hg19_v2_chr1_+_182992545_182992630	9.53518	CCAGUGU	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chrX_-_99891796_99891811	8.16175	CCAGUGU	ENST00000373020.4|TSPAN6|ENSG00000000003.10|tetraspanin 6
hg19_v2_chr7_+_116165754_116165813	8.08134	CCAGUGU	ENST00000405348.1|CAV1|ENSG00000105974.7|caveolin 1, caveolae protein, 22kDa
hg19_v2_chr8_+_104311059_104311132	7.65246	CCAGUGU	ENST00000358755.4|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000523739.1|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000540287.1|FZD6|ENSG00000164930.7|frizzled family receptor 6
hg19_v2_chr9_-_128003606_128003631	6.17059	CCAGUGU	ENST00000324460.6|HSPA5|ENSG00000044574.7|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v2_chr7_-_131241361_131241398	5.46789	CCAGUGU	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr9_+_110045537_110045572	5.22891	CCAGUGU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr7_+_100770328_100770393	5.04599	CCAGUGU	ENST00000223095.4|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 	ENST00000445463.2|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
hg19_v2_chr15_-_34394119_34394149	5.03586	CCAGUGU	ENST00000256545.4|EMC7|ENSG00000134153.5|ER membrane protein complex subunit 7
hg19_v2_chr22_-_36784035_36784063	4.91329	CCAGUGU	ENST00000216181.5|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr6_+_21593972_21594071	4.62332	CCAGUGU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr11_-_102323489_102323576	4.46508	CCAGUGU	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr9_-_127952032_127952098	4.32116	CCAGUGU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr2_-_242212227_242212301	4.1197	CCAGUGU	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr12_+_72148614_72148699	4.09767	CCAGUGU	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr12_+_104682496_104682651	4.00741	CCAGUGU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr9_-_94186131_94186174	3.98121	CCAGUGU	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr2_-_153574480_153574552	3.97302	CCAGUGU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr12_-_92539614_92539673	3.93985	CCAGUGU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr10_-_98346801_98346812	3.88035	CCAGUGU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr2_+_36582857_36583069	3.85372	CCAGUGU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr17_-_4269768_4269835	3.65376	CCAGUGU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr3_-_189838670_189838718	3.46312	CCAGUGU	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr3_+_180630090_180630311	3.35819	CCAGUGU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr17_-_46682321_46682362	3.32046	CCAGUGU	ENST00000225648.3|HOXB6|ENSG00000108511.8|homeobox B6 	ENST00000484302.2|HOXB6|ENSG00000108511.8|homeobox B6
hg19_v2_chr2_-_47168906_47168994	3.24243	CCAGUGU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr1_-_94703118_94703189	3.16781	CCAGUGU	ENST00000260526.6|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29 	ENST00000370217.3|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29
hg19_v2_chr20_-_10654639_10654694	3.15902	CCAGUGU	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr1_+_193091080_193091222	3.15579	CCAGUGU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr6_+_43737939_43737956	3.11868	CCAGUGU	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr20_+_19867150_19867175	3.03324	CCAGUGU	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr4_-_40631859_40631889	2.93031	CCAGUGU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr3_-_160283348_160283376	2.90251	CCAGUGU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr14_+_67707826_67707994	2.89721	CCAGUGU	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr14_+_20937538_20937700	2.80314	CCAGUGU	ENST00000361505.5|PNP|ENSG00000198805.7|purine nucleoside phosphorylase 	ENST00000553591.1|PNP|ENSG00000198805.7|purine nucleoside phosphorylase
hg19_v2_chr19_+_45312347_45312378	2.7113	CCAGUGU	ENST00000270233.6|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group) 	ENST00000591520.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr16_-_50402836_50402930	2.64623	CCAGUGU	ENST00000394688.3|BRD7|ENSG00000166164.11|bromodomain containing 7
hg19_v2_chr10_-_121296045_121296068	2.63477	CCAGUGU	ENST00000392865.1|RGS10|ENSG00000148908.10|regulator of G-protein signaling 10
hg19_v2_chr2_+_99953816_99953894	2.45199	CCAGUGU	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr16_-_4987065_4987156	2.43037	CCAGUGU	ENST00000590782.2|PPL|ENSG00000118898.11|periplakin 	ENST00000345988.2|PPL|ENSG00000118898.11|periplakin
hg19_v2_chr20_-_62601218_62601291	2.41584	CCAGUGU	ENST00000369888.1|ZNF512B|ENSG00000196700.3|zinc finger protein 512B
hg19_v2_chr8_+_98881268_98881382	2.35341	CCAGUGU	ENST00000254898.5|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000524308.1|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000522025.2|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr19_-_11308190_11308244	2.31593	CCAGUGU	ENST00000586659.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000592903.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000589359.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000588724.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000432929.2|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2
hg19_v2_chr22_-_37415475_37415681	2.25735	CCAGUGU	ENST00000403892.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000249042.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000438203.1|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese)
hg19_v2_chr10_-_46030841_46030846	2.25249	CCAGUGU	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr12_-_120687948_120687971	2.20754	CCAGUGU	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr11_+_34073195_34073266	2.17065	CCAGUGU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr10_+_70883908_70884003	2.1669	CCAGUGU	ENST00000263559.6|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000395098.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000546041.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000541711.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe)
hg19_v2_chr1_-_39325431_39325495	2.16601	CCAGUGU	ENST00000373001.3|RRAGC|ENSG00000116954.7|Ras-related GTP binding C
hg19_v2_chrX_-_77150985_77151090	2.15163	CCAGUGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr14_+_50359773_50359850	2.13502	CCAGUGU	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr10_+_60272814_60272900	2.13478	CCAGUGU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr8_+_70378852_70378866	2.11733	CCAGUGU	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr4_+_140222609_140222742	2.11035	CCAGUGU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr1_+_218519577_218519594	2.09376	CCAGUGU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr11_+_86748863_86748948	2.07942	CCAGUGU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr10_+_112679301_112679346	2.03876	CCAGUGU	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr1_-_84972248_84972271	2.01927	CCAGUGU	ENST00000370645.4|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5 	ENST00000370641.3|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5
hg19_v2_chr16_+_16043406_16043434	2.00879	CCAGUGU	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr11_+_63706444_63706486	1.99901	CCAGUGU	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr10_-_71930222_71930280	1.98131	CCAGUGU	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr8_+_23386305_23386318	1.97786	CCAGUGU	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr3_-_176914238_176914277	1.97582	CCAGUGU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr1_+_51701924_51702001	1.96771	CCAGUGU	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chrX_+_41192595_41192651	1.95622	CCAGUGU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr17_+_37026106_37026123	1.90437	CCAGUGU	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr11_-_57298187_57298276	1.90357	CCAGUGU	ENST00000525158.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000257245.4|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000525587.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast)
hg19_v2_chr17_+_35849937_35850006	1.86873	CCAGUGU	ENST00000394389.4|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr11_-_65381643_65381767	1.79987	CCAGUGU	ENST00000309100.3|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000529839.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000526293.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chrX_+_23801280_23801297	1.78516	CCAGUGU	ENST00000379251.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379253.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379254.1|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379270.4|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1
hg19_v2_chr3_-_195270162_195270209	1.72525	CCAGUGU	ENST00000438848.1|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2 	ENST00000328432.3|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v2_chr5_+_154320623_154320673	1.68577	CCAGUGU	ENST00000523037.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000265229.8|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000439747.3|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000522038.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22
hg19_v2_chr1_+_19970657_19970796	1.63237	CCAGUGU	ENST00000375136.3|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr12_+_102271129_102271164	1.6064	CCAGUGU	ENST00000258534.8|DRAM1|ENSG00000136048.9|DNA-damage regulated autophagy modulator 1
hg19_v2_chr5_-_176778523_176778684	1.56447	CCAGUGU	ENST00000513877.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000515209.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000514458.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000502560.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2
hg19_v2_chr5_+_179921430_179921461	1.56368	CCAGUGU	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr11_-_27528301_27528336	1.549	CCAGUGU	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr15_-_42264702_42264812	1.53637	CCAGUGU	ENST00000220325.4|EHD4|ENSG00000103966.5|EH-domain containing 4
hg19_v2_chr10_+_89264625_89264637	1.49257	CCAGUGU	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr18_-_18691739_18691812	1.45253	CCAGUGU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr9_+_131445928_131445934	1.39094	CCAGUGU	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr12_-_9102549_9102591	1.37256	CCAGUGU	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr1_-_145827015_145827103	1.37065	CCAGUGU	ENST00000534502.1|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000313835.9|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000454423.3|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chrX_-_77395186_77395203	1.33857	CCAGUGU	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr8_+_30241995_30242045	1.32837	CCAGUGU	ENST00000397323.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000339877.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000320203.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000287771.5|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr20_-_24973318_24973394	1.31977	CCAGUGU	ENST00000447138.1|APMAP|ENSG00000101474.7|adipocyte plasma membrane associated protein
hg19_v2_chr10_-_88281494_88281572	1.30504	CCAGUGU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr15_-_77363513_77363570	1.29538	CCAGUGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr21_+_40177143_40177231	1.22154	CCAGUGU	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr14_-_35099315_35099369	1.21239	CCAGUGU	ENST00000396526.3|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000396534.3|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000355110.5|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000557265.1|SNX6|ENSG00000129515.14|sorting nexin 6
hg19_v2_chr19_+_45349432_45349625	1.21035	CCAGUGU	ENST00000252485.4|PVRL2|ENSG00000130202.5|poliovirus receptor-related 2 (herpesvirus entry mediator B)
hg19_v2_chr9_-_35732362_35732392	1.16589	CCAGUGU	ENST00000314888.9|TLN1|ENSG00000137076.14|talin 1 	ENST00000540444.1|TLN1|ENSG00000137076.14|talin 1
hg19_v2_chr1_+_147400506_147400549	1.1625	CCAGUGU	ENST00000314163.7|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B 	ENST00000468618.2|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B
hg19_v2_chr3_-_156877997_156878004	1.15026	CCAGUGU	ENST00000295926.3|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr1_+_36348790_36348822	1.14889	CCAGUGU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr11_-_62414070_62414104	1.13716	CCAGUGU	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr12_+_109535373_109535414	1.13071	CCAGUGU	ENST00000242576.2|UNG|ENSG00000076248.6|uracil-DNA glycosylase
hg19_v2_chr7_+_144052381_144052509	1.12547	CCAGUGU	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr2_+_170590321_170590408	1.12047	CCAGUGU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr19_+_57874835_57874966	1.11945	CCAGUGU	ENST00000543226.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1 	ENST00000282282.3|ZNF547|ENSG00000152433.10|zinc finger protein 547 	ENST00000597658.1|AC003002.4|ENSG00000268133.1|Uncharacterized protein  	ENST00000596755.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1
hg19_v2_chr2_-_39664405_39664453	1.10829	CCAGUGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr1_+_218458625_218458660	1.08013	CCAGUGU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr13_-_36050819_36050834	1.04259	CCAGUGU	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr1_-_21671968_21672009	1.03683	CCAGUGU	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr22_-_46373004_46373016	1.03649	CCAGUGU	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr16_+_31044812_31044931	1.03418	CCAGUGU	ENST00000313843.3|STX4|ENSG00000103496.10|syntaxin 4
hg19_v2_chr2_-_183903133_183903210	1.03267	CCAGUGU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr14_-_55878538_55878576	1.00019	CCAGUGU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr8_-_13372395_13372429	0.979755	CCAGUGU	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr22_-_46933067_46933067	0.951531	CCAGUGU	ENST00000262738.3|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1 	ENST00000395964.1|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1
hg19_v2_chr17_+_4736627_4736720	0.921377	CCAGUGU	ENST00000355280.6|MINK1|ENSG00000141503.11|misshapen-like kinase 1 	ENST00000347992.7|MINK1|ENSG00000141503.11|misshapen-like kinase 1
hg19_v2_chr12_+_12870055_12870119	0.920225	CCAGUGU	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr3_-_114790179_114790222	0.916821	CCAGUGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr15_-_63674218_63674360	0.893135	CCAGUGU	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr1_+_145883868_145883868	0.871372	CCAGUGU	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr2_+_160568978_160569064	0.86567	CCAGUGU	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr22_+_30279144_30279202	0.858001	CCAGUGU	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr2_+_191273052_191273121	0.856611	CCAGUGU	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr1_+_89149905_89149995	0.854316	CCAGUGU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr17_+_55162453_55162594	0.830423	CCAGUGU	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr6_-_108395907_108395971	0.826824	CCAGUGU	ENST00000193322.3|OSTM1|ENSG00000081087.10|osteopetrosis associated transmembrane protein 1
hg19_v2_chr11_+_9685604_9685706	0.819862	CCAGUGU	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr12_-_14956396_14956474	0.78864	CCAGUGU	ENST00000535328.1|WBP11|ENSG00000084463.3|WW domain binding protein 11 	ENST00000261167.2|WBP11|ENSG00000084463.3|WW domain binding protein 11
hg19_v2_chr17_-_3749515_3749551	0.778365	CCAGUGU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr20_-_14318248_14318264	0.770814	CCAGUGU	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr4_-_23891693_23891706	0.759766	CCAGUGU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr3_-_136471204_136471249	0.731224	CCAGUGU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr17_+_28804380_28804460	0.72818	CCAGUGU	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr1_+_160313062_160313160	0.693743	CCAGUGU	ENST00000294785.5|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000368063.1|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000437169.1|NCSTN|ENSG00000162736.11|nicastrin
hg19_v2_chr17_+_45727204_45727220	0.679595	CCAGUGU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr8_-_8751068_8751158	0.668663	CCAGUGU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr17_-_62502639_62502849	0.662685	CCAGUGU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr20_-_48184638_48184694	0.652433	CCAGUGU	ENST00000244043.4|PTGIS|ENSG00000124212.5|prostaglandin I2 (prostacyclin) synthase
hg19_v2_chr14_+_75469606_75469690	0.650259	CCAGUGU	ENST00000266126.5|EIF2B2|ENSG00000119718.6|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
hg19_v2_chr17_-_56084578_56084707	0.63088	CCAGUGU	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr15_+_64680003_64680063	0.619715	CCAGUGU	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr7_+_69064300_69064342	0.602816	CCAGUGU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr9_-_36400213_36400296	0.594748	CCAGUGU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr20_+_11871371_11871428	0.586291	CCAGUGU	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr7_+_107220422_107220468	0.573208	CCAGUGU	ENST00000005259.4|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr9_+_37422663_37422743	0.537969	CCAGUGU	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chr1_+_28696111_28696130	0.529371	CCAGUGU	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr5_+_132387633_132387673	0.523225	CCAGUGU	ENST00000304858.2|HSPA4|ENSG00000170606.9|heat shock 70kDa protein 4
hg19_v2_chr19_-_11039261_11039357	0.518165	CCAGUGU	ENST00000590329.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000587943.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000585858.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586748.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586575.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000253031.2|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr2_+_70485220_70485293	0.513046	CCAGUGU	ENST00000433351.2|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1 	ENST00000264441.5|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1
hg19_v2_chr11_+_120207787_120207962	0.511291	CCAGUGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr17_-_5389477_5389537	0.508281	CCAGUGU	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr16_+_71929397_71929492	0.505223	CCAGUGU	ENST00000537613.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000424485.2|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000606369.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000329908.8|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000538850.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000541918.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000534994.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000378798.5|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000539186.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr10_+_69644404_69644427	0.496839	CCAGUGU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr9_-_107690420_107690518	0.489711	CCAGUGU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr1_+_2985760_2985775	0.485334	CCAGUGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr3_+_99357319_99357454	0.482745	CCAGUGU	ENST00000452013.1|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1 	ENST00000261037.3|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1 	ENST00000273342.4|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1
hg19_v2_chr8_-_102217796_102217960	0.482314	CCAGUGU	ENST00000519744.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000311212.4|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000521272.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000519882.1|ZNF706|ENSG00000120963.7|zinc finger protein 706
hg19_v2_chr7_-_139763521_139763521	0.47827	CCAGUGU	ENST00000263549.3|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr15_-_75871589_75871676	0.477794	CCAGUGU	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr19_+_12902289_12902310	0.475361	CCAGUGU	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr8_-_122653630_122653661	0.467457	CCAGUGU	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr19_+_34745442_34745502	0.442818	CCAGUGU	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr3_-_125094093_125094198	0.439216	CCAGUGU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr7_+_77469439_77469497	0.438416	CCAGUGU	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr16_-_30798492_30798535	0.418567	CCAGUGU	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr2_+_101436564_101436647	0.41092	CCAGUGU	ENST00000335681.5|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr11_-_34379546_34379563	0.407964	CCAGUGU	ENST00000435224.2|ABTB2|ENSG00000166016.4|ankyrin repeat and BTB (POZ) domain containing 2
hg19_v2_chr1_-_89531041_89531050	0.407648	CCAGUGU	ENST00000370473.4|GBP1|ENSG00000117228.9|guanylate binding protein 1, interferon-inducible
hg19_v2_chr12_+_64798095_64798162	0.405103	CCAGUGU	ENST00000332707.5|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr13_+_48877895_48877929	0.398497	CCAGUGU	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr1_+_100435315_100435345	0.396717	CCAGUGU	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr20_-_25566153_25566211	0.392078	CCAGUGU	ENST00000278886.6|NINL|ENSG00000101004.10|ninein-like 	ENST00000422516.1|NINL|ENSG00000101004.10|ninein-like
hg19_v2_chr3_-_119813264_119813272	0.36758	CCAGUGU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr13_-_23949671_23949702	0.351204	CCAGUGU	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr1_-_37499726_37499850	0.336804	CCAGUGU	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr21_-_28338732_28338832	0.336173	CCAGUGU	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr16_+_50099852_50099956	0.332297	CCAGUGU	ENST00000299192.7|HEATR3|ENSG00000155393.8|HEAT repeat containing 3 	ENST00000285767.4|HEATR3|ENSG00000155393.8|HEAT repeat containing 3
hg19_v2_chr17_-_79479789_79479900	0.310373	CCAGUGU	ENST00000571691.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000571721.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000573283.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000575842.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000575087.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000570382.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000331925.2|ACTG1|ENSG00000184009.5|actin, gamma 1
hg19_v2_chr21_-_34960948_34961024	0.308375	CCAGUGU	ENST00000453626.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303113.6|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000432378.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303071.5|DONSON|ENSG00000159147.13|downstream neighbor of SON
hg19_v2_chr12_+_53774423_53774658	0.255366	CCAGUGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr3_+_51575596_51575596	0.253888	CCAGUGU	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chr7_-_27196267_27196311	0.245185	CCAGUGU	ENST00000242159.3|HOXA7|ENSG00000122592.6|homeobox A7
hg19_v2_chr9_+_77112244_77112281	0.235408	CCAGUGU	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr6_+_10556215_10556240	0.234801	CCAGUGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr15_+_90544532_90544624	0.231317	CCAGUGU	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr12_-_67072714_67072925	0.219751	CCAGUGU	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr2_+_109335929_109336002	0.218221	CCAGUGU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr11_-_86666427_86666450	0.211521	CCAGUGU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr8_+_95835438_95835537	0.206833	CCAGUGU	ENST00000521860.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000519457.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000519053.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000523731.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000447247.1|INTS8|ENSG00000164941.9|integrator complex subunit 8
hg19_v2_chr12_-_122907091_122907186	0.189502	CCAGUGU	ENST00000358808.2|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000361654.4|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000539080.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000537178.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr22_-_32146106_32146141	0.189205	CCAGUGU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chr10_+_75504105_75504190	0.189202	CCAGUGU	ENST00000535742.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000546025.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000345254.4|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000540668.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000339365.2|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000411652.2|SEC24C|ENSG00000176986.10|SEC24 family member C
hg19_v2_chr10_+_97803151_97803348	0.188266	CCAGUGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr11_-_77532050_77532066	0.185236	CCAGUGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr9_+_35749203_35749350	0.182262	CCAGUGU	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr19_+_39616410_39616474	0.174056	CCAGUGU	ENST00000602004.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599470.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000321944.4|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593480.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000358301.3|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593690.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599386.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4
hg19_v2_chr1_+_159796534_159796545	0.157699	CCAGUGU	ENST00000289707.5|SLAMF8|ENSG00000158714.6|SLAM family member 8
hg19_v2_chr3_-_52713729_52713784	0.154509	CCAGUGU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr22_-_18507279_18507364	0.139594	CCAGUGU	ENST00000441493.2|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000444520.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000207726.7|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000429452.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3
hg19_v2_chr17_+_45973516_45973618	0.123899	CCAGUGU	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr17_+_685513_685621	0.108104	CCAGUGU	ENST00000304478.4|RNMTL1|ENSG00000171861.6|RNA methyltransferase like 1
hg19_v2_chr15_+_84322827_84322861	0.105841	CCAGUGU	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr7_+_7606497_7606595	0.102363	CCAGUGU	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr15_+_44119159_44119226	0.101871	CCAGUGU	ENST00000263795.6|WDR76|ENSG00000092470.7|WD repeat domain 76 	ENST00000381246.2|WDR76|ENSG00000092470.7|WD repeat domain 76 	ENST00000452115.1|WDR76|ENSG00000092470.7|WD repeat domain 76
hg19_v2_chr9_+_34990219_34990312	0.0958813	CCAGUGU	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr17_+_57697216_57697235	0.0932324	CCAGUGU	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr10_+_31608054_31608156	0.0869567	CCAGUGU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr7_-_81399438_81399514	0.0861321	CCAGUGU	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr3_+_50192537_50192563	0.0832642	CCAGUGU	ENST00000002829.3|SEMA3F|ENSG00000001617.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
hg19_v2_chr12_+_52345448_52345532	0.0676652	CCAGUGU	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr1_-_147245484_147245494	0.0633791	CCAGUGU	ENST00000271348.2|GJA5|ENSG00000143140.6|gap junction protein, alpha 5, 40kDa
hg19_v2_chr19_+_49660997_49661036	0.0519376	CCAGUGU	ENST00000598691.1|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4 	ENST00000252826.5|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr17_+_61086917_61086921	0.0461382	CCAGUGU	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr16_+_86600857_86600921	0.0454476	CCAGUGU	ENST00000320354.4|FOXC2|ENSG00000176692.4|forkhead box C2 (MFH-1, mesenchyme forkhead 1)
hg19_v2_chr2_-_11606275_11606289	0.036008	CCAGUGU	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr7_-_105517021_105517050	0.0331135	CCAGUGU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_+_36396677_36396749	0.0192818	CCAGUGU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
