hg19_v2_chr6_+_111195973_111195994	19.6605	AUGGCAC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr3_+_152017181_152017229	18.4367	AUGGCAC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr5_+_65222299_65222361	18.3445	AUGGCAC	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr5_-_133561752_133561833	17.5579	AUGGCAC	ENST00000519718.1|CTD-2410N18.5|ENSG00000272772.1|S-phase kinase-associated protein 1  	ENST00000481195.1|PPP2CA|ENSG00000113575.5|protein phosphatase 2, catalytic subunit, alpha isozyme
hg19_v2_chr12_-_76953284_76953341	16.7388	AUGGCAC	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr15_+_57210818_57210930	15.7837	AUGGCAC	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr15_+_77223960_77223994	15.4645	AUGGCAC	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr8_+_6565854_6565942	15.462	AUGGCAC	ENST00000285518.6|AGPAT5|ENSG00000155189.7|1-acylglycerol-3-phosphate O-acyltransferase 5
hg19_v2_chrX_-_20284958_20285039	15.1933	AUGGCAC	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr1_-_94374946_94374994	14.6976	AUGGCAC	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr8_+_26149007_26149061	14.5722	AUGGCAC	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr2_-_161350305_161350391	14.559	AUGGCAC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr2_+_201676256_201676323	14.0818	AUGGCAC	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr8_+_48920960_48921011	13.3488	AUGGCAC	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr8_+_98656336_98656535	13.0622	AUGGCAC	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr13_-_23949671_23949702	12.817	AUGGCAC	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr13_+_76123883_76123949	12.7675	AUGGCAC	ENST00000377595.3|UCHL3|ENSG00000118939.13|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
hg19_v2_chr6_-_159239257_159239274	12.0044	AUGGCAC	ENST00000337147.7|EZR|ENSG00000092820.13|ezrin 	ENST00000392177.4|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr12_+_64798095_64798162	11.9196	AUGGCAC	ENST00000332707.5|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr3_+_130569429_130569479	11.8908	AUGGCAC	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr18_+_29671812_29671892	11.6046	AUGGCAC	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr7_+_39663061_39663082	11.5664	AUGGCAC	ENST00000005257.2|RALA|ENSG00000006451.3|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v2_chr19_+_7459998_7460046	11.3517	AUGGCAC	ENST00000319670.9|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18 	ENST00000599752.1|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v2_chr1_-_225840747_225840860	10.8961	AUGGCAC	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr15_-_52861394_52861436	10.4903	AUGGCAC	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr1_-_68299130_68299160	10.4613	AUGGCAC	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr7_-_16685422_16685448	10.2301	AUGGCAC	ENST00000306999.2|ANKMY2|ENSG00000106524.4|ankyrin repeat and MYND domain containing 2
hg19_v2_chr15_-_64673630_64673648	10.1579	AUGGCAC	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr8_-_103876965_103877012	10.1511	AUGGCAC	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr5_+_61602055_61602083	10.0284	AUGGCAC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr3_+_169940153_169940183	9.40313	AUGGCAC	ENST00000295797.4|PRKCI|ENSG00000163558.8|protein kinase C, iota
hg19_v2_chr12_-_92539614_92539673	9.092	AUGGCAC	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr1_-_1822495_1822571	8.86621	AUGGCAC	ENST00000378609.4|GNB1|ENSG00000078369.13|guanine nucleotide binding protein (G protein), beta polypeptide 1
hg19_v2_chr12_+_72148614_72148699	8.38793	AUGGCAC	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr10_+_22610124_22610188	8.2888	AUGGCAC	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr10_-_33246722_33246830	7.78411	AUGGCAC	ENST00000437302.1|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 	ENST00000396033.2|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v2_chr15_-_90645679_90645753	7.7687	AUGGCAC	ENST00000539790.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000559482.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000330062.3|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial
hg19_v2_chr5_+_151151471_151151496	7.35761	AUGGCAC	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr20_-_524455_524466	7.33039	AUGGCAC	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr5_+_68462837_68462876	7.19194	AUGGCAC	ENST00000256442.5|CCNB1|ENSG00000134057.10|cyclin B1
hg19_v2_chr8_+_41348072_41348112	7.19028	AUGGCAC	ENST00000405786.2|GOLGA7|ENSG00000147533.12|golgin A7
hg19_v2_chr4_+_88928777_88928822	7.13597	AUGGCAC	ENST00000237596.2|PKD2|ENSG00000118762.3|polycystic kidney disease 2 (autosomal dominant)
hg19_v2_chr2_+_120517174_120517207	7.02525	AUGGCAC	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr2_+_159313452_159313624	7.0055	AUGGCAC	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr7_+_69064300_69064342	6.89688	AUGGCAC	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr13_-_31736027_31736064	6.76365	AUGGCAC	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr6_+_161412759_161412846	6.49179	AUGGCAC	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr8_+_110346546_110346619	6.37656	AUGGCAC	ENST00000521662.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000521688.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000520147.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila)
hg19_v2_chr1_-_84972248_84972271	6.36516	AUGGCAC	ENST00000370645.4|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5 	ENST00000370641.3|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5
hg19_v2_chr9_-_127952032_127952098	6.1323	AUGGCAC	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr3_+_171758344_171758358	6.07727	AUGGCAC	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr5_+_133861790_133861829	5.83314	AUGGCAC	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr3_-_33481835_33481905	5.77219	AUGGCAC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr5_-_142783175_142783297	5.68987	AUGGCAC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chrX_+_41192595_41192651	5.36176	AUGGCAC	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr2_-_100106419_100106522	5.29733	AUGGCAC	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr8_+_64081118_64081131	5.18632	AUGGCAC	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr11_+_125439298_125439385	4.99098	AUGGCAC	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chr9_+_33025209_33025279	4.87078	AUGGCAC	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr14_+_105886150_105886229	4.86449	AUGGCAC	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr10_-_114206649_114206688	4.72625	AUGGCAC	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr5_-_137911049_137911133	4.5867	AUGGCAC	ENST00000297185.3|HSPA9|ENSG00000113013.8|heat shock 70kDa protein 9 (mortalin)
hg19_v2_chr4_-_187644930_187645017	4.47717	AUGGCAC	ENST00000441802.2|FAT1|ENSG00000083857.9|FAT atypical cadherin 1
hg19_v2_chr5_-_64064508_64064529	4.35494	AUGGCAC	ENST00000513458.4|SREK1IP1|ENSG00000153006.10|SREK1-interacting protein 1
hg19_v2_chr10_+_11206925_11206993	4.19929	AUGGCAC	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr3_-_149688896_149688970	4.1299	AUGGCAC	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr7_+_35840542_35840671	4.10229	AUGGCAC	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr9_-_114246635_114246676	4.09295	AUGGCAC	ENST00000338205.5|KIAA0368|ENSG00000136813.10|KIAA0368
hg19_v2_chr1_+_70671363_70671428	4.08922	AUGGCAC	ENST00000370951.1|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000370950.3|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000405432.1|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000454435.2|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11
hg19_v2_chr17_-_60142609_60142657	4.06833	AUGGCAC	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr3_-_72496035_72496069	4.01436	AUGGCAC	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr3_-_160283348_160283376	3.97766	AUGGCAC	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr3_-_100120223_100120301	3.94879	AUGGCAC	ENST00000284320.5|TOMM70A|ENSG00000154174.7|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)
hg19_v2_chr15_-_65809581_65809617	3.89581	AUGGCAC	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr10_+_114709999_114710031	3.86984	AUGGCAC	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr12_+_19282643_19282710	3.84982	AUGGCAC	ENST00000317589.4|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000355397.3|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000359180.3|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000309364.4|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000540972.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000429027.2|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr1_-_235491462_235491534	3.83809	AUGGCAC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr2_-_227664474_227664508	3.52618	AUGGCAC	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr5_+_102201430_102201478	3.4895	AUGGCAC	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr10_+_74033672_74033688	3.38805	AUGGCAC	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr15_+_64388166_64388225	3.29315	AUGGCAC	ENST00000353874.4|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000261889.5|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000559844.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000561026.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000558040.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr1_+_203595903_203595934	3.29053	AUGGCAC	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr3_+_37903432_37903475	3.19572	AUGGCAC	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr10_+_31608054_31608156	3.18724	AUGGCAC	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr16_+_85646763_85646822	3.18249	AUGGCAC	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr1_+_174769006_174769070	3.15713	AUGGCAC	ENST00000489615.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr9_+_470288_470336	3.10258	AUGGCAC	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr14_-_50999307_50999367	3.09952	AUGGCAC	ENST00000013125.4|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr2_+_231577532_231577639	3.08819	AUGGCAC	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr14_+_105331596_105331656	3.01563	AUGGCAC	ENST00000556508.1|CEP170B|ENSG00000099814.11|centrosomal protein 170B 	ENST00000414716.3|CEP170B|ENSG00000099814.11|centrosomal protein 170B 	ENST00000453495.1|CEP170B|ENSG00000099814.11|centrosomal protein 170B 	ENST00000418279.1|CEP170B|ENSG00000099814.11|centrosomal protein 170B
hg19_v2_chr12_+_67663056_67663067	2.95804	AUGGCAC	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr6_+_88182643_88182722	2.85654	AUGGCAC	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr5_-_77844974_77844994	2.85543	AUGGCAC	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr6_-_132834184_132834337	2.68786	AUGGCAC	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr2_+_106361333_106361520	2.61499	AUGGCAC	ENST00000233154.4|NCK2|ENSG00000071051.9|NCK adaptor protein 2 	ENST00000451463.2|NCK2|ENSG00000071051.9|NCK adaptor protein 2
hg19_v2_chr17_-_74733404_74733456	2.59985	AUGGCAC	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr17_-_1359443_1359553	2.58152	AUGGCAC	ENST00000574295.1|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000398970.5|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000300574.2|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog
hg19_v2_chr14_+_102228123_102228237	2.54005	AUGGCAC	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_-_115259337_115259515	2.40026	AUGGCAC	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chrX_-_110655391_110655449	2.32768	AUGGCAC	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr7_-_72936531_72936602	2.29778	AUGGCAC	ENST00000339594.4|BAZ1B|ENSG00000009954.6|bromodomain adjacent to zinc finger domain, 1B
hg19_v2_chr1_+_193091080_193091222	2.27307	AUGGCAC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr2_+_30369807_30369847	2.19699	AUGGCAC	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chrX_-_131352152_131352204	2.13462	AUGGCAC	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr10_+_22605304_22605372	2.02743	AUGGCAC	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr4_-_39640700_39640712	2.01358	AUGGCAC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr5_+_118407053_118407239	1.99228	AUGGCAC	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr8_+_26240414_26240631	1.71551	AUGGCAC	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr1_+_181452678_181452716	1.69179	AUGGCAC	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr8_-_23712312_23712328	1.67377	AUGGCAC	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr10_+_112631547_112631596	1.57154	AUGGCAC	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr14_+_55518349_55518423	1.56904	AUGGCAC	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr5_-_32174369_32174458	1.51227	AUGGCAC	ENST00000265070.6|GOLPH3|ENSG00000113384.9|golgi phosphoprotein 3 (coat-protein)
hg19_v2_chr3_+_140660634_140660729	1.51169	AUGGCAC	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr9_-_80646374_80646374	1.50618	AUGGCAC	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr15_+_63334831_63335087	1.49214	AUGGCAC	ENST00000288398.6|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000358278.3|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000560445.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000403994.3|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000357980.4|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000559556.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000559397.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000267996.7|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000560970.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha)
hg19_v2_chr4_+_170541660_170541677	1.47517	AUGGCAC	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr6_+_163835669_163835693	1.40378	AUGGCAC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr2_+_169312350_169312372	1.38363	AUGGCAC	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr3_+_186501336_186501386	1.37349	AUGGCAC	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chrX_+_12993202_12993239	1.36458	AUGGCAC	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr5_-_114961858_114961876	1.35878	AUGGCAC	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr1_-_236767779_236767836	1.27227	AUGGCAC	ENST00000366579.1|HEATR1|ENSG00000119285.6|HEAT repeat containing 1 	ENST00000366582.3|HEATR1|ENSG00000119285.6|HEAT repeat containing 1 	ENST00000366581.2|HEATR1|ENSG00000119285.6|HEAT repeat containing 1
hg19_v2_chr6_+_7107999_7108054	1.24803	AUGGCAC	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr7_+_155089486_155089599	1.18034	AUGGCAC	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr1_-_160254913_160254943	0.958398	AUGGCAC	ENST00000440949.3|PEX19|ENSG00000162735.14|peroxisomal biogenesis factor 19 	ENST00000608310.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000556710.1|DCAF8|ENSG00000258465.2|DDB1- and CUL4-associated factor 8  	ENST00000368072.5|PEX19|ENSG00000162735.14|peroxisomal biogenesis factor 19
hg19_v2_chr19_+_11466062_11466159	0.952732	AUGGCAC	ENST00000251473.5|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000591329.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000586380.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2
hg19_v2_chr4_+_148538517_148538592	0.891068	AUGGCAC	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr1_-_93257951_93257981	0.888503	AUGGCAC	ENST00000543509.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000370331.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000540033.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5
hg19_v2_chr10_-_62704005_62704045	0.82497	AUGGCAC	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr12_+_49761224_49761259	0.818219	AUGGCAC	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr10_-_104262426_104262437	0.769723	AUGGCAC	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chrX_-_15353629_15353684	0.702317	AUGGCAC	ENST00000333590.4|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A 	ENST00000428964.1|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A 	ENST00000542278.1|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A
hg19_v2_chr3_-_164913777_164913790	0.621062	AUGGCAC	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr10_-_52383644_52383743	0.607002	AUGGCAC	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr11_+_111945011_111945069	0.604687	AUGGCAC	ENST00000532163.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000280352.9|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000530104.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000526879.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000393047.3|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000525785.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57
hg19_v2_chr20_-_14318248_14318264	0.583596	AUGGCAC	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr2_-_183903133_183903210	0.506025	AUGGCAC	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr8_-_30670384_30670394	0.483237	AUGGCAC	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr3_-_150264272_150264428	0.463193	AUGGCAC	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr22_+_40573921_40573946	0.444691	AUGGCAC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr1_+_25071848_25071944	0.419722	AUGGCAC	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr5_-_168006591_168006638	0.416376	AUGGCAC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr10_-_33623564_33623603	0.414964	AUGGCAC	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr2_+_42396472_42396563	0.411442	AUGGCAC	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr7_+_138145076_138145116	0.400563	AUGGCAC	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr1_+_78470530_78470551	0.394285	AUGGCAC	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr5_-_139726181_139726216	0.384989	AUGGCAC	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr6_-_52926539_52926668	0.380902	AUGGCAC	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr1_-_24306798_24306828	0.350244	AUGGCAC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr11_+_18344106_18344143	0.320549	AUGGCAC	ENST00000534641.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000525831.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000265963.4|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa
hg19_v2_chr11_-_62572901_62572964	0.298825	AUGGCAC	ENST00000439713.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531131.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000530875.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531709.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000294172.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1
hg19_v2_chr11_-_47198380_47198448	0.272472	AUGGCAC	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr17_-_37607497_37607539	0.262897	AUGGCAC	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr13_+_22245522_22245676	0.256017	AUGGCAC	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr9_-_107690420_107690518	0.207683	AUGGCAC	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr6_+_87865262_87865339	0.185137	AUGGCAC	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr4_+_154125565_154125626	0.178346	AUGGCAC	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr12_-_7079805_7079988	0.170388	AUGGCAC	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr9_+_35161998_35162101	0.102266	AUGGCAC	ENST00000396787.1|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans) 	ENST00000378495.3|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans) 	ENST00000378496.4|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans)
hg19_v2_chr14_-_68283291_68283323	0.0842807	AUGGCAC	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr20_-_39928705_39928740	0.0636391	AUGGCAC	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr1_-_240775447_240775462	0.00247852	AUGGCAC	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
