hg19_v2_chr1_-_20812690_20812763	3.08648	CAGUCCA	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr9_-_14314066_14314075	2.06808	CAGUCCA	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr1_-_41131326_41131400	1.4453	CAGUCCA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr11_-_134281812_134281828	1.29558	CAGUCCA	ENST00000392580.1|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENST00000312527.4|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v2_chr9_+_103204553_103204560	1.19948	CAGUCCA	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr19_+_48281842_48281853	1.12139	CAGUCCA	ENST00000509570.2|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr20_-_32262165_32262269	0.976281	CAGUCCA	ENST00000606690.1|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000246190.6|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000439478.1|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000375238.4|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3
hg19_v2_chr9_-_101471479_101471522	0.966186	CAGUCCA	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr1_+_155290677_155290753	0.950852	CAGUCCA	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr1_+_201979645_201979721	0.926576	CAGUCCA	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr14_+_23775971_23776000	0.920495	CAGUCCA	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr15_+_49170083_49170111	0.898989	CAGUCCA	ENST00000530028.2|EID1|ENSG00000255302.3|EP300 interacting inhibitor of differentiation 1
hg19_v2_chr17_-_73851285_73851501	0.877251	CAGUCCA	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr2_-_55237484_55237585	0.861787	CAGUCCA	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr9_+_126773880_126773895	0.799825	CAGUCCA	ENST00000373615.4|LHX2|ENSG00000106689.6|LIM homeobox 2
hg19_v2_chrX_-_110038990_110038997	0.796028	CAGUCCA	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr7_+_69064300_69064342	0.704097	CAGUCCA	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr11_-_129062093_129062184	0.699105	CAGUCCA	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr9_+_103235365_103235419	0.682185	CAGUCCA	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr20_-_48532019_48532045	0.65665	CAGUCCA	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr2_-_131850951_131851065	0.611152	CAGUCCA	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr12_+_57943781_57943869	0.605224	CAGUCCA	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr2_-_50574856_50574892	0.600398	CAGUCCA	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr13_+_88324870_88324870	0.594264	CAGUCCA	ENST00000325089.6|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr4_+_124320665_124320702	0.57235	CAGUCCA	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr15_+_45315302_45315440	0.565895	CAGUCCA	ENST00000267814.9|SORD|ENSG00000140263.9|sorbitol dehydrogenase
hg19_v2_chr17_-_48943706_48943723	0.560171	CAGUCCA	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr17_+_2240775_2240812	0.557297	CAGUCCA	ENST00000268989.3|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2 	ENST00000426855.2|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chr17_-_8066250_8066301	0.547766	CAGUCCA	ENST00000488857.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000481878.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000498285.1|RP11-599B13.6|ENSG00000263620.1|Uncharacterized protein  	ENST00000316509.6|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2)
hg19_v2_chr5_+_92919043_92919082	0.537675	CAGUCCA	ENST00000327111.3|NR2F1|ENSG00000175745.7|nuclear receptor subfamily 2, group F, member 1
hg19_v2_chr12_-_90049828_90049847	0.504704	CAGUCCA	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr11_-_31839488_31839515	0.501331	CAGUCCA	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr11_-_35440796_35440916	0.495889	CAGUCCA	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr7_+_73242069_73242082	0.492088	CAGUCCA	ENST00000435050.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr3_-_37034702_37034795	0.491502	CAGUCCA	ENST00000322716.5|EPM2AIP1|ENSG00000178567.5|EPM2A (laforin) interacting protein 1
hg19_v2_chr1_+_244214577_244214593	0.488402	CAGUCCA	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr6_-_159421198_159421254	0.479494	CAGUCCA	ENST00000252655.1|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000297262.3|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000367069.2|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas)
hg19_v2_chr5_+_67511524_67511628	0.467323	CAGUCCA	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chrX_+_69664706_69664819	0.459058	CAGUCCA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr16_-_31147020_31147083	0.45589	CAGUCCA	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr15_+_41851211_41851232	0.425327	CAGUCCA	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr11_-_118047376_118047388	0.421648	CAGUCCA	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr14_+_65171099_65171210	0.417871	CAGUCCA	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr3_+_38495333_38495422	0.416877	CAGUCCA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr18_-_500692_500748	0.414915	CAGUCCA	ENST00000400256.3|COLEC12|ENSG00000158270.10|collectin sub-family member 12
hg19_v2_chr22_-_38851205_38851205	0.412246	CAGUCCA	ENST00000303592.3|KCNJ4|ENSG00000168135.4|potassium inwardly-rectifying channel, subfamily J, member 4
hg19_v2_chr1_-_17304771_17304825	0.400412	CAGUCCA	ENST00000375534.3|MFAP2|ENSG00000117122.9|microfibrillar-associated protein 2
hg19_v2_chr3_-_11762202_11762226	0.397924	CAGUCCA	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr17_-_41977964_41978013	0.397762	CAGUCCA	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr8_+_22224811_22224822	0.38798	CAGUCCA	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr6_+_76458909_76458934	0.371094	CAGUCCA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chrX_+_100474711_100474758	0.367792	CAGUCCA	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr8_-_30670384_30670394	0.360747	CAGUCCA	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr4_-_71705590_71705662	0.34899	CAGUCCA	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr11_-_118966167_118966182	0.343488	CAGUCCA	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr13_+_25946201_25946215	0.338508	CAGUCCA	ENST00000381655.2|ATP8A2|ENSG00000132932.12|ATPase, aminophospholipid transporter, class I, type 8A, member 2
hg19_v2_chr15_+_62853562_62853614	0.337025	CAGUCCA	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr19_-_43969796_43969813	0.318432	CAGUCCA	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr19_+_49622646_49622699	0.313665	CAGUCCA	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr15_+_89346657_89346674	0.310071	CAGUCCA	ENST00000439576.2|ACAN|ENSG00000157766.11|aggrecan
hg19_v2_chr15_+_96873921_96873946	0.309245	CAGUCCA	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr17_+_45608430_45608490	0.308918	CAGUCCA	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr12_+_54447637_54447661	0.298907	CAGUCCA	ENST00000609810.1|HOXC4|ENSG00000198353.6|homeobox C4 	ENST00000430889.2|HOXC4|ENSG00000273266.1|Homeobox protein Hox-C4
hg19_v2_chr14_+_58666824_58666902	0.289415	CAGUCCA	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr2_+_85360499_85360598	0.280083	CAGUCCA	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr17_+_38375574_38375615	0.267701	CAGUCCA	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr17_+_27055798_27055828	0.267585	CAGUCCA	ENST00000268766.6|NEK8|ENSG00000160602.9|NIMA-related kinase 8
hg19_v2_chr1_-_146644122_146644176	0.266561	CAGUCCA	ENST00000254101.3|PRKAB2|ENSG00000131791.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg19_v2_chr12_+_57984965_57985059	0.264548	CAGUCCA	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr11_-_9286921_9286937	0.258353	CAGUCCA	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chr2_-_69870835_69870853	0.257414	CAGUCCA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr3_-_79068594_79068627	0.255715	CAGUCCA	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr5_-_148930960_148931013	0.246068	CAGUCCA	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr12_+_120933904_120933923	0.243285	CAGUCCA	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr10_+_88516396_88516426	0.237872	CAGUCCA	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr19_+_8274204_8274265	0.232782	CAGUCCA	ENST00000561053.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000251363.5|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559450.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559336.1|CERS4|ENSG00000090661.7|ceramide synthase 4
hg19_v2_chr3_-_119278446_119278477	0.228061	CAGUCCA	ENST00000264246.3|CD80|ENSG00000121594.7|CD80 molecule
hg19_v2_chr12_-_71148413_71148515	0.214363	CAGUCCA	ENST00000440835.2|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000549308.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000550661.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr6_-_29527702_29527702	0.214045	CAGUCCA	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr3_+_183903811_183903996	0.205265	CAGUCCA	ENST00000429586.2|ABCF3|ENSG00000161204.7|ATP-binding cassette, sub-family F (GCN20), member 3 	ENST00000292808.5|ABCF3|ENSG00000161204.7|ATP-binding cassette, sub-family F (GCN20), member 3
hg19_v2_chr4_-_99851766_99851788	0.20072	CAGUCCA	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr1_-_115300592_115300648	0.195849	CAGUCCA	ENST00000261443.5|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000534699.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000339438.6|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000529046.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000525970.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000369530.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000530886.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
hg19_v2_chr17_+_57697216_57697235	0.1802	CAGUCCA	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr3_-_128902729_128902753	0.178484	CAGUCCA	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr19_-_46296011_46296061	0.172104	CAGUCCA	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr6_-_33168391_33168465	0.16534	CAGUCCA	ENST00000374685.4|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000413614.2|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000374680.3|RXRB|ENSG00000204231.6|retinoid X receptor, beta
hg19_v2_chr15_+_41952591_41952672	0.164612	CAGUCCA	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr3_+_169684553_169684616	0.164344	CAGUCCA	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr7_-_14029515_14029642	0.16329	CAGUCCA	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr8_+_22409193_22409215	0.158309	CAGUCCA	ENST00000240123.7|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr5_-_115910630_115910657	0.157573	CAGUCCA	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chrX_+_133507327_133507386	0.156839	CAGUCCA	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr9_+_133710453_133710453	0.147544	CAGUCCA	ENST00000318560.5|ABL1|ENSG00000097007.13|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v2_chr20_+_306221_306239	0.146597	CAGUCCA	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr11_-_45307817_45307898	0.146568	CAGUCCA	ENST00000020926.3|SYT13|ENSG00000019505.3|synaptotagmin XIII
hg19_v2_chr8_-_93115445_93115462	0.146056	CAGUCCA	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr9_+_4679555_4679617	0.136495	CAGUCCA	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr3_-_48700310_48700348	0.136197	CAGUCCA	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr6_-_111136513_111136525	0.134642	CAGUCCA	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr19_+_13049413_13049459	0.119315	CAGUCCA	ENST00000316448.5|CALR|ENSG00000179218.9|calreticulin 	ENST00000588454.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr3_-_114790179_114790222	0.111637	CAGUCCA	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_+_184020398_184020463	0.111254	CAGUCCA	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr6_-_90529418_90529528	0.108034	CAGUCCA	ENST00000439638.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000369393.3|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000428876.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast)
hg19_v2_chr1_-_150979333_150979384	0.10452	CAGUCCA	ENST00000312210.5|FAM63A|ENSG00000143409.11|family with sequence similarity 63, member A
hg19_v2_chr14_-_53258314_53258418	0.101196	CAGUCCA	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr19_+_47421933_47421933	0.0973943	CAGUCCA	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr11_+_125439298_125439385	0.0927579	CAGUCCA	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chr9_+_35749203_35749350	0.0895716	CAGUCCA	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chrX_+_48554986_48555164	0.0785488	CAGUCCA	ENST00000376687.3|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila) 	ENST00000453214.2|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila)
hg19_v2_chr1_-_153950164_153950184	0.0704416	CAGUCCA	ENST00000271843.4|JTB|ENSG00000143543.10|jumping translocation breakpoint
hg19_v2_chr13_+_42622781_42622889	0.0594783	CAGUCCA	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr21_-_36260980_36261011	0.0574593	CAGUCCA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr9_-_104145795_104145806	0.0512214	CAGUCCA	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr11_-_47198380_47198448	0.0436235	CAGUCCA	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr15_-_35047166_35047204	0.0420105	CAGUCCA	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr6_-_30524951_30524957	0.0359972	CAGUCCA	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr4_-_177713788_177713881	0.0352859	CAGUCCA	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr11_+_64126614_64126665	0.0346578	CAGUCCA	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr8_-_82395461_82395498	0.0292052	CAGUCCA	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr13_-_45915221_45915347	0.027944	CAGUCCA	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr1_-_16678914_16678989	0.0268985	CAGUCCA	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr12_+_98987369_98987503	0.0262794	CAGUCCA	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr5_+_65018017_65018088	0.0232188	CAGUCCA	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr8_+_27168988_27169021	0.0185353	CAGUCCA	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr21_+_47878757_47879024	0.0176329	CAGUCCA	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr20_+_6748311_6748352	0.0132514	CAGUCCA	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr11_-_79151695_79151710	0.0119929	CAGUCCA	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr6_-_114292449_114292474	0.00872136	CAGUCCA	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr6_-_10415470_10415508	0.00829705	CAGUCCA	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr8_+_26149007_26149061	0.000890769	CAGUCCA	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chrX_+_153639856_153639943	0.00034898	CAGUCCA	ENST00000426834.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000369790.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000454722.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000350743.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000299328.5|TAZ|ENSG00000102125.11|tafazzin 	ENST00000351413.4|TAZ|ENSG00000102125.11|tafazzin
hg19_v2_chr17_-_7120525_7120666	5.80467e-05	CAGUCCA	ENST00000447163.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000399506.2|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000302955.6|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
