hg19_v2_chr1_-_204380919_204380953	41.4767	AAAGUGC	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr2_+_203499901_203499911	39.6787	AAAGUGC	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr1_+_160085501_160085563	34.0106	AAAGUGC	ENST00000361216.3|ATP1A2|ENSG00000018625.10|ATPase, Na+/K+ transporting, alpha 2 polypeptide
hg19_v2_chr1_-_20812690_20812763	30.7622	AAAGUGC	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr1_+_244998602_244998646	30.6081	AAAGUGC	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr19_-_49944806_49944819	25.7789	AAAGUGC	ENST00000221485.3|SLC17A7|ENSG00000104888.5|solute carrier family 17 (vesicular glutamate transporter), member 7
hg19_v2_chr4_+_7045042_7045262	25.6551	AAAGUGC	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr19_+_18208603_18208614	25.5308	AAAGUGC	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr18_-_13726510_13726662	25.02	AAAGUGC	ENST00000322247.3|FAM210A|ENSG00000177150.8|family with sequence similarity 210, member A 	ENST00000592976.1|FAM210A|ENSG00000177150.8|family with sequence similarity 210, member A 	ENST00000402563.1|FAM210A|ENSG00000177150.8|family with sequence similarity 210, member A 	ENST00000591269.1|FAM210A|ENSG00000177150.8|family with sequence similarity 210, member A
hg19_v2_chrX_+_16737718_16737778	24.7802	AAAGUGC	ENST00000380155.3|SYAP1|ENSG00000169895.5|synapse associated protein 1
hg19_v2_chr18_+_21693306_21693322	24.6995	AAAGUGC	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr16_+_1662326_1662442	23.7216	AAAGUGC	ENST00000397412.3|CRAMP1L|ENSG00000007545.11|Crm, cramped-like (Drosophila)
hg19_v2_chr11_-_113746277_113746300	22.0719	AAAGUGC	ENST00000003302.4|USP28|ENSG00000048028.7|ubiquitin specific peptidase 28 	ENST00000545540.1|USP28|ENSG00000048028.7|ubiquitin specific peptidase 28
hg19_v2_chr12_-_16761007_16761080	21.919	AAAGUGC	ENST00000354662.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000441439.2|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr16_+_19125252_19125267	21.8496	AAAGUGC	ENST00000566735.1|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2 	ENST00000381440.3|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2
hg19_v2_chr13_+_27131887_27131899	21.6293	AAAGUGC	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr14_-_45431091_45431175	21.5858	AAAGUGC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr11_+_121322832_121322912	21.3383	AAAGUGC	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr6_-_152958521_152958549	21.3029	AAAGUGC	ENST00000367255.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000265368.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000448038.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000341594.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr11_+_45868957_45869044	20.5933	AAAGUGC	ENST00000443527.2|CRY2|ENSG00000121671.7|cryptochrome 2 (photolyase-like)
hg19_v2_chr20_-_4804244_4804293	20.3107	AAAGUGC	ENST00000379400.3|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr8_+_26435359_26435426	20.0884	AAAGUGC	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr8_-_9008206_9008222	20.0727	AAAGUGC	ENST00000310455.3|PPP1R3B|ENSG00000173281.4|protein phosphatase 1, regulatory subunit 3B
hg19_v2_chr15_+_91643442_91643521	19.6195	AAAGUGC	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chr14_+_74111578_74111730	19.3979	AAAGUGC	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr22_+_40390930_40390994	19.3475	AAAGUGC	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr15_+_68871308_68871354	19.345	AAAGUGC	ENST00000261861.5|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr4_+_156588350_156588406	18.6317	AAAGUGC	ENST00000296518.7|GUCY1A3|ENSG00000164116.12|guanylate cyclase 1, soluble, alpha 3
hg19_v2_chr19_+_50380682_50380822	18.4827	AAAGUGC	ENST00000221543.5|TBC1D17|ENSG00000104946.6|TBC1 domain family, member 17
hg19_v2_chr2_-_201936302_201936416	18.298	AAAGUGC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr2_+_25015968_25016029	18.1959	AAAGUGC	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr17_-_40897043_40897087	17.6952	AAAGUGC	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr8_+_42752053_42752154	17.6653	AAAGUGC	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chrX_+_110339439_110339605	17.61	AAAGUGC	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr6_+_107811162_107811196	17.6018	AAAGUGC	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr9_-_101471479_101471522	17.486	AAAGUGC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chrX_-_54384425_54384495	17.3469	AAAGUGC	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr9_-_111929560_111929571	17.3317	AAAGUGC	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr7_-_111846435_111846471	17.2776	AAAGUGC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr7_-_44924939_44924993	17.2636	AAAGUGC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr6_-_167040731_167040745	17.1677	AAAGUGC	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr1_+_145438469_145438501	16.8905	AAAGUGC	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr11_-_18656028_18656040	16.8202	AAAGUGC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr3_-_13009168_13009236	16.4483	AAAGUGC	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr2_+_10183651_10183713	16.3113	AAAGUGC	ENST00000305883.1|KLF11|ENSG00000172059.6|Kruppel-like factor 11
hg19_v2_chr6_+_121756809_121756838	15.6555	AAAGUGC	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr19_+_1205740_1205792	15.5707	AAAGUGC	ENST00000326873.7|STK11|ENSG00000118046.10|serine/threonine kinase 11
hg19_v2_chr16_-_2185899_2185899	14.9796	AAAGUGC	ENST00000262304.4|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant) 	ENST00000423118.1|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant)
hg19_v2_chr7_+_108210012_108210012	14.9186	AAAGUGC	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr17_+_7184986_7185076	14.7809	AAAGUGC	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chr11_+_14665263_14665274	14.6247	AAAGUGC	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr6_-_137113604_137113666	14.466	AAAGUGC	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr15_+_75287861_75287961	14.4367	AAAGUGC	ENST00000425597.3|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562327.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000568018.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562212.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000567920.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000566872.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000361900.6|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000545456.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5
hg19_v2_chr14_-_77843390_77843462	14.3045	AAAGUGC	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr1_+_84543734_84543775	14.2899	AAAGUGC	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr7_-_105029329_105029376	14.094	AAAGUGC	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr4_-_36246060_36246167	14.0094	AAAGUGC	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr2_-_96811170_96811186	14.0	AAAGUGC	ENST00000288943.4|DUSP2|ENSG00000158050.4|dual specificity phosphatase 2
hg19_v2_chr5_+_140213815_140213969	13.9711	AAAGUGC	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr5_+_140306478_140306478	13.9128	AAAGUGC	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr5_+_140254884_140255058	13.7965	AAAGUGC	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr20_+_32951041_32951067	13.7963	AAAGUGC	ENST00000374864.4|ITCH|ENSG00000078747.8|itchy E3 ubiquitin protein ligase
hg19_v2_chr21_-_32931290_32931341	13.6247	AAAGUGC	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr11_+_118401706_118401803	13.5741	AAAGUGC	ENST00000411589.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000442938.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000359862.4|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr16_+_53468332_53468414	13.4179	AAAGUGC	ENST00000262133.6|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr5_-_65017921_65017968	13.2651	AAAGUGC	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr9_-_86571628_86571639	13.1946	AAAGUGC	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr9_+_99212403_99212536	13.0997	AAAGUGC	ENST00000375251.3|HABP4|ENSG00000130956.9|hyaluronan binding protein 4 	ENST00000375249.4|HABP4|ENSG00000130956.9|hyaluronan binding protein 4
hg19_v2_chr17_-_8055747_8055758	13.0641	AAAGUGC	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr20_-_47894569_47894799	12.8688	AAAGUGC	ENST00000371744.1|ZNFX1|ENSG00000124201.10|zinc finger, NFX1-type containing 1 	ENST00000371752.1|ZNFX1|ENSG00000124201.10|zinc finger, NFX1-type containing 1 	ENST00000396105.1|ZNFX1|ENSG00000124201.10|zinc finger, NFX1-type containing 1
hg19_v2_chr2_-_206950781_206950947	12.6833	AAAGUGC	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr10_+_76871454_76871467	12.5986	AAAGUGC	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr2_+_27070964_27071027	12.4805	AAAGUGC	ENST00000288699.6|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr4_+_78078304_78078406	12.4531	AAAGUGC	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr11_-_1593150_1593150	12.4367	AAAGUGC	ENST00000397374.3|DUSP8|ENSG00000184545.6|dual specificity phosphatase 8
hg19_v2_chrX_+_23352133_23352229	12.3482	AAAGUGC	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr11_-_108093329_108093375	12.156	AAAGUGC	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr14_-_75593708_75593783	12.0981	AAAGUGC	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr9_-_130742792_130742821	12.0097	AAAGUGC	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr9_+_82186872_82186898	11.9433	AAAGUGC	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr6_-_154677900_154677944	11.9261	AAAGUGC	ENST00000265198.4|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1 	ENST00000520261.1|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1
hg19_v2_chr2_-_157189180_157189290	11.9042	AAAGUGC	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr5_+_140220769_140220907	11.8198	AAAGUGC	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr3_-_18466787_18466861	11.7538	AAAGUGC	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr2_-_2334888_2335053	11.5567	AAAGUGC	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chrX_+_133507327_133507386	11.5348	AAAGUGC	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr1_-_230561475_230561475	11.5173	AAAGUGC	ENST00000391860.1|PGBD5|ENSG00000177614.5|piggyBac transposable element derived 5
hg19_v2_chr16_-_2264779_2264847	11.4221	AAAGUGC	ENST00000333503.7|PGP|ENSG00000184207.8|phosphoglycolate phosphatase
hg19_v2_chr5_+_140248518_140248689	11.324	AAAGUGC	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr17_+_17942594_17942606	11.2928	AAAGUGC	ENST00000268719.4|GID4|ENSG00000141034.5|GID complex subunit 4
hg19_v2_chr5_-_174871136_174871211	11.263	AAAGUGC	ENST00000393752.2|DRD1|ENSG00000184845.3|dopamine receptor D1
hg19_v2_chr13_+_113622810_113622830	11.2175	AAAGUGC	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr8_-_27630102_27630172	11.1949	AAAGUGC	ENST00000356537.4|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25 	ENST00000522915.1|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25 	ENST00000539095.1|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25
hg19_v2_chr1_+_10271674_10271674	11.1852	AAAGUGC	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr7_-_143059845_143059866	11.1738	AAAGUGC	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr12_+_122064398_122064484	11.1615	AAAGUGC	ENST00000330079.7|ORAI1|ENSG00000182500.7|ORAI calcium release-activated calcium modulator 1
hg19_v2_chr1_-_207224307_207224422	10.9884	AAAGUGC	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr8_-_134584152_134584213	10.96	AAAGUGC	ENST00000521180.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000517668.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000319914.5|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr6_-_136871957_136872006	10.9315	AAAGUGC	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr2_+_70142189_70142223	10.9296	AAAGUGC	ENST00000264444.2|MXD1|ENSG00000059728.6|MAX dimerization protein 1
hg19_v2_chr1_-_25573977_25574010	10.9288	AAAGUGC	ENST00000243189.7|C1orf63|ENSG00000117616.13|chromosome 1 open reading frame 63
hg19_v2_chr17_+_42264395_42264418	10.8232	AAAGUGC	ENST00000587989.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000590235.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr7_+_100136811_100136882	10.8118	AAAGUGC	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr19_+_36208877_36208921	10.5592	AAAGUGC	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chr20_+_9494987_9495027	10.5549	AAAGUGC	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr3_-_114790179_114790222	10.5428	AAAGUGC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr2_+_24163281_24163363	10.5221	AAAGUGC	ENST00000309033.4|UBXN2A|ENSG00000173960.8|UBX domain protein 2A
hg19_v2_chr10_-_120514720_120514758	10.4833	AAAGUGC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr2_-_68694390_68694434	10.4352	AAAGUGC	ENST00000377957.3|FBXO48|ENSG00000204923.3|F-box protein 48
hg19_v2_chr18_-_53255766_53255860	10.4023	AAAGUGC	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_-_226924980_226925159	10.3956	AAAGUGC	ENST00000272117.3|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B
hg19_v2_chr20_-_42939782_42939858	10.3804	AAAGUGC	ENST00000396825.3|FITM2|ENSG00000197296.5|fat storage-inducing transmembrane protein 2
hg19_v2_chr10_-_91295304_91295329	10.3731	AAAGUGC	ENST00000341233.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12 	ENST00000371790.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12
hg19_v2_chr15_-_72410109_72410161	10.0528	AAAGUGC	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr11_-_46722117_46722183	10.037	AAAGUGC	ENST00000311956.4|ARHGAP1|ENSG00000175220.7|Rho GTPase activating protein 1
hg19_v2_chr3_-_15374033_15374136	10.0303	AAAGUGC	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr14_-_96830207_96830207	10.0253	AAAGUGC	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr7_+_138916231_138916231	10.014	AAAGUGC	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr2_+_29338236_29338439	9.9709	AAAGUGC	ENST00000320081.5|CLIP4|ENSG00000115295.15|CAP-GLY domain containing linker protein family, member 4
hg19_v2_chr5_-_693500_693511	9.76541	AAAGUGC	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr12_+_72233487_72233563	9.7352	AAAGUGC	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chrX_+_37208521_37208539	9.5865	AAAGUGC	ENST00000378628.4|PRRG1|ENSG00000130962.13|proline rich Gla (G-carboxyglutamic acid) 1
hg19_v2_chr5_+_172483347_172483407	9.55604	AAAGUGC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr12_-_42538657_42538720	9.5502	AAAGUGC	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr2_-_197036289_197036314	9.48937	AAAGUGC	ENST00000263955.4|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr17_+_29718642_29718656	9.40232	AAAGUGC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr17_+_53342311_53342400	9.36868	AAAGUGC	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr2_-_222436988_222437031	9.29675	AAAGUGC	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chr22_-_22090064_22090127	9.28936	AAAGUGC	ENST00000339468.3|YPEL1|ENSG00000100027.10|yippee-like 1 (Drosophila)
hg19_v2_chr3_-_53080047_53080103	9.23396	AAAGUGC	ENST00000482396.1|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000358080.2|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000296295.6|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000394752.3|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1
hg19_v2_chr8_-_19459993_19460011	9.12772	AAAGUGC	ENST00000454498.2|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1 	ENST00000520003.1|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1
hg19_v2_chr1_+_183605200_183605220	9.0477	AAAGUGC	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr17_-_4167142_4167281	9.02943	AAAGUGC	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr2_+_173600671_173600709	8.99388	AAAGUGC	ENST00000409036.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr12_+_56401268_56401443	8.94673	AAAGUGC	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr3_+_141205852_141205929	8.79845	AAAGUGC	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr1_+_210001309_210001411	8.7951	AAAGUGC	ENST00000491415.2|DIEXF|ENSG00000117597.13|digestive organ expansion factor homolog (zebrafish)
hg19_v2_chr2_-_73340146_73340185	8.68737	AAAGUGC	ENST00000258098.6|RAB11FIP5|ENSG00000135631.11|RAB11 family interacting protein 5 (class I)
hg19_v2_chr1_+_19923454_19923561	8.67772	AAAGUGC	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr9_-_23821273_23821313	8.65941	AAAGUGC	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr11_-_74109422_74109518	8.64974	AAAGUGC	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr17_+_36508111_36508128	8.60189	AAAGUGC	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr14_+_57857262_57857334	8.55115	AAAGUGC	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr2_-_218808771_218808851	8.489	AAAGUGC	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr15_+_65134088_65134147	8.47478	AAAGUGC	ENST00000323544.4|PLEKHO2|ENSG00000241839.5|pleckstrin homology domain containing, family O member 2 	ENST00000437723.1|AC069368.3|ENSG00000249240.2|Uncharacterized protein
hg19_v2_chr6_+_148663729_148663847	8.46914	AAAGUGC	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr5_+_140345820_140345820	8.4259	AAAGUGC	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr10_+_120789223_120789231	8.17209	AAAGUGC	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr5_+_67511524_67511628	8.04045	AAAGUGC	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr12_+_108908962_108909094	8.00545	AAAGUGC	ENST00000552695.1|FICD|ENSG00000198855.2|FIC domain containing 	ENST00000552758.1|FICD|ENSG00000198855.2|FIC domain containing 	ENST00000361549.2|FICD|ENSG00000198855.2|FIC domain containing
hg19_v2_chr14_-_91526922_91527001	7.89061	AAAGUGC	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chrX_-_18372792_18372847	7.87777	AAAGUGC	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr5_+_140227048_140227048	7.84415	AAAGUGC	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr20_-_48099182_48099214	7.84231	AAAGUGC	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr18_+_9136758_9136852	7.83183	AAAGUGC	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr1_-_47184723_47184736	7.79357	AAAGUGC	ENST00000371933.3|EFCAB14|ENSG00000159658.6|EF-hand calcium binding domain 14
hg19_v2_chr3_-_66551351_66551356	7.76889	AAAGUGC	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr3_-_142166904_142166916	7.75907	AAAGUGC	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr9_-_73029540_73029540	7.7301	AAAGUGC	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr2_-_69870835_69870853	7.71889	AAAGUGC	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr6_+_139456226_139456300	7.6733	AAAGUGC	ENST00000367658.2|HECA|ENSG00000112406.4|headcase homolog (Drosophila)
hg19_v2_chrX_-_153363188_153363212	7.6569	AAAGUGC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chrX_-_57937067_57937067	7.63801	AAAGUGC	ENST00000358697.4|ZXDA|ENSG00000198205.5|zinc finger, X-linked, duplicated A
hg19_v2_chr1_+_160336851_160336868	7.51608	AAAGUGC	ENST00000302101.5|NHLH1|ENSG00000171786.5|nescient helix loop helix 1
hg19_v2_chr3_-_9291063_9291136	7.51219	AAAGUGC	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr15_+_92937058_92937133	7.49057	AAAGUGC	ENST00000268164.3|ST8SIA2|ENSG00000140557.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
hg19_v2_chr11_+_92085262_92085262	7.48665	AAAGUGC	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr6_-_169654139_169654139	7.45691	AAAGUGC	ENST00000366787.3|THBS2|ENSG00000186340.10|thrombospondin 2
hg19_v2_chr2_+_220042933_220042985	7.4224	AAAGUGC	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr2_-_103353277_103353365	7.40189	AAAGUGC	ENST00000258436.5|MFSD9|ENSG00000135953.6|major facilitator superfamily domain containing 9
hg19_v2_chr16_-_53537105_53537163	7.3972	AAAGUGC	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr2_+_16080659_16080686	7.36009	AAAGUGC	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr2_+_166095898_166095940	7.25282	AAAGUGC	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr1_+_101702417_101702481	7.17042	AAAGUGC	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr16_-_87417351_87417392	7.15627	AAAGUGC	ENST00000311635.7|FBXO31|ENSG00000103264.11|F-box protein 31
hg19_v2_chr1_+_118148556_118148681	7.14209	AAAGUGC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr10_-_104178857_104178919	7.10566	AAAGUGC	ENST00000020673.5|PSD|ENSG00000059915.12|pleckstrin and Sec7 domain containing
hg19_v2_chr3_+_20081515_20081570	7.07089	AAAGUGC	ENST00000263754.4|KAT2B|ENSG00000114166.7|K(lysine) acetyltransferase 2B
hg19_v2_chr2_-_240322643_240322661	7.04751	AAAGUGC	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr19_-_344786_344826	6.97726	AAAGUGC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr5_+_140165876_140165876	6.93994	AAAGUGC	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr12_+_69864129_69864222	6.93807	AAAGUGC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr22_+_50781723_50781784	6.92016	AAAGUGC	ENST00000359139.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395741.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395744.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2
hg19_v2_chr4_-_39640700_39640712	6.9114	AAAGUGC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr3_-_149688896_149688970	6.8902	AAAGUGC	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr4_+_6271558_6271594	6.86184	AAAGUGC	ENST00000503569.1|WFS1|ENSG00000109501.9|Wolfram syndrome 1 (wolframin) 	ENST00000226760.1|WFS1|ENSG00000109501.9|Wolfram syndrome 1 (wolframin)
hg19_v2_chr10_+_111967345_111967442	6.82946	AAAGUGC	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr12_+_57943781_57943869	6.76655	AAAGUGC	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr18_+_10454594_10454645	6.75901	AAAGUGC	ENST00000355285.5|APCDD1|ENSG00000154856.8|adenomatosis polyposis coli down-regulated 1
hg19_v2_chr21_+_45432174_45432254	6.68398	AAAGUGC	ENST00000380221.3|TRAPPC10|ENSG00000160218.8|trafficking protein particle complex 10 	ENST00000291574.4|TRAPPC10|ENSG00000160218.8|trafficking protein particle complex 10
hg19_v2_chr17_-_4890919_4890985	6.6503	AAAGUGC	ENST00000572543.1|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000381311.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000348066.3|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000358183.4|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chr17_+_41132564_41132600	6.57364	AAAGUGC	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr4_-_15656923_15657035	6.55822	AAAGUGC	ENST00000382358.4|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5 	ENST00000412094.2|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5 	ENST00000341285.3|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5
hg19_v2_chr9_-_125675576_125675612	6.5421	AAAGUGC	ENST00000373659.3|ZBTB6|ENSG00000186130.4|zinc finger and BTB domain containing 6
hg19_v2_chr4_-_53525406_53525502	6.5251	AAAGUGC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr5_+_149109825_149109907	6.45621	AAAGUGC	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chrX_+_122993827_122993910	6.40815	AAAGUGC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr19_-_6279932_6280000	6.40587	AAAGUGC	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr1_-_23857698_23857733	6.35644	AAAGUGC	ENST00000361729.2|E2F2|ENSG00000007968.6|E2F transcription factor 2
hg19_v2_chr12_+_32655048_32655108	6.34492	AAAGUGC	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr5_-_131826457_131826514	6.28376	AAAGUGC	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr20_+_8112824_8112925	6.27098	AAAGUGC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr4_+_94750014_94750042	6.25743	AAAGUGC	ENST00000306011.3|ATOH1|ENSG00000172238.3|atonal homolog 1 (Drosophila)
hg19_v2_chr11_-_129872712_129872755	6.22076	AAAGUGC	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr3_+_14989076_14989113	6.21072	AAAGUGC	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr13_+_42846272_42846334	6.19692	AAAGUGC	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr12_-_50297638_50297691	6.1947	AAAGUGC	ENST00000320634.3|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr14_+_23775971_23776000	6.18082	AAAGUGC	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chrX_+_119384607_119384720	6.11555	AAAGUGC	ENST00000326624.2|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33 	ENST00000557385.1|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33
hg19_v2_chr13_-_29292956_29293026	6.05639	AAAGUGC	ENST00000266943.6|SLC46A3|ENSG00000139508.10|solute carrier family 46, member 3
hg19_v2_chr2_-_96931679_96931756	6.04634	AAAGUGC	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr4_+_72204755_72204778	6.00237	AAAGUGC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr19_-_4066890_4066943	5.98537	AAAGUGC	ENST00000322357.4|ZBTB7A|ENSG00000178951.4|zinc finger and BTB domain containing 7A
hg19_v2_chr13_-_30881621_30881675	5.98254	AAAGUGC	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr12_+_8185288_8185339	5.93089	AAAGUGC	ENST00000162391.3|FOXJ2|ENSG00000065970.4|forkhead box J2
hg19_v2_chr15_+_91073111_91073191	5.90303	AAAGUGC	ENST00000420329.2|CRTC3|ENSG00000140577.11|CREB regulated transcription coactivator 3
hg19_v2_chr3_-_56835967_56835995	5.8905	AAAGUGC	ENST00000495373.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000296315.3|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr8_-_87755878_87755933	5.84995	AAAGUGC	ENST00000320005.5|CNGB3|ENSG00000170289.8|cyclic nucleotide gated channel beta 3
hg19_v2_chr3_-_57199397_57199432	5.84658	AAAGUGC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr15_-_64648273_64648442	5.84009	AAAGUGC	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr1_+_33005020_33005077	5.81114	AAAGUGC	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr12_-_66524482_66524548	5.80417	AAAGUGC	ENST00000446587.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia) 	ENST00000266604.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia)
hg19_v2_chr20_+_1875110_1875154	5.74159	AAAGUGC	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr5_+_56111361_56111403	5.69588	AAAGUGC	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr1_+_109792641_109792641	5.643	AAAGUGC	ENST00000271332.3|CELSR2|ENSG00000143126.7|cadherin, EGF LAG seven-pass G-type receptor 2
hg19_v2_chr13_+_115047053_115047095	5.63798	AAAGUGC	ENST00000375299.3|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr2_-_235405679_235405739	5.63426	AAAGUGC	ENST00000390645.2|ARL4C|ENSG00000188042.5|ADP-ribosylation factor-like 4C
hg19_v2_chr5_-_132299313_132299334	5.62994	AAAGUGC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr5_-_150948414_150948505	5.61221	AAAGUGC	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr2_-_183731882_183731896	5.55855	AAAGUGC	ENST00000295113.4|FRZB|ENSG00000162998.4|frizzled-related protein
hg19_v2_chr10_+_104404218_104404253	5.50072	AAAGUGC	ENST00000302424.7|TRIM8|ENSG00000171206.9|tripartite motif containing 8
hg19_v2_chr20_+_49348081_49348096	5.48759	AAAGUGC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr7_-_142583506_142583510	5.47115	AAAGUGC	ENST00000359396.3|TRPV6|ENSG00000165125.13|transient receptor potential cation channel, subfamily V, member 6
hg19_v2_chr1_+_213123915_213123955	5.40106	AAAGUGC	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr10_+_86088381_86088436	5.37946	AAAGUGC	ENST00000224756.8|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2 	ENST00000372088.2|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr12_+_132379160_132379201	5.37122	AAAGUGC	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr13_+_42622781_42622889	5.35664	AAAGUGC	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr11_-_73309228_73309257	5.32797	AAAGUGC	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr11_+_68228186_68228281	5.30602	AAAGUGC	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr8_+_28747884_28747938	5.29362	AAAGUGC	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr2_+_203879568_203879611	5.23484	AAAGUGC	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr17_-_66287257_66287276	5.19698	AAAGUGC	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr8_+_1449532_1449532	5.16607	AAAGUGC	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr7_-_124405681_124405709	5.13901	AAAGUGC	ENST00000303921.2|GPR37|ENSG00000170775.2|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v2_chr14_-_93799360_93799438	5.13604	AAAGUGC	ENST00000334746.5|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000554565.1|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000298896.3|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7
hg19_v2_chr16_+_29984962_29984962	5.12735	AAAGUGC	ENST00000308893.4|TAOK2|ENSG00000149930.13|TAO kinase 2
hg19_v2_chr1_-_6240183_6240219	5.12386	AAAGUGC	ENST00000262450.3|CHD5|ENSG00000116254.13|chromodomain helicase DNA binding protein 5 	ENST00000378021.1|CHD5|ENSG00000116254.13|chromodomain helicase DNA binding protein 5
hg19_v2_chr5_+_140261703_140261854	4.9801	AAAGUGC	ENST00000409494.1|PCDHA13|ENSG00000239389.3|protocadherin alpha 13 	ENST00000289272.2|PCDHA13|ENSG00000239389.3|protocadherin alpha 13
hg19_v2_chr5_+_140186647_140186773	4.97825	AAAGUGC	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr12_-_93323013_93323112	4.94149	AAAGUGC	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr16_-_70719925_70719989	4.86304	AAAGUGC	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr21_-_34863998_34864060	4.85311	AAAGUGC	ENST00000402202.1|DNAJC28|ENSG00000177692.7|DnaJ (Hsp40) homolog, subfamily C, member 28 	ENST00000381947.3|DNAJC28|ENSG00000177692.7|DnaJ (Hsp40) homolog, subfamily C, member 28
hg19_v2_chr11_+_111473108_111473226	4.82715	AAAGUGC	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr7_+_20370746_20370778	4.82251	AAAGUGC	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr13_+_113951532_113951594	4.80196	AAAGUGC	ENST00000332556.4|LAMP1|ENSG00000185896.9|lysosomal-associated membrane protein 1
hg19_v2_chr12_-_26278030_26278060	4.75435	AAAGUGC	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr22_-_22221900_22221970	4.74809	AAAGUGC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr20_-_35724388_35724415	4.68722	AAAGUGC	ENST00000344359.3|RBL1|ENSG00000080839.7|retinoblastoma-like 1 (p107) 	ENST00000373664.3|RBL1|ENSG00000080839.7|retinoblastoma-like 1 (p107)
hg19_v2_chr15_+_89164520_89164559	4.64193	AAAGUGC	ENST00000332810.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr11_-_123612319_123612395	4.59544	AAAGUGC	ENST00000526252.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000530393.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000533463.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000336139.4|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000529691.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000528306.1|ZNF202|ENSG00000166261.6|zinc finger protein 202
hg19_v2_chr17_-_43568062_43568110	4.56903	AAAGUGC	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr9_-_32552551_32552576	4.55554	AAAGUGC	ENST00000360538.2|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 	ENST00000379858.1|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v2_chr6_+_117002339_117002400	4.5224	AAAGUGC	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr8_+_38614807_38614851	4.52	AAAGUGC	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr5_-_112630598_112630689	4.50405	AAAGUGC	ENST00000302475.4|MCC|ENSG00000171444.13|mutated in colorectal cancers
hg19_v2_chr7_-_14029515_14029642	4.49737	AAAGUGC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr12_-_53893399_53893478	4.42441	AAAGUGC	ENST00000267079.2|MAP3K12|ENSG00000139625.8|mitogen-activated protein kinase kinase kinase 12
hg19_v2_chr5_-_9546180_9546195	4.34506	AAAGUGC	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr13_-_29069232_29069272	4.30356	AAAGUGC	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr15_+_85923856_85923987	4.28118	AAAGUGC	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr5_+_139493665_139493718	4.22048	AAAGUGC	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr1_-_26324534_26324648	4.20616	AAAGUGC	ENST00000374284.1|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa 	ENST00000441420.1|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa 	ENST00000374282.3|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa
hg19_v2_chr13_-_26795840_26795995	4.18901	AAAGUGC	ENST00000381570.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000399762.2|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000346166.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6
hg19_v2_chr8_+_26240414_26240631	4.13431	AAAGUGC	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr2_+_110371905_110371950	4.11156	AAAGUGC	ENST00000356454.3|SOWAHC|ENSG00000198142.3|sosondowah ankyrin repeat domain family member C
hg19_v2_chr5_+_140207536_140207650	4.10657	AAAGUGC	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr5_-_134871639_134871660	4.09612	AAAGUGC	ENST00000314744.4|NEUROG1|ENSG00000181965.4|neurogenin 1
hg19_v2_chr3_-_46037299_46037337	4.0768	AAAGUGC	ENST00000296137.2|FYCO1|ENSG00000163820.10|FYVE and coiled-coil domain containing 1
hg19_v2_chr2_+_219246746_219246759	4.02415	AAAGUGC	ENST00000233202.6|SLC11A1|ENSG00000018280.12|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
hg19_v2_chr15_-_73661605_73661605	4.00737	AAAGUGC	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr11_+_35684288_35684353	4.00703	AAAGUGC	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr14_-_99737565_99737617	4.00548	AAAGUGC	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr9_+_129567282_129567353	3.98434	AAAGUGC	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr14_-_92506371_92506418	3.95347	AAAGUGC	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr3_-_170626418_170626482	3.92198	AAAGUGC	ENST00000474096.1|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2 	ENST00000295822.2|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2
hg19_v2_chr2_-_166930131_166930149	3.915	AAAGUGC	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr4_-_88141755_88141791	3.87467	AAAGUGC	ENST00000273963.5|KLHL8|ENSG00000145332.9|kelch-like family member 8
hg19_v2_chr20_-_9819479_9819532	3.85997	AAAGUGC	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr15_-_75165651_75165714	3.84178	AAAGUGC	ENST00000562363.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000564529.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000268099.9|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2
hg19_v2_chr9_-_127703333_127703398	3.78149	AAAGUGC	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr14_+_71108460_71108508	3.76735	AAAGUGC	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr1_+_3607228_3607250	3.71083	AAAGUGC	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr4_+_53728457_53728492	3.68162	AAAGUGC	ENST00000248706.3|RASL11B|ENSG00000128045.5|RAS-like, family 11, member B
hg19_v2_chr17_-_16118835_16118867	3.68135	AAAGUGC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr2_+_176972000_176972025	3.66403	AAAGUGC	ENST00000249504.5|HOXD11|ENSG00000128713.11|homeobox D11
hg19_v2_chr11_-_1330834_1330884	3.66235	AAAGUGC	ENST00000525159.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000317204.6|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000542915.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000527938.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000530541.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000263646.7|TOLLIP|ENSG00000078902.11|toll interacting protein
hg19_v2_chr2_+_135676381_135676435	3.64562	AAAGUGC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr17_+_38219063_38219154	3.63839	AAAGUGC	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr11_-_9025541_9025596	3.63442	AAAGUGC	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr2_+_46524537_46524553	3.58101	AAAGUGC	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr19_+_16940198_16940237	3.54013	AAAGUGC	ENST00000248054.5|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000596802.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000379803.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B
hg19_v2_chr10_-_105615164_105615323	3.4976	AAAGUGC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr4_-_85418103_85418103	3.49212	AAAGUGC	ENST00000515820.2|NKX6-1|ENSG00000163623.5|NK6 homeobox 1
hg19_v2_chr10_+_60272814_60272900	3.4024	AAAGUGC	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr14_+_33408449_33408525	3.39797	AAAGUGC	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr8_-_127570603_127570648	3.37811	AAAGUGC	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr12_-_51611477_51611612	3.34957	AAAGUGC	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr8_-_30891078_30891231	3.34163	AAAGUGC	ENST00000339382.2|PURG|ENSG00000172733.10|purine-rich element binding protein G 	ENST00000475541.1|PURG|ENSG00000172733.10|purine-rich element binding protein G
hg19_v2_chr8_+_28351707_28351781	3.34013	AAAGUGC	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr9_-_13279589_13279629	3.30428	AAAGUGC	ENST00000319217.7|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr2_+_27193480_27193548	3.28655	AAAGUGC	ENST00000233121.2|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3 	ENST00000405074.3|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3
hg19_v2_chr1_-_23495340_23495357	3.28242	AAAGUGC	ENST00000418342.1|LUZP1|ENSG00000169641.9|leucine zipper protein 1
hg19_v2_chr8_+_123793633_123793703	3.2735	AAAGUGC	ENST00000314393.4|ZHX2|ENSG00000178764.6|zinc fingers and homeoboxes 2
hg19_v2_chr19_-_2151523_2151585	3.26691	AAAGUGC	ENST00000350812.6|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000355272.6|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000356926.4|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000345016.5|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit
hg19_v2_chr1_-_157015162_157015162	3.25816	AAAGUGC	ENST00000368194.3|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr5_-_114515734_114515944	3.25491	AAAGUGC	ENST00000514154.1|TRIM36|ENSG00000152503.5|tripartite motif containing 36 	ENST00000282369.3|TRIM36|ENSG00000152503.5|tripartite motif containing 36
hg19_v2_chr2_-_242041607_242041747	3.23266	AAAGUGC	ENST00000434791.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000401626.2|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000439144.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000406593.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000495694.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000407095.3|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000391980.2|MTERFD2|ENSG00000122085.12|MTERF domain containing 2
hg19_v2_chr3_+_51428704_51428737	3.23084	AAAGUGC	ENST00000323686.4|RBM15B|ENSG00000179837.6|RNA binding motif protein 15B
hg19_v2_chr12_-_110434021_110434034	3.20997	AAAGUGC	ENST00000355312.3|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000551209.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000550186.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr10_-_64576105_64576133	3.1986	AAAGUGC	ENST00000242480.3|EGR2|ENSG00000122877.9|early growth response 2 	ENST00000411732.1|EGR2|ENSG00000122877.9|early growth response 2
hg19_v2_chr4_+_144257915_144258009	3.19237	AAAGUGC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr5_-_171433819_171433911	3.17879	AAAGUGC	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr3_-_169899504_169899542	3.16232	AAAGUGC	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr5_+_135468516_135468621	3.15204	AAAGUGC	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr21_-_36260980_36261011	3.14981	AAAGUGC	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr21_+_47878757_47879024	3.14522	AAAGUGC	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chrX_+_14891522_14891593	3.11929	AAAGUGC	ENST00000380492.3|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2 	ENST00000482354.1|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2
hg19_v2_chrX_+_24483338_24483573	3.0826	AAAGUGC	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
hg19_v2_chr10_-_71332994_71332994	3.06734	AAAGUGC	ENST00000242462.4|NEUROG3|ENSG00000122859.4|neurogenin 3
hg19_v2_chr12_+_4382917_4382938	3.03983	AAAGUGC	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr1_-_236445251_236445319	3.00121	AAAGUGC	ENST00000354619.5|ERO1LB|ENSG00000086619.9|ERO1-like beta (S. cerevisiae) 	ENST00000327333.8|ERO1LB|ENSG00000086619.9|ERO1-like beta (S. cerevisiae)
hg19_v2_chr4_-_141677267_141677291	2.96361	AAAGUGC	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr1_+_52682052_52682052	2.96312	AAAGUGC	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr1_+_203274639_203274664	2.96072	AAAGUGC	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr9_-_19786926_19786926	2.957	AAAGUGC	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr5_+_140235469_140235634	2.95025	AAAGUGC	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr11_+_35639735_35639735	2.93578	AAAGUGC	ENST00000317811.4|FJX1|ENSG00000179431.5|four jointed box 1 (Drosophila)
hg19_v2_chr1_-_179198702_179198741	2.90619	AAAGUGC	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr10_-_23003460_23003562	2.88408	AAAGUGC	ENST00000376573.4|PIP4K2A|ENSG00000150867.9|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg19_v2_chr19_+_45754505_45754577	2.87983	AAAGUGC	ENST00000262891.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4 	ENST00000300843.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr4_+_55095264_55095390	2.82063	AAAGUGC	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr1_-_95007193_95007356	2.79378	AAAGUGC	ENST00000370207.4|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor) 	ENST00000334047.7|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor)
hg19_v2_chr20_+_33814457_33814506	2.77938	AAAGUGC	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr10_-_94003003_94003013	2.72732	AAAGUGC	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr11_-_64684672_64684722	2.67826	AAAGUGC	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr14_+_52734401_52734530	2.64632	AAAGUGC	ENST00000306051.2|PTGDR|ENSG00000168229.3|prostaglandin D2 receptor (DP) 	ENST00000553372.1|PTGDR|ENSG00000168229.3|prostaglandin D2 receptor (DP)
hg19_v2_chr11_+_117014983_117015017	2.63745	AAAGUGC	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr16_+_81348528_81348578	2.63348	AAAGUGC	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr7_-_112430647_112430776	2.60796	AAAGUGC	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr16_+_55512742_55512929	2.58305	AAAGUGC	ENST00000568715.1|MMP2|ENSG00000087245.8|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) 	ENST00000219070.4|MMP2|ENSG00000087245.8|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
hg19_v2_chr2_+_111878483_111878506	2.56306	AAAGUGC	ENST00000308659.8|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000357757.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393253.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000337565.5|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393256.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr8_+_50824233_50824354	2.52804	AAAGUGC	ENST00000522124.1|SNTG1|ENSG00000147481.9|syntrophin, gamma 1
hg19_v2_chr1_-_160040038_160040064	2.51374	AAAGUGC	ENST00000368089.3|KCNJ10|ENSG00000177807.6|potassium inwardly-rectifying channel, subfamily J, member 10
hg19_v2_chr17_+_61699766_61699826	2.4874	AAAGUGC	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr7_+_35840542_35840671	2.47153	AAAGUGC	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr1_-_161102421_161102478	2.46767	AAAGUGC	ENST00000490843.2|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000368006.3|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000392188.1|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000545495.1|DEDD|ENSG00000158796.12|death effector domain containing
hg19_v2_chr14_+_69865401_69865426	2.41993	AAAGUGC	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr1_-_47697387_47697457	2.3828	AAAGUGC	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr10_+_104678032_104678094	2.31836	AAAGUGC	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr10_-_735553_735683	2.30705	AAAGUGC	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr9_+_131174024_131174054	2.29399	AAAGUGC	ENST00000420034.1|CERCAM|ENSG00000167123.14|cerebral endothelial cell adhesion molecule 	ENST00000372842.1|CERCAM|ENSG00000167123.14|cerebral endothelial cell adhesion molecule
hg19_v2_chr1_-_85156216_85156240	2.2925	AAAGUGC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr6_-_89827720_89827805	2.26016	AAAGUGC	ENST00000452027.2|SRSF12|ENSG00000154548.8|serine/arginine-rich splicing factor 12
hg19_v2_chr18_-_67624160_67624238	2.23626	AAAGUGC	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr11_+_118307179_118307228	2.22442	AAAGUGC	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr4_+_6784401_6784510	2.2212	AAAGUGC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr19_+_1752372_1752372	2.20998	AAAGUGC	ENST00000382349.4|ONECUT3|ENSG00000205922.4|one cut homeobox 3
hg19_v2_chr1_-_15850839_15850940	2.20754	AAAGUGC	ENST00000348549.5|CASP9|ENSG00000132906.13|caspase 9, apoptosis-related cysteine peptidase 	ENST00000546424.1|CASP9|ENSG00000132906.13|caspase 9, apoptosis-related cysteine peptidase
hg19_v2_chr17_+_16593539_16593639	2.19965	AAAGUGC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr18_-_5296001_5296045	2.1582	AAAGUGC	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr20_+_43104508_43104540	2.11074	AAAGUGC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr17_+_5031687_5031687	2.09195	AAAGUGC	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr22_-_22863466_22863505	2.06141	AAAGUGC	ENST00000406426.1|ZNF280B|ENSG00000198477.3|zinc finger protein 280B 	ENST00000360412.2|ZNF280B|ENSG00000198477.3|zinc finger protein 280B
hg19_v2_chr14_-_34420259_34420291	2.06	AAAGUGC	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr1_-_160232197_160232284	2.05793	AAAGUGC	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr1_-_150552006_150552093	2.04769	AAAGUGC	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr12_+_57984965_57985059	2.03014	AAAGUGC	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr20_+_46130601_46130613	2.02636	AAAGUGC	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr10_-_30348439_30348531	2.01233	AAAGUGC	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr7_+_30067973_30068063	2.00926	AAAGUGC	ENST00000258679.7|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000449726.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396257.2|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396259.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg19_v2_chr3_+_196594727_196594816	1.99084	AAAGUGC	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr3_-_129407535_129407575	1.94235	AAAGUGC	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr11_-_86666427_86666450	1.93174	AAAGUGC	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr3_+_179065474_179065530	1.91317	AAAGUGC	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr1_+_19970657_19970796	1.89274	AAAGUGC	ENST00000375136.3|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr3_-_197476560_197476577	1.85225	AAAGUGC	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr11_+_119019722_119019769	1.84148	AAAGUGC	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr12_-_118797475_118797527	1.81223	AAAGUGC	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr1_+_244214577_244214593	1.78092	AAAGUGC	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr8_-_23315190_23315235	1.77065	AAAGUGC	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr8_+_70378852_70378866	1.76448	AAAGUGC	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr1_-_25291475_25291511	1.76023	AAAGUGC	ENST00000338888.3|RUNX3|ENSG00000020633.14|runt-related transcription factor 3 	ENST00000399916.1|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr22_-_39640756_39640756	1.69222	AAAGUGC	ENST00000331163.6|PDGFB|ENSG00000100311.12|platelet-derived growth factor beta polypeptide
hg19_v2_chr19_+_47421933_47421933	1.6868	AAAGUGC	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr3_-_50365607_50365676	1.6442	AAAGUGC	ENST00000232496.4|TUSC2|ENSG00000114383.5|tumor suppressor candidate 2
hg19_v2_chr18_+_55018044_55018044	1.6176	AAAGUGC	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr15_-_61521495_61521518	1.60522	AAAGUGC	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr6_+_170102210_170102275	1.55405	AAAGUGC	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr22_+_41697520_41697613	1.54482	AAAGUGC	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr15_-_45480153_45480171	1.5431	AAAGUGC	ENST00000560471.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F 	ENST00000560540.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr2_+_46844290_46844384	1.53844	AAAGUGC	ENST00000238892.3|CRIPT|ENSG00000119878.5|cysteine-rich PDZ-binding protein
hg19_v2_chr2_-_85555385_85555548	1.52367	AAAGUGC	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr10_+_20105157_20105184	1.38551	AAAGUGC	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr1_-_9189229_9189259	1.38404	AAAGUGC	ENST00000377411.4|GPR157|ENSG00000180758.10|G protein-coupled receptor 157
hg19_v2_chr17_-_5389477_5389537	1.37211	AAAGUGC	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr1_-_193155729_193155784	1.35847	AAAGUGC	ENST00000367434.4|B3GALT2|ENSG00000162630.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg19_v2_chr6_+_16238786_16238854	1.34415	AAAGUGC	ENST00000259727.4|GMPR|ENSG00000137198.5|guanosine monophosphate reductase
hg19_v2_chr8_-_38239732_38239796	1.34323	AAAGUGC	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr2_+_157291953_157292003	1.33763	AAAGUGC	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr9_-_124989804_124989865	1.33084	AAAGUGC	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr11_+_48002076_48002132	1.31428	AAAGUGC	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr4_-_170924888_170924950	1.30596	AAAGUGC	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr6_-_97285336_97285378	1.30011	AAAGUGC	ENST00000229955.3|GPR63|ENSG00000112218.7|G protein-coupled receptor 63 	ENST00000417980.1|GPR63|ENSG00000112218.7|G protein-coupled receptor 63
hg19_v2_chr4_-_89744457_89744512	1.24617	AAAGUGC	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr2_+_103236004_103236166	1.24047	AAAGUGC	ENST00000233969.2|SLC9A2|ENSG00000115616.2|solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
hg19_v2_chr5_-_132948216_132948255	1.22141	AAAGUGC	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chrX_-_83442915_83442985	1.21742	AAAGUGC	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr18_-_64271363_64271390	1.187	AAAGUGC	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr3_+_149530469_149530557	1.16259	AAAGUGC	ENST00000392894.3|RNF13|ENSG00000082996.15|ring finger protein 13 	ENST00000344229.3|RNF13|ENSG00000082996.15|ring finger protein 13
hg19_v2_chr15_+_91411810_91411828	1.15408	AAAGUGC	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr11_+_32851487_32851496	1.12924	AAAGUGC	ENST00000257836.3|PRRG4|ENSG00000135378.3|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg19_v2_chr8_+_1772132_1772181	1.12811	AAAGUGC	ENST00000349830.3|ARHGEF10|ENSG00000104728.11|Rho guanine nucleotide exchange factor (GEF) 10 	ENST00000520359.1|ARHGEF10|ENSG00000104728.11|Rho guanine nucleotide exchange factor (GEF) 10 	ENST00000518288.1|ARHGEF10|ENSG00000104728.11|Rho guanine nucleotide exchange factor (GEF) 10 	ENST00000398560.1|ARHGEF10|ENSG00000104728.11|Rho guanine nucleotide exchange factor (GEF) 10
hg19_v2_chr3_-_192445289_192445395	1.12236	AAAGUGC	ENST00000430714.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000418610.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000448795.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000445105.2|FGF12|ENSG00000114279.9|fibroblast growth factor 12
hg19_v2_chr1_+_25870070_25870081	1.12106	AAAGUGC	ENST00000374338.4|LDLRAP1|ENSG00000157978.7|low density lipoprotein receptor adaptor protein 1
hg19_v2_chr6_+_33378738_33378838	1.09427	AAAGUGC	ENST00000374512.3|PHF1|ENSG00000112511.13|PHD finger protein 1 	ENST00000374516.3|PHF1|ENSG00000112511.13|PHD finger protein 1
hg19_v2_chr12_+_3186521_3186575	1.06702	AAAGUGC	ENST00000537971.1|TSPAN9|ENSG00000011105.7|tetraspanin 9 	ENST00000011898.5|TSPAN9|ENSG00000011105.7|tetraspanin 9
hg19_v2_chr12_+_48166978_48167047	1.04238	AAAGUGC	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr19_+_3359561_3359681	1.03149	AAAGUGC	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr10_+_11206925_11206993	0.970116	AAAGUGC	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr1_-_57889687_57889754	0.969215	AAAGUGC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr2_+_228029281_228029330	0.925441	AAAGUGC	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr8_+_104831472_104831510	0.925416	AAAGUGC	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr7_-_98741642_98741713	0.919827	AAAGUGC	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr9_-_16870704_16870841	0.916185	AAAGUGC	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr3_-_138665969_138665993	0.914926	AAAGUGC	ENST00000330315.3|FOXL2|ENSG00000183770.5|forkhead box L2
hg19_v2_chr17_-_58469474_58469511	0.903302	AAAGUGC	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr20_+_30865429_30865480	0.893585	AAAGUGC	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr14_+_23842018_23842070	0.873295	AAAGUGC	ENST00000397242.2|IL25|ENSG00000166090.8|interleukin 25 	ENST00000329715.2|IL25|ENSG00000166090.8|interleukin 25
hg19_v2_chr8_+_17354587_17354610	0.845141	AAAGUGC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr6_+_134210243_134210276	0.832627	AAAGUGC	ENST00000367882.4|TCF21|ENSG00000118526.6|transcription factor 21
hg19_v2_chr1_+_236305826_236305877	0.829565	AAAGUGC	ENST00000366592.3|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B 	ENST00000366591.4|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B
hg19_v2_chr1_-_55680762_55680786	0.829542	AAAGUGC	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr5_+_175875349_175875361	0.821216	AAAGUGC	ENST00000261942.6|FAF2|ENSG00000113194.8|Fas associated factor family member 2
hg19_v2_chr13_+_49550015_49550070	0.812636	AAAGUGC	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr3_-_155572164_155572236	0.799192	AAAGUGC	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr3_-_179754706_179754732	0.792885	AAAGUGC	ENST00000465751.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like 	ENST00000467460.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr21_+_43823983_43824052	0.757265	AAAGUGC	ENST00000291535.6|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000450356.1|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000319294.6|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000398367.1|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A
hg19_v2_chr3_+_57261743_57261824	0.743911	AAAGUGC	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr2_+_85360499_85360598	0.732743	AAAGUGC	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr21_+_35445827_35445886	0.721045	AAAGUGC	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr20_+_6748311_6748352	0.71962	AAAGUGC	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr17_+_26662730_26662844	0.672764	AAAGUGC	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr11_-_82782861_82782949	0.659318	AAAGUGC	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr13_-_52027134_52027343	0.639819	AAAGUGC	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr11_+_64126614_64126665	0.632447	AAAGUGC	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr3_+_137906109_137906153	0.627572	AAAGUGC	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr17_-_31204124_31204200	0.62722	AAAGUGC	ENST00000579584.1|MYO1D|ENSG00000176658.12|myosin ID 	ENST00000318217.5|MYO1D|ENSG00000176658.12|myosin ID 	ENST00000583621.1|MYO1D|ENSG00000176658.12|myosin ID
hg19_v2_chr1_-_44497024_44497068	0.623766	AAAGUGC	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr1_-_205601064_205601090	0.618409	AAAGUGC	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr6_-_94129244_94129284	0.610497	AAAGUGC	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr5_-_114880533_114880591	0.595825	AAAGUGC	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr16_-_84150492_84150558	0.585106	AAAGUGC	ENST00000343411.3|MBTPS1|ENSG00000140943.12|membrane-bound transcription factor peptidase, site 1
hg19_v2_chr12_+_52306113_52306194	0.583755	AAAGUGC	ENST00000547400.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000550683.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000419526.2|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1
hg19_v2_chr9_-_73736511_73736546	0.553731	AAAGUGC	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr3_-_164913777_164913790	0.549226	AAAGUGC	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr5_+_142149955_142150000	0.548613	AAAGUGC	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr5_+_140201183_140201361	0.546651	AAAGUGC	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr4_-_41216619_41216637	0.543315	AAAGUGC	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr1_-_243418344_243418356	0.537018	AAAGUGC	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr3_+_190231840_190231888	0.533755	AAAGUGC	ENST00000072516.3|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000443369.2|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000412504.2|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000439062.1|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000447382.1|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000422625.1|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein 	ENST00000422485.1|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein
hg19_v2_chr11_-_67980744_67980882	0.516335	AAAGUGC	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr8_-_74791051_74791145	0.512518	AAAGUGC	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr2_+_182321925_182321952	0.49288	AAAGUGC	ENST00000339307.4|ITGA4|ENSG00000115232.9|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 	ENST00000397033.2|ITGA4|ENSG00000115232.9|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
hg19_v2_chr5_-_168006591_168006638	0.489052	AAAGUGC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr6_+_35310312_35310359	0.48225	AAAGUGC	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr19_+_14017003_14017049	0.481056	AAAGUGC	ENST00000318003.7|CC2D1A|ENSG00000132024.13|coiled-coil and C2 domain containing 1A
hg19_v2_chr1_-_205180664_205180727	0.470743	AAAGUGC	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr8_+_107670064_107670132	0.44396	AAAGUGC	ENST00000312046.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr4_+_126237554_126237554	0.409954	AAAGUGC	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr1_+_20208870_20209006	0.393134	AAAGUGC	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr3_-_178984759_178984790	0.384408	AAAGUGC	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr15_+_66994561_66994597	0.356684	AAAGUGC	ENST00000288840.5|SMAD6|ENSG00000137834.10|SMAD family member 6
hg19_v2_chr9_+_4679555_4679617	0.347925	AAAGUGC	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr12_+_52345448_52345532	0.335377	AAAGUGC	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr18_+_55711575_55711628	0.317994	AAAGUGC	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr1_+_202091980_202091991	0.286661	AAAGUGC	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr11_-_47788847_47788919	0.279744	AAAGUGC	ENST00000263773.5|FNBP4|ENSG00000109920.8|formin binding protein 4
hg19_v2_chr16_-_66785699_66785759	0.262959	AAAGUGC	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr18_+_48086440_48086512	0.252778	AAAGUGC	ENST00000400384.2|MAPK4|ENSG00000141639.7|mitogen-activated protein kinase 4 	ENST00000540640.1|MAPK4|ENSG00000141639.7|mitogen-activated protein kinase 4 	ENST00000592595.1|MAPK4|ENSG00000141639.7|mitogen-activated protein kinase 4
hg19_v2_chr6_+_110501344_110501412	0.245917	AAAGUGC	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr2_+_192542850_192542872	0.230069	AAAGUGC	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr5_+_140174429_140174550	0.214494	AAAGUGC	ENST00000520672.2|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000378132.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000526136.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2
hg19_v2_chr19_+_30433110_30433214	0.190734	AAAGUGC	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr11_-_18343669_18343721	0.145241	AAAGUGC	ENST00000396253.3|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5 	ENST00000349215.3|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5 	ENST00000438420.2|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5
hg19_v2_chr16_+_84682108_84682218	0.135783	AAAGUGC	ENST00000564996.1|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000258157.5|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000567410.1|KLHL36|ENSG00000135686.8|kelch-like family member 36
hg19_v2_chr12_+_862089_862343	0.128261	AAAGUGC	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr10_+_1095416_1095482	0.0912908	AAAGUGC	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr4_+_154387480_154387536	0.0797283	AAAGUGC	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr3_-_69435224_69435280	0.0658398	AAAGUGC	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr9_+_77112244_77112281	0.0614014	AAAGUGC	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr21_-_28338732_28338832	0.0568468	AAAGUGC	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr2_-_68479614_68479685	0.0165372	AAAGUGC	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr19_+_4402659_4402714	0.0103326	AAAGUGC	ENST00000301280.5|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150) 	ENST00000585854.1|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150)
