chr6_-_75965845_75965927	7.32046	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr6_-_79944397_79944454	7.31372	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr6_-_79944324_79944392	7.25284	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr3_+_159557745_159557973	7.23756	SOX2.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr10_-_62332666_62332715	7.21978	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr15_+_22892714_22892719	7.18941	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr7_-_47621741_47621825	7.18714	SOX2.p2	AK092864|TNS3|64759|tensin 3	NM_022748|TNS3|64759|tensin 3
hg19_v1_chr1_-_177133950_177134023	7.14075	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg19_v1_chr12_-_45270071_45270139	7.14018	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr2_-_166060552_166060603	7.13598	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr15_+_22892699_22892708	7.12648	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr16_+_6069094_6069356	7.11252	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v1_chr22_-_50523737_50523742	7.10253	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr15_+_22892723_22892751	7.09463	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr12_-_16759733_16759733	7.0737	SOX2.p2	BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr7_-_137028533_137028577	7.05987	SOX2.p2	BC005916|PTN|5764|pleiotrophin	NM_002825|PTN|5764|pleiotrophin	M57399|PTN|5764|pleiotrophin
hg19_v1_chr7_+_73703704_73703871	7.03746	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg19_v1_chr3_+_159557649_159557738	7.02273	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr4_-_76598611_76598693	7.01852	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr11_+_112831968_112832006	7.01305	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_001242607|NCAM1|4684|neural cell adhesion molecule 1	NM_001242608|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr1_-_43637969_43638240	7.00319	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg19_v1_chr4_+_83351725_83351764	7.00058	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr15_-_83876165_83876664	6.99347	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr4_+_83351765_83351814	6.97146	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr3_+_172472246_172472359	6.96936	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr5_+_67588395_67588510	6.96666	SOX2.p2	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr8_-_110693233_110693233	6.95165	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr1_-_177133818_177133833	6.91885	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg19_v1_chr4_-_83350829_83351248	6.91826	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr4_+_146403955_146403962	6.89782	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg19_v1_chr5_+_161277702_161277816	6.86457	SOX2.p2	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr7_-_137028275_137028331	6.86388	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg19_v1_chr21_+_18885296_18885447	6.86359	SOX2.p2	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr7_+_56119466_56119566	6.86299	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr3_-_42305438_42305438	6.8327	SOX2.p2	BC008283|CCK|885|cholecystokinin	NM_001174138|CCK|885|cholecystokinin
hg19_v1_chr2_-_48132656_48132931	6.79525	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg19_v1_chr4_+_115543522_115543522	6.7545	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg19_v1_chr12_+_120907599_120907691	6.7542	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr9_+_103204187_103204220	6.73857	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr21_-_27512668_27512777	6.71925	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr7_+_56119377_56119435	6.67422	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr10_+_102106771_102106912	6.66753	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chr3_-_33700932_33701071	6.64531	SOX2.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr12_-_121785652_121785683	6.58419	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg19_v1_chr19_-_14260728_14260872	6.57084	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg19_v1_chr21_+_37442221_37442285	6.565	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1
hg19_v1_chr15_+_43885251_43885293	6.55793	SOX2.p2	NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B	AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A
hg19_v1_chr7_-_104909442_104909525	6.54318	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr22_-_50523780_50523829	6.52545	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr10_+_102123420_102123604	6.51756	SOX2.p2	
hg19_v1_chr3_+_130569368_130569444	6.50646	SOX2.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chr7_-_26232148_26232154	6.50358	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr5_+_140864626_140864743	6.48842	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg19_v1_chr1_-_226926875_226927002	6.48561	SOX2.p2	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B
hg19_v1_chr6_+_52935770_52935770	6.47853	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg19_v1_chr2_-_74607425_74607481	6.4757	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg19_v1_chr12_-_54653369_54653373	6.47045	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chr1_-_149889362_149889446	6.42948	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr21_+_37442298_37442413	6.41676	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr1_+_84630014_84630064	6.41621	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr1_+_84630374_84630386	6.4028	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr1_+_6845381_6845601	6.3853	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg19_v1_chr5_+_132406080_132406126	6.37267	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr1_+_145883867_145883867	6.34266	SOX2.p2	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C
hg19_v1_chrX_+_21958714_21958938	6.33851	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chr22_-_36236421_36236629	6.33798	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr2_-_122159140_122159171	6.32519	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr22_-_50524357_50524357	6.3141	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chrX_+_118714297_118714297	6.31089	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A
hg19_v1_chr5_+_140729723_140729827	6.30137	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr20_+_44036940_44037106	6.29386	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr12_-_54653317_54653332	6.27528	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr20_+_44036628_44036628	6.27229	SOX2.p2	NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr15_+_65822738_65822840	6.2402	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr1_+_84630575_84630648	6.23508	SOX2.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr7_-_137028433_137028449	6.21505	SOX2.p2	X52946|PTN|5764|pleiotrophin	AK313424|PTN|5764|pleiotrophin
hg19_v1_chr17_+_65822242_65822257	6.19971	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr14_+_67656109_67656177	6.17013	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg19_v1_chr16_+_56815703_56815767	6.12283	SOX2.p2	NM_001242795|NUP93|9688|nucleoporin 93kDa	AK056637|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr14_-_105261850_105261895	6.09327	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr22_-_36236264_36236318	6.07737	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr12_-_16759939_16760083	6.06429	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr7_+_16793320_16793592	6.06238	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg19_v1_chr15_+_66694216_66694219	6.00554	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg19_v1_chr16_-_47005339_47005358	5.99728	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v1_chr14_-_95608054_95608054	5.98296	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr10_+_81073763_81073916	5.98206	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg19_v1_chr2_-_55276288_55276333	5.98024	SOX2.p2	AK302741|RTN4|57142|reticulon 4	AF333336|RTN4|57142|reticulon 4	NM_207521|RTN4|57142|reticulon 4	AY123248|RTN4|57142|reticulon 4
hg19_v1_chr16_+_15528324_15528477	5.97868	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chr5_-_32403310_32403396	5.97395	SOX2.p2	BC062986|ZFR|51663|zinc finger RNA binding protein	BC051893|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr1_+_244214552_244214560	5.96307	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr22_-_36236330_36236351	5.95794	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr17_+_65822206_65822229	5.9408	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr13_-_31040035_31040081	5.9357	SOX2.p2	AK057120|HMGB1|3146|high mobility group box 1	AK310975|HMGB1|3146|high mobility group box 1	AK291494|HMGB1|3146|high mobility group box 1	AK304506|HMGB1|3146|high mobility group box 1	NM_002128|HMGB1|3146|high mobility group box 1
hg19_v1_chr17_+_16945766_16946162	5.93052	SOX2.p2	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg19_v1_chrX_-_135962872_135962916	5.88738	SOX2.p2	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr22_-_42336222_42336222	5.86151	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chr18_+_55888750_55888774	5.84696	SOX2.p2	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr9_+_91003987_91004010	5.82596	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chr11_-_10830299_10830450	5.79235	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr9_-_8733893_8733945	5.77276	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr20_-_45985411_45985566	5.76029	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr8_+_79428335_79428335	5.75873	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v1_chr1_-_183387501_183387736	5.74774	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg19_v1_chr6_+_87969619_87969709	5.74638	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg19_v1_chr20_-_50384899_50384957	5.74094	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr9_+_103235489_103235519	5.7328	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr1_-_156399183_156399370	5.71871	SOX2.p2	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61	U49857|C1orf61|10485|chromosome 1 open reading frame 61	BC059943|C1orf61|10485|chromosome 1 open reading frame 61	BC107686|C1orf61|10485|chromosome 1 open reading frame 61	BC050448|C1orf61|10485|chromosome 1 open reading frame 61	AK095626|C1orf61|10485|chromosome 1 open reading frame 61	BC054045|C1orf61|10485|chromosome 1 open reading frame 61
hg19_v1_chr4_+_114214102_114214137	5.71525	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr8_+_85095702_85095768	5.68552	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr1_-_115269672_115269687	5.68543	SOX2.p2	AK130392|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr10_-_98336445_98336573	5.67728	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr6_-_24583454_24583454	5.66043	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr5_+_137514416_137514416	5.65554	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr1_-_70671160_70671261	5.6549	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg19_v1_chr5_+_162930230_162930347	5.6513	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta
hg19_v1_chr5_+_156820161_156820216	5.61162	SOX2.p2	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr10_+_111969988_111969988	5.57747	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg19_v1_chr3_+_115342150_115342150	5.57627	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43
hg19_v1_chr19_+_50354417_50354643	5.5744	SOX2.p2	AJ617480|PTOV1|53635|prostate tumor overexpressed 1	BC042921|PTOV1|53635|prostate tumor overexpressed 1	U79287|PTOV1|53635|prostate tumor overexpressed 1
hg19_v1_chr5_-_78809658_78809699	5.57244	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg19_v1_chr12_-_16758312_16758338	5.56995	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr18_-_74728677_74728836	5.56649	SOX2.p2	AK074315|MBP|4155|myelin basic protein
hg19_v1_chr5_+_125800786_125800846	5.56395	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr12_-_45269953_45270001	5.55049	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr8_+_85095452_85095466	5.55021	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr17_-_20946088_20946457	5.54582	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg19_v1_chr3_-_25705719_25706231	5.53811	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg19_v1_chr8_+_107460151_107460151	5.53542	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr4_-_139163222_139163506	5.52536	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr5_+_137514753_137514878	5.4995	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr7_-_99698278_99698385	5.48707	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr2_-_50574891_50574953	5.46829	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg19_v1_chr11_+_16760147_16760173	5.41606	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg19_v1_chr10_+_95517565_95517727	5.40676	SOX2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg19_v1_chr20_+_60718473_60719049	5.39114	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v1_chr20_-_50384861_50384895	5.38001	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr4_+_146031528_146031573	5.37813	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg19_v1_chr4_+_88896838_88896866	5.36992	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr10_-_98325100_98325183	5.35413	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr17_-_1083008_1083130	5.3472	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg19_v1_chr2_+_109384601_109384766	5.32519	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg19_v1_chrX_+_150151757_150151857	5.32246	SOX2.p2	BX537505|HMGB3|3149|high mobility group box 3	NM_005342|HMGB3|3149|high mobility group box 3	Y10043|HMGB3|3149|high mobility group box 3	BC070482|HMGB3|3149|high mobility group box 3
hg19_v1_chr12_+_48516428_48516562	5.31366	SOX2.p2	D21861|PFKM|5213|phosphofructokinase, muscle	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg19_v1_chr12_+_110906203_110906415	5.30058	SOX2.p2	AK296280|C12orf24|29902|chromosome 12 open reading frame 24	AK297684|C12orf24|29902|chromosome 12 open reading frame 24	NM_013300|C12orf24|29902|chromosome 12 open reading frame 24	AK225731|C12orf24|29902|chromosome 12 open reading frame 24	U79274|C12orf24|29902|chromosome 12 open reading frame 24	BC020967|C12orf24|29902|chromosome 12 open reading frame 24
hg19_v1_chr1_+_81771844_81772011	5.29438	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr1_+_166808721_166808770	5.28975	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr15_-_64995459_64995479	5.2896	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr5_+_140165875_140165875	5.26567	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr20_+_57470200_57470251	5.25761	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg19_v1_chrX_-_135962929_135962942	5.23715	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr4_+_39699663_39699946	5.20654	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K
hg19_v1_chr4_+_71587674_71587767	5.19015	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr7_+_5632453_5632567	5.18052	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr11_+_60691911_60691959	5.14998	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg19_v1_chr2_-_86564632_86564835	5.14352	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg19_v1_chr11_-_62475060_62475178	5.08608	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr12_+_79439432_79439471	5.07995	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg19_v1_chr5_-_88119604_88119743	5.06531	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr4_+_41540320_41540334	5.05033	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr2_+_181845368_181845372	5.04025	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr7_+_55433140_55433140	5.03794	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr12_-_90049818_90049884	5.03509	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg19_v1_chr4_+_41540187_41540224	5.02441	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr1_+_116925991_116925991	5.01053	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg19_v1_chr2_+_181845088_181845363	4.99364	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr11_-_62472901_62472984	4.97664	SOX2.p2	
hg19_v1_chr9_-_88715024_88715145	4.9725	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg19_v1_chr7_+_56119439_56119461	4.95065	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr4_+_156680125_156680283	4.95031	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr8_+_85095501_85095585	4.9233	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr10_-_123356158_123356158	4.88722	SOX2.p2	AK294026|FGFR2|2263|fibroblast growth factor receptor 2	NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2
hg19_v1_chr7_-_137028370_137028376	4.88137	SOX2.p2	AK290488|PTN|5764|pleiotrophin
hg19_v1_chr7_+_5632435_5632441	4.86829	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr11_+_63754300_63754327	4.86801	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr1_+_200708604_200708738	4.83888	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr6_-_131291480_131291622	4.8311	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr15_+_80696569_80696899	4.7909	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chr7_-_131241321_131241405	4.78435	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg19_v1_chr15_-_64995388_64995416	4.78159	SOX2.p2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr8_+_1952875_1952941	4.74359	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg19_v1_chr21_-_27107959_27107983	4.7399	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v1_chr7_-_37025696_37025745	4.73813	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr11_+_129991582_129991674	4.70578	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr5_+_86563594_86563777	4.70411	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr13_+_52598678_52598826	4.69584	SOX2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v1_chr14_-_45603668_45603745	4.68027	SOX2.p2	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chr12_-_71148331_71148370	4.66093	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr6_-_86351156_86351168	4.65646	SOX2.p2	AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v1_chr6_+_111135823_111135843	4.65489	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg19_v1_chr4_+_88896801_88896819	4.65444	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr20_+_17206751_17206751	4.65072	SOX2.p2	BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr7_-_47622127_47622246	4.6474	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg19_v1_chrX_-_110655384_110655459	4.63657	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr1_+_110560111_110560144	4.62964	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr1_+_120254418_120254645	4.62886	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr20_-_20036685_20036689	4.61378	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg19_v1_chr9_-_34620483_34620488	4.61246	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr12_-_16760935_16761147	4.59787	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr15_-_37393364_37393521	4.58542	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_001220482|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg19_v1_chr12_+_69979268_69979286	4.56468	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr5_+_102465256_102465293	4.54954	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg19_v1_chr4_+_88896899_88896928	4.54637	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr2_-_86422892_86422892	4.5376	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr12_-_71148383_71148538	4.52352	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr12_-_45270157_45270246	4.51026	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr5_-_111092918_111092954	4.48986	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr9_-_34620460_34620482	4.48421	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr8_+_11660272_11660291	4.48219	SOX2.p2	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr11_+_111807857_111807960	4.48085	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr1_-_151431892_151431970	4.46867	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg19_v1_chr5_+_132428394_132428412	4.39407	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr1_-_153643456_153643471	4.39284	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr7_+_153584383_153584418	4.38505	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr11_+_118889140_118889240	4.38375	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr20_-_43150592_43150672	4.3832	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg19_v1_chr12_+_69979202_69979247	4.37959	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr5_+_140220811_140220906	4.3748	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg19_v1_chr1_+_110543548_110543548	4.36076	SOX2.p2	NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr11_-_3013577_3013622	4.35153	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr13_-_31039966_31040021	4.34967	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr1_-_153606567_153606567	4.34929	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr1_-_225840660_225840915	4.33791	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg19_v1_chr22_+_19711065_19711070	4.29243	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg19_v1_chr1_-_43855448_43855454	4.28036	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg19_v1_chr17_+_3377346_3377403	4.2581	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr1_-_153643433_153643454	4.25418	SOX2.p2	U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr10_+_6244839_6244913	4.25398	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v1_chr9_+_91926109_91926207	4.24763	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr8_+_11660297_11660341	4.24324	SOX2.p2	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chrX_+_107288199_107288320	4.23685	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chr9_-_36375965_36376036	4.21218	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg19_v1_chr1_-_153643474_153643506	4.20353	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr2_-_44586854_44586887	4.19137	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr3_+_115342302_115342536	4.19069	SOX2.p2	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg19_v1_chr17_-_56065596_56065640	4.17254	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr18_-_21891469_21891469	4.17072	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr1_-_21503304_21503344	4.15005	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr12_+_52347163_52347163	4.13211	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg19_v1_chrX_+_70503041_70503041	4.12514	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr15_-_34659245_34659915	4.12253	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr2_-_86422591_86422720	4.10963	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr21_+_41239346_41239408	4.09931	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg19_v1_chr1_-_153643417_153643427	4.099	SOX2.p2	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr4_-_24586015_24586137	4.05266	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr12_-_71148063_71148236	4.05239	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chrX_+_51636608_51636798	4.04609	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg19_v1_chr11_-_18548363_18548502	4.03693	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg19_v1_chr20_-_2641476_2641596	4.02376	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr8_-_27115935_27115980	4.02098	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chrX_-_20159757_20159995	4.00006	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg19_v1_chr17_+_18768781_18768861	3.99376	SOX2.p2	NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v1_chr1_-_153643428_153643432	3.98365	SOX2.p2	BC000382|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr18_-_24445652_24445781	3.97884	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4	HQ901095|AQP4|361|aquaporin 4
hg19_v1_chr17_+_66031814_66031866	3.96336	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr5_+_10353980_10354037	3.95741	SOX2.p2	
hg19_v1_chr22_+_31795538_31795576	3.956	SOX2.p2	NM_004147|DRG1|4733|developmentally regulated GTP binding protein 1
hg19_v1_chr4_-_24586145_24586175	3.94461	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr1_-_243418675_243418707	3.94353	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr1_-_182357871_182357935	3.94153	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr3_+_123813527_123813684	3.92524	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chr11_-_72385411_72385496	3.9193	SOX2.p2	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr12_-_57704245_57704245	3.91756	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg19_v1_chr12_-_106532447_106532918	3.91395	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr5_-_111092865_111092908	3.90455	SOX2.p2	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr3_+_133494275_133494277	3.90131	SOX2.p2	U88581|TF|7018|transferrin
hg19_v1_chr19_+_11071792_11071856	3.8994	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr14_+_52456322_52456357	3.89939	SOX2.p2	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr11_-_70672644_70672714	3.89301	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg19_v1_chr10_-_61900659_61900773	3.86891	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr16_+_56817367_56817412	3.84985	SOX2.p2	AK294176|NUP93|9688|nucleoporin 93kDa	NM_001242796|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr14_-_45603658_45603667	3.84272	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chr5_-_138210992_138211035	3.84149	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr10_+_11047274_11047297	3.83019	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr4_+_41614933_41615091	3.82443	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr10_-_735522_735861	3.82194	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v1_chr7_+_94292737_94292755	3.81809	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chr22_+_21271721_21271722	3.81231	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr2_-_151344145_151344183	3.80168	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg19_v1_chr16_+_57673206_57673429	3.79623	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg19_v1_chr8_-_102803438_102803438	3.78287	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chrX_+_80457559_80457593	3.76001	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr2_-_86422504_86422590	3.74252	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr10_+_123923104_123923358	3.73737	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr1_-_179833581_179833588	3.73161	SOX2.p2	
hg19_v1_chr11_-_14386051_14386051	3.7298	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr15_-_56209305_56209328	3.71563	SOX2.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg19_v1_chr9_-_34620489_34620497	3.7001	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr11_+_118889427_118889482	3.6885	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr19_+_34710327_34710434	3.65043	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v1_chr18_+_657461_657632	3.64467	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr15_+_57210852_57210885	3.64361	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg19_v1_chr12_+_12869818_12870435	3.63764	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v1_chr1_+_47799622_47799660	3.62828	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v1_chr18_+_56530677_56531034	3.62404	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr19_+_35782988_35783096	3.61598	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr4_-_87281177_87281215	3.59973	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr3_+_19988530_19988849	3.58048	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr7_+_142560512_142560518	3.5634	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg19_v1_chr5_-_176900591_176900650	3.54734	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg19_v1_chr10_+_11047253_11047262	3.52996	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr5_-_114515733_114516242	3.52848	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg19_v1_chr20_-_43150686_43150729	3.52491	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg19_v1_chr8_+_42195972_42196142	3.52136	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr1_+_87794548_87794570	3.51541	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg19_v1_chr9_-_36276930_36277052	3.50289	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg19_v1_chr1_+_150039341_150039438	3.49354	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr6_+_39760772_39760865	3.4927	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg19_v1_chr8_+_54764367_54764459	3.48843	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr6_-_13814546_13814990	3.48693	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg19_v1_chr20_+_30326903_30327171	3.47635	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg19_v1_chr17_-_27467395_27467428	3.47565	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg19_v1_chr1_-_36097137_36097137	3.47421	SOX2.p2	AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2
hg19_v1_chr8_-_93029864_93029907	3.4673	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr20_-_49547451_49547996	3.4624	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg19_v1_chr2_+_210444364_210444424	3.45292	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chrX_-_10645726_10645787	3.42986	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr1_+_183605207_183605477	3.4286	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr5_-_150284429_150284464	3.42019	SOX2.p2	AK300528|ZNF300|91975|zinc finger protein 300
hg19_v1_chr11_-_115088628_115088669	3.41963	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr15_-_23932364_23932396	3.41763	SOX2.p2	
hg19_v1_chr1_-_21377387_21377394	3.40095	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr11_-_134281725_134281917	3.38555	SOX2.p2	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v1_chr14_-_55650348_55650465	3.38375	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg19_v1_chr7_-_143059144_143059172	3.38123	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr1_-_21503352_21503388	3.37621	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr17_-_62657997_62658138	3.37599	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr2_+_201676597_201676632	3.37526	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr12_+_64803741_64803815	3.37065	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg19_v1_chr14_+_104029278_104029344	3.37026	SOX2.p2	NM_032374|APOPT1|84334|apoptogenic 1	AK223092|APOPT1|84334|apoptogenic 1	AK223103|APOPT1|84334|apoptogenic 1	BC007412|APOPT1|84334|apoptogenic 1
hg19_v1_chr2_-_73964427_73964516	3.35876	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg19_v1_chr14_+_35761604_35761682	3.35781	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v1_chr5_+_177631534_177631610	3.35681	SOX2.p2	AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B
hg19_v1_chr17_-_29648631_29648766	3.35602	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg19_v1_chr6_-_47253962_47254003	3.34867	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr5_+_34687663_34687663	3.34682	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr19_+_11071713_11071718	3.34626	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr17_+_38375554_38375674	3.34009	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg19_v1_chr9_+_103235634_103235825	3.32956	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr5_+_138211084_138211099	3.3267	SOX2.p2	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr1_+_50569581_50569581	3.31352	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr1_+_50575465_50575612	3.31168	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr19_+_11071719_11071781	3.31152	SOX2.p2	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr2_+_201676644_201676648	3.30993	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr12_+_7045437_7045476	3.3075	SOX2.p2	
hg19_v1_chr19_+_11071583_11071709	3.28642	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr1_-_31345361_31345435	3.27397	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg19_v1_chr8_+_11660179_11660189	3.26834	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr8_-_17579729_17579729	3.26662	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr14_+_90863302_90863345	3.25928	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr4_+_146402704_146403061	3.24897	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg19_v1_chr22_+_31795581_31795669	3.24166	SOX2.p2	AK315659|DRG1|4733|developmentally regulated GTP binding protein 1	BC019285|DRG1|4733|developmentally regulated GTP binding protein 1	AJ005940|DRG1|4733|developmentally regulated GTP binding protein 1	BC020803|DRG1|4733|developmentally regulated GTP binding protein 1	AF078103|DRG1|4733|developmentally regulated GTP binding protein 1	AK098576|DRG1|4733|developmentally regulated GTP binding protein 1	CR456488|DRG1|4733|developmentally regulated GTP binding protein 1	DQ890690|DRG1|4733|developmentally regulated GTP binding protein 1	DQ893872|DRG1|4733|developmentally regulated GTP binding protein 1	CU013048|DRG1|4733|developmentally regulated GTP binding protein 1	CU013336|DRG1|4733|developmentally regulated GTP binding protein 1	BT007237|DRG1|4733|developmentally regulated GTP binding protein 1	CR542059|DRG1|4733|developmentally regulated GTP binding protein 1
hg19_v1_chr2_+_201676659_201676662	3.23055	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr9_-_91793681_91793739	3.22822	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr6_+_56954978_56954984	3.22136	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg19_v1_chr22_-_43343046_43343046	3.21974	SOX2.p2	BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2
hg19_v1_chr22_+_21271723_21271939	3.21927	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr3_-_25683825_25683851	3.21867	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg19_v1_chr11_-_71781091_71781137	3.20848	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chrX_+_47092264_47092361	3.17668	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr13_-_45150391_45150470	3.17256	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr21_-_35288027_35288157	3.16969	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v1_chr3_+_19988861_19988941	3.16917	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr11_-_3013479_3013521	3.15683	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr17_+_30814552_30814643	3.14393	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr5_-_150284390_150284406	3.14346	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg19_v1_chr13_+_97794050_97794115	3.14182	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr17_+_11924116_11924247	3.1278	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg19_v1_chr5_-_150284293_150284373	3.10669	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg19_v1_chr3_+_193310921_193310989	3.09157	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr11_-_111782447_111782539	3.08922	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg19_v1_chr1_+_153606550_153606574	3.08777	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr3_+_9476506_9476527	3.08597	SOX2.p2	
hg19_v1_chr15_-_23932410_23932455	3.08098	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)
hg19_v1_chr5_+_159848876_159848931	3.07472	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr14_+_24540742_24540797	3.06847	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg19_v1_chr1_+_47799488_47799617	3.06427	SOX2.p2	BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v1_chr11_+_62475165_62475184	3.05336	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg19_v1_chr14_+_105941061_105941199	3.03944	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg19_v1_chr2_+_201676774_201677130	3.03618	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1	AK297227|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr7_-_44887697_44887756	3.02543	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg19_v1_chr14_+_52456192_52456317	3.02482	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr5_+_159848835_159848873	3.02271	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr22_+_31366662_31366813	3.01991	SOX2.p2	
hg19_v1_chr3_+_193310997_193311138	3.01956	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr5_+_140771482_140771482	3.00821	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr6_-_136788012_136788012	3.00355	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr5_-_140700339_140700365	3.00345	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr5_-_150284503_150284544	2.99186	SOX2.p2	AK096465|ZNF300|91975|zinc finger protein 300	NM_001172831|ZNF300|91975|zinc finger protein 300	NM_001172832|ZNF300|91975|zinc finger protein 300	NM_052860|ZNF300|91975|zinc finger protein 300
hg19_v1_chr18_-_25757351_25757444	2.98458	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr17_-_38821286_38821415	2.98293	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr15_-_45670955_45670979	2.9788	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v1_chr15_-_59225766_59225798	2.96795	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr7_+_100728719_100728802	2.96655	SOX2.p2	BC005847|TRIM56|81844|tripartite motif containing 56	BC048194|TRIM56|81844|tripartite motif containing 56	NM_030961|TRIM56|81844|tripartite motif containing 56	BC011882|TRIM56|81844|tripartite motif containing 56
hg19_v1_chr20_+_17207669_17207674	2.96352	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr5_-_137848517_137848590	2.96172	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg19_v1_chr2_+_216986817_216986917	2.95627	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr1_+_67632168_67632168	2.95446	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg19_v1_chr1_-_31538553_31538631	2.93957	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr18_+_55862577_55862884	2.93396	SOX2.p2	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr3_+_179280738_179280744	2.93375	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A
hg19_v1_chr4_-_83350452_83350547	2.92487	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr10_-_91102430_91102481	2.9196	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr5_-_150326105_150326142	2.91669	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg19_v1_chr10_+_70748476_70748594	2.90953	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr3_+_179280746_179280881	2.90202	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg19_v1_chr5_-_140700286_140700333	2.90202	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr10_-_62149487_62149633	2.89779	SOX2.p2	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr1_+_165797060_165797112	2.89529	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg19_v1_chr15_-_70994608_70994646	2.86159	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v1_chr2_-_20512016_20512083	2.86107	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr11_-_61584228_61584375	2.85924	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr11_-_10879365_10879672	2.85724	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg19_v1_chr20_-_5100443_5100668	2.85449	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr4_+_144434555_144434902	2.84597	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v1_chr3_-_69129502_69129544	2.84275	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr8_+_11660207_11660269	2.84109	SOX2.p2	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr5_+_140810181_140810205	2.83825	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chrX_-_33229428_33229672	2.8325	SOX2.p2	S60972|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg19_v1_chr3_+_111717585_111717829	2.83151	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chr15_+_51973549_51973713	2.83037	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr20_-_36152952_36152952	2.8293	SOX2.p2	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg19_v1_chr20_+_2944918_2944935	2.82928	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr1_+_100315806_100316044	2.82053	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr15_+_57511616_57511718	2.82	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg19_v1_chr4_+_26322627_26322646	2.81904	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr7_+_55433396_55433748	2.80792	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr16_-_19533285_19533468	2.8055	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg19_v1_chr18_+_657674_657748	2.79983	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr6_+_56954801_56954828	2.79625	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg19_v1_chr8_-_27115897_27115927	2.79429	SOX2.p2	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg19_v1_chr8_+_98656329_98656426	2.79012	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg19_v1_chr2_+_231921562_231921592	2.78134	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr1_+_200993041_200993134	2.75699	SOX2.p2	
hg19_v1_chrX_+_100805415_100805588	2.7568	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr5_-_138211054_138211064	2.74758	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr7_+_94292816_94292946	2.74634	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr9_-_136933091_136933296	2.73636	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg19_v1_chr20_-_43150673_43150683	2.72851	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg19_v1_chr2_+_36583369_36583435	2.72675	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v1_chr17_+_3572089_3572115	2.71822	SOX2.p2	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg19_v1_chr11_+_129940462_129940462	2.69925	SOX2.p2	AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr1_+_100316530_100316598	2.69839	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr14_+_75229995_75230069	2.69642	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg19_v1_chr4_+_154125589_154125621	2.69273	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr20_+_9198036_9198081	2.68833	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr11_-_78052925_78052925	2.68328	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chr4_-_24586178_24586200	2.67647	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr14_+_39649711_39649842	2.65498	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg19_v1_chr7_-_44887663_44887675	2.65304	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg19_v1_chrX_+_47092362_47092568	2.64591	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr3_-_196911001_196911001	2.6403	SOX2.p2	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)
hg19_v1_chr2_+_231921608_231921624	2.62846	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr6_+_17600504_17600695	2.622	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg19_v1_chr13_-_50367027_50367220	2.62054	SOX2.p2	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)
hg19_v1_chr1_+_955468_955525	2.62046	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg19_v1_chr1_-_41625539_41625604	2.61588	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg19_v1_chr11_+_69455837_69455875	2.61532	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg19_v1_chr1_+_156589085_156589288	2.61482	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg19_v1_chr8_+_86376130_86376310	2.60707	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	AF015039|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg19_v1_chr4_-_83351294_83351413	2.60286	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_001207000|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr3_-_52001388_52001481	2.60249	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg19_v1_chr13_-_45150601_45150700	2.59639	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr15_-_49338496_49338777	2.59359	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg19_v1_chr1_-_246580710_246580713	2.59328	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg19_v1_chr9_+_110047049_110047134	2.5916	SOX2.p2	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg19_v1_chr17_+_80416606_80416679	2.5915	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr1_+_109419748_109419826	2.58945	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr17_-_62658175_62658190	2.57864	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr15_+_84116172_84116285	2.56784	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr18_+_657633_657663	2.56646	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chr5_-_176900653_176900693	2.56634	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg19_v1_chr19_-_1567875_1568056	2.55777	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr8_-_110620220_110620232	2.5574	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr1_+_15272414_15272414	2.53919	SOX2.p2	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg19_v1_chr6_+_134274247_134274443	2.53806	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chrX_+_12994286_12994400	2.53511	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr14_+_90863365_90863489	2.53344	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr22_+_19419341_19419424	2.53003	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg19_v1_chr9_-_91793375_91793554	2.52302	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr5_-_134734886_134734891	2.51105	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr10_+_121578768_121578785	2.51018	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr1_-_53793743_53793820	2.50797	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr10_+_180404_180423	2.50323	SOX2.p2	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr10_+_111967302_111967416	2.49998	SOX2.p2	BC035128|MXI1|4601|MAX interactor 1	NM_130439|MXI1|4601|MAX interactor 1
hg19_v1_chr8_+_17822093_17822128	2.49717	SOX2.p2	AF068293|PCM1|5108|pericentriolar material 1
hg19_v1_chr17_-_4269814_4270002	2.49491	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chrX_+_153030956_153030966	2.48802	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg19_v1_chr8_+_32504250_32504250	2.48411	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg19_v1_chr17_-_47755340_47755524	2.48127	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chr1_+_203096835_203096860	2.47467	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg19_v1_chr2_+_210444154_210444187	2.47395	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr2_-_232326394_232326465	2.47335	SOX2.p2	AK001314|NCL|4691|nucleolin
hg19_v1_chr18_+_32556891_32557027	2.47131	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chr3_+_179280686_179280733	2.46946	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg19_v1_chr8_+_104831415_104831735	2.46741	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chr7_+_29519485_29519485	2.4631	SOX2.p2	NM_001039936|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr4_-_106629803_106629880	2.453	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg19_v1_chr1_-_201476218_201476240	2.44263	SOX2.p2	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr8_+_21777216_21777281	2.43493	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr8_+_110346549_110346637	2.4334	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg19_v1_chr14_+_85996454_85996493	2.43151	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr20_+_31367637_31367657	2.41818	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr8_+_145064167_145064229	2.41486	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr1_+_109419601_109419621	2.40576	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr5_+_156696351_156696361	2.40545	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr12_+_15475445_15475658	2.39859	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg19_v1_chr7_+_105603656_105603741	2.39815	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg19_v1_chr1_+_229440128_229440128	2.38463	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg19_v1_chr3_-_185641596_185641735	2.38445	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr1_-_75199091_75199091	2.3717	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg19_v1_chr5_+_161275897_161275897	2.36203	SOX2.p2	NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr1_+_161169104_161169104	2.35831	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg19_v1_chr2_+_231921625_231921736	2.35698	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chrX_+_102611379_102611462	2.35653	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr6_-_150057659_150057707	2.35277	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg19_v1_chr6_-_47254143_47254220	2.35137	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_+_153606457_153606546	2.35077	SOX2.p2	NM_001206612|CHTOP|26097|chromatin target of PRMT1	NM_001244664|CHTOP|26097|chromatin target of PRMT1	NM_015607|CHTOP|26097|chromatin target of PRMT1	AF261137|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr11_-_27681195_27681195	2.34882	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr8_-_110661007_110661131	2.34494	SOX2.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr1_+_16085245_16085309	2.3327	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr1_+_27023932_27024006	2.32434	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr1_-_235490801_235490801	2.30607	SOX2.p2	AB210032|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_001206794|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr17_-_27402626_27402626	2.30565	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg19_v1_chr5_-_111093792_111093914	2.30402	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr4_+_144435076_144435153	2.29585	SOX2.p2	
hg19_v1_chr2_+_219082119_219082193	2.29577	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr2_+_106432922_106433029	2.29424	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg19_v1_chr1_+_159141376_159141555	2.27865	SOX2.p2	AK289541|CADM3|57863|cell adhesion molecule 3	NM_021189|CADM3|57863|cell adhesion molecule 3	AK308915|CADM3|57863|cell adhesion molecule 3	NM_001127173|CADM3|57863|cell adhesion molecule 3	AF363367|CADM3|57863|cell adhesion molecule 3	AY358332|CADM3|57863|cell adhesion molecule 3	AF062733|CADM3|57863|cell adhesion molecule 3	BC033819|CADM3|57863|cell adhesion molecule 3	AY046418|CADM3|57863|cell adhesion molecule 3	AF529206|CADM3|57863|cell adhesion molecule 3	DQ890848|CADM3|57863|cell adhesion molecule 3	DQ894002|CADM3|57863|cell adhesion molecule 3
hg19_v1_chr8_+_145064238_145064316	2.275	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr9_-_14398981_14398981	2.27105	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chr14_+_20923341_20923355	2.2638	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr3_+_35721115_35721278	2.25973	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr19_+_41257086_41257312	2.23577	SOX2.p2	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr2_+_208394615_208394671	2.22635	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr4_-_57547845_57547871	2.21827	SOX2.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chr19_+_40872709_40872857	2.20763	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr13_+_36050885_36050965	2.18459	SOX2.p2	AK294737|NBEA|26960|neurobeachin	NM_001204197|NBEA|26960|neurobeachin	AK315939|NBEA|26960|neurobeachin
hg19_v1_chr9_+_4490193_4490681	2.18037	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr20_+_17207596_17207625	2.17308	SOX2.p2	NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chrX_+_100878101_100878182	2.16937	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg19_v1_chr2_-_171923482_171923482	2.16843	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg19_v1_chr4_+_77953942_77954068	2.16529	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg19_v1_chr5_-_179051586_179051669	2.16372	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chrX_-_118726852_118727112	2.16082	SOX2.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr20_+_60878048_60878073	2.1563	SOX2.p2	BC017245|ADRM1|11047|adhesion regulating molecule 1	BC093021|ADRM1|11047|adhesion regulating molecule 1	BC003059|ADRM1|11047|adhesion regulating molecule 1	AK297567|ADRM1|11047|adhesion regulating molecule 1	D64154|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr20_+_60877939_60878022	2.15511	SOX2.p2	AK307459|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr1_-_108786663_108786702	2.13965	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg19_v1_chr11_+_118478305_118478450	2.13431	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg19_v1_chr11_-_85780899_85780922	2.13388	SOX2.p2	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg19_v1_chr6_+_56954985_56955008	2.13238	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg19_v1_chr10_+_102732285_102732285	2.13217	SOX2.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr11_-_63536112_63536281	2.1311	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg19_v1_chr1_+_177140530_177140632	2.12687	SOX2.p2	AB051534|FAM5B|57795|family with sequence similarity 5, member B	AB161694|FAM5B|57795|family with sequence similarity 5, member B	BC028036|FAM5B|57795|family with sequence similarity 5, member B	NM_021165|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr5_-_111093251_111093465	2.12651	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr5_+_161275185_161275229	2.12104	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr21_-_27423423_27423464	2.11959	SOX2.p2	
hg19_v1_chr17_+_61851557_61851584	2.11396	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg19_v1_chrX_+_12993224_12993256	2.11276	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr11_-_65625737_65625803	2.10862	SOX2.p2	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg19_v1_chr6_-_112080284_112080333	2.09575	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chrX_+_119738542_119738583	2.08315	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr11_+_46402333_46402617	2.06649	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr5_+_138089118_138089145	2.06302	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr15_+_25200069_25200191	2.05173	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg19_v1_chr11_+_747424_747427	2.03586	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg19_v1_chr17_-_4269610_4269812	2.03549	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr4_-_76598563_76598596	2.03072	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr1_-_155649597_155649619	2.0269	SOX2.p2	AK303386|YY1AP1|55249|YY1 associated protein 1	NM_001198899|YY1AP1|55249|YY1 associated protein 1
hg19_v1_chr5_-_168271852_168271866	2.02107	SOX2.p2	
hg19_v1_chr5_+_161274939_161274939	2.0153	SOX2.p2	NM_001127644|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr15_+_96869156_96869166	2.01096	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr8_-_80679897_80680097	2.00461	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg19_v1_chr5_+_140810126_140810168	2.00236	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr5_-_147162264_147162347	1.99689	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr12_+_20848288_20848702	1.99578	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr20_+_60878024_60878046	1.99325	SOX2.p2	NM_007002|ADRM1|11047|adhesion regulating molecule 1	NM_175573|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chrX_-_137821514_137821514	1.98402	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr10_-_91011586_91011659	1.97758	SOX2.p2	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr1_-_31538486_31538549	1.974	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr14_+_75283664_75283737	1.97092	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg19_v1_chr10_+_22605300_22605351	1.97071	SOX2.p2	NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	AY542159|COMMD3|23412|COMM domain containing 3
hg19_v1_chr14_+_32798478_32798595	1.96891	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg19_v1_chr12_+_50156977_50157080	1.95955	SOX2.p2	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg19_v1_chr8_+_59323822_59323948	1.9576	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	HQ258392|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg19_v1_chr16_+_8814567_8814593	1.9416	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr10_+_54074037_54074194	1.93988	SOX2.p2	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)
hg19_v1_chr10_+_18549583_18549697	1.93788	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr1_+_39547088_39547088	1.92856	SOX2.p2	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1	NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1
hg19_v1_chr1_+_151227209_151227234	1.92771	SOX2.p2	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr21_-_35014013_35014159	1.92094	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chrX_-_110654373_110654373	1.91934	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg19_v1_chr2_+_166326156_166326212	1.91855	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr4_+_17616246_17616286	1.91639	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg19_v1_chr8_-_29940487_29940658	1.91401	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg19_v1_chr5_-_142077508_142077634	1.914	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr5_+_86564146_86564164	1.91103	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr11_+_747428_747440	1.91097	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg19_v1_chr11_+_63753827_63753896	1.9087	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr7_-_55930444_55930481	1.90786	SOX2.p2	AK301928|SEPT14|346288|septin 14	NM_207366|SEPT14|346288|septin 14
hg19_v1_chr6_+_126240369_126240477	1.90647	SOX2.p2	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg19_v1_chr18_-_25756946_25757128	1.90639	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr15_-_42749710_42749764	1.90297	SOX2.p2	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)	NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg19_v1_chr15_-_50411405_50411527	1.9015	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg19_v1_chr18_+_7946885_7946928	1.8994	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg19_v1_chr2_-_72374919_72374965	1.89692	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v1_chr1_-_26232890_26232992	1.88285	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr6_-_136847743_136847851	1.8814	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr6_+_80714389_80714409	1.87583	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg19_v1_chr1_-_182357757_182357770	1.87235	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chrX_+_119737743_119737834	1.87064	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr2_-_39664129_39664290	1.87028	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr8_-_24814028_24814132	1.87015	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg19_v1_chr1_-_115300615_115300670	1.86873	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr7_-_148581297_148581358	1.86605	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr6_-_108279307_108279318	1.86221	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr1_+_66798095_66798096	1.85969	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr6_-_31510251_31510251	1.85365	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr19_+_41771013_41771069	1.85338	SOX2.p2	AK297127|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr18_-_52969714_52969851	1.85084	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr18_-_31802433_31802433	1.84301	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg19_v1_chrX_+_70503512_70503532	1.83908	SOX2.p2	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr18_-_54305839_54305990	1.83908	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr18_+_55888799_55888808	1.83609	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr15_-_59225800_59225863	1.83508	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr15_-_83240499_83240572	1.83118	SOX2.p2	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg19_v1_chr11_+_129979330_129979349	1.82845	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr4_-_153456152_153456436	1.82762	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr6_-_108279320_108279347	1.82761	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr14_-_21493122_21493271	1.80936	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg19_v1_chr4_+_41614725_41614803	1.80518	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr2_-_241759627_241759724	1.80441	SOX2.p2	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A	NM_001244008|KIF1A|547|kinesin family member 1A	NM_004321|KIF1A|547|kinesin family member 1A
hg19_v1_chr3_+_128532267_128532404	1.80414	SOX2.p2	
hg19_v1_chr17_+_75283972_75283986	1.80408	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg19_v1_chr2_+_198380294_198380319	1.79857	SOX2.p2	NM_199482|MOB4|25843|MOB family member 4, phocein	AK289377|MOB4|25843|MOB family member 4, phocein	AF250319|MOB4|25843|MOB family member 4, phocein
hg19_v1_chr1_-_154840460_154840542	1.79484	SOX2.p2	
hg19_v1_chr2_-_130929945_130930057	1.79398	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg19_v1_chr5_-_137514299_137514368	1.78776	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg19_v1_chr4_-_157892054_157892380	1.78529	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg19_v1_chr6_-_131321868_131321906	1.78501	SOX2.p2	CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr7_-_99698993_99699029	1.78296	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr13_+_98086681_98086724	1.77403	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg19_v1_chrX_-_31526414_31526414	1.77192	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg19_v1_chr20_-_48530275_48530275	1.77118	SOX2.p2	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg19_v1_chr22_-_41682169_41682183	1.77109	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr5_+_137673956_137674010	1.76903	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr11_+_89392464_89392464	1.76505	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg19_v1_chr7_-_148581403_148581449	1.76414	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr18_+_13611664_13611664	1.76147	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg19_v1_chr8_+_124194751_124194829	1.75899	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr12_-_45270632_45270632	1.75757	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr10_-_101190201_101190531	1.75661	SOX2.p2	AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)
hg19_v1_chr5_+_137673953_137673955	1.7558	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr15_-_33360084_33360387	1.75284	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr7_-_99699030_99699045	1.73993	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr4_-_24586176_24586177	1.73939	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr21_-_47705235_47705275	1.7372	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg19_v1_chr12_-_102455739_102455761	1.7343	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr6_-_132834165_132834336	1.73343	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr3_-_15839674_15839690	1.72994	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chr14_-_69354900_69354979	1.72758	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg19_v1_chr6_-_31509725_31509767	1.72692	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr2_+_231921595_231921607	1.72466	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr10_-_75193297_75193369	1.72143	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg19_v1_chr5_+_43602738_43602941	1.721	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg19_v1_chr20_+_34995443_34995443	1.71992	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg19_v1_chr4_-_153303663_153303666	1.71254	SOX2.p2	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7	AY008274|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr5_+_140767402_140767451	1.70494	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg19_v1_chr9_-_14313899_14313907	1.70161	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg19_v1_chr19_+_36139221_36139228	1.70038	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chrX_+_107683015_107683153	1.70019	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr8_-_18871163_18871410	1.69956	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr8_+_21777165_21777214	1.69939	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr11_+_22359666_22359666	1.69256	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg19_v1_chrX_+_135579670_135579843	1.69251	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr6_-_108582307_108582463	1.69229	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chr1_+_151227188_151227206	1.69146	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr11_+_112832201_112832212	1.68903	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr14_+_74035762_74035788	1.6807	SOX2.p2	AK001939|ACOT2|10965|acyl-CoA thioesterase 2	DQ082755|ACOT2|10965|acyl-CoA thioesterase 2	AK223635|ACOT2|10965|acyl-CoA thioesterase 2	NM_006821|ACOT2|10965|acyl-CoA thioesterase 2	BC006335|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr9_+_90112754_90112983	1.68005	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr5_+_95066628_95067109	1.67943	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr1_+_10490158_10490158	1.67657	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr4_+_170581212_170581298	1.67593	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3	NM_001243374|CLCN3|1182|chloride channel 3
hg19_v1_chr17_-_62658311_62658419	1.6719	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr2_+_109204904_109205034	1.67159	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr18_+_56530060_56530179	1.67079	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chrX_-_134185978_134186280	1.66394	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg19_v1_chr5_+_137673702_137673814	1.65995	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr17_+_80416530_80416597	1.65074	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr6_-_152958533_152958533	1.64349	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chr15_-_73925555_73925617	1.63938	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr4_+_26322647_26322717	1.63888	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr20_-_1448336_1448336	1.63741	SOX2.p2	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg19_v1_chr2_-_3605918_3605924	1.63379	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg19_v1_chr17_+_66031885_66031892	1.62608	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr4_-_99851785_99851787	1.62369	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr3_-_57583080_57583087	1.62341	SOX2.p2	BC008753|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr5_+_140566655_140566893	1.61956	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg19_v1_chr13_+_24844846_24844950	1.61411	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr1_-_115259433_115259514	1.60724	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr10_-_118765087_118765138	1.60334	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chr1_+_154947116_154947142	1.60321	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg19_v1_chr5_+_161275541_161275568	1.60197	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr11_+_63753902_63753938	1.59951	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr8_-_18541441_18541624	1.59577	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr7_-_143599163_143599367	1.59552	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A	NM_001206938|FAM115A|9747|family with sequence similarity 115, member A
hg19_v1_chr5_-_179044835_179044916	1.58888	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr11_+_131780537_131780711	1.58545	SOX2.p2	NM_001144058|NTM|50863|neurotrimin	NM_001144059|NTM|50863|neurotrimin	NM_016522|NTM|50863|neurotrimin
hg19_v1_chr3_+_184033936_184033978	1.58204	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr1_+_97187174_97187394	1.58118	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg19_v1_chr8_-_103137134_103137134	1.58113	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg19_v1_chr1_+_19972259_19972259	1.58009	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr4_-_57522469_57522687	1.57981	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg19_v1_chr3_-_57582866_57583075	1.57513	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr8_+_98656428_98656491	1.57041	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg19_v1_chr5_+_138089073_138089116	1.56892	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr12_-_56679729_56679874	1.56478	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr17_-_7145742_7145784	1.5642	SOX2.p2	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr3_+_142342265_142342343	1.5628	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr10_-_116444374_116444413	1.56179	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg19_v1_chr12_-_56615679_56615772	1.56108	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr2_+_172821874_172822000	1.56044	SOX2.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr1_+_27101217_27101360	1.55767	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr16_+_24266873_24266875	1.55668	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg19_v1_chr6_+_139094656_139094925	1.55575	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr18_+_55888838_55888862	1.55426	SOX2.p2	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr11_-_102323353_102323874	1.55294	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg19_v1_chr17_-_38978824_38978870	1.54738	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg19_v1_chr5_+_61602065_61602100	1.54614	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr19_+_41256758_41256795	1.54379	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr1_+_155293727_155293727	1.54349	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr12_-_54582588_54582785	1.53199	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v1_chr12_-_102455763_102455791	1.53119	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr1_+_171810611_171810796	1.52128	SOX2.p2	NM_001136127|DNM3|26052|dynamin 3	NM_015569|DNM3|26052|dynamin 3	AK056279|DNM3|26052|dynamin 3	AL136712|DNM3|26052|dynamin 3	AB020627|DNM3|26052|dynamin 3	AK308992|DNM3|26052|dynamin 3	AK307806|DNM3|26052|dynamin 3	BC064546|DNM3|26052|dynamin 3	AM393667|DNM3|26052|dynamin 3	AM393846|DNM3|26052|dynamin 3
hg19_v1_chr13_+_34392254_34392315	1.52089	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr14_+_20923289_20923325	1.51461	SOX2.p2	NM_001244249|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr11_-_66115016_66115166	1.5136	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v1_chr17_-_38210888_38210888	1.50827	SOX2.p2	NM_001079518|MED24|9862|mediator complex subunit 24	NM_014815|MED24|9862|mediator complex subunit 24
hg19_v1_chr8_-_29940464_29940485	1.50821	SOX2.p2	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg19_v1_chr13_+_58205788_58205788	1.5011	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr8_+_145064583_145064643	1.49342	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr5_-_111093030_111093133	1.48883	SOX2.p2	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr22_-_38840032_38840032	1.48456	SOX2.p2	NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4
hg19_v1_chr6_+_32940860_32940860	1.47864	SOX2.p2	BX647233|BRD2|6046|bromodomain containing 2	NM_001199456|BRD2|6046|bromodomain containing 2
hg19_v1_chr11_-_77348758_77348871	1.47652	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg19_v1_chr2_-_203776200_203776429	1.47211	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg19_v1_chr19_+_36139124_36139210	1.46852	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr10_+_63661012_63661012	1.46503	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg19_v1_chr5_+_125759076_125759298	1.46099	SOX2.p2	AK024966|GRAMD3|65983|GRAM domain containing 3	AK225829|GRAMD3|65983|GRAM domain containing 3	BC008590|GRAMD3|65983|GRAM domain containing 3	AK294656|GRAMD3|65983|GRAM domain containing 3	AK293307|GRAMD3|65983|GRAM domain containing 3	AK296267|GRAMD3|65983|GRAM domain containing 3	AY116970|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr6_+_34204928_34204935	1.45529	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr3_-_48754589_48754710	1.45339	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg19_v1_chr18_+_11751470_11751561	1.44433	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chr19_+_1269244_1269366	1.44326	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein
hg19_v1_chr14_+_50234783_50234891	1.44191	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr1_+_68150858_68150962	1.44165	SOX2.p2	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg19_v1_chr7_-_107880492_107880613	1.43956	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr3_-_141747434_141747506	1.43742	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v1_chr14_-_22005035_22005336	1.43534	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr2_-_47403613_47403639	1.43173	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr12_-_51477299_51477453	1.43121	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr2_-_18770776_18770845	1.41522	SOX2.p2	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB
hg19_v1_chr8_+_64081187_64081213	1.41109	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr15_+_66585822_66585977	1.40963	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr16_+_67063035_67063059	1.4093	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr16_+_524843_524856	1.40849	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg19_v1_chr20_+_2903852_2903911	1.40656	SOX2.p2	NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr7_+_29234111_29234135	1.40303	SOX2.p2	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr1_+_35851101_35851133	1.39882	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg19_v1_chr1_-_201476241_201476245	1.39815	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr4_+_55523906_55524362	1.39737	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v1_chrX_+_110339374_110339428	1.39453	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr17_-_56065474_56065594	1.39411	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr8_-_17580024_17580083	1.39368	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr12_-_80307690_80307690	1.39206	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chr1_+_33116748_33116958	1.39002	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg19_v1_chr8_+_61429390_61429491	1.38829	SOX2.p2	NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr14_+_73603168_73603193	1.38686	SOX2.p2	L42110|PSEN1|5663|presenilin 1
hg19_v1_chr21_-_27543445_27543445	1.3865	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr11_-_47510518_47510576	1.38637	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg19_v1_chr7_-_140179133_140179191	1.38362	SOX2.p2	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr8_+_82192717_82192830	1.38267	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chr17_-_7145645_7145740	1.37717	SOX2.p2	CR457043|GABARAP|11337|GABA(A) receptor-associated protein	CR542235|GABARAP|11337|GABA(A) receptor-associated protein	BC106748|GABARAP|11337|GABA(A) receptor-associated protein	BC106749|GABARAP|11337|GABA(A) receptor-associated protein	AF161586|GABARAP|11337|GABA(A) receptor-associated protein	AF044671|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr3_-_185655833_185655923	1.36575	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr6_-_79675672_79675833	1.36193	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr22_-_44708730_44708730	1.35972	SOX2.p2	NM_001099294|KIAA1644|85352|KIAA1644
hg19_v1_chr10_-_104179468_104179474	1.35877	SOX2.p2	BC039259|PSD|5662|pleckstrin and Sec7 domain containing	AF452641|PSD|5662|pleckstrin and Sec7 domain containing
hg19_v1_chr2_-_39664291_39664311	1.358	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr13_+_22245083_22245214	1.35746	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg19_v1_chr6_+_30297087_30297094	1.35676	SOX2.p2	NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough	BT007370|TRIM39|56658|tripartite motif containing 39
hg19_v1_chrX_+_47077426_47077793	1.35057	SOX2.p2	NM_033018|CDK16|5127|cyclin-dependent kinase 16	BC001048|CDK16|5127|cyclin-dependent kinase 16	BC015607|CDK16|5127|cyclin-dependent kinase 16
hg19_v1_chr7_-_105162551_105162772	1.34332	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg19_v1_chr3_-_57583090_57583148	1.34097	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr13_+_98605928_98605947	1.3403	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg19_v1_chr2_-_160472960_160473079	1.3383	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg19_v1_chr21_-_16437125_16437309	1.33612	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg19_v1_chr12_-_102455793_102455930	1.32495	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr1_-_205719157_205719227	1.32311	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chrX_+_10124984_10125125	1.31966	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg19_v1_chr5_+_112073555_112073591	1.31962	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg19_v1_chr11_-_47664014_47664212	1.3183	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier 2	DQ894993|MTCH2|23788|mitochondrial carrier 2	AK223097|MTCH2|23788|mitochondrial carrier 2	BC000875|MTCH2|23788|mitochondrial carrier 2	AY380792|MTCH2|23788|mitochondrial carrier 2	AF085361|MTCH2|23788|mitochondrial carrier 2	AF176008|MTCH2|23788|mitochondrial carrier 2	AK295218|MTCH2|23788|mitochondrial carrier 2	AK313032|MTCH2|23788|mitochondrial carrier 2	NM_014342|MTCH2|23788|mitochondrial carrier 2
hg19_v1_chr14_-_21979364_21979506	1.31378	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg19_v1_chr11_+_114271372_114271432	1.3116	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr9_+_133710746_133710830	1.30591	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr17_-_5372235_5372379	1.30018	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_001199699|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr1_+_2036154_2036154	1.29727	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr5_+_92918924_92919042	1.29105	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr5_-_137475076_137475131	1.28811	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr16_-_75529278_75529281	1.28725	SOX2.p2	
hg19_v1_chr1_-_149899623_149899670	1.28615	SOX2.p2	DQ892971|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	DQ896220|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	EU176749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK223322|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC004273|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC013886|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK310495|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr3_+_173116243_173116243	1.28202	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr8_+_136470108_136470294	1.27946	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr6_-_108582225_108582252	1.27744	SOX2.p2	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg19_v1_chr3_+_20081523_20081523	1.27369	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg19_v1_chr5_-_176836535_176836576	1.27214	SOX2.p2	AB095845|F12|2161|coagulation factor XII (Hageman factor)	NM_000505|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chrX_-_77041678_77041774	1.27209	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr6_-_38670915_38670919	1.27175	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg19_v1_chr17_-_38210611_38210678	1.26432	SOX2.p2	EU392536|MED24|9862|mediator complex subunit 24	EU392541|MED24|9862|mediator complex subunit 24	D50920|MED24|9862|mediator complex subunit 24	AK022508|MED24|9862|mediator complex subunit 24	AK303502|MED24|9862|mediator complex subunit 24	AK303745|MED24|9862|mediator complex subunit 24	AK291040|MED24|9862|mediator complex subunit 24	AK293309|MED24|9862|mediator complex subunit 24	AK299864|MED24|9862|mediator complex subunit 24	AK300992|MED24|9862|mediator complex subunit 24
hg19_v1_chr15_+_66585632_66585659	1.26318	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr9_-_74979625_74979825	1.26034	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr1_-_205719340_205719371	1.25612	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr20_+_17207680_17207950	1.25556	SOX2.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr17_-_4458618_4458730	1.25186	SOX2.p2	EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a	BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a	AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a	AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a	AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a	AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a
hg19_v1_chr7_+_77167351_77167385	1.2509	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr13_-_33760215_33760215	1.24928	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr20_+_61448391_61448416	1.24867	SOX2.p2	BC011705|COL9A3|1299|collagen, type IX, alpha 3	NM_001853|COL9A3|1299|collagen, type IX, alpha 3	DQ892946|COL9A3|1299|collagen, type IX, alpha 3	DQ896194|COL9A3|1299|collagen, type IX, alpha 3	L41162|COL9A3|1299|collagen, type IX, alpha 3
hg19_v1_chr6_+_34857021_34857179	1.24822	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr11_-_111750144_111750180	1.24781	SOX2.p2	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg19_v1_chr10_+_122610853_122610937	1.24689	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg19_v1_chr7_-_148581359_148581376	1.24658	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr1_-_47695442_47695442	1.23642	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chr18_-_53257033_53257044	1.23137	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_34656482_34656543	1.23123	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_-_201476248_201476386	1.23072	SOX2.p2	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr20_+_9458460_9458567	1.22968	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr12_-_120907535_120907613	1.22932	SOX2.p2	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr10_-_104953010_104953084	1.22783	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg19_v1_chr15_+_57210889_57210915	1.22699	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg19_v1_chr12_-_111893857_111893989	1.22174	SOX2.p2	
hg19_v1_chr2_-_242556883_242556915	1.22046	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg19_v1_chr18_-_53177999_53177999	1.22024	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr17_+_65821625_65821780	1.2199	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chrX_-_15872921_15872937	1.21785	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr14_+_91580467_91580558	1.21696	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr22_+_20909221_20909393	1.21693	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg19_v1_chr5_-_142000899_142000906	1.21679	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr15_+_80390757_80390757	1.21577	SOX2.p2	NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr4_+_88343702_88344056	1.20826	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr2_+_54683276_54683948	1.20749	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg19_v1_chr13_+_53216564_53216567	1.20575	SOX2.p2	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2
hg19_v1_chr1_-_225616556_225616556	1.20415	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr7_+_73868397_73868474	1.20354	SOX2.p2	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr10_+_111765725_111765838	1.2032	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg19_v1_chr1_-_53793583_53793742	1.20219	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr4_-_104020964_104021036	1.20047	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg19_v1_chr7_-_148580600_148580626	1.19827	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr1_-_43424536_43424608	1.19721	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chrX_-_100872926_100872990	1.18855	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr9_+_91003238_91003428	1.18853	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg19_v1_chr1_+_155294217_155294367	1.18686	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr15_-_37390372_37390561	1.18572	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg19_v1_chr21_+_37507209_37507490	1.18295	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg19_v1_chr6_-_108582167_108582221	1.18184	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr11_+_125496123_125496336	1.18118	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chrX_+_70503496_70503508	1.17769	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr1_-_201475966_201475966	1.17679	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr12_-_49582296_49582473	1.17461	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr2_-_170430312_170430423	1.17303	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg19_v1_chr20_-_34241830_34241830	1.1659	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg19_v1_chr1_+_205236591_205236677	1.16469	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr14_+_62164339_62164339	1.16455	SOX2.p2	FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chrX_+_119737984_119738091	1.16439	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr1_-_212004113_212004148	1.16401	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg19_v1_chr6_-_11779279_11779279	1.1568	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg19_v1_chr12_-_120907411_120907497	1.15499	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr6_-_24719286_24719402	1.15022	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg19_v1_chr2_+_109204745_109204767	1.14964	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr14_+_73603160_73603161	1.14911	SOX2.p2	BC011729|PSEN1|5663|presenilin 1
hg19_v1_chr1_+_19971865_19971865	1.14072	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr14_+_103800534_103800546	1.13972	SOX2.p2	AL080102|EIF5|1983|eukaryotic translation initiation factor 5	AK026933|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr1_-_101360405_101360417	1.13929	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr17_+_72581056_72581056	1.13894	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg19_v1_chr17_-_47492215_47492215	1.13758	SOX2.p2	BC095460|PHB|5245|prohibitin
hg19_v1_chr5_+_125758818_125758868	1.13425	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr5_-_11904127_11904242	1.13286	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr17_+_56769953_56770049	1.12942	SOX2.p2	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chrX_-_112066353_112066353	1.12869	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr2_-_192711651_192711826	1.12797	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chr5_+_169010637_169010806	1.12623	SOX2.p2	NM_017785|CCDC99|54908|coiled-coil domain containing 99	AK304623|CCDC99|54908|coiled-coil domain containing 99	AF269167|CCDC99|54908|coiled-coil domain containing 99	AK310442|CCDC99|54908|coiled-coil domain containing 99	AK308835|CCDC99|54908|coiled-coil domain containing 99	BC012568|CCDC99|54908|coiled-coil domain containing 99	AY517557|CCDC99|54908|coiled-coil domain containing 99
hg19_v1_chr17_-_39197663_39197712	1.12233	SOX2.p2	AB055057|KRTAP1-1|81851|keratin associated protein 1-1	BC101152|KRTAP1-3|81850|keratin associated protein 1-3	AJ406926|KRTAP1-1|81851|keratin associated protein 1-1	BC105069|KRTAP1-1|81851|keratin associated protein 1-1	BC105071|KRTAP1-1|81851|keratin associated protein 1-1	BC069321|KRTAP1-1|81851|keratin associated protein 1-1	BC069450|KRTAP1-1|81851|keratin associated protein 1-1	AB052868|KRTAP1-1|81851|keratin associated protein 1-1	AB052934|KRTAP1-1|81851|keratin associated protein 1-1	NM_030967|KRTAP1-1|81851|keratin associated protein 1-1
hg19_v1_chr12_+_111471827_111471917	1.12228	SOX2.p2	BC151245|CUX2|23316|cut-like homeobox 2	NM_015267|CUX2|23316|cut-like homeobox 2	AB006631|CUX2|23316|cut-like homeobox 2	AF271236|CUX2|23316|cut-like homeobox 2
hg19_v1_chr10_+_134000335_134000544	1.1219	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg19_v1_chr20_+_36149606_36149733	1.1214	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr15_-_40331316_40331388	1.12119	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg19_v1_chr6_-_33385662_33385709	1.11744	SOX2.p2	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg19_v1_chrX_+_54947228_54947287	1.1162	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chr3_-_111314181_111314181	1.11473	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr17_+_48821106_48821114	1.11201	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg19_v1_chr5_+_176875325_176875334	1.11168	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg19_v1_chr19_+_21324826_21324887	1.10566	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr6_-_167040700_167040736	1.10495	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr17_-_9940004_9940063	1.1048	SOX2.p2	AK057761|GAS7|8522|growth arrest-specific 7	BC006454|GAS7|8522|growth arrest-specific 7	NM_201432|GAS7|8522|growth arrest-specific 7
hg19_v1_chr1_+_236558715_236558929	1.10465	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg19_v1_chr17_+_43971655_43971747	1.1037	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr19_-_20748540_20748630	1.10289	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg19_v1_chr5_+_179921371_179921416	1.09503	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr3_-_125820390_125820399	1.08915	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr3_+_183415540_183415704	1.08872	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg19_v1_chr6_-_31774725_31774765	1.08732	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr3_+_148583042_148583094	1.08454	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg19_v1_chr17_-_56609361_56609363	1.08396	SOX2.p2	BC018055|SEPT4|5414|septin 4
hg19_v1_chr1_+_65730423_65730436	1.08354	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chr12_-_121734543_121734708	1.08089	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr13_+_111855406_111855439	1.07897	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr12_-_22089627_22089627	1.07856	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v1_chr2_-_192711923_192712020	1.07444	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr2_+_201170795_201171404	1.07415	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr14_+_60712469_60712474	1.07105	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v1_chr20_-_43977023_43977087	1.07011	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg19_v1_chr5_-_147162056_147162132	1.07004	SOX2.p2	BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr15_-_77154284_77154284	1.06995	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg19_v1_chr1_-_31538762_31538804	1.06912	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr2_+_228356287_228356295	1.06849	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chrX_+_152954965_152954965	1.06712	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg19_v1_chr17_+_61678218_61678247	1.06548	SOX2.p2	AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr14_-_58894217_58894231	1.06304	SOX2.p2	BC054875|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC020213|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_012460|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr1_+_172502291_172502471	1.06123	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr19_+_41770349_41770527	1.06092	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr1_-_205719273_205719308	1.05923	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr9_-_132597561_132597598	1.05516	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr12_+_7282963_7283286	1.05392	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr14_+_91580713_91580785	1.04928	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr5_+_85913762_85913872	1.04626	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr7_-_37488408_37488529	1.04444	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr5_+_102201526_102201535	1.04274	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg19_v1_chr12_-_57472573_57472581	1.03168	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg19_v1_chrX_-_48693934_48694057	1.0314	SOX2.p2	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v1_chr1_-_150947202_150947219	1.0308	SOX2.p2	AF177338|CERS2|29956|ceramide synthase 2
hg19_v1_chr11_-_79151694_79151755	1.02965	SOX2.p2	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)
hg19_v1_chr4_+_39408472_39408496	1.02892	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg19_v1_chr3_-_165555167_165555220	1.02668	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr3_-_185655806_185655824	1.02646	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr4_-_164253946_164253946	1.02214	SOX2.p2	NM_000909|NPY1R|4886|neuropeptide Y receptor Y1
hg19_v1_chr5_+_140625146_140625146	1.01936	SOX2.p2	AF152494|PCDHB15|56121|protocadherin beta 15	AF217742|PCDHB15|56121|protocadherin beta 15	DQ893315|PCDHB15|56121|protocadherin beta 15	DQ896630|PCDHB15|56121|protocadherin beta 15	NM_018935|PCDHB15|56121|protocadherin beta 15
hg19_v1_chr19_+_36139233_36139272	1.01913	SOX2.p2	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr19_+_11466173_11466218	1.01605	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr11_-_35440514_35440909	1.01322	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr2_+_130737234_130737236	1.01091	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg19_v1_chrX_+_119737905_119737982	1.00201	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr5_+_85913755_85913761	1.00045	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr1_-_182360400_182360677	0.997356	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr1_+_110881944_110882045	0.993303	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_001201545|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr10_+_28822387_28822420	0.990854	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr6_-_38670904_38670912	0.989815	SOX2.p2	BC011365|GLO1|2739|glyoxalase I
hg19_v1_chr6_+_160183510_160183544	0.987515	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg19_v1_chr12_+_109535922_109536131	0.987032	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg19_v1_chr1_+_53480573_53480613	0.985862	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg19_v1_chrX_+_128674181_128674416	0.984796	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr17_+_73008744_73008810	0.982821	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg19_v1_chr21_+_34398210_34398292	0.978103	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg19_v1_chr7_+_44836273_44836301	0.976936	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr4_-_5890142_5890237	0.976589	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr3_-_47823386_47823408	0.968495	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr2_+_189157551_189157612	0.965241	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr7_-_148581377_148581378	0.965236	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr5_-_176836488_176836522	0.963006	SOX2.p2	M11723|F12|2161|coagulation factor XII (Hageman factor)	M31315|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chr1_+_66797775_66797932	0.962493	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr12_+_56360547_56360632	0.962123	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr19_+_9938555_9938580	0.957413	SOX2.p2	NM_001048241|UBL5|59286|ubiquitin-like 5	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg19_v1_chr5_+_170846659_170846666	0.951717	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr5_-_134734915_134734927	0.951586	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr11_-_62473502_62473890	0.946286	SOX2.p2	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr1_+_26737232_26737270	0.940765	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg19_v1_chr5_-_136834887_136835074	0.939495	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v1_chrX_-_15872938_15872938	0.937425	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr19_-_53233134_53233134	0.934509	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg19_v1_chr7_+_73868236_73868380	0.933342	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr15_-_99789585_99789827	0.931563	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr20_-_45927496_45927643	0.931275	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr1_+_955609_955681	0.92999	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg19_v1_chr2_+_208394823_208394828	0.927805	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr22_-_41682187_41682228	0.927433	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chrX_-_15872905_15872913	0.927379	SOX2.p2	
hg19_v1_chr14_+_73603140_73603159	0.925089	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg19_v1_chr12_+_121132677_121132759	0.922916	SOX2.p2	
hg19_v1_chr2_-_132121730_132121730	0.922226	SOX2.p2	NM_001077637|WTH3DI|150786|RAB6C-like
hg19_v1_chr1_+_10459084_10459174	0.917432	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr3_+_39449110_39449174	0.91677	SOX2.p2	BC071970|RPSA|3921|ribosomal protein SA	J03799|RPSA|3921|ribosomal protein SA	NM_001012321|RPSA|3921|ribosomal protein SA	BC068062|RPSA|3921|ribosomal protein SA	BC008867|RPSA|3921|ribosomal protein SA	S37431|RPSA|3921|ribosomal protein SA	DQ891146|RPSA|3921|ribosomal protein SA	DQ894326|RPSA|3921|ribosomal protein SA	BT007219|RPSA|3921|ribosomal protein SA	X61156|RPSA|3921|ribosomal protein SA
hg19_v1_chr2_+_231729638_231729653	0.916332	SOX2.p2	AK075361|ITM2C|81618|integral membrane protein 2C	AK090975|ITM2C|81618|integral membrane protein 2C	AK303199|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr19_-_10613266_10613611	0.915626	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg19_v1_chr3_+_184056304_184056421	0.912417	SOX2.p2	BC026221|FAM131A|131408|family with sequence similarity 131, member A
hg19_v1_chr11_+_747449_747483	0.912368	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg19_v1_chr19_-_47164289_47164452	0.911716	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg19_v1_chr1_-_150241210_150241399	0.910928	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr19_-_12834628_12834841	0.905036	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg19_v1_chr11_+_112832089_112832174	0.903132	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr12_+_27863761_27863788	0.902629	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg19_v1_chr6_+_87865261_87865318	0.902234	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg19_v1_chr7_+_44836166_44836268	0.896697	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr3_+_155588423_155588445	0.895071	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr1_+_66458389_66458417	0.893876	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr19_-_44100127_44100298	0.892625	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg19_v1_chr7_-_16505292_16505473	0.892123	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg19_v1_chr4_-_157892545_157892573	0.891243	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg19_v1_chr7_-_99698916_99698992	0.889685	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr19_+_11466061_11466170	0.888977	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr1_-_68697997_68698317	0.887936	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr20_-_34542205_34542266	0.886756	SOX2.p2	AM392883|SCAND1|51282|SCAN domain containing 1	AM393129|SCAND1|51282|SCAN domain containing 1	CR457188|SCAND1|51282|SCAN domain containing 1	EU446495|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr1_-_41627045_41627103	0.88666	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg19_v1_chr1_-_154580677_154580723	0.886583	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg19_v1_chr7_-_140179333_140179368	0.885322	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr6_-_38670922_38670953	0.883878	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg19_v1_chr12_+_121570630_121570773	0.882075	SOX2.p2	NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7
hg19_v1_chr16_+_2563914_2563976	0.879728	SOX2.p2	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr4_-_151770611_151770688	0.879233	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr7_+_95115212_95115374	0.875646	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr19_+_30863318_30863443	0.873458	SOX2.p2	BC150171|ZNF536|9745|zinc finger protein 536	AB002388|ZNF536|9745|zinc finger protein 536	BC146757|ZNF536|9745|zinc finger protein 536	NM_014717|ZNF536|9745|zinc finger protein 536	BC132720|ZNF536|9745|zinc finger protein 536	BC132722|ZNF536|9745|zinc finger protein 536
hg19_v1_chr5_+_92920592_92920744	0.872189	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr12_-_56615484_56615661	0.870496	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr17_-_17485744_17485751	0.870312	SOX2.p2	AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr8_-_8750739_8751137	0.870283	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg19_v1_chr7_-_28998028_28998036	0.86893	SOX2.p2	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr7_-_99699426_99699566	0.867084	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr4_-_83295037_83295123	0.866908	SOX2.p2	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr14_-_54955664_54955707	0.866802	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chr22_-_18923654_18923809	0.862139	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg19_v1_chr4_+_1902352_1902381	0.858135	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr3_-_10547340_10547352	0.854137	SOX2.p2	AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr8_-_22550708_22550861	0.850812	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg19_v1_chr1_-_203155827_203155835	0.850178	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr12_-_21810754_21810766	0.849277	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr9_+_2622134_2622188	0.848082	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr15_+_49715374_49715458	0.847469	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7
hg19_v1_chr1_+_110882063_110882099	0.846106	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr12_+_50869531_50869643	0.844883	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr21_+_38791206_38791206	0.842497	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chr1_-_1623942_1623988	0.842488	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg19_v1_chrX_+_123095555_123095591	0.841595	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg19_v1_chr8_+_98656494_98656732	0.836836	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg19_v1_chr18_+_29078026_29078260	0.832058	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg19_v1_chr3_-_12586962_12586962	0.831954	SOX2.p2	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480
hg19_v1_chr7_+_44788175_44788190	0.831401	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr3_-_160283166_160283219	0.827527	SOX2.p2	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr13_-_107220444_107220527	0.826966	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg19_v1_chr1_-_115259381_115259388	0.824615	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr3_-_165555252_165555283	0.824547	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr20_-_34330179_34330261	0.824091	SOX2.p2	NM_001242599|RBM39|9584|RNA binding motif protein 39	NM_001242600|RBM39|9584|RNA binding motif protein 39	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr8_+_64081108_64081181	0.82408	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr2_-_158731622_158731622	0.821403	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg19_v1_chr7_-_28997907_28997952	0.820399	SOX2.p2	AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats	BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr8_-_33457491_33457500	0.817856	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr1_-_169336999_169337185	0.815604	SOX2.p2	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr14_+_91580356_91580455	0.813808	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr14_+_20923364_20923443	0.810321	SOX2.p2	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr12_-_21810720_21810732	0.802697	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr2_+_31456879_31456964	0.800828	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr2_-_172750724_172750843	0.800725	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr19_-_17414083_17414281	0.800563	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg19_v1_chr7_-_37393271_37393271	0.798173	SOX2.p2	AK291784|ELMO1|9844|engulfment and cell motility 1	NM_001206482|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chrX_-_100914816_100914862	0.796674	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr1_+_151129104_151129157	0.796054	SOX2.p2	NM_001204848|TNFAIP8L2-SCNM1|100534012|TNFAIP8L2-SCNM1 readthrough	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg19_v1_chr16_-_57481270_57481439	0.79579	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr7_+_27779743_27779807	0.795525	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr18_-_53089722_53089722	0.795043	SOX2.p2	AK300612|TCF4|6925|transcription factor 4	NM_001243233|TCF4|6925|transcription factor 4
hg19_v1_chr20_-_34329872_34330023	0.794896	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr15_+_40453209_40453250	0.794753	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr17_-_79828691_79828789	0.793626	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr10_-_119805673_119806415	0.79189	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr8_-_74659082_74659235	0.791591	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr1_-_193155723_193155742	0.790779	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg19_v1_chr7_-_124405680_124405913	0.789291	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v1_chr3_+_179322572_179322615	0.78922	SOX2.p2	NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v1_chr6_+_80714321_80714383	0.788969	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	AX775733|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg19_v1_chr14_+_71996041_71996041	0.788201	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chrX_+_101854095_101854275	0.78682	SOX2.p2	AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5	BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough
hg19_v1_chr12_-_21810733_21810752	0.785226	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr9_+_2622099_2622126	0.78391	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr6_-_167275657_167275800	0.780082	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr2_+_201170603_201170615	0.779875	SOX2.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr2_-_133427624_133427783	0.779818	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr10_+_118350470_118350641	0.778067	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg19_v1_chr20_+_19870209_19870245	0.776408	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chr5_+_133707105_133707288	0.772958	SOX2.p2	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B
hg19_v1_chr17_+_17608163_17608234	0.770177	SOX2.p2	
hg19_v1_chr6_-_108582124_108582163	0.769121	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chrX_+_108779009_108779020	0.768589	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr12_+_21168629_21168629	0.766241	SOX2.p2	AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)	NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v1_chr1_+_183774214_183774368	0.766224	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr15_-_65412175_65412292	0.762142	SOX2.p2	BT007395|PDCD7|10081|programmed cell death 7	BC016992|PDCD7|10081|programmed cell death 7
hg19_v1_chr7_-_37488554_37488556	0.759681	SOX2.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr3_-_160283311_160283329	0.757788	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr15_-_59665069_59665072	0.75774	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr2_+_24807345_24807409	0.756439	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg19_v1_chr4_-_76878558_76878565	0.75643	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg19_v1_chr2_-_133429069_133429151	0.755993	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr19_+_11998609_11998738	0.75551	SOX2.p2	BC051309|ZNF69|7620|zinc finger protein 69	NM_021915|ZNF69|7620|zinc finger protein 69	EU446913|ZNF69|7620|zinc finger protein 69
hg19_v1_chr12_-_46766563_46766644	0.754815	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr9_+_133710641_133710694	0.75048	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr3_+_156008775_156008845	0.749078	SOX2.p2	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v1_chr2_+_160568973_160569017	0.748671	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr5_+_152870083_152870448	0.747532	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg19_v1_chr16_+_2563977_2563986	0.747407	SOX2.p2	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr15_+_40453263_40453421	0.747301	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr1_+_172502012_172502273	0.747246	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr11_+_125753508_125753508	0.745761	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg19_v1_chr1_+_16090993_16091029	0.745064	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr5_+_86564044_86564089	0.744241	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr15_-_28567249_28567294	0.73961	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2
hg19_v1_chr7_+_27779809_27779809	0.738388	SOX2.p2	
hg19_v1_chr6_+_12290528_12290658	0.737837	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr7_-_15601574_15601639	0.737384	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg19_v1_chr6_+_34204690_34204721	0.735058	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr15_-_73925658_73925795	0.730152	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chr1_-_150241409_150241608	0.729542	SOX2.p2	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr19_-_20844312_20844412	0.729355	SOX2.p2	AK096221|ZNF626|199777|zinc finger protein 626	CR749233|ZNF626|199777|zinc finger protein 626	BC007116|ZNF626|199777|zinc finger protein 626	BX648764|ZNF626|199777|zinc finger protein 626	BC107803|ZNF626|199777|zinc finger protein 626	NM_001076675|ZNF626|199777|zinc finger protein 626	NM_145297|ZNF626|199777|zinc finger protein 626
hg19_v1_chr15_+_57210823_57210832	0.72862	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg19_v1_chr3_-_185655648_185655774	0.728456	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr2_-_142889269_142889269	0.727767	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr3_-_192445344_192445387	0.727303	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg19_v1_chr7_+_44836309_44836323	0.727054	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr8_+_76452202_76452227	0.726004	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma	HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr18_+_43304091_43304117	0.725523	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v1_chr9_-_140083010_140083021	0.717461	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg19_v1_chr11_-_71823737_71823825	0.717395	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr14_+_65878579_65878661	0.715084	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr6_+_83073501_83073565	0.712009	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr6_+_30594607_30594779	0.711744	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg19_v1_chr12_-_53558276_53558276	0.710876	SOX2.p2	AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase	NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase
hg19_v1_chr5_-_146833150_146833380	0.7066	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr1_+_25664785_25664884	0.706389	SOX2.p2	NM_014313|TMEM50A|23585|transmembrane protein 50A	AK311092|TMEM50A|23585|transmembrane protein 50A	AF087880|TMEM50A|23585|transmembrane protein 50A	AL136627|TMEM50A|23585|transmembrane protein 50A	AK299180|TMEM50A|23585|transmembrane protein 50A	AK311355|TMEM50A|23585|transmembrane protein 50A	AK312588|TMEM50A|23585|transmembrane protein 50A	AY358650|TMEM50A|23585|transmembrane protein 50A	AY071927|TMEM50A|23585|transmembrane protein 50A	BC007341|TMEM50A|23585|transmembrane protein 50A	BC066908|TMEM50A|23585|transmembrane protein 50A	AF081282|TMEM50A|23585|transmembrane protein 50A
hg19_v1_chr21_+_35190586_35190755	0.706266	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr17_+_76210329_76210465	0.704808	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	HM625836|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg19_v1_chr20_-_45976626_45976669	0.704707	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr9_-_132597540_132597559	0.703646	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr7_+_116502597_116502668	0.699585	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr7_+_27779810_27779828	0.697396	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr6_-_16761600_16761794	0.6961	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg19_v1_chr6_-_52860076_52860179	0.693267	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg19_v1_chr3_-_149095458_149095486	0.68988	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr19_+_10362886_10362910	0.689815	SOX2.p2	BC009858|MRPL4|51073|mitochondrial ribosomal protein L4
hg19_v1_chr2_+_3627725_3627765	0.689356	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg19_v1_chr7_+_74072055_74072190	0.68825	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg19_v1_chr17_+_39388714_39388751	0.687998	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr6_-_152957985_152958100	0.686715	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chrX_-_114252132_114252216	0.684897	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chr17_+_2240795_2241009	0.684762	SOX2.p2	NM_014853|SGSM2|9905|small G protein signaling modulator 2	AB007857|SGSM2|9905|small G protein signaling modulator 2	NM_001098509|SGSM2|9905|small G protein signaling modulator 2	BC039204|SGSM2|9905|small G protein signaling modulator 2	AK294955|SGSM2|9905|small G protein signaling modulator 2	AB275762|SGSM2|9905|small G protein signaling modulator 2	AB449878|SGSM2|9905|small G protein signaling modulator 2	AK304263|SGSM2|9905|small G protein signaling modulator 2
hg19_v1_chr10_+_114709963_114710641	0.680258	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v1_chr16_+_72698996_72699132	0.680132	SOX2.p2	
hg19_v1_chr15_+_33603162_33603176	0.678501	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr6_-_3227776_3227967	0.678017	SOX2.p2	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb	CR456788|TUBB2B|347733|tubulin, beta 2B class IIb	BC063610|TUBB2B|347733|tubulin, beta 2B class IIb	AK308806|TUBB2B|347733|tubulin, beta 2B class IIb	AK289433|TUBB2B|347733|tubulin, beta 2B class IIb	AK297568|TUBB2B|347733|tubulin, beta 2B class IIb	BC001352|TUBB2B|347733|tubulin, beta 2B class IIb	NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb
hg19_v1_chr1_+_111992105_111992127	0.677209	SOX2.p2	BC005960|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AY871272|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK313541|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK223018|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v1_chr5_+_140529619_140529838	0.675184	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr17_-_30669133_30669281	0.674558	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr10_+_91092238_91092329	0.674209	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr7_+_44795786_44795848	0.67221	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr7_+_39663140_39663193	0.672038	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chrX_+_135579237_135579398	0.671301	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr12_-_46766019_46766560	0.669171	SOX2.p2	AK291644|SLC38A2|54407|solute carrier family 38, member 2	BC040342|SLC38A2|54407|solute carrier family 38, member 2	AK001700|SLC38A2|54407|solute carrier family 38, member 2	AJ344099|SLC38A2|54407|solute carrier family 38, member 2	AF298897|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr11_-_129062092_129062092	0.668975	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr3_-_195270004_195270223	0.668605	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v1_chr1_-_1624180_1624254	0.668337	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr18_-_53303129_53303187	0.667913	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr20_-_4804067_4804321	0.666638	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr11_+_61008643_61008668	0.664757	SOX2.p2	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)
hg19_v1_chr5_+_72112417_72112564	0.663625	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg19_v1_chr17_+_37026111_37026117	0.663405	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg19_v1_chr12_-_56709831_56710127	0.662945	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr10_+_123754141_123754147	0.662901	SOX2.p2	AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr12_-_56709777_56709824	0.661059	SOX2.p2	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr2_+_11674241_11674241	0.65915	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr7_+_96745904_96745904	0.654999	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg19_v1_chr10_+_86131546_86131691	0.654796	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg19_v1_chr3_-_52804871_52804995	0.653405	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg19_v1_chr5_+_126112847_126112918	0.649009	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg19_v1_chr3_-_10547267_10547271	0.648854	SOX2.p2	AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr10_-_13390018_13390061	0.648452	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr7_+_116502529_116502585	0.648251	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr15_-_74495399_74495445	0.645993	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr17_+_57642885_57643089	0.645394	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v1_chr1_+_182808436_182808478	0.642485	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chrX_+_70503469_70503494	0.638359	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr3_-_183735617_183735765	0.636898	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr10_-_17171789_17171878	0.63667	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr5_-_134735565_134735581	0.636395	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr7_+_116660291_116660440	0.636124	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr3_+_136537860_136537979	0.633286	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr12_-_121734474_121734541	0.632964	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chrX_+_41583407_41583433	0.63256	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg19_v1_chr3_-_63849504_63849808	0.631152	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr3_-_56698073_56698073	0.628879	SOX2.p2	BC029354|FAM208A|23272|family with sequence similarity 208, member A	NM_015224|FAM208A|23272|family with sequence similarity 208, member A
hg19_v1_chr12_-_50595303_50595315	0.628712	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr17_-_17480325_17480354	0.628697	SOX2.p2	CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr22_+_19701968_19702117	0.627767	SOX2.p2	NM_002688|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg19_v1_chr15_-_73051650_73051778	0.626886	SOX2.p2	
hg19_v1_chr1_-_203155867_203155909	0.626664	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr5_-_134734796_134734833	0.626565	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr9_+_102677457_102677463	0.624508	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg19_v1_chr12_-_56709656_56709772	0.623604	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr1_+_150039815_150039913	0.623283	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr1_-_203155813_203155825	0.622892	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr3_+_187930720_187930720	0.620704	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr8_+_146277830_146277971	0.618807	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr5_+_95067511_95067562	0.61729	SOX2.p2	
hg19_v1_chr16_+_58498216_58498308	0.616225	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr7_+_23145916_23145916	0.616179	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chr11_+_93862143_93862159	0.613507	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr8_-_42623928_42623928	0.612925	SOX2.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr11_+_94800316_94800372	0.611102	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr17_-_47492216_47492280	0.610794	SOX2.p2	S85655|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg19_v1_chr2_+_109204777_109204794	0.609393	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr3_-_13057130_13057306	0.607996	SOX2.p2	
hg19_v1_chr17_+_53344966_53345007	0.607882	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg19_v1_chr17_+_68071386_68071475	0.607194	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr20_-_61847446_61847601	0.607187	SOX2.p2	BC050284|YTHDF1|54915|YTH domain family, member 1	NM_017798|YTHDF1|54915|YTH domain family, member 1
hg19_v1_chr3_-_149095413_149095452	0.605977	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr21_-_34883620_34883747	0.605189	SOX2.p2	M32082|GART|2618|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
hg19_v1_chr19_+_16244837_16244837	0.603315	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg19_v1_chr17_+_79650961_79651022	0.60325	SOX2.p2	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr1_+_205197031_205197136	0.603108	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr20_+_1246959_1246998	0.602638	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr2_+_204571379_204571419	0.600153	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg19_v1_chr19_+_45394459_45394509	0.599221	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v1_chr16_-_51184507_51184507	0.597591	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg19_v1_chr17_+_79651035_79651041	0.597414	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr20_+_2844688_2844879	0.597149	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v1_chr14_-_21572789_21572862	0.5946	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg19_v1_chr7_+_74072007_74072036	0.593887	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg19_v1_chr3_-_125775609_125775617	0.593085	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr13_+_98795710_98795727	0.591717	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr16_+_8806825_8806846	0.590303	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr11_-_61734896_61735059	0.588701	SOX2.p2	DQ891113|FTH1|2495|ferritin, heavy polypeptide 1	DQ894293|FTH1|2495|ferritin, heavy polypeptide 1	AF088851|FTH1|2495|ferritin, heavy polypeptide 1	M12937|FTH1|2495|ferritin, heavy polypeptide 1	BC015156|FTH1|2495|ferritin, heavy polypeptide 1	M11146|FTH1|2495|ferritin, heavy polypeptide 1	X00318|FTH1|2495|ferritin, heavy polypeptide 1	M97164|FTH1|2495|ferritin, heavy polypeptide 1	BC016857|FTH1|2495|ferritin, heavy polypeptide 1	BC001399|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr11_+_114271294_114271368	0.585767	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr1_+_155036201_155036299	0.585383	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr14_+_91580967_91581087	0.584146	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr1_+_145507556_145507666	0.579773	SOX2.p2	NM_005105|RBM8A|9939|RNA binding motif protein 8A	BC071577|RBM8A|9939|RNA binding motif protein 8A	BC017088|RBM8A|9939|RNA binding motif protein 8A	AF198620|RBM8A|9939|RNA binding motif protein 8A	AF182415|RBM8A|9939|RNA binding motif protein 8A	BC017770|RBM8A|9939|RNA binding motif protein 8A	AK075009|RBM8A|9939|RNA binding motif protein 8A	AF161463|RBM8A|9939|RNA binding motif protein 8A	AF231511|RBM8A|9939|RNA binding motif protein 8A	AF127761|RBM8A|9939|RNA binding motif protein 8A	AF299118|RBM8A|9939|RNA binding motif protein 8A	CR541805|RBM8A|9939|RNA binding motif protein 8A	CR541823|RBM8A|9939|RNA binding motif protein 8A	GQ129283|RBM8A|9939|RNA binding motif protein 8A	GQ129284|RBM8A|9939|RNA binding motif protein 8A
hg19_v1_chr7_-_23509972_23510024	0.578409	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg19_v1_chr18_+_66465316_66465369	0.577429	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr1_+_110882057_110882057	0.575611	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr7_+_48211054_48211056	0.574406	SOX2.p2	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13	AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13	NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13
hg19_v1_chr12_+_22199219_22199239	0.574105	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr8_+_61429724_61429777	0.57399	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr14_+_55168831_55168947	0.5726	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg19_v1_chr2_+_75059781_75059781	0.572109	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg19_v1_chr2_-_27545901_27545984	0.571086	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg19_v1_chr7_+_116660263_116660272	0.568763	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr12_-_21810769_21810778	0.568653	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr14_-_88737160_88737273	0.567379	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr1_-_203155910_203155942	0.56533	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr17_-_40169400_40169446	0.565244	SOX2.p2	AB209834|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ893064|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ896317|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK291047|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC003601|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	U46571|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AM393511|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC011837|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK296602|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK316081|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr15_+_43663350_43663552	0.565214	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg19_v1_chr16_-_67970734_67970779	0.563541	SOX2.p2	AK312208|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	Y13640|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	AK225658|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	AK298012|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	NM_002801|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10
hg19_v1_chr7_+_128095881_128096051	0.561253	SOX2.p2	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated	NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated	AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated
hg19_v1_chr13_+_78109808_78109894	0.561187	SOX2.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr14_-_88793250_88793255	0.559958	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr20_-_1472004_1472067	0.555862	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr6_+_34204647_34204654	0.555261	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr6_+_64286348_64286872	0.554995	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr7_+_18548899_18548948	0.554919	SOX2.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr5_+_140571903_140572125	0.55151	SOX2.p2	AK056391|PCDHB10|56126|protocadherin beta 10	BC031837|PCDHB10|56126|protocadherin beta 10	NM_018930|PCDHB10|56126|protocadherin beta 10	AY358720|PCDHB10|56126|protocadherin beta 10	AF152489|PCDHB10|56126|protocadherin beta 10	AF217748|PCDHB10|56126|protocadherin beta 10
hg19_v1_chr4_-_85887543_85887543	0.550809	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg19_v1_chr1_-_54871681_54871895	0.550747	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg19_v1_chr2_-_106810781_106810830	0.550219	SOX2.p2	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr22_-_26875376_26875550	0.549356	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg19_v1_chr7_+_27779706_27779742	0.547091	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr10_+_28822428_28822438	0.547007	SOX2.p2	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr14_-_75600111_75600130	0.546948	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v1_chr2_-_203776948_203776948	0.544698	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chr17_-_3571819_3571878	0.542831	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr2_-_106810756_106810760	0.542555	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr3_-_38992051_38992051	0.540709	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v1_chr20_+_62152101_62152166	0.539361	SOX2.p2	BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg19_v1_chr2_-_37899227_37899552	0.538637	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr5_+_140514787_140515017	0.538109	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg19_v1_chr2_-_106810735_106810755	0.532604	SOX2.p2	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr6_+_10555948_10555948	0.532497	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v1_chr8_+_9911797_9911961	0.532378	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr19_-_42463500_42463541	0.530284	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr12_+_12938540_12938614	0.530024	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg19_v1_chr12_+_65563339_65563370	0.528698	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg19_v1_chr17_+_79651042_79651048	0.526626	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr16_+_67906924_67906967	0.524061	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr15_-_37392358_37392755	0.523877	SOX2.p2	AK056216|MEIS2|4212|Meis homeobox 2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2
hg19_v1_chr4_+_71859391_71859552	0.519424	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	JF806429|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg19_v1_chr1_+_11072678_11072743	0.519012	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg19_v1_chr7_+_39663199_39663224	0.518793	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr22_+_39052671_39052721	0.518548	SOX2.p2	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)	AL050345|CBY1|25776|chibby homolog 1 (Drosophila)	BC016139|CBY1|25776|chibby homolog 1 (Drosophila)	AF331041|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr20_-_1472168_1472232	0.518504	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr1_+_87794150_87794164	0.518305	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg19_v1_chr11_+_101983170_101983244	0.517622	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr17_+_28804420_28804447	0.51726	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg19_v1_chr8_-_17942410_17942507	0.516716	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr1_-_224033603_224033644	0.515527	SOX2.p2	BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2	AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2	U58334|TP53BP2|7159|tumor protein p53 binding protein, 2	BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2
hg19_v1_chr9_+_132934685_132934942	0.514451	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg19_v1_chr19_+_41770336_41770347	0.513367	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr17_+_44101549_44101592	0.51332	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr16_-_12010518_12010518	0.511736	SOX2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chr17_+_79651072_79651096	0.510961	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr11_+_69455938_69455962	0.510096	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg19_v1_chr3_-_47823304_47823332	0.508942	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr6_-_53213586_53213693	0.506895	SOX2.p2	AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr14_+_64971504_64971542	0.506531	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr5_-_78282356_78282356	0.506245	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg19_v1_chr14_+_20923705_20923804	0.506244	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr3_-_50360109_50360280	0.504482	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr5_+_68666861_68666915	0.50427	SOX2.p2	NM_133340|RAD17|5884|RAD17 homolog (S. pombe)	NM_133341|RAD17|5884|RAD17 homolog (S. pombe)	AJ001642|RAD17|5884|RAD17 homolog (S. pombe)	AJ004977|RAD17|5884|RAD17 homolog (S. pombe)	AF098533|RAD17|5884|RAD17 homolog (S. pombe)	AF098534|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr7_+_20686965_20687217	0.503653	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v1_chr10_+_93558281_93558447	0.503441	SOX2.p2	AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr3_-_183602658_183602667	0.503208	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr10_+_101088794_101088855	0.502382	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr9_-_36400212_36400295	0.502272	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr1_+_29063443_29063632	0.501486	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr19_-_12912602_12912727	0.500768	SOX2.p2	BC000452|PRDX2|7001|peroxiredoxin 2	BC003022|PRDX2|7001|peroxiredoxin 2	BC064138|PRDX2|7001|peroxiredoxin 2	Z22548|PRDX2|7001|peroxiredoxin 2	AK289485|PRDX2|7001|peroxiredoxin 2	AK293957|PRDX2|7001|peroxiredoxin 2	BC039428|PRDX2|7001|peroxiredoxin 2	AK022395|PRDX2|7001|peroxiredoxin 2	NM_005809|PRDX2|7001|peroxiredoxin 2	NM_181738|PRDX2|7001|peroxiredoxin 2
hg19_v1_chr3_+_169492051_169492289	0.498698	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg19_v1_chr5_+_179921423_179921493	0.496365	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr9_-_139292888_139292888	0.495876	SOX2.p2	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa
hg19_v1_chr3_-_14989616_14989659	0.494758	SOX2.p2	BC008609|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr2_+_231729501_231729620	0.494676	SOX2.p2	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr2_+_27440342_27440417	0.493917	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr8_-_74659056_74659079	0.49239	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|uncharacterized LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr1_+_151227237_151227258	0.491604	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr2_+_99953749_99954017	0.490781	SOX2.p2	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg19_v1_chr2_+_46926049_46926098	0.489839	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr2_+_201936461_201936756	0.489514	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v1_chr3_-_11685395_11685398	0.489418	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr1_+_209757044_209757077	0.488983	SOX2.p2	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG
hg19_v1_chr5_+_67586466_67586627	0.48871	SOX2.p2	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr6_+_44187241_44187471	0.487626	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr13_-_36944289_36944316	0.486843	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr17_-_79478236_79478585	0.48559	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chr17_-_42908178_42908178	0.482805	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg19_v1_chr5_+_147774274_147774339	0.482756	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg19_v1_chr3_-_52312655_52312658	0.482186	SOX2.p2	NM_025222|WDR82|80335|WD repeat domain 82
hg19_v1_chr2_+_208394756_208394806	0.4801	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr2_-_3605849_3605909	0.477113	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg19_v1_chr17_-_17485691_17485724	0.47619	SOX2.p2	AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr3_-_126327397_126327397	0.473126	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr15_-_34635306_34635364	0.472048	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg19_v1_chr3_+_47844398_47844625	0.472024	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr2_+_166095911_166095954	0.469214	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chr17_+_7486964_7486964	0.468733	SOX2.p2	NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr16_+_8807426_8807470	0.468687	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr19_+_58361180_58361211	0.466391	SOX2.p2	NM_001204817|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587
hg19_v1_chr1_+_29063132_29063435	0.464708	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr3_+_157827937_157827944	0.463898	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr12_-_46663207_46663207	0.463332	SOX2.p2	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1	NM_030674|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chrX_+_71364033_71364033	0.462536	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg19_v1_chr11_-_107729523_107729653	0.460702	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr1_-_52343690_52343711	0.460574	SOX2.p2	AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr18_+_55711388_55711685	0.457729	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr10_+_85899184_85899331	0.456335	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein
hg19_v1_chr5_+_70944968_70945006	0.454795	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg19_v1_chr6_+_148663728_148663798	0.454349	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr17_+_52978022_52978290	0.453787	SOX2.p2	NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1	AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1	AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1	AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1	AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1	AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1	AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1	BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1
hg19_v1_chr3_+_98250742_98250877	0.45019	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg19_v1_chr14_-_105444693_105444723	0.449422	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr18_+_32073245_32073284	0.449232	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr1_+_59775749_59775758	0.449042	SOX2.p2	NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing	AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing
hg19_v1_chr7_+_39663257_39663359	0.448721	SOX2.p2	AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr2_+_160569027_160569054	0.448207	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr19_-_42569921_42569956	0.448148	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr5_+_140501399_140501421	0.446972	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr12_-_123706393_123706440	0.446484	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg19_v1_chr1_+_148558187_148558268	0.445859	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg19_v1_chr4_+_54292035_54292107	0.445606	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr11_-_66206260_66206313	0.445459	SOX2.p2	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg19_v1_chr20_+_35234210_35234398	0.443459	SOX2.p2	BC004446|C20orf24|55969|chromosome 20 open reading frame 24	BC001871|C20orf24|55969|chromosome 20 open reading frame 24	AF274936|C20orf24|55969|chromosome 20 open reading frame 24	S83364|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr3_-_183602668_183602689	0.441349	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr1_-_52344010_52344058	0.440885	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr7_+_77469446_77469572	0.440748	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr19_-_55690717_55690757	0.439646	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg19_v1_chr22_+_39052628_39052669	0.439417	SOX2.p2	AK307265|CBY1|25776|chibby homolog 1 (Drosophila)	AK311928|CBY1|25776|chibby homolog 1 (Drosophila)	NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)	NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chrX_+_47053271_47053296	0.438457	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg19_v1_chr7_+_73868111_73868218	0.43792	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr1_-_43855473_43855484	0.437741	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg19_v1_chr11_-_35441099_35441107	0.437443	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr1_+_10490429_10490557	0.436458	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chrX_-_43832920_43832920	0.436392	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr20_+_30945988_30946353	0.436247	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg19_v1_chr4_-_83294806_83294938	0.435676	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr17_-_26926044_26926071	0.43433	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr4_+_154074269_154074269	0.433442	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr6_-_100016403_100016511	0.433391	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg19_v1_chr13_+_98795410_98795433	0.432675	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr10_+_26505235_26505235	0.426999	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v1_chr7_+_120965420_120965420	0.424161	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg19_v1_chr6_+_88299784_88299891	0.424042	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg19_v1_chr14_-_54908035_54908197	0.423839	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr10_-_27443279_27443304	0.423686	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr7_+_129847699_129847717	0.422039	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg19_v1_chr6_+_42982013_42982022	0.421307	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr6_-_38670882_38670902	0.420216	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I
hg19_v1_chr2_+_73114501_73114560	0.419949	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg19_v1_chr18_-_45663667_45663731	0.419449	SOX2.p2	AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C	NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C	EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C
hg19_v1_chr5_+_1801493_1801531	0.415379	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg19_v1_chr6_+_42981986_42981992	0.414959	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr3_+_111718006_111718269	0.413461	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg19_v1_chr17_-_2304217_2304415	0.413032	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr11_-_112034671_112034846	0.412433	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg19_v1_chr11_+_61129831_61129878	0.411853	SOX2.p2	AK027724|TMEM138|51524|transmembrane protein 138	AK307371|TMEM138|51524|transmembrane protein 138	AF151030|TMEM138|51524|transmembrane protein 138	AK303219|TMEM138|51524|transmembrane protein 138	BC005201|TMEM138|51524|transmembrane protein 138	AF151032|TMEM138|51524|transmembrane protein 138
hg19_v1_chr12_-_58146025_58146107	0.411456	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr11_-_6704517_6704631	0.410567	SOX2.p2	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg19_v1_chr2_+_86947387_86947422	0.409917	SOX2.p2	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr2_-_65357191_65357248	0.408218	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg19_v1_chr19_-_42463437_42463499	0.408044	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr16_+_21611132_21611177	0.407094	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg19_v1_chr1_-_150587879_150587959	0.406494	SOX2.p2	
hg19_v1_chr22_+_20105145_20105170	0.405373	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr5_-_54603401_54603522	0.405274	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg19_v1_chr5_+_140560979_140560979	0.404924	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg19_v1_chr19_+_41770329_41770330	0.404628	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr17_-_56406120_56406151	0.403745	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg19_v1_chr6_-_127664511_127664535	0.402512	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr10_-_27443309_27443348	0.400479	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_001253866|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr22_-_42084819_42084912	0.399747	SOX2.p2	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v1_chr3_-_63849456_63849488	0.39956	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr10_+_123922940_123923011	0.39941	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr20_+_47835964_47835984	0.399378	SOX2.p2	BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v1_chr8_+_92114846_92114872	0.397316	SOX2.p2	AK097393|LRRC69|100130742|leucine rich repeat containing 69	NM_001129890|LRRC69|100130742|leucine rich repeat containing 69	AK130865|LRRC69|100130742|leucine rich repeat containing 69
hg19_v1_chr14_+_54976545_54976677	0.395468	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg19_v1_chr8_-_53322200_53322441	0.393271	SOX2.p2	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v1_chr1_-_52344377_52344400	0.391551	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr10_-_27443138_27443277	0.391268	SOX2.p2	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr3_-_160283071_160283118	0.3905	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr8_-_103876390_103876400	0.390348	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr3_-_123339178_123339390	0.388897	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr11_-_790103_790125	0.387079	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr6_-_100016517_100016689	0.385518	SOX2.p2	BC010135|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg19_v1_chr2_-_169746921_169746962	0.385416	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr3_+_184038050_184038206	0.383857	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr3_-_45267804_45267846	0.382292	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr17_-_79478956_79479000	0.381178	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chr14_+_67827042_67827058	0.380428	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr2_+_208394692_208394750	0.379797	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chrX_+_123095598_123095677	0.379053	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg19_v1_chr1_-_143767849_143767880	0.378965	SOX2.p2	HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg19_v1_chr4_-_83295136_83295171	0.377382	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr14_-_54955714_54955796	0.376787	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr7_+_73498106_73498146	0.37599	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr7_-_82792127_82792345	0.374462	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg19_v1_chr1_+_93913566_93913878	0.374434	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg19_v1_chr20_-_37063914_37064031	0.373614	SOX2.p2	BC012894|LOC388796|388796|uncharacterized LOC388796	BC052370|LOC388796|388796|uncharacterized LOC388796	BC032119|LOC388796|388796|uncharacterized LOC388796	BX640887|LOC388796|388796|uncharacterized LOC388796
hg19_v1_chr8_+_23145621_23145736	0.372925	SOX2.p2	AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1	BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1
hg19_v1_chr11_-_115375065_115375296	0.372707	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr3_-_183602690_183602726	0.371071	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr14_+_62162042_62162338	0.370125	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr12_+_27863705_27863760	0.369816	SOX2.p2	NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35	NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35	AF182422|MRPS35|60488|mitochondrial ribosomal protein S35
hg19_v1_chr2_+_85132999_85133125	0.368602	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10
hg19_v1_chr14_-_74180341_74181182	0.364316	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg19_v1_chr19_-_50432952_50433054	0.364308	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr14_+_69658215_69658290	0.364282	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr16_-_15736964_15737022	0.362156	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg19_v1_chr3_-_129158675_129158761	0.360615	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr17_-_39538635_39538654	0.360599	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg19_v1_chr3_+_135741576_135741660	0.359746	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr8_+_23145574_23145620	0.358116	SOX2.p2	NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1	AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1
hg19_v1_chr2_+_207406815_207406857	0.357977	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr20_-_34542385_34542547	0.357527	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr16_-_18573334_18573449	0.357464	SOX2.p2	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg19_v1_chr13_+_96085852_96085857	0.357335	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr18_+_3447607_3447627	0.356049	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr6_-_75953511_75953643	0.353658	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg19_v1_chr14_-_50999178_50999442	0.353633	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v1_chr19_+_41770285_41770328	0.352342	SOX2.p2	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr5_-_147162251_147162257	0.351868	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr2_+_61292999_61293036	0.35182	SOX2.p2	AK131267|KIAA1841|84542|KIAA1841	NM_001129993|KIAA1841|84542|KIAA1841	BC039298|KIAA1841|84542|KIAA1841	AK309749|KIAA1841|84542|KIAA1841
hg19_v1_chr20_-_23618382_23618616	0.351159	SOX2.p2	BX647523|CST3|1471|cystatin C	BT006839|CST3|1471|cystatin C	CR541988|CST3|1471|cystatin C	CR542018|CST3|1471|cystatin C	DQ891439|CST3|1471|cystatin C	EU176584|CST3|1471|cystatin C	AB587083|CST3|1471|cystatin C	BC013083|CST3|1471|cystatin C	NM_000099|CST3|1471|cystatin C	X05607|CST3|1471|cystatin C	BC110305|CST3|1471|cystatin C	AK312213|CST3|1471|cystatin C
hg19_v1_chr6_-_47277246_47277283	0.351028	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr19_+_9938587_9938639	0.34925	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg19_v1_chr19_-_39303739_39303739	0.348579	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr13_-_103054027_103054123	0.34825	SOX2.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg19_v1_chr3_+_100053544_100053671	0.346949	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg19_v1_chr14_+_93389444_93389444	0.344408	SOX2.p2	NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)
hg19_v1_chr8_+_146277789_146277826	0.342224	SOX2.p2	NM_023080|C8orf33|65265|chromosome 8 open reading frame 33	AK024642|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr1_+_231664398_231664465	0.340602	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg19_v1_chr20_+_35234077_35234143	0.340531	SOX2.p2	NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr17_-_1588130_1588178	0.340272	SOX2.p2	BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg19_v1_chr6_-_38670871_38670880	0.339804	SOX2.p2	BC015934|GLO1|2739|glyoxalase I
hg19_v1_chr4_-_168155691_168155717	0.339383	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v1_chr3_+_184038445_184038482	0.338593	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr11_-_82997376_82997434	0.337384	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg19_v1_chr17_-_37350051_37350135	0.336705	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr2_+_191301020_191301120	0.333272	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr1_-_179112178_179112223	0.332919	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg19_v1_chr8_-_144241725_144241754	0.332023	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg19_v1_chr3_-_186857188_186857324	0.331321	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr20_-_34330093_34330176	0.330496	SOX2.p2	BC008204|RBM39|9584|RNA binding motif protein 39	U92990|RBM39|9584|RNA binding motif protein 39	BC141835|RBM39|9584|RNA binding motif protein 39	BC158172|RBM39|9584|RNA binding motif protein 39	AK303910|RBM39|9584|RNA binding motif protein 39	AL833168|RBM39|9584|RNA binding motif protein 39	AK299165|RBM39|9584|RNA binding motif protein 39	CR749443|RBM39|9584|RNA binding motif protein 39	AK299678|RBM39|9584|RNA binding motif protein 39	BX640714|RBM39|9584|RNA binding motif protein 39	BX640812|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr20_+_35234152_35234175	0.329741	SOX2.p2	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr19_-_45996470_45996517	0.329328	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg19_v1_chr10_+_90424145_90424215	0.329004	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg19_v1_chr15_-_41694619_41694705	0.32888	SOX2.p2	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
hg19_v1_chr19_-_58609606_58609729	0.327281	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr9_-_124989755_124989864	0.324557	SOX2.p2	AM392697|LHX6|26468|LIM homeobox 6	AM393362|LHX6|26468|LIM homeobox 6	EU446700|LHX6|26468|LIM homeobox 6	AB031041|LHX6|26468|LIM homeobox 6	AB031042|LHX6|26468|LIM homeobox 6	AK313808|LHX6|26468|LIM homeobox 6	AK289827|LHX6|26468|LIM homeobox 6	NM_001242334|LHX6|26468|LIM homeobox 6
hg19_v1_chr19_+_3572903_3572949	0.32441	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr16_+_81069316_81069710	0.324258	SOX2.p2	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg19_v1_chr8_+_79578258_79578383	0.322585	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg19_v1_chr6_+_42982002_42982011	0.322541	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr12_+_101988746_101988846	0.320402	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr16_+_3533475_3533617	0.320365	SOX2.p2	AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v1_chr5_-_88178964_88179049	0.318752	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr5_+_61602236_61602304	0.317931	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr5_+_156693051_156693454	0.315877	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr16_+_14927586_14927700	0.315513	SOX2.p2	NM_014287|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1
hg19_v1_chr16_+_24551672_24552056	0.315297	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr11_+_94800397_94800420	0.313186	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr5_-_140053126_140053170	0.312651	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg19_v1_chr5_-_83680590_83680738	0.31193	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr1_-_52344406_52344424	0.309485	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr6_-_79787784_79787854	0.309353	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr11_+_120973374_120973374	0.308057	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg19_v1_chr14_+_32183774_32183774	0.30797	SOX2.p2	AK093789|NUBPL|80224|nucleotide binding protein-like	NM_001201574|NUBPL|80224|nucleotide binding protein-like
hg19_v1_chr2_+_27440233_27440275	0.307704	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr5_+_126112819_126112844	0.305403	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg19_v1_chr17_-_1588098_1588118	0.304854	SOX2.p2	AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg19_v1_chrY_-_21154560_21154979	0.303917	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr12_-_122985471_122985566	0.303538	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg19_v1_chr19_+_50180408_50180491	0.3032	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1	NM_001207042|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr3_+_184032849_184033283	0.300973	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr1_-_109935869_109935978	0.300551	SOX2.p2	AK310147|SORT1|6272|sortilin 1	AK301548|SORT1|6272|sortilin 1	NM_001205228|SORT1|6272|sortilin 1
hg19_v1_chr19_+_3572958_3572999	0.300277	SOX2.p2	AK314201|HMG20B|10362|high mobility group 20B	AK090733|HMG20B|10362|high mobility group 20B	AK310601|HMG20B|10362|high mobility group 20B	AF318366|HMG20B|10362|high mobility group 20B
hg19_v1_chr10_+_13203547_13203589	0.29979	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr2_-_96874569_96874628	0.299016	SOX2.p2	NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg19_v1_chr6_+_42981975_42981984	0.298915	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr11_-_14380030_14380072	0.298428	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr3_+_45730914_45730957	0.298302	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v1_chr11_+_34073188_34073238	0.298051	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg19_v1_chr12_-_110906007_110906053	0.297257	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr9_-_15510899_15511022	0.295976	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg19_v1_chr5_-_142783975_142784089	0.295804	SOX2.p2	AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v1_chr17_+_30677138_30677175	0.295741	SOX2.p2	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg19_v1_chr3_-_17741511_17741511	0.295286	SOX2.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg19_v1_chr11_-_118972529_118972588	0.29528	SOX2.p2	AK225994|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC000325|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC047771|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK301973|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK312783|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
hg19_v1_chr19_+_50180492_50180551	0.295091	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr13_+_24553919_24553948	0.29468	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr17_-_56595192_56595294	0.294283	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr11_-_107729492_107729519	0.292015	SOX2.p2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr1_+_228285594_228285686	0.290783	SOX2.p2	BC010415|ARF1|375|ADP-ribosylation factor 1
hg19_v1_chr15_-_58306185_58306294	0.290121	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg19_v1_chr3_-_129158849_129158894	0.290053	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr6_+_42982027_42982066	0.288523	SOX2.p2	BC001793|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr1_-_52344433_52344608	0.288264	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr19_+_3572950_3572957	0.288222	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr2_+_204571197_204571363	0.288209	SOX2.p2	NM_001243077|CD28|940|CD28 molecule	NM_001243078|CD28|940|CD28 molecule	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg19_v1_chr17_-_26926015_26926038	0.287829	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr12_+_70759974_70760559	0.287803	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr5_+_69321071_69321259	0.287372	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr1_+_87170222_87170280	0.287249	SOX2.p2	NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr3_-_45267620_45267797	0.28352	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr7_+_18535351_18535448	0.28243	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_001204145|HDAC9|9734|histone deacetylase 9	NM_001204146|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg19_v1_chr6_+_42981955_42981958	0.282052	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr12_-_7818467_7818501	0.281927	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg19_v1_chr7_+_23286401_23286410	0.281237	SOX2.p2	AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chrX_-_105282714_105282745	0.28102	SOX2.p2	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
hg19_v1_chr2_+_96068423_96068535	0.27988	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg19_v1_chr12_-_18243052_18243113	0.279399	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr11_+_73498913_73498939	0.279075	SOX2.p2	AF161408|MRPL48|51642|mitochondrial ribosomal protein L48	AK297746|MRPL48|51642|mitochondrial ribosomal protein L48	NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48	BC009764|MRPL48|51642|mitochondrial ribosomal protein L48	AK309219|MRPL48|51642|mitochondrial ribosomal protein L48	AK310005|MRPL48|51642|mitochondrial ribosomal protein L48
hg19_v1_chr6_-_42714547_42714557	0.278889	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr7_+_73498149_73498162	0.278594	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr4_+_113558611_113558725	0.27857	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chr17_-_2240677_2240800	0.276881	SOX2.p2	NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v1_chr10_+_70939980_70940050	0.276812	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg19_v1_chr17_-_46682333_46682356	0.276366	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg19_v1_chr10_-_92680784_92680848	0.276317	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr20_-_2644777_2644892	0.275778	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr6_-_75953449_75953509	0.275697	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg19_v1_chr8_-_103876345_103876374	0.275097	SOX2.p2	AK095493|AZIN1|51582|antizyme inhibitor 1	D88674|AZIN1|51582|antizyme inhibitor 1	BC013420|AZIN1|51582|antizyme inhibitor 1	BC019279|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr6_+_112375277_112375558	0.274068	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg19_v1_chr19_+_12949258_12949385	0.272422	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg19_v1_chr2_+_102927961_102928022	0.272269	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg19_v1_chr3_+_127347966_127348098	0.271246	SOX2.p2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2
hg19_v1_chr5_+_70196489_70196677	0.271243	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr6_+_148663953_148664027	0.271008	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr3_-_129158779_129158816	0.269226	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr5_-_43313581_43313612	0.267651	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr8_+_143545376_143545376	0.266616	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg19_v1_chr22_+_20105068_20105075	0.266221	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr9_-_86595167_86595183	0.265404	SOX2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr2_-_153573858_153573983	0.264068	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v1_chr11_-_61560052_61560088	0.263959	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg19_v1_chrX_-_10535476_10535642	0.263777	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr20_+_57556295_57556319	0.26352	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chrX_-_15872882_15872891	0.262237	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr7_-_140179224_140179316	0.262098	SOX2.p2	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr1_-_101360337_101360403	0.261796	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr9_-_134955243_134955257	0.259171	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr17_-_3571905_3571972	0.257986	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr22_-_18257238_18257430	0.257913	SOX2.p2	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_001244569|BID|637|BH3 interacting domain death agonist	NM_001244570|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist	NM_001244567|BID|637|BH3 interacting domain death agonist
hg19_v1_chr6_-_31830551_31830592	0.256806	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg19_v1_chr19_-_39303520_39303586	0.256737	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr11_-_65326129_65326252	0.255663	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr11_+_65819803_65819877	0.255495	SOX2.p2	NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa
hg19_v1_chr8_-_144241678_144241701	0.253172	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg19_v1_chr1_-_182360181_182360261	0.252782	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr10_-_72142344_72142385	0.252599	SOX2.p2	AK094734|LRRC20|55222|leucine rich repeat containing 20	AK001613|LRRC20|55222|leucine rich repeat containing 20	AK001706|LRRC20|55222|leucine rich repeat containing 20	NM_018205|LRRC20|55222|leucine rich repeat containing 20	NM_018239|LRRC20|55222|leucine rich repeat containing 20
hg19_v1_chr12_+_98909331_98909404	0.252571	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg19_v1_chr14_+_79745653_79745755	0.251412	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg19_v1_chr19_-_55691468_55691719	0.251361	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg19_v1_chr3_-_149095333_149095399	0.250214	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr12_-_110906056_110906088	0.24884	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr12_-_58146118_58146229	0.248457	SOX2.p2	BC005864|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr9_-_34620499_34620533	0.247398	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr2_-_3605926_3605958	0.247234	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1
hg19_v1_chr22_-_38713217_38713366	0.246755	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr22_-_18257221_18257225	0.246339	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg19_v1_chr14_+_50234907_50234935	0.246201	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr17_+_26646120_26646267	0.246189	SOX2.p2	NM_014573|TMEM97|27346|transmembrane protein 97	L19183|TMEM97|27346|transmembrane protein 97	AK299511|TMEM97|27346|transmembrane protein 97	AK307678|TMEM97|27346|transmembrane protein 97	BC017362|TMEM97|27346|transmembrane protein 97	BC091504|TMEM97|27346|transmembrane protein 97	AK293331|TMEM97|27346|transmembrane protein 97
hg19_v1_chr10_-_13390189_13390345	0.246046	SOX2.p2	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr2_+_219524446_219524504	0.245187	SOX2.p2	BC000416|BCS1L|617|BCS1-like (S. cerevisiae)	BC007500|BCS1L|617|BCS1-like (S. cerevisiae)	AF026849|BCS1L|617|BCS1-like (S. cerevisiae)	AK096210|BCS1L|617|BCS1-like (S. cerevisiae)
hg19_v1_chrX_+_56589961_56590141	0.244182	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg19_v1_chr2_-_128615691_128615704	0.243838	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr15_+_22955754_22955754	0.242654	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr14_-_58893867_58893909	0.242374	SOX2.p2	AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr17_-_79829272_79829284	0.242111	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr11_+_73019662_73019668	0.239666	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v1_chr3_-_149375584_149375887	0.236	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr20_+_47835954_47835963	0.235762	SOX2.p2	AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v1_chr17_-_9479124_9479138	0.234987	SOX2.p2	BT007319|STX8|9482|syntaxin 8	DQ890985|STX8|9482|syntaxin 8	DQ894161|STX8|9482|syntaxin 8
hg19_v1_chr10_-_5446781_5446796	0.233414	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr17_+_34171647_34171928	0.232732	SOX2.p2	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg19_v1_chr4_-_111119752_111119819	0.232499	SOX2.p2	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6	AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6
hg19_v1_chr3_-_149086884_149086954	0.232314	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr22_+_23522551_23522690	0.231042	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg19_v1_chrX_-_16888462_16888533	0.231035	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr19_+_19626535_19626595	0.230373	SOX2.p2	AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg19_v1_chr9_-_99329092_99329202	0.22971	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg19_v1_chr9_-_132597500_132597538	0.229567	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr2_-_24307179_24307212	0.228499	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3
hg19_v1_chr6_+_42981840_42981954	0.228358	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr22_+_20105095_20105118	0.22757	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chr7_-_122839999_122840024	0.226964	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr15_+_91447419_91447419	0.226529	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg19_v1_chr20_+_57556322_57556377	0.225977	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr10_+_18429605_18429809	0.224731	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr22_+_18632704_18632764	0.223865	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr3_+_138067969_138067969	0.22325	SOX2.p2	NM_001252090|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr13_+_32605436_32605446	0.222132	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg19_v1_chr6_-_79787939_79788175	0.221365	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chrX_+_142967172_142967172	0.221235	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr12_+_117348710_117348862	0.220941	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg19_v1_chr4_-_89080010_89080065	0.220434	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr5_+_180467224_180467250	0.220254	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg19_v1_chr6_+_42982221_42982242	0.220194	SOX2.p2	NM_001242872|KLHDC3|116138|kelch domain containing 3	AK302336|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr20_-_30310597_30310736	0.219501	SOX2.p2	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg19_v1_chr11_-_61735067_61735107	0.219003	SOX2.p2	BC020300|FTH1|2495|ferritin, heavy polypeptide 1	BC015946|FTH1|2495|ferritin, heavy polypeptide 1	BC063514|FTH1|2495|ferritin, heavy polypeptide 1	BC011359|FTH1|2495|ferritin, heavy polypeptide 1	BC070494|FTH1|2495|ferritin, heavy polypeptide 1	AB062402|FTH1|2495|ferritin, heavy polypeptide 1	BC013724|FTH1|2495|ferritin, heavy polypeptide 1	BC073750|FTH1|2495|ferritin, heavy polypeptide 1	BC000857|FTH1|2495|ferritin, heavy polypeptide 1	BC035441|FTH1|2495|ferritin, heavy polypeptide 1	AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	AK311818|FTH1|2495|ferritin, heavy polypeptide 1	BC016009|FTH1|2495|ferritin, heavy polypeptide 1	BC066341|FTH1|2495|ferritin, heavy polypeptide 1	BC066961|FTH1|2495|ferritin, heavy polypeptide 1	BC104643|FTH1|2495|ferritin, heavy polypeptide 1	BC105802|FTH1|2495|ferritin, heavy polypeptide 1	L20941|FTH1|2495|ferritin, heavy polypeptide 1	D28463|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr17_-_17480778_17480778	0.217696	SOX2.p2	AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr12_-_26277807_26278036	0.216884	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr3_+_4535030_4535033	0.216065	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v1_chr16_+_31724564_31724567	0.215776	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg19_v1_chr7_-_45151272_45151295	0.213214	SOX2.p2	BC017235|TBRG4|9238|transforming growth factor beta regulator 4	BC014918|TBRG4|9238|transforming growth factor beta regulator 4	AK022575|TBRG4|9238|transforming growth factor beta regulator 4	AK222943|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr5_-_150138554_150138656	0.212497	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg19_v1_chr2_+_136288953_136289168	0.212028	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg19_v1_chr22_+_39077960_39077974	0.211647	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr6_-_84140854_84140954	0.211173	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr12_+_57943843_57944051	0.210793	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr7_+_129007942_129008030	0.210566	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr8_+_61429543_61429550	0.210314	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr6_+_26251826_26251878	0.210205	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr3_+_47844627_47844685	0.210036	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr17_+_48638339_48638448	0.210029	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr22_-_18257160_18257189	0.209987	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg19_v1_chr16_+_1728256_1728281	0.208368	SOX2.p2	AK309909|HN1L|90861|hematological and neurological expressed 1-like	AK296998|HN1L|90861|hematological and neurological expressed 1-like	NM_144570|HN1L|90861|hematological and neurological expressed 1-like	AK023154|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr2_-_70475563_70475875	0.208203	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v1_chr1_+_215178884_215178884	0.208074	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr11_-_64545933_64545956	0.20796	SOX2.p2	BC038446|SF1|7536|splicing factor 1	NM_001178030|SF1|7536|splicing factor 1
hg19_v1_chr12_+_6603258_6603274	0.207695	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr11_+_64889699_64889801	0.207152	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr17_-_56591900_56591984	0.206752	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr14_-_67826414_67826719	0.205846	SOX2.p2	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg19_v1_chr6_-_84140758_84140825	0.204272	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr10_+_105727469_105727505	0.204221	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg19_v1_chr10_+_28822508_28822585	0.204042	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr9_-_35072545_35072569	0.203537	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg19_v1_chr6_-_13711952_13711996	0.203267	SOX2.p2	BC052781|RANBP9|10048|RAN binding protein 9
hg19_v1_chr10_-_104262404_104262511	0.202578	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr3_+_141457035_141457103	0.202253	SOX2.p2	NM_001201370|RNF7|9616|ring finger protein 7	NM_014245|RNF7|9616|ring finger protein 7	NM_183237|RNF7|9616|ring finger protein 7
hg19_v1_chr16_+_57769626_57769665	0.201922	SOX2.p2	NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr7_-_135433366_135433593	0.20189	SOX2.p2	BC137311|FAM180A|389558|family with sequence similarity 180, member A	BC137312|FAM180A|389558|family with sequence similarity 180, member A	AK297754|FAM180A|389558|family with sequence similarity 180, member A	AY358803|FAM180A|389558|family with sequence similarity 180, member A	AK290250|FAM180A|389558|family with sequence similarity 180, member A	AK310180|FAM180A|389558|family with sequence similarity 180, member A	NM_205855|FAM180A|389558|family with sequence similarity 180, member A
hg19_v1_chr2_+_29117503_29117573	0.201775	SOX2.p2	NM_015131|WDR43|23160|WD repeat domain 43	D26488|WDR43|23160|WD repeat domain 43
hg19_v1_chr12_-_10955168_10955225	0.200536	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg19_v1_chr18_-_33709204_33709379	0.199282	SOX2.p2	U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6
hg19_v1_chr11_-_46615497_46615573	0.199169	SOX2.p2	AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1	AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg19_v1_chr1_-_190446701_190446770	0.19878	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr6_-_47277511_47277639	0.198237	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr8_+_61429551_61429578	0.197874	SOX2.p2	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr12_+_6603291_6603297	0.197847	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr9_+_117349993_117350083	0.197079	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v1_chr6_-_127664448_127664503	0.195666	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr14_-_104028972_104029150	0.195564	SOX2.p2	AB020680|BAG5|9529|BCL2-associated athanogene 5	NM_001015048|BAG5|9529|BCL2-associated athanogene 5
hg19_v1_chr1_+_182808481_182808540	0.194572	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr5_-_43313492_43313571	0.19457	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr1_-_182361311_182361370	0.194555	SOX2.p2	AK122784|GLUL|2752|glutamate-ammonia ligase	NM_001033044|GLUL|2752|glutamate-ammonia ligase	NM_002065|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr16_+_2563993_2563999	0.192993	SOX2.p2	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr22_+_39077953_39077957	0.192968	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr18_+_32398225_32398411	0.192913	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr19_-_44124013_44124013	0.192853	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg19_v1_chr22_-_39052579_39052633	0.192615	SOX2.p2	NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr9_-_95087619_95087632	0.191208	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg19_v1_chr2_-_74007101_74007285	0.190887	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg19_v1_chr14_+_103800492_103800528	0.190574	SOX2.p2	NM_001969|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chrX_+_71401525_71401626	0.188585	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v1_chr1_-_156722023_156722239	0.187549	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg19_v1_chr12_+_53442732_53442789	0.18754	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr14_-_23564294_23564334	0.187166	SOX2.p2	AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1	AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1
hg19_v1_chr1_-_84464728_84464865	0.187154	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg19_v1_chr17_+_30677178_30677185	0.186916	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg19_v1_chr17_+_73720775_73720783	0.186532	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr6_+_125474800_125475079	0.1865	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg19_v1_chr16_+_67907018_67907035	0.186068	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr15_+_41625152_41625179	0.185685	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg19_v1_chr22_-_18256748_18256812	0.185571	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_001244572|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg19_v1_chr14_+_64971226_64971291	0.184197	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr12_-_25150372_25150452	0.18395	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg19_v1_chr14_-_25519076_25519401	0.183075	SOX2.p2	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)	NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)	BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)
hg19_v1_chr17_-_56160564_56160670	0.182291	SOX2.p2	
hg19_v1_chr5_+_140593508_140593537	0.182004	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg19_v1_chr15_+_82944821_82944960	0.181868	SOX2.p2	BC007811|AGSK1|80154|golgin subfamily A member 2-like	BC065260|AGSK1|80154|golgin subfamily A member 2-like	AK311124|AGSK1|80154|golgin subfamily A member 2-like	AK311170|AGSK1|80154|golgin subfamily A member 2-like	AK026448|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr14_+_67827030_67827036	0.181249	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chrX_+_48334400_48334694	0.180914	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg19_v1_chr12_-_46662709_46662777	0.180768	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr6_-_131949188_131949386	0.178473	SOX2.p2	AF135022|MED23|9439|mediator complex subunit 23	AM393572|MED23|9439|mediator complex subunit 23	EU832308|MED23|9439|mediator complex subunit 23	EU832392|MED23|9439|mediator complex subunit 23	EU392526|MED23|9439|mediator complex subunit 23	EU392528|MED23|9439|mediator complex subunit 23	EU392529|MED23|9439|mediator complex subunit 23	EU392530|MED23|9439|mediator complex subunit 23	EU392531|MED23|9439|mediator complex subunit 23	AK315030|MED23|9439|mediator complex subunit 23	AF105332|MED23|9439|mediator complex subunit 23	EU392520|MED23|9439|mediator complex subunit 23	EU392522|MED23|9439|mediator complex subunit 23	EU392527|MED23|9439|mediator complex subunit 23	EU392532|MED23|9439|mediator complex subunit 23	BC060759|MED23|9439|mediator complex subunit 23	AF104255|MED23|9439|mediator complex subunit 23	AL136776|MED23|9439|mediator complex subunit 23	AB033042|MED23|9439|mediator complex subunit 23	BC007088|MED23|9439|mediator complex subunit 23	NM_004830|MED23|9439|mediator complex subunit 23	NM_015979|MED23|9439|mediator complex subunit 23
hg19_v1_chr11_-_64545231_64545231	0.178292	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg19_v1_chr1_-_203155745_203155810	0.177915	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr13_+_34392205_34392250	0.177897	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr17_-_40169130_40169182	0.177043	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr6_-_29527477_29527510	0.176872	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg19_v1_chr10_-_73848263_73848274	0.17682	SOX2.p2	AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr14_-_21852424_21852424	0.174691	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr15_-_42840992_42841017	0.174552	SOX2.p2	AK094891|LRRC57|255252|leucine rich repeat containing 57	NM_153260|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chr12_-_58146110_58146116	0.173845	SOX2.p2	BC015669|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr3_-_18466759_18466836	0.173421	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg19_v1_chr16_+_2564000_2564104	0.1733	SOX2.p2	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr18_-_53255734_53255861	0.172769	SOX2.p2	FR748216|TCF4|6925|transcription factor 4	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_001243230|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg19_v1_chr11_-_117695408_117695460	0.172041	SOX2.p2	DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2	U50743|FXYD2|486|FXYD domain containing ion transport regulator 2	AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2	AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2	BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2	NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2
hg19_v1_chr17_-_16097882_16097955	0.171963	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg19_v1_chrX_+_110187468_110187626	0.170429	SOX2.p2	AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr14_-_21994342_21994483	0.169929	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr8_+_126010719_126010747	0.16974	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg19_v1_chr22_+_20105076_20105093	0.169024	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr11_+_57529233_57529445	0.168696	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chr6_+_12717036_12717051	0.167821	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr1_+_36387788_36387930	0.167662	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr17_+_61678277_61678442	0.167486	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr8_+_29952921_29952965	0.167293	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr11_-_116658701_116658729	0.166866	SOX2.p2	AK301227|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg19_v1_chr19_+_10791025_10791071	0.166678	SOX2.p2	
hg19_v1_chr3_+_48956244_48956268	0.166052	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr1_-_185125819_185126116	0.165439	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg19_v1_chr1_+_242012032_242012139	0.165354	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr19_+_41770273_41770281	0.162885	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chrX_+_24712063_24712067	0.16117	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v1_chr6_-_33771756_33771792	0.160804	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg19_v1_chr16_+_1728283_1728289	0.160626	SOX2.p2	BC060853|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr1_+_154193757_154193813	0.158008	SOX2.p2	AK124294|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr8_+_1449531_1449568	0.157263	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg19_v1_chr21_-_36231794_36231878	0.156774	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr17_-_5026396_5026412	0.156654	SOX2.p2	NM_014519|ZNF232|7775|zinc finger protein 232	AK316369|ZNF232|7775|zinc finger protein 232
hg19_v1_chr1_-_26232643_26232643	0.154294	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr1_-_68915631_68915641	0.15412	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg19_v1_chr16_-_29937523_29937530	0.154111	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr9_+_132597728_132597802	0.152404	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr19_-_48673559_48673604	0.152225	SOX2.p2	M36067|LIG1|3978|ligase I, DNA, ATP-dependent	NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent	AK314210|LIG1|3978|ligase I, DNA, ATP-dependent	AK297296|LIG1|3978|ligase I, DNA, ATP-dependent	AK303644|LIG1|3978|ligase I, DNA, ATP-dependent	AB208791|LIG1|3978|ligase I, DNA, ATP-dependent	AK225863|LIG1|3978|ligase I, DNA, ATP-dependent	AK300370|LIG1|3978|ligase I, DNA, ATP-dependent
hg19_v1_chr10_+_225932_225961	0.152	SOX2.p2	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11	X86098|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11	AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr6_+_34204663_34204679	0.151693	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr4_-_71705188_71705219	0.15148	SOX2.p2	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1	NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1
hg19_v1_chr19_+_16178170_16178350	0.150941	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr22_-_18257194_18257220	0.1506	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg19_v1_chr10_+_104179570_104179588	0.15046	SOX2.p2	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15	BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15
hg19_v1_chr18_-_54305657_54305837	0.149656	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr1_+_220267418_220267487	0.149533	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr14_-_105262078_105262085	0.148497	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr12_+_19282402_19282729	0.147846	SOX2.p2	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5
hg19_v1_chr14_-_24777064_24777149	0.146411	SOX2.p2	
hg19_v1_chr16_-_75529289_75529306	0.145954	SOX2.p2	
hg19_v1_chr12_-_57119310_57119327	0.145662	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg19_v1_chr14_+_39583426_39583509	0.145116	SOX2.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr10_+_93558182_93558197	0.144386	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr6_+_25279765_25280023	0.144244	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr9_+_35538628_35538628	0.143911	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr9_+_129677046_129677162	0.143746	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg19_v1_chr5_+_65017993_65018200	0.14325	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg19_v1_chr16_-_46782104_46782220	0.143204	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg19_v1_chr20_-_34330177_34330177	0.142963	SOX2.p2	BX537770|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr19_-_53238290_53238306	0.14262	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg19_v1_chr12_+_69633352_69633426	0.142	SOX2.p2	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chrX_+_149613719_149613846	0.14172	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chr5_-_146889618_146889635	0.141666	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr4_+_72204769_72204965	0.141306	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr5_+_34656367_34656459	0.140838	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr12_+_70636773_70636809	0.140647	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	NM_001199302|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg19_v1_chr6_+_43597278_43597278	0.14062	SOX2.p2	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein
hg19_v1_chr2_+_220492286_220492423	0.139874	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr3_-_127541160_127541700	0.139675	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg19_v1_chr5_+_53751430_53751619	0.13804	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	HQ258075|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg19_v1_chr2_-_37898768_37898790	0.137981	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr2_+_219081864_219081874	0.137068	SOX2.p2	NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr2_+_162272619_162272744	0.136318	SOX2.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg19_v1_chr6_-_47277646_47277744	0.135777	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr17_-_61819120_61819163	0.134672	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr5_-_147162175_147162231	0.134461	SOX2.p2	BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr9_-_139334267_139334273	0.134313	SOX2.p2	AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr6_+_71136141_71136173	0.133999	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr4_+_113558119_113558119	0.13375	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chrX_+_70503534_70503553	0.133318	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr17_+_30677187_30677304	0.132872	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg19_v1_chr7_+_150690838_150690891	0.132466	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr19_+_40854529_40854652	0.13187	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr1_-_200992824_200992839	0.129972	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_001252100|KIF21B|23046|kinesin family member 21B	NM_001252102|KIF21B|23046|kinesin family member 21B	NM_001252103|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg19_v1_chr1_-_108742738_108742802	0.129852	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr6_+_32939371_32939371	0.129717	SOX2.p2	NM_001199455|BRD2|6046|bromodomain containing 2
hg19_v1_chr11_-_27723061_27723179	0.129665	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr16_+_71496180_71496197	0.129477	SOX2.p2	
hg19_v1_chr6_+_148664124_148664259	0.128787	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr19_-_39523132_39523334	0.128468	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27
hg19_v1_chr15_-_34502188_34502262	0.12797	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29
hg19_v1_chr3_+_155588447_155588463	0.127647	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr12_-_6961044_6961229	0.125418	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr12_+_69080722_69080805	0.125115	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr12_-_57472547_57472551	0.124676	SOX2.p2	AL833310|TMEM194A|23306|transmembrane protein 194A	AL833311|TMEM194A|23306|transmembrane protein 194A
hg19_v1_chr11_+_64949413_64949466	0.124367	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg19_v1_chr8_-_33457435_33457484	0.123042	SOX2.p2	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr19_-_47735858_47736022	0.12289	SOX2.p2	AK298837|BBC3|27113|BCL2 binding component 3	AF354654|BBC3|27113|BCL2 binding component 3	AF354655|BBC3|27113|BCL2 binding component 3	AF354656|BBC3|27113|BCL2 binding component 3	NM_001127240|BBC3|27113|BCL2 binding component 3	NM_001127241|BBC3|27113|BCL2 binding component 3	NM_001127242|BBC3|27113|BCL2 binding component 3
hg19_v1_chr11_-_118972784_118972851	0.122699	SOX2.p2	NM_001382|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK095718|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
hg19_v1_chr2_+_190649109_190649291	0.122355	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr22_+_18632841_18632964	0.122191	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr11_-_116658738_116658738	0.121915	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr6_-_89927495_89927495	0.121827	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr6_-_79787887_79787890	0.121371	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr1_+_28844647_28844759	0.121306	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr20_+_1099216_1099490	0.120888	SOX2.p2	NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v1_chr1_-_27226928_27226935	0.11993	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr16_+_57496574_57496636	0.119315	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr3_+_155588479_155588659	0.119051	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr9_+_132597651_132597717	0.117019	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr16_+_2563675_2563893	0.116528	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr17_-_79829237_79829260	0.115842	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr22_-_38713384_38713444	0.114652	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr8_+_18027970_18027970	0.114572	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg19_v1_chrX_-_119603155_119603233	0.114488	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr17_+_7960201_7960203	0.113648	SOX2.p2	
hg19_v1_chr9_-_134955056_134955242	0.112548	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr16_+_57496548_57496568	0.112369	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr18_+_60383895_60383958	0.112331	SOX2.p2	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1
hg19_v1_chr10_-_123734708_123734812	0.111291	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg19_v1_chr3_+_150264514_150264575	0.109624	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr3_+_157827849_157827933	0.109478	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr2_+_113735595_113735608	0.108918	SOX2.p2	AY359111|IL36G|56300|interleukin 36, gamma	AF200492|IL36G|56300|interleukin 36, gamma	NM_019618|IL36G|56300|interleukin 36, gamma	AF206696|IL36G|56300|interleukin 36, gamma
hg19_v1_chr6_-_47277354_47277423	0.10874	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_+_225997804_225997851	0.108681	SOX2.p2	U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr11_-_102401430_102401489	0.1082	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v1_chrX_+_22050920_22051130	0.107809	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg19_v1_chr11_+_64889802_64889814	0.106538	SOX2.p2	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr9_+_125703111_125703346	0.105671	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg19_v1_chr8_+_126010748_126010804	0.105656	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg19_v1_chr14_-_80697396_80697396	0.104978	SOX2.p2	AK292210|DIO2|1734|deiodinase, iodothyronine, type II	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II
hg19_v1_chr17_+_46125724_46125724	0.104927	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr3_+_133502876_133502876	0.104608	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg19_v1_chr1_+_150266261_150266340	0.104246	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg19_v1_chr4_+_76649826_76650003	0.104165	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr16_-_29937539_29937570	0.10415	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr2_-_207024103_207024242	0.103434	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v1_chr15_-_90455918_90456292	0.10282	SOX2.p2	AK093274|C15orf38|348110|chromosome 15 open reading frame 38	AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	BC053602|C15orf38|348110|chromosome 15 open reading frame 38	NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	NM_182616|C15orf38|348110|chromosome 15 open reading frame 38
hg19_v1_chr16_+_4845265_4845378	0.102784	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chr15_-_42840910_42840991	0.102722	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chrX_-_16888442_16888460	0.102463	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr11_-_27742224_27742325	0.101898	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr5_+_170847059_170847203	0.10184	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr1_+_200860619_200860674	0.100441	SOX2.p2	NM_018265|C1orf106|55765|chromosome 1 open reading frame 106	AK001583|C1orf106|55765|chromosome 1 open reading frame 106	AK001763|C1orf106|55765|chromosome 1 open reading frame 106	BC106877|C1orf106|55765|chromosome 1 open reading frame 106
hg19_v1_chr5_+_140792507_140792742	0.0999481	SOX2.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chrX_+_70521627_70521654	0.0999214	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg19_v1_chr7_-_14029641_14029641	0.0994524	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr6_+_52285804_52285804	0.0991853	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg19_v1_chr14_-_27066959_27067018	0.0981637	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr18_-_29264394_29264685	0.0979563	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr8_+_23101149_23101168	0.0972335	SOX2.p2	AK097202|CHMP7|91782|charged multivesicular body protein 7	NM_152272|CHMP7|91782|charged multivesicular body protein 7	BC042050|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr16_+_69458489_69458543	0.0969145	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr2_+_241375030_241375131	0.0966911	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg19_v1_chr11_-_61735108_61735187	0.0960572	SOX2.p2	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr5_+_34656595_34656599	0.0953821	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chr12_-_50419160_50419306	0.0947375	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg19_v1_chr10_-_123734641_123734702	0.0936862	SOX2.p2	
hg19_v1_chr12_+_112280278_112280363	0.0934914	SOX2.p2	NM_003668|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	NM_139078|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	BC047284|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5
hg19_v1_chr19_-_41903226_41903372	0.0929653	SOX2.p2	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg19_v1_chr10_+_12391708_12391726	0.0926909	SOX2.p2	BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg19_v1_chr2_+_190648810_190648810	0.0923046	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr9_+_135906373_135906403	0.0918008	SOX2.p2	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v1_chr4_-_39528921_39529094	0.0912874	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg19_v1_chr3_+_52719935_52720108	0.0911864	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg19_v1_chr1_-_33502452_33502463	0.0906785	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2
hg19_v1_chr6_-_127664691_127664753	0.0901962	SOX2.p2	AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1	BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1	AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr3_-_48956817_48956817	0.0894473	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg19_v1_chr7_-_150924220_150924330	0.0891805	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr5_+_134209909_134210195	0.0889159	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg19_v1_chr1_-_85741992_85742279	0.0886269	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr19_-_12992249_12992334	0.086866	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg19_v1_chr7_+_148036528_148036603	0.0867949	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2
hg19_v1_chr17_+_42786188_42786287	0.0859778	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr8_-_124749573_124749665	0.0857376	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr17_-_7518124_7518489	0.0855901	SOX2.p2	BC067272|FXR2|9513|fragile X mental retardation, autosomal homolog 2	BC020090|FXR2|9513|fragile X mental retardation, autosomal homolog 2	NM_004860|FXR2|9513|fragile X mental retardation, autosomal homolog 2
hg19_v1_chr1_+_225997742_225997802	0.0855233	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr8_-_87520849_87520978	0.0852247	SOX2.p2	BX640636|FAM82B|51115|family with sequence similarity 82, member B	AK303122|FAM82B|51115|family with sequence similarity 82, member B	BC009671|FAM82B|51115|family with sequence similarity 82, member B	AK297896|FAM82B|51115|family with sequence similarity 82, member B	AF151848|FAM82B|51115|family with sequence similarity 82, member B	AK000672|FAM82B|51115|family with sequence similarity 82, member B
hg19_v1_chr3_+_58223415_58223646	0.0844581	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr2_-_128615706_128615745	0.0844344	SOX2.p2	BC093795|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	NM_004805|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC093797|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr2_-_128439359_128439359	0.0837189	SOX2.p2	NM_001161404|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr3_+_138067678_138067758	0.0836846	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr9_-_98269480_98269480	0.0835737	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg19_v1_chr11_+_65339819_65340044	0.0827667	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B
hg19_v1_chr5_+_140800536_140800602	0.0827103	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr19_+_41770976_41770985	0.0826277	SOX2.p2	AK290729|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr18_+_32820987_32821106	0.0807626	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397
hg19_v1_chr16_+_1728290_1728323	0.0792604	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr9_-_139760709_139760768	0.0787831	SOX2.p2	BT009863|EDF1|8721|endothelial differentiation-related factor 1	CR541914|EDF1|8721|endothelial differentiation-related factor 1	DQ891577|EDF1|8721|endothelial differentiation-related factor 1	DQ894770|EDF1|8721|endothelial differentiation-related factor 1	AB002282|EDF1|8721|endothelial differentiation-related factor 1	AB002283|EDF1|8721|endothelial differentiation-related factor 1	BC015500|EDF1|8721|endothelial differentiation-related factor 1	NM_003792|EDF1|8721|endothelial differentiation-related factor 1	NM_153200|EDF1|8721|endothelial differentiation-related factor 1
hg19_v1_chr2_+_71295685_71295813	0.0781304	SOX2.p2	BC001029|NAGK|55577|N-acetylglucosamine kinase	BC005371|NAGK|55577|N-acetylglucosamine kinase	AK001812|NAGK|55577|N-acetylglucosamine kinase	AK097223|NAGK|55577|N-acetylglucosamine kinase	AK222645|NAGK|55577|N-acetylglucosamine kinase	BC036843|NAGK|55577|N-acetylglucosamine kinase	AJ242910|NAGK|55577|N-acetylglucosamine kinase	DQ892674|NAGK|55577|N-acetylglucosamine kinase	DQ895916|NAGK|55577|N-acetylglucosamine kinase	CR457271|NAGK|55577|N-acetylglucosamine kinase
hg19_v1_chr19_+_52873169_52873213	0.0776856	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg19_v1_chr10_+_104005307_104005427	0.0774337	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg19_v1_chr19_+_20011700_20011869	0.0760665	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chr5_-_22853435_22853458	0.0757208	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr17_-_56429495_56429577	0.0756698	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg19_v1_chr2_-_170681352_170681419	0.0754825	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg19_v1_chr1_+_63833324_63833337	0.0749637	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg19_v1_chr8_+_68864341_68864363	0.0748939	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr7_+_139025104_139025240	0.0746386	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg19_v1_chr1_-_161102457_161102477	0.074548	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg19_v1_chr4_+_2471179_2471182	0.0738511	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg19_v1_chr4_+_142142073_142142100	0.0738477	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg19_v1_chr17_+_26794838_26794968	0.0725581	SOX2.p2	
hg19_v1_chr1_-_78444772_78444778	0.0718746	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr14_+_67827077_67827084	0.0716504	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr8_-_23261626_23261631	0.0716277	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr8_+_29952971_29953028	0.0715366	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr1_-_117210301_117210466	0.071184	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr19_-_2015628_2015713	0.0701495	SOX2.p2	AF355797|BTBD2|55643|BTB (POZ) domain containing 2	NM_017797|BTBD2|55643|BTB (POZ) domain containing 2	AK225831|BTBD2|55643|BTB (POZ) domain containing 2
hg19_v1_chr14_-_31926597_31926753	0.0699374	SOX2.p2	BC010618|C14orf126|112487|chromosome 14 open reading frame 126	AK055367|C14orf126|112487|chromosome 14 open reading frame 126	NM_080664|C14orf126|112487|chromosome 14 open reading frame 126
hg19_v1_chr1_-_167523016_167523110	0.0687401	SOX2.p2	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr6_-_123957941_123958237	0.0686442	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr17_-_79980685_79980777	0.0679032	SOX2.p2	BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)
hg19_v1_chr10_-_97321094_97321184	0.0676807	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg19_v1_chr14_-_35344080_35344137	0.0674732	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr7_+_37723378_37723386	0.0672036	SOX2.p2	
hg19_v1_chr18_-_77711652_77711653	0.0672022	SOX2.p2	AK301881|PQLC1|80148|PQ loop repeat containing 1	NM_001146343|PQLC1|80148|PQ loop repeat containing 1	NM_001146345|PQLC1|80148|PQ loop repeat containing 1	NM_025078|PQLC1|80148|PQ loop repeat containing 1
hg19_v1_chr17_-_655375_655465	0.0671768	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr1_-_1677430_1677493	0.0668835	SOX2.p2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_001199787|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr2_+_219283809_219283872	0.066625	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg19_v1_chr4_-_103266577_103266692	0.065926	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr1_-_167522979_167523003	0.065741	SOX2.p2	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr1_+_118472364_118472393	0.0650457	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg19_v1_chr9_-_128003615_128003632	0.0650127	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr9_-_21305311_21305311	0.0649156	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr4_-_110624550_110624632	0.0648569	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg19_v1_chr7_+_148892553_148892826	0.0648118	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg19_v1_chr5_+_108084638_108084706	0.064562	SOX2.p2	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase	BC058030|FER|2241|fer (fps/fes related) tyrosine kinase
hg19_v1_chr5_+_42565963_42565965	0.0644268	SOX2.p2	BC136496|GHR|2690|growth hormone receptor	NM_001242460|GHR|2690|growth hormone receptor	NM_001242461|GHR|2690|growth hormone receptor	NM_001242462|GHR|2690|growth hormone receptor
hg19_v1_chr14_+_105780903_105781178	0.0635556	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg19_v1_chr16_+_69458562_69458566	0.0635008	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr15_+_82944772_82944812	0.0632346	SOX2.p2	AK309746|AGSK1|80154|golgin subfamily A member 2-like	AK310769|AGSK1|80154|golgin subfamily A member 2-like	BC072390|AGSK1|80154|golgin subfamily A member 2-like	AK291684|AGSK1|80154|golgin subfamily A member 2-like	AK309420|AGSK1|80154|golgin subfamily A member 2-like	AK309732|AGSK1|80154|golgin subfamily A member 2-like	AK307285|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr22_+_29664216_29664339	0.0631679	SOX2.p2	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg19_v1_chr1_-_33502464_33502469	0.0628856	SOX2.p2	AB005621|AK2|204|adenylate kinase 2
hg19_v1_chr16_-_29937354_29937518	0.062601	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr7_-_93633527_93633702	0.0622064	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg19_v1_chr13_-_36920603_36920645	0.060924	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr3_-_69037498_69037515	0.0608653	SOX2.p2	AK123213|C3orf64|285203|chromosome 3 open reading frame 64
hg19_v1_chr6_-_42713837_42713914	0.0607078	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr4_+_1723233_1723303	0.0599582	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr13_-_36920777_36920939	0.0599007	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr13_-_33780142_33780186	0.0597634	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr17_-_655468_655503	0.0596209	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr1_-_23885916_23886053	0.0595723	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr15_-_26961911_26961911	0.0593559	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v1_chrX_+_96138906_96139035	0.0582278	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg19_v1_chr12_+_98909410_98909413	0.0574051	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr14_+_67827087_67827147	0.0568214	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr15_-_60771118_60771430	0.0565325	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg19_v1_chr19_+_10765106_10765230	0.056157	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr4_-_141677470_141677529	0.0561354	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg19_v1_chr10_+_93558068_93558138	0.0555007	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr20_-_45035253_45035346	0.0543845	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg19_v1_chr3_-_149095517_149095567	0.0538618	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr19_-_12780206_12780249	0.0537217	SOX2.p2	BC001192|WDR83OS|51398|WD repeat domain 83 opposite strand	AK311944|WDR83OS|51398|WD repeat domain 83 opposite strand	AF059620|WDR83OS|51398|WD repeat domain 83 opposite strand	BC042919|WDR83OS|51398|WD repeat domain 83 opposite strand	BC061912|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr15_-_91565685_91565855	0.0524176	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg19_v1_chrX_+_48368063_48368208	0.0518526	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr4_-_140060601_140060605	0.0516952	SOX2.p2	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)
hg19_v1_chr1_-_145610869_145610904	0.0515482	SOX2.p2	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr3_-_49066760_49066785	0.051051	SOX2.p2	DQ893403|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	DQ896721|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr9_+_97521930_97522065	0.0497967	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr9_-_139334250_139334266	0.0486706	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr7_-_2595327_2595404	0.0485361	SOX2.p2	AK131083|BRAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BRAT1|221927|BRCA1-associated ATM activator 1
hg19_v1_chr10_+_93558139_93558165	0.0481105	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr5_+_131993864_131993917	0.0479142	SOX2.p2	BC096138|IL13|3596|interleukin 13	BC096139|IL13|3596|interleukin 13	BC096140|IL13|3596|interleukin 13	BC096141|IL13|3596|interleukin 13	NM_002188|IL13|3596|interleukin 13	X69079|IL13|3596|interleukin 13	L06801|IL13|3596|interleukin 13	AF043334|IL13|3596|interleukin 13
hg19_v1_chr19_-_3979828_3980135	0.0477665	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg19_v1_chr17_+_7487153_7487180	0.0467484	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr8_-_23261591_23261612	0.0467448	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr14_+_74035865_74036130	0.0463765	SOX2.p2	DQ893488|ACOT2|10965|acyl-CoA thioesterase 2	DQ896406|ACOT2|10965|acyl-CoA thioesterase 2	BC004436|ACOT2|10965|acyl-CoA thioesterase 2	BC006500|ACOT2|10965|acyl-CoA thioesterase 2	L40401|ACOT2|10965|acyl-CoA thioesterase 2	AY005822|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr17_+_73452663_73452813	0.0463149	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg19_v1_chr4_+_5053464_5053590	0.0462841	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr7_-_44887620_44887654	0.0456578	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg19_v1_chr2_-_39348127_39348191	0.0453072	SOX2.p2	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg19_v1_chr12_+_98909405_98909409	0.045051	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr3_-_123339423_123339529	0.0443144	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr8_+_146024234_146024411	0.0441302	SOX2.p2	AK131440|ZNF517|340385|zinc finger protein 517	NM_213605|ZNF517|340385|zinc finger protein 517	AK096527|ZNF517|340385|zinc finger protein 517	AK097278|ZNF517|340385|zinc finger protein 517
hg19_v1_chr5_-_77844975_77845071	0.0437874	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr17_+_39411635_39411635	0.0436991	SOX2.p2	NM_030975|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr11_-_6633178_6633238	0.0433418	SOX2.p2	AL833496|TAF10|6881|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v1_chr10_+_71812536_71812658	0.0428124	SOX2.p2	BC016172|H2AFY2|55506|H2A histone family, member Y2	AK022776|H2AFY2|55506|H2A histone family, member Y2	AK131057|H2AFY2|55506|H2A histone family, member Y2	AF151534|H2AFY2|55506|H2A histone family, member Y2	AF336304|H2AFY2|55506|H2A histone family, member Y2	AK022475|H2AFY2|55506|H2A histone family, member Y2
hg19_v1_chr7_-_83270746_83270746	0.0427338	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr5_+_68666531_68666531	0.0425496	SOX2.p2	AF076838|RAD17|5884|RAD17 homolog (S. pombe)	NM_002873|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr5_+_137688270_137688291	0.0424544	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chrX_-_128657381_128657436	0.042347	SOX2.p2	BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v1_chr17_+_46125675_46125723	0.0423322	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr15_+_80352488_80352513	0.0422698	SOX2.p2	NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr6_+_25279651_25279666	0.0420682	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr10_-_43892160_43892278	0.0420149	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg19_v1_chr1_-_157015161_157015161	0.0418283	SOX2.p2	BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11	NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11	NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v1_chr5_-_27038650_27038692	0.0415641	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg19_v1_chr15_-_65477645_65477727	0.0413197	SOX2.p2	AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr9_-_35072596_35072636	0.0413154	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg19_v1_chr11_+_94800055_94800281	0.0410571	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr6_-_28304151_28304151	0.0409107	SOX2.p2	NM_001243241|ZNF323|64288|zinc finger protein 323	NM_001243242|ZNF323|64288|zinc finger protein 323	NM_001243244|ZNF323|64288|zinc finger protein 323	NM_030899|ZNF323|64288|zinc finger protein 323
hg19_v1_chr1_+_20208837_20208891	0.040166	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr17_+_46125725_46125780	0.0394552	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr19_+_57791281_57791431	0.0392221	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg19_v1_chr4_-_144826659_144826715	0.0386813	SOX2.p2	EU176664|GYPE|2996|glycophorin E (MNS blood group)	BC064396|GYPE|2996|glycophorin E (MNS blood group)	BC017864|GYPE|2996|glycophorin E (MNS blood group)	M29610|GYPE|2996|glycophorin E (MNS blood group)	NM_002102|GYPE|2996|glycophorin E (MNS blood group)	NM_198682|GYPE|2996|glycophorin E (MNS blood group)
hg19_v1_chr3_-_119379269_119379436	0.0386695	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg19_v1_chr22_+_44422183_44422183	0.0374162	SOX2.p2	AK308443|PARVB|29780|parvin, beta	NM_001243386|PARVB|29780|parvin, beta
hg19_v1_chr8_+_66933790_66933848	0.0370696	SOX2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v1_chr1_-_151431648_151431704	0.0365714	SOX2.p2	BX649163|POGZ|23126|pogo transposable element with ZNF domain	AB037911|POGZ|23126|pogo transposable element with ZNF domain	AB075477|POGZ|23126|pogo transposable element with ZNF domain	AK000199|POGZ|23126|pogo transposable element with ZNF domain	AK300307|POGZ|23126|pogo transposable element with ZNF domain	BC057773|POGZ|23126|pogo transposable element with ZNF domain	BX537561|POGZ|23126|pogo transposable element with ZNF domain	AK299791|POGZ|23126|pogo transposable element with ZNF domain	AK302501|POGZ|23126|pogo transposable element with ZNF domain
hg19_v1_chr19_+_9473695_9473695	0.0360935	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chr1_+_159409511_159409548	0.0360427	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg19_v1_chr10_-_64578926_64578926	0.0355798	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg19_v1_chr13_-_26795821_26795893	0.0349176	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr3_+_39448179_39448241	0.0348155	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA
hg19_v1_chr15_+_69606741_69606741	0.0344682	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr13_-_60587298_60587342	0.0342353	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg19_v1_chr17_+_27370155_27370243	0.0341317	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr5_-_40835325_40835386	0.0326342	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg19_v1_chr6_-_84140744_84140753	0.0324403	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr16_-_75467249_75467402	0.0323466	SOX2.p2	BT009819|CFDP1|10428|craniofacial development protein 1	CR542111|CFDP1|10428|craniofacial development protein 1	DQ890998|CFDP1|10428|craniofacial development protein 1	EU176574|CFDP1|10428|craniofacial development protein 1	AK313948|CFDP1|10428|craniofacial development protein 1	AB009285|CFDP1|10428|craniofacial development protein 1	D85939|CFDP1|10428|craniofacial development protein 1	BC000991|CFDP1|10428|craniofacial development protein 1	NM_006324|CFDP1|10428|craniofacial development protein 1	AK226031|CFDP1|10428|craniofacial development protein 1
hg19_v1_chr4_+_142142044_142142066	0.0312659	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg19_v1_chr16_-_8962842_8962878	0.0309478	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg19_v1_chr8_+_133787611_133787673	0.0306825	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr3_+_196466806_196466845	0.0305544	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v1_chr2_+_170590241_170590430	0.0299972	SOX2.p2	NM_144711|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr7_-_139477437_139478374	0.0289665	SOX2.p2	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg19_v1_chr9_-_128003634_128003794	0.02827	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr11_-_107729913_107729913	0.0281716	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr1_+_28261503_28261620	0.0271826	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v1_chr6_+_126070813_126070872	0.0261683	SOX2.p2	AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr5_-_40835283_40835323	0.0256162	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg19_v1_chr1_-_155214315_155214652	0.0254336	SOX2.p2	BC062626|GBAP1|2630|glucosidase, beta, acid pseudogene 1	AK311242|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg19_v1_chr3_+_185303961_185304206	0.0247879	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v1_chr11_+_43665772_43665796	0.0247103	SOX2.p2	
hg19_v1_chr3_-_155421996_155421996	0.0240072	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr10_+_127408083_127408144	0.023889	SOX2.p2	BC026172|C10orf137|26098|chromosome 10 open reading frame 137	NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137	NM_015608|C10orf137|26098|chromosome 10 open reading frame 137	BC028715|C10orf137|26098|chromosome 10 open reading frame 137	BC105929|C10orf137|26098|chromosome 10 open reading frame 137	BC107479|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr2_+_70314903_70314932	0.0235583	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr3_-_49066813_49066847	0.0234552	SOX2.p2	BC009236|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC015567|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC012840|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	J04208|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC006124|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	AK293397|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr2_+_207024614_207024703	0.0233733	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr7_-_80548322_80548546	0.0232758	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v1_chr1_-_161102210_161102312	0.0227755	SOX2.p2	NM_001039712|DEDD|9191|death effector domain containing
hg19_v1_chr6_+_33168602_33168725	0.0225875	SOX2.p2	NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7
hg19_v1_chr3_-_57583153_57583228	0.0223199	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr16_+_4902076_4902215	0.0221968	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr6_-_134498973_134499012	0.0221488	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chr16_+_67876381_67876584	0.0217359	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg19_v1_chr6_-_105627857_105627857	0.021692	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr9_-_125590809_125590934	0.0214742	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr12_-_7079616_7079827	0.0213828	SOX2.p2	DQ891808|PHB2|11331|prohibitin 2	EU176626|PHB2|11331|prohibitin 2	BC014766|PHB2|11331|prohibitin 2	BC013228|PHB2|11331|prohibitin 2	AF178980|PHB2|11331|prohibitin 2	AF150962|PHB2|11331|prohibitin 2
hg19_v1_chr1_-_27226937_27226965	0.0209952	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr11_+_66278076_66278157	0.0204381	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg19_v1_chr3_-_49066858_49066883	0.0201731	SOX2.p2	NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr9_-_132586363_132586397	0.0197351	SOX2.p2	BT006931|TOR1A|1861|torsin family 1, member A (torsin A)	DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)	DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)	BC014484|TOR1A|1861|torsin family 1, member A (torsin A)	AK314505|TOR1A|1861|torsin family 1, member A (torsin A)	AK075343|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr19_+_1104068_1104117	0.0193371	SOX2.p2	BC010157|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)
hg19_v1_chr14_-_35344852_35344852	0.0192677	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr16_-_4562979_4563123	0.0191956	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr12_+_72079873_72079886	0.0187742	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg19_v1_chr10_-_128077011_128077051	0.0180778	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr17_-_8079607_8079713	0.0174804	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr3_+_23986735_23986895	0.0171331	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg19_v1_chr4_-_103265818_103265919	0.0170758	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr12_-_7079828_7079923	0.0164518	SOX2.p2	AK298217|PHB2|11331|prohibitin 2	AK301316|PHB2|11331|prohibitin 2	AF126021|PHB2|11331|prohibitin 2	NM_007273|PHB2|11331|prohibitin 2	BC110322|PHB2|11331|prohibitin 2	NM_001144831|PHB2|11331|prohibitin 2
hg19_v1_chr6_-_42713822_42713835	0.0160223	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr2_+_24150144_24150170	0.0154392	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg19_v1_chr14_-_20922969_20923022	0.0148535	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr2_-_178128527_178128616	0.0146974	SOX2.p2	AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg19_v1_chr7_-_44887567_44887589	0.0146579	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg19_v1_chr1_-_78444690_78444763	0.0141056	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr1_+_117602944_117602964	0.0121992	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg19_v1_chr19_-_44123732_44123767	0.0114964	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg19_v1_chr1_+_28844762_28844803	0.0105387	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr17_-_61819165_61819329	0.0104642	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr11_-_18610182_18610321	0.0103741	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg19_v1_chr1_+_151138497_151138628	0.00942993	SOX2.p2	NM_001204856|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	AK301644|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1
hg19_v1_chr14_-_20923266_20923266	0.00937677	SOX2.p2	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr1_+_20208908_20208920	0.00926201	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr8_-_101315457_101315486	0.00848225	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr9_-_98269686_98269714	0.0084144	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg19_v1_chr10_+_92980322_92980494	0.0082782	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg19_v1_chr9_+_90112419_90112753	0.00757899	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr4_-_41216455_41216683	0.0075458	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr11_+_17757494_17757545	0.00726015	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg19_v1_chr4_-_149363498_149363671	0.00721295	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg19_v1_chr2_+_207024330_207024468	0.00696379	SOX2.p2	S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr19_-_55767103_55767150	0.00588444	SOX2.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr14_-_20922841_20922962	0.00522578	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr6_-_135375954_135376035	0.00516583	SOX2.p2	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)	AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)	AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)	U87791|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)
hg19_v1_chr6_-_42110714_42110714	0.00508071	SOX2.p2	NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132
hg19_v1_chr3_+_48956272_48956295	0.00490823	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr7_+_47694841_47694841	0.00486227	SOX2.p2	AK126096|C7orf65|401335|chromosome 7 open reading frame 65	NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65
hg19_v1_chr17_+_75369236_75369271	0.00481505	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg19_v1_chr8_-_145050896_145050958	0.00469538	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg19_v1_chr11_+_69455978_69456081	0.00463353	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg19_v1_chr15_-_65477441_65477562	0.00454248	SOX2.p2	BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr9_-_128003348_128003613	0.00402997	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr20_+_62328002_62328021	0.00282018	SOX2.p2	NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v1_chr8_-_33370552_33370702	0.00269969	SOX2.p2	AK026916|TTI2|80185|TELO2 interacting protein 2	BX648410|TTI2|80185|TELO2 interacting protein 2	BC007387|TTI2|80185|TELO2 interacting protein 2	BC066935|TTI2|80185|TELO2 interacting protein 2	NM_025115|TTI2|80185|TELO2 interacting protein 2	NM_001102401|TTI2|80185|TELO2 interacting protein 2
hg19_v1_chr16_-_87799495_87799536	0.00218585	SOX2.p2	BC001044|KLHDC4|54758|kelch domain containing 4
hg19_v1_chr17_+_75316373_75316408	0.00117738	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg19_v1_chr15_+_45879416_45879556	0.000442154	SOX2.p2	AF080470|PLDN|26258|pallidin homolog (mouse)	NM_012388|PLDN|26258|pallidin homolog (mouse)
