hg19_v2_chr5_-_98262240_98262240	6.14698	AACAGUC	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr13_-_77900814_77900935	5.20195	AACAGUC	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr6_+_111195973_111195994	4.37344	AACAGUC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr8_-_103876965_103877012	4.27655	AACAGUC	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr12_-_498620_498693	4.03775	AACAGUC	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr12_-_76953284_76953341	4.02498	AACAGUC	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr5_-_111093406_111093458	3.99427	AACAGUC	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr10_+_89622870_89622870	3.58966	AACAGUC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr1_-_245027833_245027855	3.35395	AACAGUC	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr3_+_180630090_180630311	3.25597	AACAGUC	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr2_+_85198216_85198305	3.2544	AACAGUC	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr6_+_21593972_21594071	3.16298	AACAGUC	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr14_-_90085458_90085557	3.05061	AACAGUC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr3_+_9439400_9439414	2.87361	AACAGUC	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr5_+_86564739_86564791	2.81129	AACAGUC	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr3_+_152879985_152880038	2.71349	AACAGUC	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr12_+_70636765_70636817	2.62975	AACAGUC	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr17_+_61699766_61699826	2.57067	AACAGUC	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr3_+_107241783_107241850	2.44269	AACAGUC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr9_-_116172617_116172667	2.36076	AACAGUC	ENST00000374169.3|POLE3|ENSG00000148229.8|polymerase (DNA directed), epsilon 3, accessory subunit
hg19_v2_chr6_+_108881012_108881038	2.3384	AACAGUC	ENST00000343882.6|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chrX_+_40944871_40944888	2.16573	AACAGUC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr11_+_34073195_34073266	2.08573	AACAGUC	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr9_-_139372141_139372141	2.08179	AACAGUC	ENST00000313050.7|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr16_-_47007545_47007699	2.07367	AACAGUC	ENST00000317089.5|DNAJA2|ENSG00000069345.7|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v2_chr1_+_36348790_36348822	2.05925	AACAGUC	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr10_+_93683519_93683594	2.05819	AACAGUC	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr1_+_244214577_244214593	1.98184	AACAGUC	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr4_-_100871506_100871545	1.97062	AACAGUC	ENST00000296417.5|H2AFZ|ENSG00000164032.7|H2A histone family, member Z
hg19_v2_chr1_-_235491462_235491534	1.96672	AACAGUC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr15_-_69113218_69113250	1.94842	AACAGUC	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr14_-_64010046_64010107	1.93694	AACAGUC	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr1_+_206557366_206557368	1.91411	AACAGUC	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr14_-_58894332_58894380	1.90542	AACAGUC	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr1_+_26798955_26799010	1.78487	AACAGUC	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr1_+_39456895_39456986	1.77316	AACAGUC	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr12_+_68042495_68042508	1.76243	AACAGUC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr6_-_16761678_16761721	1.70324	AACAGUC	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr13_+_114238997_114239077	1.67166	AACAGUC	ENST00000538138.1|TFDP1|ENSG00000198176.8|transcription factor Dp-1 	ENST00000375370.5|TFDP1|ENSG00000198176.8|transcription factor Dp-1
hg19_v2_chr5_+_61602055_61602083	1.66072	AACAGUC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr15_-_59225844_59225855	1.64135	AACAGUC	ENST00000380516.2|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr2_+_48010221_48010307	1.60017	AACAGUC	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr18_-_74207146_74207183	1.53117	AACAGUC	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr2_-_208030647_208030689	1.46939	AACAGUC	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr5_+_42423872_42424026	1.46712	AACAGUC	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chr6_+_13615554_13615601	1.42408	AACAGUC	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr7_+_12250886_12250933	1.37895	AACAGUC	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr12_-_117628333_117628339	1.3147	AACAGUC	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr12_+_65563329_65563373	1.312	AACAGUC	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr2_+_12857015_12857041	1.27416	AACAGUC	ENST00000155926.4|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr6_-_111136513_111136525	1.26376	AACAGUC	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr12_+_66217911_66218018	1.2353	AACAGUC	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr12_-_31945172_31945178	1.21362	AACAGUC	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr18_-_45456930_45456970	1.1713	AACAGUC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr4_-_1714037_1714071	1.14773	AACAGUC	ENST00000488267.1|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000429429.2|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000480936.1|SLBP|ENSG00000163950.8|stem-loop binding protein
hg19_v2_chr12_+_62654119_62654142	1.14138	AACAGUC	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr4_-_102268628_102268693	1.09556	AACAGUC	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr2_-_200322723_200322819	1.08904	AACAGUC	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr1_-_200992827_200992867	1.08463	AACAGUC	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr15_+_50716576_50716624	1.06828	AACAGUC	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr11_-_47198380_47198448	1.05846	AACAGUC	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr18_-_18691739_18691812	1.05661	AACAGUC	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr5_-_131826457_131826514	1.05516	AACAGUC	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr7_-_26904317_26904362	1.05059	AACAGUC	ENST00000345317.2|SKAP2|ENSG00000005020.8|src kinase associated phosphoprotein 2
hg19_v2_chr14_-_54908043_54908149	1.04082	AACAGUC	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr1_+_27022485_27022543	0.99473	AACAGUC	ENST00000324856.7|ARID1A|ENSG00000117713.13|AT rich interactive domain 1A (SWI-like)
hg19_v2_chr1_-_53018654_53018777	0.983593	AACAGUC	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr14_-_21905395_21905419	0.972123	AACAGUC	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr8_+_38614807_38614851	0.971358	AACAGUC	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr20_+_57226284_57226345	0.961032	AACAGUC	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr6_+_84569359_84569445	0.95655	AACAGUC	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chr3_+_69812877_69812962	0.947472	AACAGUC	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr17_-_65362678_65362743	0.941753	AACAGUC	ENST00000357146.4|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENST00000356126.3|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
hg19_v2_chr7_+_114562172_114562243	0.940494	AACAGUC	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr4_-_71705590_71705662	0.917237	AACAGUC	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr3_+_186501336_186501386	0.900239	AACAGUC	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr8_-_28243934_28243993	0.881072	AACAGUC	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr6_+_42749759_42749780	0.860929	AACAGUC	ENST00000314073.5|GLTSCR1L|ENSG00000112624.8|GLTSCR1-like
hg19_v2_chr2_-_39348137_39348212	0.845854	AACAGUC	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr2_-_26101374_26101389	0.791416	AACAGUC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr17_+_30677136_30677205	0.777683	AACAGUC	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr19_-_29704448_29704448	0.777105	AACAGUC	ENST00000304863.4|UQCRFS1|ENSG00000169021.4|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
hg19_v2_chr5_+_50678921_50678921	0.775833	AACAGUC	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chr9_+_128024067_128024190	0.747208	AACAGUC	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr6_+_43445261_43445336	0.723324	AACAGUC	ENST00000372444.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372445.5|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000436109.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372454.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000442878.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000259751.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372452.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372449.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral)
hg19_v2_chr17_-_73775839_73775868	0.691992	AACAGUC	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr10_-_15210666_15210707	0.689169	AACAGUC	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr1_+_27153173_27153230	0.687778	AACAGUC	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr22_-_37099555_37099603	0.684558	AACAGUC	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr1_+_222791417_222791455	0.683517	AACAGUC	ENST00000344922.5|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344441.6|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344507.1|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr2_-_40679186_40679297	0.6819	AACAGUC	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr10_+_11206925_11206993	0.678732	AACAGUC	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr6_+_110501344_110501412	0.673351	AACAGUC	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr1_-_23670817_23670829	0.650697	AACAGUC	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr22_+_35653445_35653501	0.647971	AACAGUC	ENST00000420166.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000444518.2|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000455359.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000216106.5|HMGXB4|ENSG00000100281.9|HMG box domain containing 4
hg19_v2_chr10_-_13390270_13390316	0.619961	AACAGUC	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr7_-_155604967_155605105	0.613081	AACAGUC	ENST00000297261.2|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr14_+_39644387_39644417	0.611556	AACAGUC	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr18_+_9913977_9914088	0.602312	AACAGUC	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr16_-_20911641_20911720	0.589743	AACAGUC	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr1_-_154842741_154842772	0.555284	AACAGUC	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr12_+_104850740_104850768	0.547926	AACAGUC	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr1_-_38325256_38325292	0.540758	AACAGUC	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr3_-_13009168_13009236	0.539661	AACAGUC	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr5_-_139726181_139726216	0.513912	AACAGUC	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr20_-_7921090_7921121	0.511181	AACAGUC	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr3_-_119813264_119813272	0.511046	AACAGUC	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr5_+_153825510_153825529	0.503629	AACAGUC	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr14_+_102228123_102228237	0.491156	AACAGUC	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr2_+_32288725_32288776	0.465646	AACAGUC	ENST00000315285.3|SPAST|ENSG00000021574.7|spastin
hg19_v2_chr20_-_34252759_34252843	0.457408	AACAGUC	ENST00000414711.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000416778.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000397442.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000440240.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000412056.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000352393.4|CPNE1|ENSG00000214078.7|copine I 	ENST00000359646.1|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000458038.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000424458.1|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000420363.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000434795.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000374104.3|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000437100.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000414664.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000374114.3|RBM12|ENSG00000244462.3|RNA binding motif protein 12
hg19_v2_chr4_+_699537_699600	0.455889	AACAGUC	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr15_+_72766651_72766680	0.445424	AACAGUC	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr8_-_122653630_122653661	0.445347	AACAGUC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr2_+_166326157_166326216	0.440635	AACAGUC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr1_+_20208870_20209006	0.425995	AACAGUC	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr22_+_41487711_41487798	0.418728	AACAGUC	ENST00000263253.7|EP300|ENSG00000100393.9|E1A binding protein p300
hg19_v2_chr14_-_34931458_34931562	0.407777	AACAGUC	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr15_+_49715293_49715448	0.404778	AACAGUC	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr17_+_57784826_57784883	0.398062	AACAGUC	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr18_-_23670546_23670605	0.39021	AACAGUC	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr3_+_14166440_14166541	0.380685	AACAGUC	ENST00000306077.4|TMEM43|ENSG00000170876.7|transmembrane protein 43
hg19_v2_chr3_+_169684553_169684616	0.371552	AACAGUC	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr9_+_115983808_115983880	0.354845	AACAGUC	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr6_+_163835669_163835693	0.353701	AACAGUC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr12_-_120687948_120687971	0.350787	AACAGUC	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr15_+_41709302_41709348	0.342347	AACAGUC	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr8_+_133787586_133787673	0.322069	AACAGUC	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr11_+_119019722_119019769	0.319675	AACAGUC	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr12_+_22778009_22778112	0.30925	AACAGUC	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr2_-_27632390_27632554	0.298025	AACAGUC	ENST00000350803.4|PPM1G|ENSG00000115241.9|protein phosphatase, Mg2+/Mn2+ dependent, 1G 	ENST00000344034.4|PPM1G|ENSG00000115241.9|protein phosphatase, Mg2+/Mn2+ dependent, 1G
hg19_v2_chr20_-_60640866_60640901	0.276259	AACAGUC	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr4_+_111397216_111397250	0.255553	AACAGUC	ENST00000265162.5|ENPEP|ENSG00000138792.5|glutamyl aminopeptidase (aminopeptidase A)
hg19_v2_chr7_+_28452130_28452154	0.2522	AACAGUC	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr11_+_64009072_64009220	0.221264	AACAGUC	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr15_+_79575073_79575146	0.208962	AACAGUC	ENST00000421388.2|ANKRD34C|ENSG00000235711.3|ankyrin repeat domain 34C
hg19_v2_chr3_+_178866199_178866311	0.199615	AACAGUC	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr15_-_37390482_37390572	0.193416	AACAGUC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr13_-_72441315_72441454	0.1874	AACAGUC	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr6_-_116381918_116381977	0.185766	AACAGUC	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr1_+_215256467_215256622	0.171653	AACAGUC	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr18_-_29264669_29264717	0.165687	AACAGUC	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr8_-_41909496_41909512	0.163181	AACAGUC	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr17_-_1083078_1083294	0.160477	AACAGUC	ENST00000574266.1|ABR|ENSG00000159842.10|active BCR-related 	ENST00000302538.5|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr13_+_48877895_48877929	0.160051	AACAGUC	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chrY_+_14813160_14813160	0.157623	AACAGUC	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr3_-_15563229_15563265	0.156989	AACAGUC	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr10_+_69644404_69644427	0.152959	AACAGUC	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr4_+_144434584_144434709	0.152193	AACAGUC	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr12_-_72057638_72057749	0.151756	AACAGUC	ENST00000552037.1|ZFC3H1|ENSG00000133858.11|zinc finger, C3H1-type containing 	ENST00000378743.3|ZFC3H1|ENSG00000133858.11|zinc finger, C3H1-type containing
hg19_v2_chr2_-_151344172_151344243	0.1464	AACAGUC	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr22_+_21771656_21771693	0.135686	AACAGUC	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr10_+_114709999_114710031	0.135382	AACAGUC	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr7_-_139876812_139876860	0.12707	AACAGUC	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr17_-_48785216_48785291	0.123533	AACAGUC	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr4_+_52709229_52709345	0.120508	AACAGUC	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr21_-_28338732_28338832	0.120473	AACAGUC	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr12_-_49351303_49351334	0.107169	AACAGUC	ENST00000256682.4|ARF3|ENSG00000134287.5|ADP-ribosylation factor 3
hg19_v2_chr17_-_41277467_41277510	0.106899	AACAGUC	ENST00000494123.1|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000346315.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000309486.4|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000468300.1|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000354071.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000352993.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000471181.2|BRCA1|ENSG00000012048.15|breast cancer 1, early onset
hg19_v2_chr1_-_169863016_169863109	0.103226	AACAGUC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr9_-_74383799_74383818	0.0878018	AACAGUC	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr7_-_42971759_42971822	0.0869031	AACAGUC	ENST00000538645.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000445517.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000223321.4|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2
hg19_v2_chr10_-_101380121_101380235	0.0797663	AACAGUC	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr5_-_140998616_140998639	0.0638305	AACAGUC	ENST00000389054.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398562.2|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000389057.5|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398566.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398557.4|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000253811.6|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1
hg19_v2_chr2_+_157291953_157292003	0.0452527	AACAGUC	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr22_-_22221900_22221970	0.0443287	AACAGUC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr20_-_34025999_34026045	0.0431934	AACAGUC	ENST00000374369.3|GDF5|ENSG00000125965.4|growth differentiation factor 5
hg19_v2_chr2_-_25475120_25475180	0.0421481	AACAGUC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr2_+_176964458_176964540	0.033602	AACAGUC	ENST00000406506.2|HOXD12|ENSG00000170178.5|homeobox D12 	ENST00000404162.2|HOXD12|ENSG00000170178.5|homeobox D12
hg19_v2_chr3_+_43732362_43732408	0.0332154	AACAGUC	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chrX_+_144908928_144908928	0.0243266	AACAGUC	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr17_-_40833858_40833861	0.0227678	AACAGUC	ENST00000332438.4|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chrX_+_12156582_12156603	0.0136833	AACAGUC	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr1_-_160232197_160232284	0.0119241	AACAGUC	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr1_-_93645818_93645918	0.0112426	AACAGUC	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr3_-_122233723_122233797	0.00871446	AACAGUC	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr1_-_115300592_115300648	0.00371068	AACAGUC	ENST00000261443.5|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000534699.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000339438.6|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000529046.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000525970.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000369530.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000530886.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
