averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
POU6F1 | hg19_v2_chr12_-_51611477_51611612 | -0.43 | 2.4e-11 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_+_98612446 Show fit | 14.14 |
ENST00000496368.1
ENST00000421861.2 ENST00000357602.3 |
importin 5 |
|
chrX_-_122756660 Show fit | 10.90 |
ENST00000441692.1
|
THO complex 2 |
|
chr2_+_242289502 Show fit | 8.73 |
ENST00000451310.1
|
septin 2 |
|
chr1_-_197115818 Show fit | 8.49 |
ENST00000367409.4
ENST00000294732.7 |
asp (abnormal spindle) homolog, microcephaly associated (Drosophila) |
|
chr15_-_85259294 Show fit | 8.47 |
ENST00000558217.1
ENST00000558196.1 ENST00000558134.1 |
SEC11 homolog A (S. cerevisiae) |
|
chr15_-_85259330 Show fit | 7.76 |
ENST00000560266.1
|
SEC11 homolog A (S. cerevisiae) |
|
chr15_-_85259384 Show fit | 7.70 |
ENST00000455959.3
|
SEC11 homolog A (S. cerevisiae) |
|
chr6_-_74231444 Show fit | 7.62 |
ENST00000331523.2
ENST00000356303.2 |
eukaryotic translation elongation factor 1 alpha 1 |
|
chrX_+_119737806 Show fit | 7.53 |
ENST00000371317.5
|
malignant T cell amplified sequence 1 |
|
chr5_+_115177178 Show fit | 7.47 |
ENST00000316788.7
|
adaptor-related protein complex 3, sigma 1 subunit |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 30.1 | GO:0006465 | signal peptide processing(GO:0006465) |
0.9 | 14.1 | GO:0006610 | ribosomal protein import into nucleus(GO:0006610) |
0.5 | 13.3 | GO:0072662 | protein targeting to peroxisome(GO:0006625) protein localization to peroxisome(GO:0072662) establishment of protein localization to peroxisome(GO:0072663) |
1.1 | 10.9 | GO:0046784 | viral mRNA export from host cell nucleus(GO:0046784) |
0.7 | 9.2 | GO:0051382 | kinetochore assembly(GO:0051382) |
1.4 | 8.5 | GO:0051661 | maintenance of centrosome location(GO:0051661) |
0.1 | 7.9 | GO:0007224 | smoothened signaling pathway(GO:0007224) |
0.4 | 7.6 | GO:1904714 | regulation of chaperone-mediated autophagy(GO:1904714) |
2.5 | 7.5 | GO:0002188 | translation reinitiation(GO:0002188) |
0.5 | 7.5 | GO:0099514 | anterograde synaptic vesicle transport(GO:0048490) synaptic vesicle cytoskeletal transport(GO:0099514) synaptic vesicle transport along microtubule(GO:0099517) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.3 | 30.1 | GO:0005787 | signal peptidase complex(GO:0005787) |
0.1 | 14.1 | GO:0005643 | nuclear pore(GO:0005643) |
1.6 | 10.9 | GO:0000347 | THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445) |
0.6 | 8.7 | GO:0097227 | sperm annulus(GO:0097227) |
1.2 | 8.5 | GO:0036449 | microtubule minus-end(GO:0036449) |
0.0 | 8.2 | GO:0005813 | centrosome(GO:0005813) |
0.0 | 8.0 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.8 | 7.6 | GO:0005853 | eukaryotic translation elongation factor 1 complex(GO:0005853) |
0.7 | 7.5 | GO:0030123 | AP-3 adaptor complex(GO:0030123) |
0.1 | 7.5 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 30.1 | GO:0008236 | serine-type peptidase activity(GO:0008236) |
0.6 | 14.1 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.3 | 13.3 | GO:0031593 | polyubiquitin binding(GO:0031593) |
0.1 | 9.6 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.0 | 9.4 | GO:0003729 | mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822) |
0.0 | 9.1 | GO:0005516 | calmodulin binding(GO:0005516) |
0.0 | 8.7 | GO:0045296 | cadherin binding(GO:0045296) |
0.3 | 7.6 | GO:0003746 | translation elongation factor activity(GO:0003746) |
0.1 | 7.5 | GO:0008565 | protein transporter activity(GO:0008565) |
0.4 | 6.0 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.0 | PID CDC42 PATHWAY | CDC42 signaling events |
0.1 | 6.8 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.1 | 6.6 | PID P53 REGULATION PATHWAY | p53 pathway |
0.1 | 2.8 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 2.3 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.2 | PID IL1 PATHWAY | IL1-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 30.1 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.1 | 14.1 | REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION | Genes involved in Influenza Viral RNA Transcription and Replication |
1.3 | 7.6 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 7.5 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 5.3 | REACTOME DNA REPAIR | Genes involved in DNA Repair |
0.0 | 4.6 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 3.6 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.1 | 2.8 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 2.5 | REACTOME EICOSANOID LIGAND BINDING RECEPTORS | Genes involved in Eicosanoid ligand-binding receptors |
0.1 | 2.4 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |