hg19_v2_chr4_-_176733897_176733906	6.92421	ALX1_ARX	ENST00000393658.2|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr6_+_34204642_34204664	5.34677	ALX1_ARX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr1_+_50569575_50569586	5.0568	ALX1_ARX	ENST00000371827.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr2_+_102413726_102413769	4.53785	ALX1_ARX	ENST00000350878.4|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr12_-_118797475_118797527	4.33832	ALX1_ARX	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chrX_+_119737806_119737835	3.94243	ALX1_ARX	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chr1_+_84630645_84630652	3.78025	ALX1_ARX	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr10_-_75226166_75226169	3.57632	ALX1_ARX	ENST00000544628.1|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr2_-_55496174_55496334	3.51311	ALX1_ARX	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr18_-_21891460_21891506	3.0139	ALX1_ARX	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr8_+_26150628_26150749	2.70674	ALX1_ARX	ENST00000523925.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000315985.7|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr1_+_206557366_206557368	2.62179	ALX1_ARX	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr1_-_21377383_21377395	2.49059	ALX1_ARX	ENST00000374935.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr3_+_138340049_138340056	2.38852	ALX1_ARX	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chrX_+_107288197_107288212	2.36125	ALX1_ARX	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr12_+_104337515_104337574	2.17599	ALX1_ARX	ENST00000550595.1|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chrX_+_107288239_107288259	2.10849	ALX1_ARX	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr3_-_33759699_33759848	2.0739	ALX1_ARX	ENST00000399362.4|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000359576.5|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000307312.7|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr5_+_145826867_145826903	1.81447	ALX1_ARX	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr8_-_102803163_102803211	1.74773	ALX1_ARX	ENST00000523645.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000520346.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000220931.6|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522448.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522951.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522252.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000519098.1|NCALD|ENSG00000104490.13|neurocalcin delta
hg19_v2_chr15_+_80733570_80733659	1.68191	ALX1_ARX	ENST00000533983.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2 	ENST00000527771.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2 	ENST00000525103.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v2_chr4_+_113568207_113568367	1.64874	ALX1_ARX	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr3_+_130569429_130569479	1.60031	ALX1_ARX	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr3_-_98241760_98241910	1.56538	ALX1_ARX	ENST00000507874.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000502299.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000508659.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000510545.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000511667.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000394185.2|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000394181.2|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000508902.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000341181.6|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000437922.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000394180.2|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr2_-_145278475_145278621	1.52034	ALX1_ARX	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr7_-_93520259_93520316	1.51117	ALX1_ARX	ENST00000222543.5|TFPI2|ENSG00000105825.7|tissue factor pathway inhibitor 2
hg19_v2_chr12_-_118628350_118628371	1.43067	ALX1_ARX	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr2_+_75873902_75873932	1.43061	ALX1_ARX	ENST00000393909.2|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19 	ENST00000358788.6|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19 	ENST00000409374.1|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19
hg19_v2_chr6_-_150067696_150067814	1.42536	ALX1_ARX	ENST00000340413.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367403.3|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr8_+_107738240_107738340	1.37907	ALX1_ARX	ENST00000449762.2|OXR1|ENSG00000164830.13|oxidation resistance 1 	ENST00000297447.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr10_+_18689637_18689742	1.3397	ALX1_ARX	ENST00000377315.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr3_-_141747439_141747452	1.32599	ALX1_ARX	ENST00000467667.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr6_-_99797522_99797572	1.31191	ALX1_ARX	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr5_-_134735568_134735584	1.23886	ALX1_ARX	ENST00000510038.1|H2AFY|ENSG00000113648.12|H2A histone family, member Y 	ENST00000304332.4|H2AFY|ENSG00000113648.12|H2A histone family, member Y
hg19_v2_chr15_+_57511609_57511664	1.22963	ALX1_ARX	ENST00000543579.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000537840.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000343827.3|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr5_+_36152091_36152114	1.21902	ALX1_ARX	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr7_-_93520191_93520216	1.20745	ALX1_ARX	ENST00000545378.1|TFPI2|ENSG00000105825.7|tissue factor pathway inhibitor 2
hg19_v2_chr6_-_134639180_134639220	1.20467	ALX1_ARX	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr3_-_141747950_141748004	1.17871	ALX1_ARX	ENST00000497579.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr4_-_100356551_100356667	1.17108	ALX1_ARX	ENST00000209665.4|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr3_-_130465604_130465682	1.11824	ALX1_ARX	ENST00000356763.3|PIK3R4|ENSG00000196455.3|phosphoinositide-3-kinase, regulatory subunit 4
hg19_v2_chr4_-_87028478_87028514	1.11418	ALX1_ARX	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr3_+_140660743_140660758	1.08782	ALX1_ARX	ENST00000453248.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr16_+_24549014_24549082	1.08612	ALX1_ARX	ENST00000564314.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6 	ENST00000567686.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6
hg19_v2_chr7_+_90338712_90338907	1.06407	ALX1_ARX	ENST00000265741.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14 	ENST00000406263.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr1_-_154600421_154600480	0.980301	ALX1_ARX	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr2_-_70529180_70529222	0.96823	ALX1_ARX	ENST00000450256.1|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A 	ENST00000037869.3|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A
hg19_v2_chr21_-_43346790_43346823	0.947064	ALX1_ARX	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr3_-_194188956_194188970	0.945296	ALX1_ARX	ENST00000256031.4|ATP13A3|ENSG00000133657.10|ATPase type 13A3 	ENST00000446356.1|ATP13A3|ENSG00000133657.10|ATPase type 13A3
hg19_v2_chr5_-_9630463_9630463	0.886844	ALX1_ARX	ENST00000382492.2|TAS2R1|ENSG00000169777.5|taste receptor, type 2, member 1
hg19_v2_chr19_-_54619006_54619055	0.868039	ALX1_ARX	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr15_-_34331243_34331429	0.848038	ALX1_ARX	ENST00000306730.3|AVEN|ENSG00000169857.3|apoptosis, caspase activation inhibitor
hg19_v2_chr15_+_44092784_44092823	0.818694	ALX1_ARX	ENST00000458412.1|HYPK|ENSG00000242028.1|huntingtin interacting protein K
hg19_v2_chr5_+_140227048_140227048	0.817907	ALX1_ARX	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr3_+_138340067_138340080	0.817086	ALX1_ARX	ENST00000479848.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr5_+_36152163_36152174	0.811404	ALX1_ARX	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr4_-_83769996_83770031	0.788857	ALX1_ARX	ENST00000511338.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr8_-_91095099_91095113	0.776848	ALX1_ARX	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr12_-_89746173_89746188	0.774503	ALX1_ARX	ENST00000308385.6|DUSP6|ENSG00000139318.7|dual specificity phosphatase 6
hg19_v2_chr3_+_140660634_140660729	0.768429	ALX1_ARX	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr8_-_122653630_122653661	0.731783	ALX1_ARX	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr4_-_143227088_143227105	0.720708	ALX1_ARX	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr1_+_244214577_244214593	0.718657	ALX1_ARX	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr10_-_112064665_112064737	0.693857	ALX1_ARX	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr9_+_42671887_42671887	0.623308	ALX1_ARX	ENST00000456520.1|CBWD7|ENSG00000215126.6|COBW domain containing 7 	ENST00000377391.3|CBWD7|ENSG00000215126.6|COBW domain containing 7
hg19_v2_chr14_-_101036119_101036131	0.623163	ALX1_ARX	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr5_+_140762268_140762467	0.617544	ALX1_ARX	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr12_+_12878829_12878871	0.614621	ALX1_ARX	ENST00000326765.6|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr6_-_41039567_41039597	0.612521	ALX1_ARX	ENST00000468811.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr3_-_47934234_47934325	0.60606	ALX1_ARX	ENST00000420772.2|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr2_-_145275228_145275464	0.592939	ALX1_ARX	ENST00000427902.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000409487.3|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000470879.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000435831.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr2_-_166930131_166930149	0.59281	ALX1_ARX	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr1_+_158978768_158978800	0.586098	ALX1_ARX	ENST00000447473.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr1_-_94147385_94147407	0.582218	ALX1_ARX	ENST00000260502.6|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr2_+_54683419_54683442	0.582046	ALX1_ARX	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr2_+_58655461_58655492	0.570137	ALX1_ARX	ENST00000429095.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000429664.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000452840.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr4_-_174320687_174320687	0.562465	ALX1_ARX	ENST00000296506.3|SCRG1|ENSG00000164106.3|stimulator of chondrogenesis 1
hg19_v2_chr13_-_47471155_47471214	0.513462	ALX1_ARX	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr7_-_14880892_14881075	0.483891	ALX1_ARX	ENST00000406247.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000399322.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000258767.5|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr3_-_164914640_164914667	0.474233	ALX1_ARX	ENST00000241274.3|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr3_-_9291063_9291136	0.43109	ALX1_ARX	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr2_+_196313239_196313256	0.421603	ALX1_ARX	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr7_-_82792215_82792246	0.405997	ALX1_ARX	ENST00000333891.9|PCLO|ENSG00000186472.15|piccolo presynaptic cytomatrix protein 	ENST00000423517.2|PCLO|ENSG00000186472.15|piccolo presynaptic cytomatrix protein
hg19_v2_chr1_+_158323755_158323779	0.357932	ALX1_ARX	ENST00000368157.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368156.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368155.3|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368154.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368160.3|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368161.3|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chr4_+_169013666_169013697	0.35036	ALX1_ARX	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr8_-_61880248_61880334	0.338507	ALX1_ARX	ENST00000525556.1|AC022182.3|ENSG00000254802.1|AC022182.3
hg19_v2_chr1_+_92632542_92632609	0.328192	ALX1_ARX	ENST00000409154.4|KIAA1107|ENSG00000069712.9|KIAA1107 	ENST00000370378.4|KIAA1107|ENSG00000069712.9|KIAA1107
hg19_v2_chr2_+_185463093_185463181	0.309804	ALX1_ARX	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr6_-_111804905_111804921	0.306163	ALX1_ARX	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr14_-_78083112_78083140	0.304114	ALX1_ARX	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr2_+_44001172_44001230	0.290191	ALX1_ARX	ENST00000260605.8|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000406852.3|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000443170.3|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000398823.2|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000605786.1|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1
hg19_v2_chr5_+_137203557_137203571	0.276279	ALX1_ARX	ENST00000515645.1|MYOT|ENSG00000120729.5|myotilin
hg19_v2_chr7_+_107224364_107224391	0.274727	ALX1_ARX	ENST00000491150.1|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr4_-_83765613_83765662	0.27318	ALX1_ARX	ENST00000503937.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr17_+_68071458_68071481	0.26833	ALX1_ARX	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chrX_+_149887090_149887149	0.266291	ALX1_ARX	ENST00000538506.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr1_+_104615595_104615645	0.257704	ALX1_ARX	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr8_-_62602327_62602408	0.257353	ALX1_ARX	ENST00000445642.3|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517847.2|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000389204.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517661.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517903.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522603.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522349.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522835.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000541428.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518306.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr17_+_68071389_68071426	0.252797	ALX1_ARX	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_-_141747459_141747507	0.232956	ALX1_ARX	ENST00000477292.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000478006.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000495310.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000486111.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr19_-_6393465_6393479	0.230639	ALX1_ARX	ENST00000394456.5|GTF2F1|ENSG00000125651.9|general transcription factor IIF, polypeptide 1, 74kDa
hg19_v2_chr2_+_161993412_161993453	0.214865	ALX1_ARX	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr9_+_135854091_135854159	0.204681	ALX1_ARX	ENST00000450530.1|GFI1B|ENSG00000165702.8|growth factor independent 1B transcription repressor 	ENST00000534944.1|GFI1B|ENSG00000165702.8|growth factor independent 1B transcription repressor
hg19_v2_chr18_-_19994830_19994830	0.200211	ALX1_ARX	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr8_+_38677850_38678065	0.188443	ALX1_ARX	ENST00000518809.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520611.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr3_+_155860751_155860786	0.18411	ALX1_ARX	ENST00000471742.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr9_-_27005686_27005695	0.169719	ALX1_ARX	ENST00000380055.5|LRRC19|ENSG00000184434.7|leucine rich repeat containing 19
hg19_v2_chr11_+_95523621_95523710	0.164686	ALX1_ARX	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr12_-_67197760_67198052	0.153432	ALX1_ARX	ENST00000539540.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000540433.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000541947.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538373.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr5_+_140743859_140743898	0.150537	ALX1_ARX	ENST00000518069.1|PCDHGA5|ENSG00000253485.1|protocadherin gamma subfamily A, 5
hg19_v2_chr3_-_124774802_124774852	0.143328	ALX1_ARX	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr11_+_120973375_120973375	0.143026	ALX1_ARX	ENST00000264037.2|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr4_-_100356291_100356446	0.139826	ALX1_ARX	ENST00000476959.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 	ENST00000482593.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr9_+_77230499_77230516	0.130641	ALX1_ARX	ENST00000396204.2|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr9_-_21202204_21202204	0.125425	ALX1_ARX	ENST00000239347.3|IFNA7|ENSG00000214042.1|interferon, alpha 7
hg19_v2_chr16_+_1728257_1728296	0.122574	ALX1_ARX	ENST00000248098.3|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000562684.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000561516.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382711.5|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000566742.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr17_-_3030875_3030875	0.118347	ALX1_ARX	ENST00000328890.2|OR1G1|ENSG00000183024.3|olfactory receptor, family 1, subfamily G, member 1
hg19_v2_chr11_-_102709441_102709441	0.114103	ALX1_ARX	ENST00000434103.1|MMP3|ENSG00000149968.7|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v2_chr4_-_143226979_143226990	0.10569	ALX1_ARX	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr3_-_157824292_157824334	0.104421	ALX1_ARX	ENST00000483851.2|SHOX2|ENSG00000168779.15|short stature homeobox 2
hg19_v2_chr1_-_110933611_110933660	0.0998068	ALX1_ARX	ENST00000472422.2|SLC16A4|ENSG00000168679.13|solute carrier family 16, member 4 	ENST00000437429.2|SLC16A4|ENSG00000168679.13|solute carrier family 16, member 4
hg19_v2_chr3_+_39424828_39424918	0.086974	ALX1_ARX	ENST00000273158.4|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38 	ENST00000431510.1|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38
hg19_v2_chr12_-_43833515_43833515	0.0821598	ALX1_ARX	ENST00000549670.1|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20 	ENST00000395541.2|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20
hg19_v2_chr1_+_183774240_183774270	0.0659859	ALX1_ARX	ENST00000360851.3|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr2_+_161993465_161993481	0.0548177	ALX1_ARX	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr18_-_52989525_52989623	0.0509594	ALX1_ARX	ENST00000457482.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr3_+_190105909_190105966	0.0440565	ALX1_ARX	ENST00000456423.1|CLDN16|ENSG00000113946.3|claudin 16
hg19_v2_chr5_-_111312622_111312634	0.0369802	ALX1_ARX	ENST00000395634.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr5_-_55412774_55412784	0.0313023	ALX1_ARX	ENST00000434982.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr2_+_101437487_101437619	0.0289928	ALX1_ARX	ENST00000427413.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2 	ENST00000542504.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr17_+_7155819_7155942	0.0269457	ALX1_ARX	ENST00000570322.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000576496.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000574841.2|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5
hg19_v2_chr6_+_26199737_26199754	0.0261318	ALX1_ARX	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr1_+_52682052_52682052	0.0256175	ALX1_ARX	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr5_+_137203465_137203480	0.00986547	ALX1_ARX	ENST00000239926.4|MYOT|ENSG00000120729.5|myotilin
hg19_v2_chr16_+_68119247_68119293	0.00692278	ALX1_ARX	ENST00000575270.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
