hg19_v2_chr1_+_182992545_182992630	10.9971	CCUUCAU	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr20_+_11871371_11871428	10.0968	CCUUCAU	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr12_+_56473628_56473680	8.07847	CCUUCAU	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr5_+_167718604_167718746	7.93575	CCUUCAU	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chr7_-_10979750_10979883	7.76021	CCUUCAU	ENST00000339600.5|NDUFA4|ENSG00000189043.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
hg19_v2_chr6_+_114178512_114178586	7.52982	CCUUCAU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr1_-_63988846_63988908	7.43305	CCUUCAU	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chr11_-_115375107_115375283	6.869	CCUUCAU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr2_-_161350305_161350391	6.60417	CCUUCAU	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr20_-_48330377_48330441	6.14305	CCUUCAU	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chrX_-_20284958_20285039	5.7615	CCUUCAU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr3_+_150321068_150321123	5.51293	CCUUCAU	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr2_-_64881018_64881064	5.17246	CCUUCAU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr17_+_57697216_57697235	4.95709	CCUUCAU	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr2_-_200322723_200322819	4.59414	CCUUCAU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr1_+_201924619_201924652	4.54527	CCUUCAU	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr6_-_31830655_31830683	4.26709	CCUUCAU	ENST00000375631.4|NEU1|ENSG00000204386.6|sialidase 1 (lysosomal sialidase)
hg19_v2_chr17_-_46178527_46178566	4.23506	CCUUCAU	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr1_-_224033596_224033697	3.98426	CCUUCAU	ENST00000391878.2|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2 	ENST00000343537.7|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2
hg19_v2_chr11_+_9406169_9406210	3.89591	CCUUCAU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr2_-_175869936_175869954	3.86321	CCUUCAU	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr9_+_36572851_36572932	3.79041	CCUUCAU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr6_-_116381918_116381977	3.72994	CCUUCAU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr9_-_14314066_14314075	3.6174	CCUUCAU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr16_-_87525651_87525651	3.53426	CCUUCAU	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr12_+_104682496_104682651	3.36568	CCUUCAU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr10_-_98346801_98346812	3.08664	CCUUCAU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr1_+_26606608_26606619	2.90252	CCUUCAU	ENST00000319041.6|SH3BGRL3|ENSG00000142669.9|SH3 domain binding glutamic acid-rich protein like 3
hg19_v2_chrX_+_46771711_46771745	2.86301	CCUUCAU	ENST00000424392.1|PHF16|ENSG00000102221.9|jade family PHD finger 3 	ENST00000397189.1|PHF16|ENSG00000102221.9|jade family PHD finger 3
hg19_v2_chr4_+_184020398_184020463	2.77802	CCUUCAU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr16_+_4674814_4674962	2.54766	CCUUCAU	ENST00000415496.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000587747.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000399577.5|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000588994.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000586183.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr5_-_137878887_137878989	2.40668	CCUUCAU	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr5_-_1524015_1524108	2.35732	CCUUCAU	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr17_-_47492236_47492251	2.35247	CCUUCAU	ENST00000434917.2|PHB|ENSG00000167085.7|prohibitin 	ENST00000300408.3|PHB|ENSG00000167085.7|prohibitin 	ENST00000511832.1|PHB|ENSG00000167085.7|prohibitin 	ENST00000419140.2|PHB|ENSG00000167085.7|prohibitin
hg19_v2_chr1_-_120612240_120612288	2.3523	CCUUCAU	ENST00000256646.2|NOTCH2|ENSG00000134250.13|notch 2
hg19_v2_chr1_-_155211017_155211062	2.17946	CCUUCAU	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr17_+_44668035_44668100	2.16112	CCUUCAU	ENST00000398238.4|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor 	ENST00000225282.8|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr1_+_214776516_214776565	2.15776	CCUUCAU	ENST00000366955.3|CENPF|ENSG00000117724.8|centromere protein F, 350/400kDa
hg19_v2_chr3_+_141106643_141106681	2.0501	CCUUCAU	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr5_-_73937244_73937274	1.98207	CCUUCAU	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr7_+_128379346_128379447	1.89282	CCUUCAU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr11_+_71935797_71935866	1.87425	CCUUCAU	ENST00000298229.2|INPPL1|ENSG00000165458.9|inositol polyphosphate phosphatase-like 1 	ENST00000541756.1|INPPL1|ENSG00000165458.9|inositol polyphosphate phosphatase-like 1
hg19_v2_chr17_+_15902694_15902801	1.8417	CCUUCAU	ENST00000261647.5|TTC19|ENSG00000011295.11|tetratricopeptide repeat domain 19 	ENST00000486880.2|TTC19|ENSG00000011295.11|tetratricopeptide repeat domain 19
hg19_v2_chr10_+_28966271_28966437	1.79979	CCUUCAU	ENST00000375533.3|BAMBI|ENSG00000095739.7|BMP and activin membrane-bound inhibitor
hg19_v2_chr6_+_43737939_43737956	1.79007	CCUUCAU	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr3_+_179370517_179370543	1.77037	CCUUCAU	ENST00000263966.3|USP13|ENSG00000058056.4|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg19_v2_chr17_+_40118759_40118772	1.73816	CCUUCAU	ENST00000393892.3|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr13_+_100153665_100153688	1.67964	CCUUCAU	ENST00000376387.4|TM9SF2|ENSG00000125304.8|transmembrane 9 superfamily member 2
hg19_v2_chr12_-_93835665_93835750	1.62852	CCUUCAU	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr12_+_22778009_22778112	1.62694	CCUUCAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr11_+_101981169_101981210	1.611	CCUUCAU	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr2_+_204192942_204193038	1.51062	CCUUCAU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr3_+_61547585_61547585	1.45987	CCUUCAU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr4_+_77870856_77870919	1.45846	CCUUCAU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr6_-_52441713_52441784	1.45353	CCUUCAU	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr10_+_60272814_60272900	1.45132	CCUUCAU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr4_-_40631859_40631889	1.4479	CCUUCAU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr18_-_29264669_29264717	1.40833	CCUUCAU	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr2_-_85788605_85788632	1.40637	CCUUCAU	ENST00000233838.4|GGCX|ENSG00000115486.7|gamma-glutamyl carboxylase
hg19_v2_chr5_+_115420688_115420751	1.36384	CCUUCAU	ENST00000274458.4|COMMD10|ENSG00000145781.4|COMM domain containing 10
hg19_v2_chr12_+_96588143_96588185	1.33633	CCUUCAU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr4_-_99851766_99851788	1.2973	CCUUCAU	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr1_+_93913713_93913839	1.27544	CCUUCAU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr9_+_33025209_33025279	1.24513	CCUUCAU	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr4_+_146402925_146402957	1.19504	CCUUCAU	ENST00000302085.4|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr20_-_1447467_1447501	1.16686	CCUUCAU	ENST00000353088.2|NSFL1C|ENSG00000088833.13|NSFL1 (p97) cofactor (p47) 	ENST00000350991.4|NSFL1C|ENSG00000088833.13|NSFL1 (p97) cofactor (p47)
hg19_v2_chr3_-_52090461_52090566	1.15314	CCUUCAU	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr17_+_45608430_45608490	1.13706	CCUUCAU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr2_-_172017343_172017391	1.13424	CCUUCAU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chrX_+_56590002_56590072	1.11143	CCUUCAU	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr13_-_31038370_31038509	1.10412	CCUUCAU	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr14_-_68141535_68141574	1.08492	CCUUCAU	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr16_-_10674528_10674555	1.07909	CCUUCAU	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr17_+_2496971_2497040	1.07623	CCUUCAU	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr6_-_159239257_159239274	1.02288	CCUUCAU	ENST00000337147.7|EZR|ENSG00000092820.13|ezrin 	ENST00000392177.4|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr4_+_75230853_75230871	1.02131	CCUUCAU	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr8_-_37756972_37757022	1.00778	CCUUCAU	ENST00000330843.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000522727.1|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000287263.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I)
hg19_v2_chr6_+_43044003_43044086	0.993253	CCUUCAU	ENST00000230419.4|PTK7|ENSG00000112655.11|protein tyrosine kinase 7 	ENST00000476760.1|PTK7|ENSG00000112655.11|protein tyrosine kinase 7 	ENST00000471863.1|PTK7|ENSG00000112655.11|protein tyrosine kinase 7 	ENST00000349241.2|PTK7|ENSG00000112655.11|protein tyrosine kinase 7 	ENST00000352931.2|PTK7|ENSG00000112655.11|protein tyrosine kinase 7 	ENST00000345201.2|PTK7|ENSG00000112655.11|protein tyrosine kinase 7
hg19_v2_chr13_+_50656307_50656405	0.984018	CCUUCAU	ENST00000378180.4|DLEU1|ENSG00000176124.7|deleted in lymphocytic leukemia 1 (non-protein coding)
hg19_v2_chr17_-_4269768_4269835	0.967809	CCUUCAU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr14_-_70883708_70883819	0.867794	CCUUCAU	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr11_-_85780086_85780161	0.855657	CCUUCAU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr1_+_10271674_10271674	0.853538	CCUUCAU	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr16_+_69599861_69599887	0.785858	CCUUCAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr6_+_88182643_88182722	0.781721	CCUUCAU	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr5_-_148930960_148931013	0.777897	CCUUCAU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr14_+_19553365_19553365	0.77603	CCUUCAU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr16_+_86544113_86544145	0.774175	CCUUCAU	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chr2_-_97535708_97535843	0.773686	CCUUCAU	ENST00000305476.5|SEMA4C|ENSG00000168758.6|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
hg19_v2_chr5_-_77844974_77844994	0.754401	CCUUCAU	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr2_+_181845298_181845378	0.751036	CCUUCAU	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr1_+_110453203_110453255	0.663456	CCUUCAU	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr12_-_63328817_63328870	0.660128	CCUUCAU	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr21_-_15755446_15755508	0.656145	CCUUCAU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr7_-_41742697_41742714	0.650178	CCUUCAU	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr14_+_90863327_90863356	0.648246	CCUUCAU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr2_-_11484710_11484812	0.623944	CCUUCAU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr2_-_131267239_131267239	0.614881	CCUUCAU	ENST00000451531.2|POTEI|ENSG00000196834.7|POTE ankyrin domain family, member I
hg19_v2_chr1_-_201438282_201438365	0.595024	CCUUCAU	ENST00000367311.3|PHLDA3|ENSG00000174307.5|pleckstrin homology-like domain, family A, member 3 	ENST00000367309.1|PHLDA3|ENSG00000174307.5|pleckstrin homology-like domain, family A, member 3
hg19_v2_chr9_-_123964114_123964210	0.563405	CCUUCAU	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr8_-_116681221_116681236	0.559872	CCUUCAU	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr14_-_20020272_20020272	0.51758	CCUUCAU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr15_+_39873268_39873294	0.490029	CCUUCAU	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr20_-_32274179_32274213	0.444002	CCUUCAU	ENST00000343380.5|E2F1|ENSG00000101412.9|E2F transcription factor 1
hg19_v2_chr4_-_185747188_185747273	0.437363	CCUUCAU	ENST00000507295.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000504900.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000281455.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000454703.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr16_+_67880574_67880635	0.435701	CCUUCAU	ENST00000219169.4|NUTF2|ENSG00000102898.7|nuclear transport factor 2
hg19_v2_chr17_+_61678225_61678260	0.43397	CCUUCAU	ENST00000258975.6|TACO1|ENSG00000136463.7|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr16_-_71843047_71843104	0.420922	CCUUCAU	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_-_37607497_37607539	0.417816	CCUUCAU	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr1_+_27022485_27022543	0.397589	CCUUCAU	ENST00000324856.7|ARID1A|ENSG00000117713.13|AT rich interactive domain 1A (SWI-like)
hg19_v2_chr3_-_125094093_125094198	0.395395	CCUUCAU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_+_109335929_109336002	0.387239	CCUUCAU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr1_-_38325256_38325292	0.377244	CCUUCAU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr10_+_97803151_97803348	0.35076	CCUUCAU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr1_-_169455169_169455241	0.347498	CCUUCAU	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr12_+_67663056_67663067	0.33698	CCUUCAU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr12_-_115121962_115121987	0.327976	CCUUCAU	ENST00000349155.2|TBX3|ENSG00000135111.10|T-box 3
hg19_v2_chr18_-_23670546_23670605	0.326764	CCUUCAU	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr2_+_208394616_208394655	0.324422	CCUUCAU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr17_-_62502639_62502849	0.319267	CCUUCAU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr8_-_68255912_68255952	0.301998	CCUUCAU	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr13_-_108518986_108519083	0.255811	CCUUCAU	ENST00000375915.2|FAM155A|ENSG00000204442.2|family with sequence similarity 155, member A
hg19_v2_chrX_-_30595959_30595986	0.250868	CCUUCAU	ENST00000378962.3|CXorf21|ENSG00000120280.5|chromosome X open reading frame 21
hg19_v2_chr10_-_121356007_121356147	0.250796	CCUUCAU	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr3_+_170136642_170136663	0.246457	CCUUCAU	ENST00000064724.3|CLDN11|ENSG00000013297.6|claudin 11 	ENST00000486975.1|CLDN11|ENSG00000013297.6|claudin 11
hg19_v2_chr15_-_49338748_49338765	0.235488	CCUUCAU	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr1_-_185286461_185286482	0.179967	CCUUCAU	ENST00000367498.3|IVNS1ABP|ENSG00000116679.11|influenza virus NS1A binding protein
hg19_v2_chrX_+_7137475_7137504	0.178731	CCUUCAU	ENST00000217961.4|STS|ENSG00000101846.6|steroid sulfatase (microsomal), isozyme S
hg19_v2_chr2_+_176987088_176987088	0.178689	CCUUCAU	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr1_+_145507587_145507633	0.160386	CCUUCAU	ENST00000330165.8|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A 	ENST00000369307.3|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A
hg19_v2_chr3_-_122233723_122233797	0.134457	CCUUCAU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr10_+_70091812_70091832	0.132996	CCUUCAU	ENST00000265866.7|HNRNPH3|ENSG00000096746.13|heterogeneous nuclear ribonucleoprotein H3 (2H9)
hg19_v2_chr1_-_24306798_24306828	0.123973	CCUUCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr17_-_36003487_36003498	0.123419	CCUUCAU	ENST00000394367.3|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 	ENST00000349699.2|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
hg19_v2_chr12_+_56915713_56915746	0.113596	CCUUCAU	ENST00000262031.5|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2 	ENST00000552247.2|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2
hg19_v2_chr9_-_112083229_112083348	0.110384	CCUUCAU	ENST00000374566.3|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B 	ENST00000374557.4|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B
hg19_v2_chr1_-_217262969_217262995	0.108727	CCUUCAU	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr20_-_36661826_36661870	0.106978	CCUUCAU	ENST00000373448.2|TTI1|ENSG00000101407.8|TELO2 interacting protein 1 	ENST00000373447.3|TTI1|ENSG00000101407.8|TELO2 interacting protein 1
hg19_v2_chr14_+_37131058_37131139	0.104281	CCUUCAU	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr20_+_34700333_34700348	0.092717	CCUUCAU	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr3_-_141868357_141868393	0.0772488	CCUUCAU	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr10_+_89622870_89622870	0.0566602	CCUUCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr4_-_39979576_39979588	0.0457346	CCUUCAU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr2_-_202316260_202316308	0.0405164	CCUUCAU	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr8_-_99837856_99837955	0.0322394	CCUUCAU	ENST00000518165.1|STK3|ENSG00000104375.11|serine/threonine kinase 3 	ENST00000419617.2|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr2_-_40679186_40679297	0.0262926	CCUUCAU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr4_-_41216619_41216637	0.0214692	CCUUCAU	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr5_+_118407053_118407239	0.0171211	CCUUCAU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr2_-_118771701_118771727	0.0170322	CCUUCAU	ENST00000376300.2|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93 	ENST00000319432.5|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93
