hg19_v2_chr3_+_153839149_153839251	24.0899	GLI3	ENST00000465093.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26 	ENST00000465817.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26
hg19_v2_chr8_-_27462822_27462856	15.3232	GLI3	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr22_+_23247030_23247061	13.7247	GLI3	ENST00000390324.2|IGLJ3|ENSG00000211678.2|immunoglobulin lambda joining 3
hg19_v2_chr19_+_35521616_35521647	13.2936	GLI3	ENST00000595652.1|SCN1B|ENSG00000105711.6|sodium channel, voltage-gated, type I, beta subunit
hg19_v2_chr8_-_27468842_27468878	13.0752	GLI3	ENST00000523500.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr19_+_45417921_45417970	12.8844	GLI3	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr11_-_111783919_111783937	12.1257	GLI3	ENST00000531198.1|CRYAB|ENSG00000109846.3|crystallin, alpha B 	ENST00000533879.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr19_+_45417812_45417869	12.0683	GLI3	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr5_-_42825983_42826007	11.3997	GLI3	ENST00000506577.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr11_-_111784005_111784071	11.3932	GLI3	ENST00000527899.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr3_+_45067659_45067675	11.3074	GLI3	ENST00000296130.4|CLEC3B|ENSG00000163815.5|C-type lectin domain family 3, member B
hg19_v2_chr1_+_6845384_6845494	11.097	GLI3	ENST00000303635.7|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr19_+_45417504_45417589	10.9709	GLI3	ENST00000588750.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000588802.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr19_+_45418067_45418126	10.5568	GLI3	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr4_-_57524061_57524074	10.3751	GLI3	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr6_-_159420780_159420872	10.1001	GLI3	ENST00000449822.1|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas)
hg19_v2_chr9_-_98079965_98080008	9.83149	GLI3	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr1_-_204380919_204380953	9.5506	GLI3	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr5_-_149792295_149792332	9.38467	GLI3	ENST00000518797.1|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000524315.1|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000009530.7|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000377795.3|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain
hg19_v2_chr9_+_139871948_139871968	9.38325	GLI3	ENST00000224167.2|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000457950.1|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371625.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371623.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain)
hg19_v2_chr10_-_90712520_90712536	9.04523	GLI3	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr3_-_15469006_15469043	8.92639	GLI3	ENST00000443029.1|METTL6|ENSG00000206562.7|methyltransferase like 6 	ENST00000383790.3|METTL6|ENSG00000206562.7|methyltransferase like 6 	ENST00000383789.5|METTL6|ENSG00000206562.7|methyltransferase like 6
hg19_v2_chr17_+_4710391_4710500	8.65197	GLI3	ENST00000263088.6|PLD2|ENSG00000129219.9|phospholipase D2 	ENST00000572940.1|PLD2|ENSG00000129219.9|phospholipase D2
hg19_v2_chr19_-_17185848_17186010	8.55404	GLI3	ENST00000593360.1|HAUS8|ENSG00000131351.10|HAUS augmin-like complex, subunit 8
hg19_v2_chr2_-_201936302_201936416	8.2991	GLI3	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr19_-_16653226_16653275	8.07403	GLI3	ENST00000198939.6|CHERP|ENSG00000085872.10|calcium homeostasis endoplasmic reticulum protein
hg19_v2_chr8_-_27468945_27468948	7.97671	GLI3	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr14_+_29236269_29236287	7.96598	GLI3	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr16_+_85061367_85061430	7.95254	GLI3	ENST00000538274.1|KIAA0513|ENSG00000135709.8|KIAA0513 	ENST00000258180.3|KIAA0513|ENSG00000135709.8|KIAA0513
hg19_v2_chr2_+_17935383_17935439	7.88122	GLI3	ENST00000524465.1|GEN1|ENSG00000178295.10|GEN1 Holliday junction 5' flap endonuclease 	ENST00000381254.2|GEN1|ENSG00000178295.10|GEN1 Holliday junction 5' flap endonuclease 	ENST00000532257.1|GEN1|ENSG00000178295.10|GEN1 Holliday junction 5' flap endonuclease
hg19_v2_chr20_+_62185491_62185539	7.78458	GLI3	ENST00000370097.1|C20orf195|ENSG00000125531.5|chromosome 20 open reading frame 195
hg19_v2_chr12_-_6798616_6798684	7.45083	GLI3	ENST00000355772.4|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000417772.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000396801.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000396799.2|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr19_+_2096868_2096922	7.40404	GLI3	ENST00000395296.1|IZUMO4|ENSG00000099840.9|IZUMO family member 4 	ENST00000395301.3|IZUMO4|ENSG00000099840.9|IZUMO family member 4
hg19_v2_chr14_+_94577074_94577161	7.38994	GLI3	ENST00000444961.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000448882.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557098.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000554800.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000556544.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000298902.5|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555819.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557634.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555744.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27
hg19_v2_chr4_+_166300084_166300094	7.27287	GLI3	ENST00000402744.4|CPE|ENSG00000109472.9|carboxypeptidase E
hg19_v2_chr2_+_17935119_17935146	7.21544	GLI3	ENST00000317402.7|GEN1|ENSG00000178295.10|GEN1 Holliday junction 5' flap endonuclease
hg19_v2_chr1_+_156123359_156123398	7.18863	GLI3	ENST00000368284.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000368286.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000438830.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr22_+_23241661_23241804	7.16878	GLI3	ENST00000390322.2|IGLJ2|ENSG00000211676.2|immunoglobulin lambda joining 2
hg19_v2_chr8_+_21916710_21916734	7.1532	GLI3	ENST00000523266.1|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000519907.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr19_-_16653325_16653358	7.04726	GLI3	ENST00000546361.2|CHERP|ENSG00000085872.10|calcium homeostasis endoplasmic reticulum protein
hg19_v2_chr3_+_10068095_10068183	6.99574	GLI3	ENST00000287647.3|FANCD2|ENSG00000144554.6|Fanconi anemia, complementation group D2 	ENST00000383807.1|FANCD2|ENSG00000144554.6|Fanconi anemia, complementation group D2 	ENST00000383806.1|FANCD2|ENSG00000144554.6|Fanconi anemia, complementation group D2 	ENST00000419585.1|FANCD2|ENSG00000144554.6|Fanconi anemia, complementation group D2
hg19_v2_chr11_-_111783595_111783651	6.98493	GLI3	ENST00000528628.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr19_+_35521572_35521588	6.8294	GLI3	ENST00000262631.5|SCN1B|ENSG00000105711.6|sodium channel, voltage-gated, type I, beta subunit
hg19_v2_chr2_-_136875712_136875735	6.8057	GLI3	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr14_+_102027688_102027833	6.76747	GLI3	ENST00000510508.4|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III 	ENST00000359323.3|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III
hg19_v2_chr11_-_12030629_12030644	6.7023	GLI3	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr8_+_21916680_21916695	6.68064	GLI3	ENST00000358242.3|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000415253.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr1_-_20834586_20834656	6.67206	GLI3	ENST00000264198.3|MUL1|ENSG00000090432.5|mitochondrial E3 ubiquitin protein ligase 1
hg19_v2_chr15_+_81591757_81591780	6.56239	GLI3	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr7_+_150498783_150498890	6.52641	GLI3	ENST00000475536.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A 	ENST00000468689.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr12_-_6798523_6798548	6.47555	GLI3	ENST00000319770.3|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr3_-_46506358_46506404	6.45613	GLI3	ENST00000417439.1|LTF|ENSG00000012223.8|lactotransferrin 	ENST00000431944.1|LTF|ENSG00000012223.8|lactotransferrin
hg19_v2_chr20_-_50808236_50808264	6.43777	GLI3	ENST00000361387.2|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr1_+_156123318_156123358	6.41959	GLI3	ENST00000368285.3|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr19_+_39897453_39897498	6.32972	GLI3	ENST00000597629.1|ZFP36|ENSG00000128016.4|ZFP36 ring finger protein 	ENST00000248673.3|ZFP36|ENSG00000128016.4|ZFP36 ring finger protein 	ENST00000594045.1|ZFP36|ENSG00000128016.4|ZFP36 ring finger protein 	ENST00000594442.1|ZFP36|ENSG00000128016.4|ZFP36 ring finger protein
hg19_v2_chr3_+_15468862_15468909	6.27759	GLI3	ENST00000396842.2|EAF1|ENSG00000144597.9|ELL associated factor 1
hg19_v2_chr1_+_36396313_36396356	6.20895	GLI3	ENST00000324350.5|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr16_+_84209539_84209585	6.16409	GLI3	ENST00000569735.1|DNAAF1|ENSG00000154099.13|dynein, axonemal, assembly factor 1
hg19_v2_chr12_-_6798410_6798503	6.15534	GLI3	ENST00000361959.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000436774.2|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000544482.1|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr7_+_150498610_150498659	6.1538	GLI3	ENST00000461345.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr15_+_84116106_84116283	6.08181	GLI3	ENST00000535412.1|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3 	ENST00000324537.5|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3
hg19_v2_chr19_+_48281842_48281853	6.05176	GLI3	ENST00000509570.2|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr12_-_45270151_45270162	6.01663	GLI3	ENST00000429094.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr20_+_36149602_36149665	5.98948	GLI3	ENST00000062104.2|NNAT|ENSG00000053438.7|neuronatin 	ENST00000346199.2|NNAT|ENSG00000053438.7|neuronatin
hg19_v2_chr12_-_13248705_13248710	5.91678	GLI3	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr17_+_17942684_17942784	5.90653	GLI3	ENST00000376345.3|GID4|ENSG00000141034.5|GID complex subunit 4
hg19_v2_chr12_-_45270077_45270143	5.88256	GLI3	ENST00000551601.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000549027.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000452445.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr17_+_17942594_17942606	5.86951	GLI3	ENST00000268719.4|GID4|ENSG00000141034.5|GID complex subunit 4
hg19_v2_chr12_-_122751002_122751068	5.85001	GLI3	ENST00000267199.4|VPS33A|ENSG00000139719.5|vacuolar protein sorting 33 homolog A (S. cerevisiae)
hg19_v2_chr21_-_45079341_45079400	5.84244	GLI3	ENST00000443485.1|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein 	ENST00000291560.2|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein
hg19_v2_chr19_-_46318561_46318577	5.69154	GLI3	ENST00000221538.3|RSPH6A|ENSG00000104941.3|radial spoke head 6 homolog A (Chlamydomonas)
hg19_v2_chr11_-_65640325_65640377	5.61853	GLI3	ENST00000307998.6|EFEMP2|ENSG00000172638.8|EGF containing fibulin-like extracellular matrix protein 2
hg19_v2_chr19_-_46318486_46318531	5.57323	GLI3	ENST00000597055.1|RSPH6A|ENSG00000104941.3|radial spoke head 6 homolog A (Chlamydomonas)
hg19_v2_chr6_-_46703069_46703081	5.47161	GLI3	ENST00000538237.1|PLA2G7|ENSG00000146070.12|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) 	ENST00000274793.7|PLA2G7|ENSG00000146070.12|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
hg19_v2_chr6_-_167040731_167040745	5.41044	GLI3	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr19_+_35629702_35629742	5.38916	GLI3	ENST00000351325.4|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr1_-_21978312_21978363	5.38099	GLI3	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr1_+_11866270_11866317	5.37793	GLI3	ENST00000376497.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000376487.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000376496.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr21_-_46330545_46330741	5.34998	GLI3	ENST00000320216.6|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000397852.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr1_-_11866034_11866115	5.22641	GLI3	ENST00000376590.3|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr3_-_127542051_127542098	5.21943	GLI3	ENST00000398104.1|MGLL|ENSG00000074416.9|monoglyceride lipase
hg19_v2_chr3_-_15140629_15140670	5.16577	GLI3	ENST00000507357.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000449050.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000253699.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000435849.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000476527.2|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20
hg19_v2_chr6_-_28367510_28367537	5.10679	GLI3	ENST00000361028.1|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr11_-_65640198_65640281	5.09741	GLI3	ENST00000528176.1|EFEMP2|ENSG00000172638.8|EGF containing fibulin-like extracellular matrix protein 2
hg19_v2_chr19_+_44084696_44084790	5.09218	GLI3	ENST00000562255.1|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing 	ENST00000569031.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr15_+_59499031_59499054	5.03288	GLI3	ENST00000307144.4|LDHAL6B|ENSG00000171989.4|lactate dehydrogenase A-like 6B
hg19_v2_chr3_+_49591881_49591940	5.01449	GLI3	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr19_+_58790314_58790358	5.01177	GLI3	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr12_+_50355647_50355661	5.0084	GLI3	ENST00000293599.6|AQP5|ENSG00000161798.6|aquaporin 5
hg19_v2_chr4_-_17812309_17812394	4.97452	GLI3	ENST00000382247.1|DCAF16|ENSG00000163257.6|DDB1 and CUL4 associated factor 16 	ENST00000536863.1|DCAF16|ENSG00000163257.6|DDB1 and CUL4 associated factor 16
hg19_v2_chr1_-_11865982_11866005	4.95825	GLI3	ENST00000418034.1|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr19_+_1103936_1104007	4.94885	GLI3	ENST00000354171.8|GPX4|ENSG00000167468.12|glutathione peroxidase 4 	ENST00000589115.1|GPX4|ENSG00000167468.12|glutathione peroxidase 4
hg19_v2_chr9_-_123476612_123476698	4.91687	GLI3	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr16_+_28834303_28834467	4.88033	GLI3	ENST00000340394.8|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000325215.6|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000395547.2|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000336783.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000382686.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000564304.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chrX_-_40506766_40506824	4.86879	GLI3	ENST00000378421.1|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000440784.2|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000327877.5|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000378426.1|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000378418.2|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38
hg19_v2_chr19_-_3869012_3869041	4.86386	GLI3	ENST00000592398.1|ZFR2|ENSG00000105278.6|zinc finger RNA binding protein 2 	ENST00000262961.4|ZFR2|ENSG00000105278.6|zinc finger RNA binding protein 2 	ENST00000439086.2|ZFR2|ENSG00000105278.6|zinc finger RNA binding protein 2
hg19_v2_chr10_-_27444143_27444195	4.85813	GLI3	ENST00000477432.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr9_-_131872928_131873088	4.85566	GLI3	ENST00000455830.2|CRAT|ENSG00000095321.12|carnitine O-acetyltransferase 	ENST00000393384.3|CRAT|ENSG00000095321.12|carnitine O-acetyltransferase 	ENST00000318080.2|CRAT|ENSG00000095321.12|carnitine O-acetyltransferase
hg19_v2_chr11_-_2160180_2160257	4.84553	GLI3	ENST00000381406.4|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr4_-_74847800_74847841	4.81799	GLI3	ENST00000296029.3|PF4|ENSG00000163737.3|platelet factor 4
hg19_v2_chr4_+_72052964_72053013	4.74065	GLI3	ENST00000264485.5|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000425175.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr12_+_10365404_10365547	4.73766	GLI3	ENST00000266458.5|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000421801.2|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000544284.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545047.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000543602.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545887.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1
hg19_v2_chr14_-_107114267_107114277	4.67937	GLI3	ENST00000454421.2|IGHV3-64|ENSG00000223648.2|immunoglobulin heavy variable 3-64
hg19_v2_chr19_-_33793430_33793470	4.64021	GLI3	ENST00000498907.2|CEBPA|ENSG00000245848.2|CCAAT/enhancer binding protein (C/EBP), alpha
hg19_v2_chr9_+_134000948_134001043	4.60574	GLI3	ENST00000359428.5|NUP214|ENSG00000126883.12|nucleoporin 214kDa 	ENST00000411637.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa 	ENST00000451030.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr9_+_34458771_34458850	4.51129	GLI3	ENST00000437363.1|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1 	ENST00000242317.4|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1
hg19_v2_chr1_+_9005917_9005946	4.49363	GLI3	ENST00000549778.1|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000480186.3|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377443.2|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377436.3|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377442.2|CA6|ENSG00000131686.10|carbonic anhydrase VI
hg19_v2_chr19_-_4454081_4454090	4.48347	GLI3	ENST00000591919.1|UBXN6|ENSG00000167671.7|UBX domain protein 6
hg19_v2_chr16_+_67381289_67381306	4.45362	GLI3	ENST00000435835.3|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36
hg19_v2_chr7_-_994302_994333	4.45089	GLI3	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr17_+_42219267_42219329	4.4251	GLI3	ENST00000319977.4|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53 	ENST00000585683.1|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr19_+_782755_782833	4.41447	GLI3	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr4_-_5894777_5894799	4.4126	GLI3	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr7_-_105029812_105029860	4.40556	GLI3	ENST00000482897.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr19_+_48281803_48281829	4.40172	GLI3	ENST00000601048.1|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr5_-_180237445_180237462	4.39113	GLI3	ENST00000393340.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr16_+_20817761_20817837	4.36788	GLI3	ENST00000568046.1|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp  	ENST00000261377.6|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp
hg19_v2_chr16_+_67381263_67381284	4.33868	GLI3	ENST00000541146.1|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36 	ENST00000563189.1|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36 	ENST00000290940.7|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36
hg19_v2_chr19_+_49999631_49999711	4.32226	GLI3	ENST00000270625.2|RPS11|ENSG00000142534.2|ribosomal protein S11 	ENST00000596873.1|RPS11|ENSG00000142534.2|ribosomal protein S11 	ENST00000594493.1|RPS11|ENSG00000142534.2|ribosomal protein S11 	ENST00000599561.1|RPS11|ENSG00000142534.2|ribosomal protein S11
hg19_v2_chr8_+_133931648_133931685	4.28286	GLI3	ENST00000519178.1|TG|ENSG00000042832.7|thyroglobulin 	ENST00000542445.1|TG|ENSG00000042832.7|thyroglobulin
hg19_v2_chr19_+_4969116_4969143	4.27151	GLI3	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr6_+_163148973_163149044	4.27037	GLI3	ENST00000366888.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr1_+_19923454_19923561	4.24796	GLI3	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr12_-_13248562_13248596	4.16844	GLI3	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr17_+_7531281_7531320	4.16446	GLI3	ENST00000575729.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000340624.5|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr12_-_10542617_10542647	4.15025	GLI3	ENST00000240618.6|KLRK1|ENSG00000213809.4|killer cell lectin-like receptor subfamily K, member 1
hg19_v2_chr1_+_11866207_11866268	4.13272	GLI3	ENST00000312413.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000346436.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr19_+_5455421_5455447	4.12076	GLI3	ENST00000222033.4|ZNRF4|ENSG00000105428.4|zinc and ring finger 4
hg19_v2_chr2_+_220379052_220379131	4.11938	GLI3	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chr17_+_42219383_42219424	4.11327	GLI3	ENST00000245382.6|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr16_+_57702099_57702202	4.1022	GLI3	ENST00000333493.4|GPR97|ENSG00000182885.12|G protein-coupled receptor 97 	ENST00000327655.6|GPR97|ENSG00000182885.12|G protein-coupled receptor 97
hg19_v2_chr11_-_116708302_116708347	4.10132	GLI3	ENST00000375320.1|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000359492.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375329.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375323.1|APOA1|ENSG00000118137.5|apolipoprotein A-I
hg19_v2_chr10_+_134145614_134145724	4.09794	GLI3	ENST00000368615.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000392638.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000344079.5|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000356571.4|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000368614.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chrX_-_48056199_48056233	4.09371	GLI3	ENST00000311798.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5 	ENST00000347757.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5
hg19_v2_chr17_-_73851285_73851501	4.08414	GLI3	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr4_+_76932326_76932370	4.06495	GLI3	ENST00000513353.1|ART3|ENSG00000156219.12|ADP-ribosyltransferase 3 	ENST00000341029.5|ART3|ENSG00000156219.12|ADP-ribosyltransferase 3
hg19_v2_chr12_-_52887034_52887049	4.05059	GLI3	ENST00000330722.6|KRT6A|ENSG00000205420.6|keratin 6A
hg19_v2_chr19_+_36208877_36208921	4.02249	GLI3	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chr14_-_60097524_60097538	3.98027	GLI3	ENST00000342503.4|RTN1|ENSG00000139970.12|reticulon 1
hg19_v2_chr17_-_1420182_1420279	3.97685	GLI3	ENST00000421807.2|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr1_-_31845914_31845931	3.97508	GLI3	ENST00000373713.2|FABP3|ENSG00000121769.3|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)
hg19_v2_chr12_-_13248732_13248744	3.96231	GLI3	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr5_+_80597419_80597448	3.962	GLI3	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr20_+_44098346_44098373	3.95301	GLI3	ENST00000372676.3|WFDC2|ENSG00000101443.13|WAP four-disulfide core domain 2
hg19_v2_chr14_-_94856987_94857000	3.94515	GLI3	ENST00000449399.3|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000404814.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr9_+_90112590_90112611	3.9178	GLI3	ENST00000472284.1|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr6_-_46703430_46703465	3.91459	GLI3	ENST00000537365.1|PLA2G7|ENSG00000146070.12|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
hg19_v2_chr19_-_19754354_19754370	3.89654	GLI3	ENST00000587238.1|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr11_+_111783450_111783475	3.88227	GLI3	ENST00000537382.1|HSPB2|ENSG00000170276.4|Homo sapiens heat shock 27kDa protein 2 (HSPB2), mRNA.
hg19_v2_chr21_-_46340884_46341048	3.87589	GLI3	ENST00000302347.5|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000517819.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr14_-_94857004_94857030	3.86981	GLI3	ENST00000557492.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000448921.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000437397.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000355814.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000393088.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr19_-_12886327_12886434	3.86863	GLI3	ENST00000397668.3|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2 	ENST00000587178.1|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2 	ENST00000264827.5|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2
hg19_v2_chr14_-_106330072_106330072	3.86696	GLI3	ENST00000488476.1|IGHJ5|ENSG00000242472.1|immunoglobulin heavy joining 5
hg19_v2_chr14_-_94856951_94856979	3.85513	GLI3	ENST00000553327.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000556955.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000557118.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000440909.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr17_+_8339189_8339285	3.85458	GLI3	ENST00000585098.1|NDEL1|ENSG00000166579.11|nudE neurodevelopment protein 1-like 1 	ENST00000380025.4|NDEL1|ENSG00000166579.11|nudE neurodevelopment protein 1-like 1 	ENST00000402554.3|NDEL1|ENSG00000166579.11|nudE neurodevelopment protein 1-like 1 	ENST00000584866.1|NDEL1|ENSG00000166579.11|nudE neurodevelopment protein 1-like 1 	ENST00000582490.1|NDEL1|ENSG00000166579.11|nudE neurodevelopment protein 1-like 1
hg19_v2_chr7_-_150974494_150974538	3.84404	GLI3	ENST00000392811.2|SMARCD3|ENSG00000082014.12|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
hg19_v2_chr20_+_42143136_42143166	3.8292	GLI3	ENST00000373134.1|L3MBTL1|ENSG00000185513.10|l(3)mbt-like 1 (Drosophila)
hg19_v2_chr1_-_229569834_229569849	3.80307	GLI3	ENST00000366684.3|ACTA1|ENSG00000143632.10|actin, alpha 1, skeletal muscle 	ENST00000366683.2|ACTA1|ENSG00000143632.10|actin, alpha 1, skeletal muscle
hg19_v2_chr3_-_169899504_169899542	3.7725	GLI3	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr3_-_53080047_53080103	3.76968	GLI3	ENST00000482396.1|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000358080.2|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000296295.6|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000394752.3|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1
hg19_v2_chr16_-_55867146_55867249	3.76812	GLI3	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr14_-_21492113_21492227	3.75219	GLI3	ENST00000554094.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr3_+_187871060_187871102	3.73983	GLI3	ENST00000448637.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr6_-_52859968_52860149	3.73907	GLI3	ENST00000370959.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr11_+_1889880_1889903	3.73128	GLI3	ENST00000405957.2|LSP1|ENSG00000130592.9|lymphocyte-specific protein 1
hg19_v2_chr11_-_2170786_2170833	3.72219	GLI3	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr20_+_44098385_44098401	3.72116	GLI3	ENST00000217425.5|WFDC2|ENSG00000101443.13|WAP four-disulfide core domain 2 	ENST00000339946.3|WFDC2|ENSG00000101443.13|WAP four-disulfide core domain 2
hg19_v2_chr3_-_127542021_127542050	3.72048	GLI3	ENST00000434178.2|MGLL|ENSG00000074416.9|monoglyceride lipase
hg19_v2_chr5_-_95297534_95297563	3.7187	GLI3	ENST00000513343.1|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2 	ENST00000431061.2|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr15_+_63569731_63569783	3.70532	GLI3	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr9_+_131218336_131218366	3.68224	GLI3	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr1_+_27114589_27114712	3.6742	GLI3	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr19_+_35630022_35630083	3.66861	GLI3	ENST00000589209.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr5_-_79551838_79551854	3.64739	GLI3	ENST00000509193.1|SERINC5|ENSG00000164300.11|serine incorporator 5 	ENST00000512972.2|SERINC5|ENSG00000164300.11|serine incorporator 5
hg19_v2_chr1_-_157108266_157108347	3.64025	GLI3	ENST00000326786.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr16_-_89556942_89557020	3.63028	GLI3	ENST00000301030.4|ANKRD11|ENSG00000167522.10|ankyrin repeat domain 11
hg19_v2_chr20_+_49348081_49348096	3.62077	GLI3	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr19_+_18208603_18208614	3.61105	GLI3	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr6_+_89790459_89790479	3.60573	GLI3	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr6_-_41747595_41747652	3.60549	GLI3	ENST00000373018.3|FRS3|ENSG00000137218.6|fibroblast growth factor receptor substrate 3
hg19_v2_chr16_-_850723_850741	3.55896	GLI3	ENST00000248150.4|GNG13|ENSG00000127588.4|guanine nucleotide binding protein (G protein), gamma 13
hg19_v2_chr2_+_25015968_25016029	3.54522	GLI3	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr20_-_62258394_62258464	3.53244	GLI3	ENST00000370077.1|GMEB2|ENSG00000101216.6|glucocorticoid modulatory element binding protein 2
hg19_v2_chr14_+_105155925_105155979	3.51852	GLI3	ENST00000330634.7|INF2|ENSG00000203485.8|inverted formin, FH2 and WH2 domain containing 	ENST00000398337.4|INF2|ENSG00000203485.8|inverted formin, FH2 and WH2 domain containing 	ENST00000392634.4|INF2|ENSG00000203485.8|inverted formin, FH2 and WH2 domain containing
hg19_v2_chr20_+_44637526_44637554	3.50734	GLI3	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chrX_-_7895755_7895780	3.45791	GLI3	ENST00000444736.1|PNPLA4|ENSG00000006757.7|patatin-like phospholipase domain containing 4 	ENST00000537427.1|PNPLA4|ENSG00000006757.7|patatin-like phospholipase domain containing 4 	ENST00000442940.1|PNPLA4|ENSG00000006757.7|patatin-like phospholipase domain containing 4
hg19_v2_chr12_-_54978086_54978100	3.45732	GLI3	ENST00000553113.1|PPP1R1A|ENSG00000135447.12|protein phosphatase 1, regulatory (inhibitor) subunit 1A
hg19_v2_chr7_-_108166505_108166762	3.44984	GLI3	ENST00000426128.2|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000427008.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000388728.5|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000257694.8|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000422087.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000453144.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000436062.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8
hg19_v2_chr9_+_87285539_87285575	3.447	GLI3	ENST00000359847.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr12_-_54582655_54582780	3.4427	GLI3	ENST00000504338.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514685.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000504797.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000513838.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000505128.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000337581.3|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000503306.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000243112.5|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514196.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000506169.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000507904.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000508394.2|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v2_chr19_+_708910_708975	3.43892	GLI3	ENST00000264560.7|PALM|ENSG00000099864.13|paralemmin
hg19_v2_chr14_-_106322288_106322325	3.43188	GLI3	ENST00000390559.2|IGHM|ENSG00000211899.3|immunoglobulin heavy constant mu
hg19_v2_chr9_+_90112767_90112808	3.42472	GLI3	ENST00000408954.3|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr21_-_46348694_46348788	3.40992	GLI3	ENST00000355153.4|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000397850.2|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr9_-_113800317_113800328	3.40695	GLI3	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr8_-_98290087_98290197	3.40475	GLI3	ENST00000322128.3|TSPYL5|ENSG00000180543.3|TSPY-like 5
hg19_v2_chr11_-_115630900_115630923	3.40357	GLI3	ENST00000537070.1|LINC00900|ENSG00000246100.3|long intergenic non-protein coding RNA 900 	ENST00000499809.1|LINC00900|ENSG00000246100.3|long intergenic non-protein coding RNA 900 	ENST00000514294.2|LINC00900|ENSG00000246100.3|long intergenic non-protein coding RNA 900 	ENST00000535683.1|LINC00900|ENSG00000246100.3|long intergenic non-protein coding RNA 900
hg19_v2_chr1_+_92414928_92414944	3.39786	GLI3	ENST00000362005.3|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000370389.2|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000399546.2|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000423434.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000394530.3|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000440509.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific
hg19_v2_chrX_+_52780318_52780346	3.39265	GLI3	ENST00000375515.3|SSX2B|ENSG00000157950.10|synovial sarcoma, X breakpoint 2B 	ENST00000276049.6|SSX2B|ENSG00000157950.10|synovial sarcoma, X breakpoint 2B
hg19_v2_chr11_-_117103208_117103288	3.36514	GLI3	ENST00000320934.3|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7 	ENST00000530269.1|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7
hg19_v2_chr8_+_11141925_11141937	3.36296	GLI3	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr12_-_112819896_112819896	3.36087	GLI3	ENST00000377560.5|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000430131.2|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550722.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550724.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4
hg19_v2_chr14_-_107219365_107219365	3.36059	GLI3	ENST00000424969.2|IGHV3-74|ENSG00000224650.2|immunoglobulin heavy variable 3-74
hg19_v2_chr22_-_50312052_50312121	3.35602	GLI3	ENST00000330817.6|ALG12|ENSG00000182858.9|ALG12, alpha-1,6-mannosyltransferase
hg19_v2_chr4_+_72053017_72053044	3.35475	GLI3	ENST00000351898.6|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr4_-_176733897_176733906	3.34886	GLI3	ENST00000393658.2|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chrX_+_135229559_135229576	3.33313	GLI3	ENST00000394155.2|FHL1|ENSG00000022267.12|four and a half LIM domains 1
hg19_v2_chr6_+_89790490_89790506	3.32345	GLI3	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr16_+_1306060_1306088	3.3218	GLI3	ENST00000397534.2|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chrX_+_135229600_135229624	3.31407	GLI3	ENST00000370690.3|FHL1|ENSG00000022267.12|four and a half LIM domains 1
hg19_v2_chr9_+_90112741_90112761	3.31089	GLI3	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr19_+_44556158_44556206	3.30107	GLI3	ENST00000434772.3|ZNF223|ENSG00000178386.8|zinc finger protein 223 	ENST00000585552.1|ZNF223|ENSG00000178386.8|zinc finger protein 223
hg19_v2_chr17_-_39928106_39928152	3.29858	GLI3	ENST00000540235.1|JUP|ENSG00000173801.12|junction plakoglobin
hg19_v2_chr1_+_3388181_3388194	3.29327	GLI3	ENST00000418137.1|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16 	ENST00000413250.2|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16
hg19_v2_chr14_-_74960030_74960050	3.29209	GLI3	ENST00000553490.1|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2 	ENST00000557510.1|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2
hg19_v2_chr10_-_1034237_1034289	3.28274	GLI3	ENST00000381466.1|AL359878.1|ENSG00000205740.1|Uncharacterized protein
hg19_v2_chr11_+_68228186_68228281	3.2772	GLI3	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr8_+_1922024_1922069	3.27277	GLI3	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr1_-_86861936_86862023	3.25339	GLI3	ENST00000394733.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000359242.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000294678.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000479890.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000317336.7|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370567.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000394731.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000478286.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370566.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr12_-_8218997_8219067	3.25003	GLI3	ENST00000307637.4|C3AR1|ENSG00000171860.4|complement component 3a receptor 1
hg19_v2_chr1_-_21606013_21606059	3.24396	GLI3	ENST00000357071.4|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr8_+_103563792_103563808	3.23881	GLI3	ENST00000285402.3|ODF1|ENSG00000155087.3|outer dense fiber of sperm tails 1
hg19_v2_chr1_-_47407111_47407128	3.22285	GLI3	ENST00000371904.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr1_-_110283138_110283138	3.21898	GLI3	ENST00000256594.3|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr2_+_238768187_238768275	3.21598	GLI3	ENST00000254661.4|RAMP1|ENSG00000132329.6|receptor (G protein-coupled) activity modifying protein 1 	ENST00000409726.1|RAMP1|ENSG00000132329.6|receptor (G protein-coupled) activity modifying protein 1
hg19_v2_chr9_-_113800341_113800373	3.2091	GLI3	ENST00000358883.4|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr1_-_241520525_241520536	3.20319	GLI3	ENST00000366565.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr16_-_4466622_4466665	3.19856	GLI3	ENST00000570645.1|CORO7|ENSG00000262246.1|coronin 7 	ENST00000574025.1|CORO7|ENSG00000262246.1|coronin 7 	ENST00000572898.1|CORO7|ENSG00000262246.1|coronin 7 	ENST00000537233.2|CORO7|ENSG00000262246.1|coronin 7 	ENST00000571059.1|CORO7|ENSG00000262246.1|coronin 7 	ENST00000251166.4|CORO7|ENSG00000262246.1|coronin 7
hg19_v2_chr19_+_58962971_58963014	3.19269	GLI3	ENST00000336614.4|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000545523.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599194.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000598244.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599193.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000594214.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000391696.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B
hg19_v2_chr19_+_17186577_17186637	3.19221	GLI3	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr12_-_12509929_12510001	3.18412	GLI3	ENST00000381800.2|LOH12CR2|ENSG00000205791.2|loss of heterozygosity, 12, chromosomal region 2 (non-protein coding)
hg19_v2_chr2_+_220283091_220283108	3.17908	GLI3	ENST00000373960.3|DES|ENSG00000175084.7|desmin
hg19_v2_chr6_-_163148780_163148813	3.17601	GLI3	ENST00000366892.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000366898.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000366897.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000366896.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase
hg19_v2_chr3_-_125802765_125802990	3.16999	GLI3	ENST00000514891.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000512470.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000504035.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000360370.4|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000513723.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000510651.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000514333.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3
hg19_v2_chrX_-_53254358_53254406	3.16821	GLI3	ENST00000404049.3|KDM5C|ENSG00000126012.7|lysine (K)-specific demethylase 5C
hg19_v2_chr3_-_43663519_43663560	3.16552	GLI3	ENST00000427171.1|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000292246.3|ANO10|ENSG00000160746.8|anoctamin 10
hg19_v2_chr17_+_4046462_4046550	3.16412	GLI3	ENST00000577075.2|CYB5D2|ENSG00000167740.5|cytochrome b5 domain containing 2 	ENST00000575251.1|CYB5D2|ENSG00000167740.5|cytochrome b5 domain containing 2 	ENST00000301391.3|CYB5D2|ENSG00000167740.5|cytochrome b5 domain containing 2
hg19_v2_chr1_+_183774240_183774270	3.16328	GLI3	ENST00000360851.3|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr20_+_814377_814452	3.16211	GLI3	ENST00000304189.2|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A 	ENST00000381939.1|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr14_-_74959978_74959992	3.15957	GLI3	ENST00000541064.1|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2
hg19_v2_chr2_-_175351744_175351828	3.1564	GLI3	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr1_-_36945097_36945097	3.15454	GLI3	ENST00000331941.5|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000418048.2|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000338937.5|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000440588.2|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte)
hg19_v2_chrX_-_48271344_48271344	3.13917	GLI3	ENST00000376884.2|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B 	ENST00000396928.1|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B
hg19_v2_chr11_+_45868957_45869044	3.10478	GLI3	ENST00000443527.2|CRY2|ENSG00000121671.7|cryptochrome 2 (photolyase-like)
hg19_v2_chr3_-_179169330_179169384	3.1041	GLI3	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr15_-_90892669_90892669	3.09	GLI3	ENST00000412799.2|GABARAPL3|ENSG00000238244.2|GABA(A) receptors associated protein like 3, pseudogene
hg19_v2_chrX_+_46940254_46940264	3.08085	GLI3	ENST00000336169.3|RGN|ENSG00000130988.8|regucalcin
hg19_v2_chr2_-_242041607_242041747	3.07975	GLI3	ENST00000434791.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000401626.2|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000439144.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000406593.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000495694.1|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000407095.3|MTERFD2|ENSG00000122085.12|MTERF domain containing 2 	ENST00000391980.2|MTERFD2|ENSG00000122085.12|MTERF domain containing 2
hg19_v2_chr5_-_95297678_95297775	3.07772	GLI3	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr19_+_36024310_36024329	3.06732	GLI3	ENST00000222286.4|GAPDHS|ENSG00000105679.4|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
hg19_v2_chr1_-_104238912_104238912	3.02599	GLI3	ENST00000330330.5|AMY1B|ENSG00000174876.12|amylase, alpha 1B (salivary)
hg19_v2_chr19_-_42931567_42931581	3.02192	GLI3	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr5_+_140044261_140044464	3.01416	GLI3	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr18_+_59992514_59992525	3.00179	GLI3	ENST00000269485.7|TNFRSF11A|ENSG00000141655.11|tumor necrosis factor receptor superfamily, member 11a, NFKB activator
hg19_v2_chr5_-_218251_218330	2.99518	GLI3	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr10_+_73079000_73079024	2.9902	GLI3	ENST00000373189.5|SLC29A3|ENSG00000198246.7|solute carrier family 29 (equilibrative nucleoside transporter), member 3
hg19_v2_chr6_-_159421198_159421254	2.98896	GLI3	ENST00000252655.1|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000297262.3|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000367069.2|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas)
hg19_v2_chr6_+_28109703_28109716	2.98691	GLI3	ENST00000457389.2|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8 	ENST00000330236.6|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8
hg19_v2_chrX_-_48216101_48216142	2.98079	GLI3	ENST00000298396.2|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3 	ENST00000376893.3|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3
hg19_v2_chr1_+_13910194_13910339	2.98035	GLI3	ENST00000376057.4|PDPN|ENSG00000162493.12|podoplanin 	ENST00000510906.1|PDPN|ENSG00000162493.12|podoplanin
hg19_v2_chr19_+_49713991_49714040	2.9702	GLI3	ENST00000597316.1|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr3_+_108308513_108308558	2.96985	GLI3	ENST00000361582.3|DZIP3|ENSG00000198919.8|DAZ interacting zinc finger protein 3
hg19_v2_chr17_-_2207062_2207116	2.96052	GLI3	ENST00000263073.6|SMG6|ENSG00000070366.9|SMG6 nonsense mediated mRNA decay factor
hg19_v2_chrX_+_48242863_48242939	2.95312	GLI3	ENST00000376886.2|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4 	ENST00000375517.3|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4
hg19_v2_chr17_+_32582293_32582312	2.94975	GLI3	ENST00000580907.1|CCL2|ENSG00000108691.5|chemokine (C-C motif) ligand 2 	ENST00000225831.4|CCL2|ENSG00000108691.5|chemokine (C-C motif) ligand 2
hg19_v2_chr11_+_14665263_14665274	2.94764	GLI3	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr10_+_127408110_127408145	2.9454	GLI3	ENST00000356792.4|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr8_+_146052849_146053003	2.94415	GLI3	ENST00000532777.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325241.6|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000446747.2|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000525266.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000544249.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325217.5|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000533314.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000527218.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000529819.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000528372.1|ZNF7|ENSG00000147789.11|zinc finger protein 7
hg19_v2_chrX_+_134166333_134166371	2.9439	GLI3	ENST00000257013.7|FAM127A|ENSG00000134590.9|family with sequence similarity 127, member A
hg19_v2_chr17_-_6554877_6554954	2.93689	GLI3	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr14_-_107083690_107083830	2.93314	GLI3	ENST00000455737.1|IGHV4-59|ENSG00000224373.2|immunoglobulin heavy variable 4-59 	ENST00000390629.2|IGHV4-59|ENSG00000224373.2|immunoglobulin heavy variable 4-59
hg19_v2_chr1_+_178511876_178511950	2.93131	GLI3	ENST00000367638.1|C1orf220|ENSG00000213057.4|chromosome 1 open reading frame 220 	ENST00000367636.4|C1ORF220|ENSG00000184909.8|C1ORF220
hg19_v2_chr21_-_37432764_37432831	2.92924	GLI3	ENST00000399212.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000446166.1|SETD4|ENSG00000185917.9|SET domain containing 4
hg19_v2_chr12_-_13248598_13248630	2.92904	GLI3	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chrX_-_38186811_38186826	2.91059	GLI3	ENST00000318842.7|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator
hg19_v2_chr16_+_55690002_55690023	2.90814	GLI3	ENST00000414754.3|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr7_-_91808845_91808845	2.90441	GLI3	ENST00000343318.5|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr16_+_70148230_70148275	2.87263	GLI3	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr6_-_28226984_28227011	2.87246	GLI3	ENST00000423974.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr14_-_74959994_74960020	2.85124	GLI3	ENST00000238633.2|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2 	ENST00000434013.2|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2
hg19_v2_chr14_+_75761099_75761114	2.8438	GLI3	ENST00000561000.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5	ENST00000558575.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5
hg19_v2_chrX_-_11308598_11308610	2.83169	GLI3	ENST00000380717.3|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr9_-_122131696_122131745	2.83057	GLI3	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr11_+_60197040_60197062	2.82135	GLI3	ENST00000300190.2|MS4A5|ENSG00000166930.2|membrane-spanning 4-domains, subfamily A, member 5
hg19_v2_chr20_-_58508702_58508728	2.81317	GLI3	ENST00000357552.3|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2 	ENST00000425931.1|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2
hg19_v2_chr22_+_51176624_51176663	2.80798	GLI3	ENST00000216139.5|ACR|ENSG00000100312.6|acrosin 	ENST00000529621.1|ACR|ENSG00000100312.6|acrosin
hg19_v2_chrY_-_25345070_25345241	2.8024	GLI3	ENST00000382510.4|DAZ1|ENSG00000188120.10|deleted in azoospermia 1 	ENST00000426000.2|DAZ1|ENSG00000188120.10|deleted in azoospermia 1 	ENST00000540248.1|DAZ1|ENSG00000188120.10|deleted in azoospermia 1 	ENST00000405239.1|DAZ1|ENSG00000188120.10|deleted in azoospermia 1
hg19_v2_chr13_+_115047097_115047120	2.7961	GLI3	ENST00000351487.5|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr4_+_159593418_159593517	2.78476	GLI3	ENST00000507475.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase 	ENST00000307738.5|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase
hg19_v2_chr19_+_7599128_7599150	2.76781	GLI3	ENST00000545201.2|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr16_+_55690205_55690352	2.745	GLI3	ENST00000379906.2|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr20_-_3762087_3762100	2.73294	GLI3	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chrX_-_52736211_52736239	2.72509	GLI3	ENST00000336777.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2 	ENST00000337502.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2
hg19_v2_chr17_+_31255165_31255228	2.72308	GLI3	ENST00000578289.1|TMEM98|ENSG00000006042.7|transmembrane protein 98 	ENST00000439138.1|TMEM98|ENSG00000006042.7|transmembrane protein 98
hg19_v2_chr5_+_65892174_65892229	2.72209	GLI3	ENST00000404260.3|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000403625.2|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000406374.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr5_+_175487692_175487692	2.70912	GLI3	ENST00000510151.1|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chr22_-_24622080_24622080	2.68772	GLI3	ENST00000425408.1|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5
hg19_v2_chr1_-_16678914_16678989	2.68407	GLI3	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr1_-_104239076_104239076	2.67544	GLI3	ENST00000370080.3|AMY1B|ENSG00000174876.12|amylase, alpha 1B (salivary)
hg19_v2_chr9_-_101017862_101017897	2.67394	GLI3	ENST00000375064.1|TBC1D2|ENSG00000095383.15|TBC1 domain family, member 2 	ENST00000342112.5|TBC1D2|ENSG00000095383.15|TBC1 domain family, member 2
hg19_v2_chr16_+_27325202_27325313	2.67197	GLI3	ENST00000395762.2|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000562142.1|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000561742.1|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000543915.2|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000449195.1|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000380922.3|IL4R|ENSG00000077238.9|interleukin 4 receptor 	ENST00000563002.1|IL4R|ENSG00000077238.9|interleukin 4 receptor
hg19_v2_chr13_-_67804445_67804475	2.65963	GLI3	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr20_-_18447667_18447829	2.6422	GLI3	ENST00000262547.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000329494.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000357236.4|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1
hg19_v2_chr1_+_27114418_27114518	2.64025	GLI3	ENST00000078527.4|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr10_+_88718314_88718388	2.63824	GLI3	ENST00000348795.4|SNCG|ENSG00000173267.9|synuclein, gamma (breast cancer-specific protein 1)
hg19_v2_chr14_-_21491305_21491316	2.61804	GLI3	ENST00000554531.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr17_+_72270380_72270420	2.61216	GLI3	ENST00000582036.1|DNAI2|ENSG00000171595.9|dynein, axonemal, intermediate chain 2 	ENST00000307504.5|DNAI2|ENSG00000171595.9|dynein, axonemal, intermediate chain 2
hg19_v2_chr7_+_2443202_2443260	2.60679	GLI3	ENST00000258711.6|CHST12|ENSG00000136213.7|carbohydrate (chondroitin 4) sulfotransferase 12
hg19_v2_chr8_+_22102611_22102624	2.59818	GLI3	ENST00000306433.4|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
hg19_v2_chr8_+_22102626_22102748	2.59721	GLI3	ENST00000519237.1|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa 	ENST00000397802.4|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
hg19_v2_chr17_+_21729899_21729906	2.58336	GLI3	ENST00000583708.1|UBBP4|ENSG00000263563.1|ubiquitin B pseudogene 4
hg19_v2_chr9_+_134378289_134378409	2.58331	GLI3	ENST00000423007.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000404875.2|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000441334.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000341012.7|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000372228.3|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000402686.3|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000419118.2|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000541219.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000354713.4|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000418774.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000415075.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000448212.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1 	ENST00000430619.1|POMT1|ENSG00000130714.11|protein-O-mannosyltransferase 1
hg19_v2_chr10_+_124134201_124134350	2.57962	GLI3	ENST00000368990.3|PLEKHA1|ENSG00000107679.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 	ENST00000368988.1|PLEKHA1|ENSG00000107679.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 	ENST00000368989.2|PLEKHA1|ENSG00000107679.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 	ENST00000463663.2|PLEKHA1|ENSG00000107679.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
hg19_v2_chr14_-_106805716_106805716	2.56286	GLI3	ENST00000438142.2|IGHV4-31|ENSG00000231475.2|immunoglobulin heavy variable 4-31
hg19_v2_chr1_+_36690011_36690092	2.55328	GLI3	ENST00000354618.5|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000469141.2|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000478853.1|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3
hg19_v2_chr22_-_20004330_20004364	2.55093	GLI3	ENST00000263207.3|ARVCF|ENSG00000099889.9|armadillo repeat gene deleted in velocardiofacial syndrome
hg19_v2_chr2_-_62081254_62081278	2.54809	GLI3	ENST00000405894.3|FAM161A|ENSG00000170264.8|family with sequence similarity 161, member A
hg19_v2_chr1_+_28206150_28206242	2.54554	GLI3	ENST00000456990.1|THEMIS2|ENSG00000130775.11|thymocyte selection associated family member 2
hg19_v2_chrX_+_152086373_152086414	2.54118	GLI3	ENST00000318529.8|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain)
hg19_v2_chr16_+_3508063_3508086	2.53585	GLI3	ENST00000576787.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572942.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000576916.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000575076.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572131.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr11_-_119252359_119252421	2.53421	GLI3	ENST00000455332.2|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr3_+_101568349_101568365	2.53178	GLI3	ENST00000326151.5|NFKBIZ|ENSG00000144802.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 	ENST00000326172.5|NFKBIZ|ENSG00000144802.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
hg19_v2_chr1_+_104198377_104198377	2.52821	GLI3	ENST00000370083.4|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr8_-_21771214_21771371	2.52318	GLI3	ENST00000276420.4|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr14_+_22984601_22984601	2.52034	GLI3	ENST00000390509.1|TRAJ28|ENSG00000211861.1|T cell receptor alpha joining 28
hg19_v2_chr6_-_116601044_116601106	2.51956	GLI3	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr2_-_11272234_11272390	2.51932	GLI3	ENST00000590207.1|AC062028.1|ENSG00000145063.10|AC062028.1	ENST00000417697.2|AC062028.1|ENSG00000145063.10|AC062028.1	ENST00000396164.1|AC062028.1|ENSG00000145063.10|AC062028.1	ENST00000536743.1|AC062028.1|ENSG00000145063.10|AC062028.1	ENST00000544306.1|AC062028.1|ENSG00000145063.10|AC062028.1
hg19_v2_chr4_+_159593271_159593295	2.51679	GLI3	ENST00000512251.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase 	ENST00000511912.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase
hg19_v2_chrX_+_55744166_55744222	2.51552	GLI3	ENST00000374941.4|RRAGB|ENSG00000083750.8|Ras-related GTP binding B 	ENST00000414239.1|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr11_+_66276550_66276550	2.515	GLI3	ENST00000419755.3|CTD-3074O7.11|ENSG00000256349.1|Bardet-Biedl syndrome 1 protein
hg19_v2_chr7_+_5919458_5919458	2.51407	GLI3	ENST00000416608.1|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr15_-_77712477_77712499	2.50411	GLI3	ENST00000560626.2|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1
hg19_v2_chr10_+_88718397_88718424	2.48317	GLI3	ENST00000372017.3|SNCG|ENSG00000173267.9|synuclein, gamma (breast cancer-specific protein 1)
hg19_v2_chr2_-_89266286_89266286	2.48295	GLI3	ENST00000464162.1|IGKV1-6|ENSG00000239855.1|immunoglobulin kappa variable 1-6
hg19_v2_chr9_+_131218408_131218487	2.48085	GLI3	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr15_+_85923856_85923987	2.48048	GLI3	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr15_+_85923797_85923844	2.47388	GLI3	ENST00000559362.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr19_+_57791806_57791875	2.47105	GLI3	ENST00000360338.3|ZNF460|ENSG00000197714.4|zinc finger protein 460
hg19_v2_chr2_+_26915584_26915634	2.46813	GLI3	ENST00000302909.3|KCNK3|ENSG00000171303.5|potassium channel, subfamily K, member 3
hg19_v2_chr19_+_40697514_40697651	2.46459	GLI3	ENST00000253055.3|MAP3K10|ENSG00000130758.3|mitogen-activated protein kinase kinase kinase 10
hg19_v2_chr9_+_131219179_131219198	2.46346	GLI3	ENST00000372791.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr10_+_104503727_104503748	2.45913	GLI3	ENST00000448841.1|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr3_+_138067314_138067428	2.45792	GLI3	ENST00000423968.2|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr19_-_10679644_10679661	2.45625	GLI3	ENST00000393599.2|CDKN2D|ENSG00000129355.6|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
hg19_v2_chr19_-_54726850_54726959	2.45273	GLI3	ENST00000245620.9|LILRB3|ENSG00000204577.7|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 	ENST00000346401.6|LILRB3|ENSG00000204577.7|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 	ENST00000424807.1|LILRB3|ENSG00000204577.7|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 	ENST00000445347.1|LILRB3|ENSG00000204577.7|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
hg19_v2_chr8_-_21771182_21771208	2.45218	GLI3	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr6_+_29427548_29427548	2.45097	GLI3	ENST00000377132.1|OR2H1|ENSG00000204688.5|olfactory receptor, family 2, subfamily H, member 1
hg19_v2_chr3_-_43663389_43663511	2.45064	GLI3	ENST00000444344.1|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000456438.1|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000350459.4|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000396091.3|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000451430.2|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000428472.1|ANO10|ENSG00000160746.8|anoctamin 10 	ENST00000414522.2|ANO10|ENSG00000160746.8|anoctamin 10
hg19_v2_chr19_+_10217364_10217409	2.43901	GLI3	ENST00000430370.1|PPAN|ENSG00000130810.15|peter pan homolog (Drosophila)
hg19_v2_chr12_-_45269430_45269440	2.43302	GLI3	ENST00000395487.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr12_-_11463353_11463372	2.42566	GLI3	ENST00000279575.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000535904.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000445719.2|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4
hg19_v2_chr18_+_59992527_59992555	2.4138	GLI3	ENST00000586569.1|TNFRSF11A|ENSG00000141655.11|tumor necrosis factor receptor superfamily, member 11a, NFKB activator
hg19_v2_chr17_-_1420006_1420036	2.412	GLI3	ENST00000320345.6|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K 	ENST00000406424.4|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr12_+_69186125_69186125	2.40902	GLI3	ENST00000399333.3|AC124890.1|ENSG00000251695.2|HCG1774533, isoform CRA_a; PRO2268; Uncharacterized protein
hg19_v2_chr14_-_25103472_25103483	2.40813	GLI3	ENST00000216341.4|GZMB|ENSG00000100453.8|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 	ENST00000382542.1|GZMB|ENSG00000100453.8|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 	ENST00000382540.1|GZMB|ENSG00000100453.8|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
hg19_v2_chr10_+_135192695_135192780	2.40363	GLI3	ENST00000368539.4|PAOX|ENSG00000148832.10|polyamine oxidase (exo-N4-amino) 	ENST00000278060.5|PAOX|ENSG00000148832.10|polyamine oxidase (exo-N4-amino) 	ENST00000357296.3|PAOX|ENSG00000148832.10|polyamine oxidase (exo-N4-amino)
hg19_v2_chr1_-_160990886_160990921	2.40119	GLI3	ENST00000537746.1|F11R|ENSG00000158769.13|F11 receptor
hg19_v2_chr1_-_40105617_40105617	2.3999	GLI3	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chrX_-_17878827_17878846	2.38732	GLI3	ENST00000360011.1|RAI2|ENSG00000131831.13|retinoic acid induced 2
hg19_v2_chr17_-_34808047_34808104	2.3606	GLI3	ENST00000592614.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000591542.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000400684.4|TBC1D3H|ENSG00000242384.3|TBC1 domain family, member 3H 	ENST00000330458.7|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000341264.6|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000592987.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G
hg19_v2_chr9_-_101017900_101017951	2.3588	GLI3	ENST00000375066.5|TBC1D2|ENSG00000095383.15|TBC1 domain family, member 2
hg19_v2_chrX_+_55744228_55744318	2.35096	GLI3	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr10_-_7661623_7661637	2.34413	GLI3	ENST00000298441.6|ITIH5|ENSG00000123243.10|inter-alpha-trypsin inhibitor heavy chain family, member 5
hg19_v2_chr18_+_5238549_5238665	2.33664	GLI3	ENST00000580684.1|LINC00667|ENSG00000263753.2|long intergenic non-protein coding RNA 667
hg19_v2_chrX_-_100914781_100914876	2.33407	GLI3	ENST00000431597.1|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2 	ENST00000458024.1|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2 	ENST00000413506.1|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2 	ENST00000440675.1|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2 	ENST00000328766.5|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2 	ENST00000356824.4|ARMCX2|ENSG00000184867.9|armadillo repeat containing, X-linked 2
hg19_v2_chr17_-_40897043_40897087	2.3308	GLI3	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr2_-_85839146_85839198	2.33061	GLI3	ENST00000306336.5|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68 	ENST00000409734.3|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68
hg19_v2_chr4_-_48908822_48908845	2.32922	GLI3	ENST00000508632.1|OCIAD2|ENSG00000145247.7|OCIA domain containing 2
hg19_v2_chr16_-_2908155_2908178	2.32569	GLI3	ENST00000571228.1|PRSS22|ENSG00000005001.5|protease, serine, 22 	ENST00000161006.3|PRSS22|ENSG00000005001.5|protease, serine, 22
hg19_v2_chr16_-_88923285_88923388	2.32455	GLI3	ENST00000542788.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000569433.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000268695.5|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000568311.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase
hg19_v2_chr22_-_21482352_21482352	2.32262	GLI3	ENST00000329949.3|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr19_+_45312347_45312378	2.31981	GLI3	ENST00000270233.6|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group) 	ENST00000591520.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr11_-_1785139_1785222	2.31698	GLI3	ENST00000236671.2|CTSD|ENSG00000117984.8|cathepsin D
hg19_v2_chr16_+_77233294_77233341	2.31065	GLI3	ENST00000378644.4|SYCE1L|ENSG00000205078.5|synaptonemal complex central element protein 1-like
hg19_v2_chr14_+_50291993_50291993	2.30865	GLI3	ENST00000595378.1|AL627171.2|ENSG00000269832.1|HCG1786899; PRO2610; Uncharacterized protein
hg19_v2_chr19_+_48281928_48281939	2.30109	GLI3	ENST00000593892.1|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr1_+_150229554_150229660	2.29557	GLI3	ENST00000369111.4|CA14|ENSG00000118298.6|carbonic anhydrase XIV
hg19_v2_chr3_+_38495333_38495422	2.29508	GLI3	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chrX_-_78622805_78622877	2.2718	GLI3	ENST00000373298.2|ITM2A|ENSG00000078596.6|integral membrane protein 2A
hg19_v2_chr1_+_11724167_11724197	2.27086	GLI3	ENST00000376753.4|FBXO6|ENSG00000116663.6|F-box protein 6
hg19_v2_chrX_-_7895479_7895491	2.25542	GLI3	ENST00000381042.4|PNPLA4|ENSG00000006757.7|patatin-like phospholipase domain containing 4
hg19_v2_chr19_+_17337406_17337461	2.2535	GLI3	ENST00000597836.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chrX_+_30233668_30233698	2.25011	GLI3	ENST00000378988.4|MAGEB2|ENSG00000099399.5|melanoma antigen family B, 2
hg19_v2_chr8_-_82024290_82024310	2.24703	GLI3	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr13_+_20532807_20532841	2.22563	GLI3	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr1_-_226111929_226112026	2.22184	GLI3	ENST00000343818.6|PYCR2|ENSG00000143811.12|pyrroline-5-carboxylate reductase family, member 2 	ENST00000432920.2|RP4-559A3.7|ENSG00000255835.1|Uncharacterized protein
hg19_v2_chr7_-_24797032_24797162	2.21676	GLI3	ENST00000409970.1|DFNA5|ENSG00000105928.9|deafness, autosomal dominant 5 	ENST00000409775.3|DFNA5|ENSG00000105928.9|deafness, autosomal dominant 5
hg19_v2_chr17_-_1419878_1419912	2.21264	GLI3	ENST00000449479.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K 	ENST00000477910.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K 	ENST00000542125.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K 	ENST00000575172.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr3_+_40566369_40566400	2.20559	GLI3	ENST00000403205.2|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000310898.1|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000339296.5|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000431278.1|ZNF621|ENSG00000172888.7|zinc finger protein 621
hg19_v2_chr16_+_89894911_89894955	2.20518	GLI3	ENST00000378247.3|SPIRE2|ENSG00000204991.6|spire-type actin nucleation factor 2 	ENST00000563972.1|SPIRE2|ENSG00000204991.6|spire-type actin nucleation factor 2
hg19_v2_chr1_+_17248418_17248445	2.19637	GLI3	ENST00000375541.5|CROCC|ENSG00000058453.12|ciliary rootlet coiled-coil, rootletin
hg19_v2_chr11_-_111383064_111383092	2.19442	GLI3	ENST00000525791.1|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000456861.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000356018.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4
hg19_v2_chr6_+_116601265_116601288	2.18824	GLI3	ENST00000452085.3|DSE|ENSG00000111817.12|dermatan sulfate epimerase
hg19_v2_chr17_+_33448593_33448602	2.18807	GLI3	ENST00000158009.5|FNDC8|ENSG00000073598.5|fibronectin type III domain containing 8
hg19_v2_chr19_-_12476443_12476467	2.18003	GLI3	ENST00000242804.4|ZNF442|ENSG00000198342.5|zinc finger protein 442 	ENST00000438182.1|ZNF442|ENSG00000198342.5|zinc finger protein 442
hg19_v2_chr10_-_62332357_62332428	2.1788	GLI3	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr6_-_29600832_29600982	2.17781	GLI3	ENST00000377016.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000376977.3|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000377034.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr1_-_182573514_182573543	2.17712	GLI3	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr11_-_73720276_73720286	2.17476	GLI3	ENST00000348534.4|UCP3|ENSG00000175564.8|uncoupling protein 3 (mitochondrial, proton carrier)
hg19_v2_chr9_+_90112117_90112164	2.17031	GLI3	ENST00000358077.5|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr8_+_94929168_94929235	2.16527	GLI3	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr17_-_3867585_3867748	2.16162	GLI3	ENST00000359983.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000352011.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397043.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397041.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397035.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397039.1|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000309890.7|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous
hg19_v2_chr12_+_57984965_57985059	2.16033	GLI3	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr9_+_131218698_131218750	2.15863	GLI3	ENST00000434106.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000546203.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000446274.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000421776.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000432065.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr19_-_51456198_51456301	2.14954	GLI3	ENST00000594846.1|KLK5|ENSG00000167754.8|kallikrein-related peptidase 5
hg19_v2_chr15_+_45422131_45422172	2.14525	GLI3	ENST00000321429.4|DUOX1|ENSG00000137857.13|dual oxidase 1
hg19_v2_chr17_-_26876350_26876417	2.14437	GLI3	ENST00000470125.1|UNC119|ENSG00000109103.7|unc-119 homolog (C. elegans)
hg19_v2_chr14_-_107095662_107095662	2.13891	GLI3	ENST00000390630.2|IGHV4-61|ENSG00000211970.2|immunoglobulin heavy variable 4-61
hg19_v2_chr8_+_94929077_94929106	2.13291	GLI3	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr8_-_33457453_33457624	2.12903	GLI3	ENST00000523956.1|DUSP26|ENSG00000133878.4|dual specificity phosphatase 26 (putative) 	ENST00000256261.4|DUSP26|ENSG00000133878.4|dual specificity phosphatase 26 (putative)
hg19_v2_chr12_+_69202975_69203013	2.12845	GLI3	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr5_+_161495038_161495056	2.12694	GLI3	ENST00000393933.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr11_+_1940786_1940799	2.12414	GLI3	ENST00000278317.6|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381561.4|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381548.3|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000360603.3|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381549.3|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast)
hg19_v2_chrX_+_22056165_22056173	2.12273	GLI3	ENST00000535894.1|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr4_+_62067860_62067900	2.12027	GLI3	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr19_-_19754404_19754478	2.11463	GLI3	ENST00000587205.1|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000445806.2|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000203556.4|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr17_+_10600894_10600974	2.11255	GLI3	ENST00000379774.4|ADPRM|ENSG00000170222.11|ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
hg19_v2_chr20_-_42939782_42939858	2.10905	GLI3	ENST00000396825.3|FITM2|ENSG00000197296.5|fat storage-inducing transmembrane protein 2
hg19_v2_chr6_-_28367481_28367508	2.10695	GLI3	ENST00000396827.3|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr3_-_47619623_47619623	2.09769	GLI3	ENST00000456150.1|CSPG5|ENSG00000114646.5|chondroitin sulfate proteoglycan 5 (neuroglycan C)
hg19_v2_chr17_-_34757039_34757050	2.08735	GLI3	ENST00000455054.2|TBC1D3H|ENSG00000242384.3|TBC1 domain family, member 3H 	ENST00000308078.7|TBC1D3C|ENSG00000234972.4|TBC1 domain family, member 3C
hg19_v2_chr14_-_106845789_106845851	2.08042	GLI3	ENST00000390617.2|IGHV3-35|ENSG00000211957.2|immunoglobulin heavy variable 3-35 (non-functional)
hg19_v2_chr7_-_100860851_100860954	2.07827	GLI3	ENST00000223127.3|PLOD3|ENSG00000106397.7|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
hg19_v2_chr21_+_48055527_48055608	2.07786	GLI3	ENST00000397638.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000458387.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000451211.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000291705.6|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397637.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000334494.4|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397628.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000440086.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2
hg19_v2_chr17_+_72744791_72744810	2.06876	GLI3	ENST00000583369.1|SLC9A3R1|ENSG00000109062.5|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 	ENST00000262613.5|SLC9A3R1|ENSG00000109062.5|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
hg19_v2_chr2_+_60983361_60983418	2.06204	GLI3	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr17_-_26697304_26697373	2.05633	GLI3	ENST00000536498.1|VTN|ENSG00000109072.9|vitronectin
hg19_v2_chr19_+_39833036_39833108	2.05255	GLI3	ENST00000602243.1|SAMD4B|ENSG00000179134.10|sterile alpha motif domain containing 4B 	ENST00000598913.1|SAMD4B|ENSG00000179134.10|sterile alpha motif domain containing 4B 	ENST00000314471.6|SAMD4B|ENSG00000179134.10|sterile alpha motif domain containing 4B
hg19_v2_chrX_+_51928002_51928017	2.04553	GLI3	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr10_-_97050777_97050806	2.04362	GLI3	ENST00000329399.6|PDLIM1|ENSG00000107438.4|PDZ and LIM domain 1
hg19_v2_chr11_-_61684962_61685063	2.03532	GLI3	ENST00000394836.2|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1
hg19_v2_chr19_+_7598890_7599090	2.03388	GLI3	ENST00000221249.6|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601668.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601001.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr14_+_105452094_105452152	2.03084	GLI3	ENST00000551606.1|C14orf79|ENSG00000140104.9|chromosome 14 open reading frame 79 	ENST00000547315.1|C14orf79|ENSG00000140104.9|chromosome 14 open reading frame 79
hg19_v2_chrY_+_25365594_25365701	2.02958	GLI3	ENST00000382449.1|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382440.1|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382306.2|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382434.3|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000449947.1|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382294.2|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382433.4|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382424.4|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000400493.2|DAZ2|ENSG00000205944.7|deleted in azoospermia 2 	ENST00000382431.4|DAZ2|ENSG00000205944.7|deleted in azoospermia 2
hg19_v2_chr12_-_21927736_21927768	2.01744	GLI3	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr14_+_101292445_101292485	2.01706	GLI3	ENST00000429159.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000520714.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000522771.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000424076.3|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000423456.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000521404.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000556736.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000451743.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000398518.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000554639.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000452120.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000519709.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000412736.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr8_+_94929110_94929167	2.01015	GLI3	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr1_-_111970353_111970399	2.00993	GLI3	ENST00000369732.3|OVGP1|ENSG00000085465.11|oviductal glycoprotein 1, 120kDa
hg19_v2_chr6_-_33037019_33037047	1.99113	GLI3	ENST00000437811.1|HLA-DPA1|ENSG00000231389.3|major histocompatibility complex, class II, DP alpha 1
hg19_v2_chr17_-_34592032_34592032	1.98982	GLI3	ENST00000457979.3|TBC1D3C|ENSG00000234972.4|TBC1 domain family, member 3C
hg19_v2_chr14_-_106330458_106330479	1.98535	GLI3	ENST00000461719.1|IGHJ4|ENSG00000240041.1|immunoglobulin heavy joining 4
hg19_v2_chr7_+_47694842_47694842	1.97835	GLI3	ENST00000408988.2|C7orf65|ENSG00000221845.2|chromosome 7 open reading frame 65
hg19_v2_chr9_-_27529726_27529827	1.97543	GLI3	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr21_+_40823753_40823764	1.97246	GLI3	ENST00000333634.4|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein
hg19_v2_chr19_-_58238958_58239000	1.96624	GLI3	ENST00000596939.1|ZNF671|ENSG00000083814.8|zinc finger protein 671 	ENST00000335820.3|ZNF671|ENSG00000083814.8|zinc finger protein 671 	ENST00000317398.6|ZNF671|ENSG00000083814.8|zinc finger protein 671
hg19_v2_chr11_+_89867803_89867906	1.96072	GLI3	ENST00000321955.4|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000525171.1|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000375944.3|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2
hg19_v2_chr7_-_143059845_143059866	1.95686	GLI3	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr19_+_10217270_10217321	1.95493	GLI3	ENST00000446223.1|PPAN|ENSG00000130810.15|peter pan homolog (Drosophila)
hg19_v2_chr19_+_35759968_35760042	1.95187	GLI3	ENST00000222305.3|USF2|ENSG00000105698.11|upstream transcription factor 2, c-fos interacting 	ENST00000595068.1|USF2|ENSG00000105698.11|upstream transcription factor 2, c-fos interacting 	ENST00000379134.3|USF2|ENSG00000105698.11|upstream transcription factor 2, c-fos interacting 	ENST00000594064.1|USF2|ENSG00000105698.11|upstream transcription factor 2, c-fos interacting 	ENST00000598058.1|USF2|ENSG00000105698.11|upstream transcription factor 2, c-fos interacting
hg19_v2_chr1_+_207226574_207226656	1.94784	GLI3	ENST00000367080.3|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENST00000367079.2|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
hg19_v2_chr20_+_48599506_48599536	1.94622	GLI3	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr17_-_1419914_1419939	1.94137	GLI3	ENST00000397335.3|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K 	ENST00000574561.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr17_+_7184986_7185076	1.9371	GLI3	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chrX_-_130037198_130037234	1.9238	GLI3	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr19_-_3606590_3606658	1.92145	GLI3	ENST00000411851.3|TBXA2R|ENSG00000006638.7|thromboxane A2 receptor
hg19_v2_chrX_-_134156502_134156577	1.9204	GLI3	ENST00000391440.1|FAM127C|ENSG00000212747.3|family with sequence similarity 127, member C
hg19_v2_chrX_+_49020121_49020334	1.9168	GLI3	ENST00000415364.1|MAGIX|ENSG00000017621.11|MAGI family member, X-linked 	ENST00000376338.3|MAGIX|ENSG00000017621.11|MAGI family member, X-linked 	ENST00000425285.1|MAGIX|ENSG00000017621.11|MAGI family member, X-linked
hg19_v2_chr7_+_106809406_106809460	1.91446	GLI3	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr13_+_111806083_111806105	1.90352	GLI3	ENST00000375736.4|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr11_-_73309228_73309257	1.89918	GLI3	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr11_-_64511789_64512061	1.89825	GLI3	ENST00000419843.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated) 	ENST00000394430.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated)
hg19_v2_chr7_+_87257701_87257770	1.89697	GLI3	ENST00000338056.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B 	ENST00000493037.1|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr13_+_111806055_111806080	1.89414	GLI3	ENST00000218789.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr19_+_48281946_48281974	1.88744	GLI3	ENST00000595615.1|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr15_-_78933567_78933604	1.88037	GLI3	ENST00000261751.3|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal) 	ENST00000412074.2|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal)
hg19_v2_chr7_+_87563458_87563489	1.8777	GLI3	ENST00000398204.4|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22
hg19_v2_chr16_-_68269971_68270059	1.86978	GLI3	ENST00000565858.1|ESRP2|ENSG00000103067.7|epithelial splicing regulatory protein 2
hg19_v2_chr12_+_100661156_100661210	1.86846	GLI3	ENST00000360820.2|SCYL2|ENSG00000136021.13|SCY1-like 2 (S. cerevisiae)
hg19_v2_chr12_-_88535747_88535841	1.86367	GLI3	ENST00000309041.7|CEP290|ENSG00000198707.10|centrosomal protein 290kDa
hg19_v2_chr6_-_133084580_133084605	1.85967	GLI3	ENST00000525270.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000530536.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000524919.1|VNN2|ENSG00000112303.9|vanin 2
hg19_v2_chr16_+_3115611_3115813	1.85337	GLI3	ENST00000530890.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000444393.3|IL32|ENSG00000008517.12|interleukin 32 	ENST00000533097.2|IL32|ENSG00000008517.12|interleukin 32 	ENST00000008180.9|IL32|ENSG00000008517.12|interleukin 32 	ENST00000396890.2|IL32|ENSG00000008517.12|interleukin 32 	ENST00000525228.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000548652.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000525377.2|IL32|ENSG00000008517.12|interleukin 32 	ENST00000530538.2|IL32|ENSG00000008517.12|interleukin 32 	ENST00000549213.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000552936.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000548476.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000552664.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000552356.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000551513.1|IL32|ENSG00000008517.12|interleukin 32 	ENST00000382213.3|IL32|ENSG00000008517.12|interleukin 32 	ENST00000548246.1|IL32|ENSG00000008517.12|interleukin 32
hg19_v2_chr8_+_6264113_6264191	1.84817	GLI3	ENST00000344683.5|MCPH1|ENSG00000147316.8|microcephalin 1 	ENST00000519480.1|MCPH1|ENSG00000147316.8|microcephalin 1 	ENST00000522905.1|MCPH1|ENSG00000147316.8|microcephalin 1
hg19_v2_chrX_-_2418936_2419024	1.84516	GLI3	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr17_-_7017968_7018021	1.84438	GLI3	ENST00000355035.5|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr15_+_45422178_45422216	1.8393	GLI3	ENST00000389037.3|DUOX1|ENSG00000137857.13|dual oxidase 1 	ENST00000558322.1|DUOX1|ENSG00000137857.13|dual oxidase 1
hg19_v2_chr3_+_39093481_39093520	1.83494	GLI3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chrX_-_34675391_34675411	1.82779	GLI3	ENST00000275954.3|TMEM47|ENSG00000147027.3|transmembrane protein 47
hg19_v2_chr7_+_119913688_119913728	1.82328	GLI3	ENST00000331113.4|KCND2|ENSG00000184408.5|potassium voltage-gated channel, Shal-related subfamily, member 2
hg19_v2_chr2_-_85895295_85895331	1.82324	GLI3	ENST00000428225.1|SFTPB|ENSG00000168878.12|surfactant protein B 	ENST00000519937.2|SFTPB|ENSG00000168878.12|surfactant protein B
hg19_v2_chrX_+_49160148_49160148	1.82169	GLI3	ENST00000407599.3|GAGE10|ENSG00000215274.5|G antigen 10
hg19_v2_chr19_+_489140_489179	1.81537	GLI3	ENST00000587541.1|MADCAM1|ENSG00000099866.10|mucosal vascular addressin cell adhesion molecule 1
hg19_v2_chr7_-_2883928_2883993	1.81392	GLI3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr13_-_52733980_52734002	1.80996	GLI3	ENST00000339406.3|NEK3|ENSG00000136098.12|NIMA-related kinase 3
hg19_v2_chr22_+_46481861_46481895	1.8076	GLI3	ENST00000360737.3|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr1_-_85040090_85040168	1.8018	GLI3	ENST00000370630.5|CTBS|ENSG00000117151.8|chitobiase, di-N-acetyl-
hg19_v2_chr1_-_241520385_241520457	1.79949	GLI3	ENST00000366564.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr11_+_18230727_18230755	1.79754	GLI3	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr7_-_108096822_108096889	1.7967	GLI3	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr5_+_76506706_76506787	1.79602	GLI3	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr2_+_241564655_241564668	1.79564	GLI3	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr2_-_62081148_62081204	1.79354	GLI3	ENST00000404929.1|FAM161A|ENSG00000170264.8|family with sequence similarity 161, member A
hg19_v2_chr9_-_95896550_95896570	1.79152	GLI3	ENST00000375446.4|NINJ1|ENSG00000131669.5|ninjurin 1
hg19_v2_chr19_+_7011509_7011526	1.79144	GLI3	ENST00000377296.3|AC025278.1|ENSG00000204752.3|Uncharacterized protein
hg19_v2_chr1_+_32671236_32671280	1.78876	GLI3	ENST00000537469.1|IQCC|ENSG00000160051.7|IQ motif containing C 	ENST00000291358.6|IQCC|ENSG00000160051.7|IQ motif containing C
hg19_v2_chr11_-_506739_506821	1.7859	GLI3	ENST00000529306.1|RNH1|ENSG00000023191.12|ribonuclease/angiogenin inhibitor 1 	ENST00000438658.2|RNH1|ENSG00000023191.12|ribonuclease/angiogenin inhibitor 1 	ENST00000527485.1|RNH1|ENSG00000023191.12|ribonuclease/angiogenin inhibitor 1 	ENST00000397615.2|RNH1|ENSG00000023191.12|ribonuclease/angiogenin inhibitor 1 	ENST00000397614.1|RNH1|ENSG00000023191.12|ribonuclease/angiogenin inhibitor 1
hg19_v2_chr14_-_106622419_106622419	1.78423	GLI3	ENST00000390604.2|IGHV3-16|ENSG00000211944.2|immunoglobulin heavy variable 3-16 (non-functional)
hg19_v2_chr1_+_28655505_28655629	1.783	GLI3	ENST00000373842.4|MED18|ENSG00000130772.9|mediator complex subunit 18 	ENST00000398997.2|MED18|ENSG00000130772.9|mediator complex subunit 18
hg19_v2_chr19_+_676385_676403	1.77552	GLI3	ENST00000166139.4|FSTL3|ENSG00000070404.5|follistatin-like 3 (secreted glycoprotein)
hg19_v2_chr12_-_57634475_57634532	1.76278	GLI3	ENST00000393825.1|NDUFA4L2|ENSG00000185633.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v2_chr17_-_36348610_36348666	1.75611	GLI3	ENST00000339023.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3 	ENST00000354664.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3
hg19_v2_chrX_-_52683950_52683950	1.75412	GLI3	ENST00000298181.5|SSX7|ENSG00000187754.8|synovial sarcoma, X breakpoint 7
hg19_v2_chr22_+_22707260_22707289	1.7539	GLI3	ENST00000390293.1|IGLV5-48|ENSG00000211647.1|immunoglobulin lambda variable 5-48 (non-functional)
hg19_v2_chr1_+_17634689_17634696	1.75147	GLI3	ENST00000375453.1|PADI4|ENSG00000159339.9|peptidyl arginine deiminase, type IV 	ENST00000375448.4|PADI4|ENSG00000159339.9|peptidyl arginine deiminase, type IV
hg19_v2_chr5_-_180236811_180236880	1.74818	GLI3	ENST00000446023.2|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr11_-_64646086_64646191	1.74779	GLI3	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr5_-_132112907_132112918	1.73407	GLI3	ENST00000458488.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr17_-_71308119_71308159	1.72792	GLI3	ENST00000439510.2|CDC42EP4|ENSG00000179604.8|CDC42 effector protein (Rho GTPase binding) 4 	ENST00000581014.1|CDC42EP4|ENSG00000179604.8|CDC42 effector protein (Rho GTPase binding) 4 	ENST00000579611.1|CDC42EP4|ENSG00000179604.8|CDC42 effector protein (Rho GTPase binding) 4
hg19_v2_chr1_-_160681593_160681641	1.72331	GLI3	ENST00000368045.3|CD48|ENSG00000117091.5|CD48 molecule 	ENST00000368046.3|CD48|ENSG00000117091.5|CD48 molecule
hg19_v2_chr11_+_89764274_89764274	1.7229	GLI3	ENST00000448984.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C 	ENST00000432771.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C
hg19_v2_chr14_+_105941118_105941196	1.71964	GLI3	ENST00000550577.1|CRIP2|ENSG00000182809.6|cysteine-rich protein 2 	ENST00000538259.2|CRIP2|ENSG00000182809.6|cysteine-rich protein 2
hg19_v2_chr4_+_3344141_3344178	1.71941	GLI3	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr16_+_1730338_1730369	1.69126	GLI3	ENST00000566691.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382710.4|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr14_-_77737543_77737655	1.68696	GLI3	ENST00000298352.4|NGB|ENSG00000165553.4|neuroglobin
hg19_v2_chr5_-_137090028_137090075	1.68549	GLI3	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr6_+_26204825_26204858	1.68315	GLI3	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr13_+_49822041_49822184	1.68274	GLI3	ENST00000538056.1|CDADC1|ENSG00000102543.10|cytidine and dCMP deaminase domain containing 1 	ENST00000251108.6|CDADC1|ENSG00000102543.10|cytidine and dCMP deaminase domain containing 1 	ENST00000444959.1|CDADC1|ENSG00000102543.10|cytidine and dCMP deaminase domain containing 1 	ENST00000429346.1|CDADC1|ENSG00000102543.10|cytidine and dCMP deaminase domain containing 1
hg19_v2_chrX_-_47489244_47489364	1.67709	GLI3	ENST00000469388.1|CFP|ENSG00000126759.8|complement factor properdin 	ENST00000396992.3|CFP|ENSG00000126759.8|complement factor properdin 	ENST00000377005.2|CFP|ENSG00000126759.8|complement factor properdin
hg19_v2_chr16_-_4465886_4465906	1.67316	GLI3	ENST00000539968.1|CORO7|ENSG00000262246.1|coronin 7
hg19_v2_chr6_-_30815936_30816035	1.67232	GLI3	ENST00000442852.1|XXbac-BPG27H4.8|ENSG00000237923.1|XXbac-BPG27H4.8
hg19_v2_chr12_-_54813229_54813273	1.66807	GLI3	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr8_+_22857048_22857092	1.66791	GLI3	ENST00000251822.6|RHOBTB2|ENSG00000008853.12|Rho-related BTB domain containing 2
hg19_v2_chr6_+_27356497_27356557	1.66701	GLI3	ENST00000244576.4|ZNF391|ENSG00000124613.4|zinc finger protein 391
hg19_v2_chr14_-_61748550_61748559	1.66148	GLI3	ENST00000555868.1|TMEM30B|ENSG00000182107.5|transmembrane protein 30B
hg19_v2_chrX_+_51927919_51927991	1.65744	GLI3	ENST00000416960.1|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr17_+_61554413_61554434	1.65665	GLI3	ENST00000538928.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000290866.4|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000428043.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme
hg19_v2_chr14_-_23770683_23770792	1.65287	GLI3	ENST00000561437.1|PPP1R3E|ENSG00000235194.4|protein phosphatase 1, regulatory subunit 3E 	ENST00000559942.1|PPP1R3E|ENSG00000235194.4|protein phosphatase 1, regulatory subunit 3E 	ENST00000560913.1|PPP1R3E|ENSG00000235194.4|protein phosphatase 1, regulatory subunit 3E 	ENST00000559314.1|PPP1R3E|ENSG00000235194.4|protein phosphatase 1, regulatory subunit 3E 	ENST00000558058.1|PPP1R3E|ENSG00000235194.4|protein phosphatase 1, regulatory subunit 3E
hg19_v2_chr17_+_40118805_40118900	1.65199	GLI3	ENST00000591072.1|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase 	ENST00000587679.1|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase 	ENST00000393888.1|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase 	ENST00000441615.2|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr17_-_7018128_7018150	1.65033	GLI3	ENST00000380952.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2 	ENST00000254850.7|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chrX_+_153046456_153046571	1.64831	GLI3	ENST00000393786.3|SRPK3|ENSG00000184343.6|SRSF protein kinase 3 	ENST00000370104.1|SRPK3|ENSG00000184343.6|SRSF protein kinase 3 	ENST00000370108.3|SRPK3|ENSG00000184343.6|SRSF protein kinase 3 	ENST00000370101.3|SRPK3|ENSG00000184343.6|SRSF protein kinase 3 	ENST00000430541.1|SRPK3|ENSG00000184343.6|SRSF protein kinase 3 	ENST00000370100.1|SRPK3|ENSG00000184343.6|SRSF protein kinase 3
hg19_v2_chr12_-_56101647_56101699	1.64172	GLI3	ENST00000347027.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257879.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257880.7|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394230.2|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394229.2|ITGA7|ENSG00000135424.11|integrin, alpha 7
hg19_v2_chr11_+_121461097_121461128	1.63821	GLI3	ENST00000527934.1|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr5_-_132112921_132112960	1.63758	GLI3	ENST00000378721.4|SEPT8|ENSG00000164402.9|septin 8 	ENST00000378701.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr1_-_45308616_45308735	1.6305	GLI3	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr9_-_21368075_21368075	1.62983	GLI3	ENST00000449498.1|IFNA13|ENSG00000233816.2|interferon, alpha 13
hg19_v2_chr12_-_52867569_52867598	1.62887	GLI3	ENST00000252250.6|KRT6C|ENSG00000170465.9|keratin 6C
hg19_v2_chr8_-_6795823_6795860	1.62188	GLI3	ENST00000297435.2|DEFA4|ENSG00000164821.4|defensin, alpha 4, corticostatin
hg19_v2_chr3_-_119278376_119278403	1.62086	GLI3	ENST00000478182.1|CD80|ENSG00000121594.7|CD80 molecule
hg19_v2_chr11_-_89541743_89541743	1.61549	GLI3	ENST00000329758.1|TRIM49|ENSG00000168930.9|tripartite motif containing 49
hg19_v2_chr17_-_4464081_4464113	1.61025	GLI3	ENST00000574154.1|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6
hg19_v2_chrX_-_51812268_51812368	1.60552	GLI3	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chrX_+_49178536_49178536	1.60365	GLI3	ENST00000442437.2|GAGE12J|ENSG00000224659.2|G antigen 12J
hg19_v2_chr8_-_59572093_59572169	1.59296	GLI3	ENST00000427130.2|NSMAF|ENSG00000035681.3|neutral sphingomyelinase (N-SMase) activation associated factor
hg19_v2_chr19_-_54693401_54693491	1.58979	GLI3	ENST00000338624.6|MBOAT7|ENSG00000125505.12|membrane bound O-acyltransferase domain containing 7
hg19_v2_chr5_+_113769205_113769227	1.58891	GLI3	ENST00000503706.1|KCNN2|ENSG00000080709.10|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
hg19_v2_chr12_+_7055767_7055804	1.58501	GLI3	ENST00000447931.2|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6
hg19_v2_chr15_+_78632666_78632701	1.57817	GLI3	ENST00000299529.6|CRABP1|ENSG00000166426.7|cellular retinoic acid binding protein 1
hg19_v2_chr1_-_16344500_16344568	1.57588	GLI3	ENST00000406363.2|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000411503.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000545268.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000487046.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular)
hg19_v2_chr14_-_25103388_25103415	1.56498	GLI3	ENST00000526004.1|GZMB|ENSG00000100453.8|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 	ENST00000415355.3|GZMB|ENSG00000100453.8|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
hg19_v2_chr19_-_344786_344826	1.56408	GLI3	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr3_+_46204959_46205096	1.55185	GLI3	ENST00000357422.2|CCR3|ENSG00000183625.10|chemokine (C-C motif) receptor 3
hg19_v2_chr19_-_40596767_40596825	1.54996	GLI3	ENST00000599972.1|ZNF780A|ENSG00000197782.10|zinc finger protein 780A 	ENST00000450241.2|ZNF780A|ENSG00000197782.10|zinc finger protein 780A 	ENST00000595687.2|ZNF780A|ENSG00000197782.10|zinc finger protein 780A
hg19_v2_chr19_-_376011_376031	1.54656	GLI3	ENST00000342640.4|THEG|ENSG00000105549.6|theg spermatid protein
hg19_v2_chr17_+_6899366_6899384	1.53737	GLI3	ENST00000251535.6|ALOX12|ENSG00000108839.7|arachidonate 12-lipoxygenase
hg19_v2_chr7_-_767249_767307	1.53708	GLI3	ENST00000403562.1|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta
hg19_v2_chr3_-_8686479_8686486	1.53694	GLI3	ENST00000544814.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans) 	ENST00000427408.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans)
hg19_v2_chr17_+_40118759_40118772	1.53383	GLI3	ENST00000393892.3|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr19_+_16771936_16772072	1.52971	GLI3	ENST00000187762.2|TMEM38A|ENSG00000072954.2|transmembrane protein 38A 	ENST00000599479.1|TMEM38A|ENSG00000072954.2|transmembrane protein 38A
hg19_v2_chr15_-_26108355_26108417	1.52688	GLI3	ENST00000356865.6|ATP10A|ENSG00000206190.7|ATPase, class V, type 10A
hg19_v2_chr12_+_111051832_111051873	1.52468	GLI3	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr5_+_6633534_6633581	1.52147	GLI3	ENST00000537411.1|SRD5A1|ENSG00000145545.7|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) 	ENST00000538824.1|SRD5A1|ENSG00000145545.7|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)
hg19_v2_chr16_-_23724518_23724568	1.51969	GLI3	ENST00000457008.2|ERN2|ENSG00000134398.8|endoplasmic reticulum to nucleus signaling 2
hg19_v2_chr7_-_92465868_92465922	1.51238	GLI3	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr20_-_18477862_18477890	1.51225	GLI3	ENST00000337227.4|RBBP9|ENSG00000089050.10|retinoblastoma binding protein 9
hg19_v2_chr4_+_3388057_3388075	1.50675	GLI3	ENST00000538395.1|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr19_+_54705025_54705034	1.5051	GLI3	ENST00000441429.1|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr16_-_2318055_2318104	1.50474	GLI3	ENST00000561518.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000561718.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000567147.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000562690.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000569598.2|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr1_+_152956549_152956566	1.4984	GLI3	ENST00000307122.2|SPRR1A|ENSG00000169474.3|small proline-rich protein 1A
hg19_v2_chr17_+_36283971_36284016	1.49605	GLI3	ENST00000327454.6|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F 	ENST00000378174.5|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F
hg19_v2_chr15_-_65579177_65579253	1.48835	GLI3	ENST00000444347.2|PARP16|ENSG00000138617.10|poly (ADP-ribose) polymerase family, member 16 	ENST00000261888.6|PARP16|ENSG00000138617.10|poly (ADP-ribose) polymerase family, member 16
hg19_v2_chr4_+_140374961_140375016	1.48352	GLI3	ENST00000305626.5|RAB33B|ENSG00000172007.5|RAB33B, member RAS oncogene family
hg19_v2_chr19_-_54746600_54746649	1.4835	GLI3	ENST00000245621.5|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 	ENST00000407860.2|LILRB3|ENSG00000204577.7|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 	ENST00000270464.5|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 	ENST00000419410.2|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 	ENST00000391735.3|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 	ENST00000396365.2|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 	ENST00000440558.2|LILRA6|ENSG00000244482.5|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
hg19_v2_chr7_-_99679324_99679371	1.48317	GLI3	ENST00000292393.5|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000413658.2|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000412947.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000441298.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000449785.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000299667.4|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000424697.1|ZNF3|ENSG00000166526.12|zinc finger protein 3
hg19_v2_chr11_+_76777979_76778027	1.4821	GLI3	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr9_-_5339873_5339881	1.47701	GLI3	ENST00000223862.1|RLN1|ENSG00000107018.6|relaxin 1 	ENST00000223858.4|RLN1|ENSG00000107018.6|relaxin 1
hg19_v2_chr14_+_61788429_61788501	1.47683	GLI3	ENST00000332981.5|PRKCH|ENSG00000027075.9|protein kinase C, eta
hg19_v2_chrX_+_15525426_15525441	1.47271	GLI3	ENST00000342014.6|BMX|ENSG00000102010.10|BMX non-receptor tyrosine kinase
hg19_v2_chr16_-_75241050_75241083	1.47244	GLI3	ENST00000303037.8|CTRB2|ENSG00000168928.8|chymotrypsinogen B2
hg19_v2_chr17_+_75123947_75123964	1.47029	GLI3	ENST00000586429.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr1_-_40254482_40254550	1.46664	GLI3	ENST00000397360.2|BMP8B|ENSG00000116985.6|bone morphogenetic protein 8b 	ENST00000372827.3|BMP8B|ENSG00000116985.6|bone morphogenetic protein 8b
hg19_v2_chr14_+_93118813_93118870	1.46484	GLI3	ENST00000556418.1|RIN3|ENSG00000100599.11|Ras and Rab interactor 3
hg19_v2_chr9_-_115480303_115480516	1.46433	GLI3	ENST00000374234.1|INIP|ENSG00000148153.9|INTS3 and NABP interacting protein 	ENST00000374238.1|INIP|ENSG00000148153.9|INTS3 and NABP interacting protein 	ENST00000374236.1|INIP|ENSG00000148153.9|INTS3 and NABP interacting protein 	ENST00000374242.4|INIP|ENSG00000148153.9|INTS3 and NABP interacting protein
hg19_v2_chr19_+_55085248_55085346	1.45771	GLI3	ENST00000391738.3|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000251376.3|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000391737.1|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000396321.2|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 	ENST00000418536.2|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 	ENST00000448689.1|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
hg19_v2_chr17_-_15522826_15522826	1.4535	GLI3	ENST00000395906.3|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr10_+_17270214_17270258	1.4494	GLI3	ENST00000544301.1|VIM|ENSG00000026025.9|vimentin
hg19_v2_chr17_-_3461092_3461126	1.44829	GLI3	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr2_+_65215604_65215625	1.44742	GLI3	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr9_-_35112376_35112395	1.44684	GLI3	ENST00000488109.2|FAM214B|ENSG00000005238.15|family with sequence similarity 214, member B
hg19_v2_chr2_-_43823093_43823113	1.4461	GLI3	ENST00000405006.4|THADA|ENSG00000115970.14|thyroid adenoma associated
hg19_v2_chr3_+_4535155_4535234	1.44154	GLI3	ENST00000544951.1|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr11_+_76778033_76778047	1.44094	GLI3	ENST00000456580.2|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr13_+_20532848_20532890	1.43822	GLI3	ENST00000382874.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr15_+_59063478_59063561	1.43785	GLI3	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr1_-_47407136_47407154	1.43654	GLI3	ENST00000462347.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000371905.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000310638.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr7_-_99764907_99764924	1.4322	GLI3	ENST00000413800.1|GAL3ST4|ENSG00000197093.6|galactose-3-O-sulfotransferase 4
hg19_v2_chr11_+_45907177_45907233	1.43213	GLI3	ENST00000241014.2|MAPK8IP1|ENSG00000121653.7|mitogen-activated protein kinase 8 interacting protein 1
hg19_v2_chr1_+_202976493_202976530	1.42532	GLI3	ENST00000367242.3|TMEM183A|ENSG00000163444.7|transmembrane protein 183A
hg19_v2_chr19_-_3606838_3606898	1.42234	GLI3	ENST00000375190.4|TBXA2R|ENSG00000006638.7|thromboxane A2 receptor
hg19_v2_chr1_+_183155373_183155423	1.41864	GLI3	ENST00000493293.1|LAMC2|ENSG00000058085.10|laminin, gamma 2 	ENST00000264144.4|LAMC2|ENSG00000058085.10|laminin, gamma 2
hg19_v2_chr1_+_92414952_92414991	1.41718	GLI3	ENST00000449584.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000427104.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000355011.3|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000448194.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000426141.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000450792.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000548992.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000552654.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific 	ENST00000457265.1|BRDT|ENSG00000137948.14|bromodomain, testis-specific
hg19_v2_chr17_+_16593539_16593639	1.41293	GLI3	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr16_+_31885079_31885165	1.4107	GLI3	ENST00000300870.10|ZNF267|ENSG00000185947.10|zinc finger protein 267 	ENST00000394846.3|ZNF267|ENSG00000185947.10|zinc finger protein 267
hg19_v2_chr20_+_35974532_35974557	1.40978	GLI3	ENST00000373578.2|SRC|ENSG00000197122.7|v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
hg19_v2_chr10_-_102989551_102989551	1.40973	GLI3	ENST00000370193.2|LBX1|ENSG00000138136.5|ladybird homeobox 1
hg19_v2_chr2_+_217363793_217363823	1.40938	GLI3	ENST00000456586.1|RPL37A|ENSG00000197756.5|ribosomal protein L37a 	ENST00000598925.1|RPL37A|ENSG00000197756.5|ribosomal protein L37a 	ENST00000427280.2|RPL37A|ENSG00000197756.5|ribosomal protein L37a
hg19_v2_chr7_+_87563557_87563735	1.40155	GLI3	ENST00000439864.1|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22 	ENST00000412441.1|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22 	ENST00000398201.4|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22 	ENST00000265727.7|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22 	ENST00000315984.7|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22 	ENST00000398209.3|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22
hg19_v2_chr1_+_203595903_203595934	1.39781	GLI3	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr6_-_34073743_34073761	1.39372	GLI3	ENST00000609222.1|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr3_-_9811595_9811666	1.39291	GLI3	ENST00000256460.3|CAMK1|ENSG00000134072.6|calcium/calmodulin-dependent protein kinase I
hg19_v2_chr3_-_48470838_48470872	1.38934	GLI3	ENST00000358459.4|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000358536.4|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chr1_+_207669573_207669606	1.38593	GLI3	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr1_-_152386732_152386745	1.37943	GLI3	ENST00000271835.3|CRNN|ENSG00000143536.7|cornulin
hg19_v2_chr1_-_26372602_26372624	1.37762	GLI3	ENST00000374278.3|SLC30A2|ENSG00000158014.10|solute carrier family 30 (zinc transporter), member 2 	ENST00000374276.3|SLC30A2|ENSG00000158014.10|solute carrier family 30 (zinc transporter), member 2
hg19_v2_chr11_-_64510409_64510445	1.37671	GLI3	ENST00000394429.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated) 	ENST00000394428.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated)
hg19_v2_chr8_+_98900132_98900205	1.37639	GLI3	ENST00000520016.1|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr5_-_154230130_154230210	1.37506	GLI3	ENST00000519501.1|FAXDC2|ENSG00000170271.6|fatty acid hydroxylase domain containing 2 	ENST00000518651.1|FAXDC2|ENSG00000170271.6|fatty acid hydroxylase domain containing 2 	ENST00000517938.1|FAXDC2|ENSG00000170271.6|fatty acid hydroxylase domain containing 2 	ENST00000520461.1|FAXDC2|ENSG00000170271.6|fatty acid hydroxylase domain containing 2
hg19_v2_chr9_+_131873227_131873243	1.37295	GLI3	ENST00000358994.4|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000455292.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4
hg19_v2_chr17_-_79620721_79620767	1.36865	GLI3	ENST00000571004.1|PDE6G|ENSG00000185527.7|phosphodiesterase 6G, cGMP-specific, rod, gamma
hg19_v2_chr1_+_220701740_220701899	1.365	GLI3	ENST00000366917.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr7_+_143078652_143078754	1.36303	GLI3	ENST00000354434.4|ZYX|ENSG00000159840.11|zyxin 	ENST00000449423.2|ZYX|ENSG00000159840.11|zyxin
hg19_v2_chr6_-_3752222_3752260	1.34638	GLI3	ENST00000380283.4|PXDC1|ENSG00000168994.9|PX domain containing 1
hg19_v2_chr16_+_66400533_66400545	1.34577	GLI3	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr22_-_28197486_28197544	1.34003	GLI3	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr2_-_96781984_96781984	1.33388	GLI3	ENST00000409345.3|ADRA2B|ENSG00000222040.3|adrenoceptor alpha 2B
hg19_v2_chr21_-_35831880_35831902	1.32707	GLI3	ENST00000399289.3|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1 	ENST00000432085.1|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1
hg19_v2_chr11_+_66025167_66025190	1.32599	GLI3	ENST00000394067.2|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000316924.5|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000421552.1|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000394078.1|KLC2|ENSG00000174996.7|kinesin light chain 2
hg19_v2_chr16_+_28996416_28996444	1.32589	GLI3	ENST00000395456.2|LAT|ENSG00000213658.6|linker for activation of T cells 	ENST00000454369.2|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr2_+_131769256_131769328	1.31896	GLI3	ENST00000355771.3|ARHGEF4|ENSG00000136002.12|Rho guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr20_-_1165117_1165117	1.31881	GLI3	ENST00000381894.3|TMEM74B|ENSG00000125895.5|transmembrane protein 74B
hg19_v2_chr21_-_36260980_36261011	1.31872	GLI3	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr16_+_28996114_28996166	1.31714	GLI3	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr16_+_89686991_89687015	1.31542	GLI3	ENST00000393092.3|DPEP1|ENSG00000015413.5|dipeptidase 1 (renal)
hg19_v2_chr18_+_56530136_56530199	1.30325	GLI3	ENST00000591083.1|ZNF532|ENSG00000074657.9|zinc finger protein 532
hg19_v2_chr17_-_76899275_76899302	1.30314	GLI3	ENST00000322630.2|DDC8|ENSG00000178404.5|Protein DDC8 homolog  	ENST00000586713.1|DDC8|ENSG00000178404.5|Protein DDC8 homolog
hg19_v2_chr13_+_115047053_115047095	1.29043	GLI3	ENST00000375299.3|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr5_+_161494770_161494787	1.28975	GLI3	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr8_-_38008783_38008783	1.28587	GLI3	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr6_-_30181133_30181150	1.2826	GLI3	ENST00000454678.2|TRIM26|ENSG00000234127.4|tripartite motif containing 26 	ENST00000434785.1|TRIM26|ENSG00000234127.4|tripartite motif containing 26
hg19_v2_chr14_-_106781017_106781017	1.28007	GLI3	ENST00000390612.2|IGHV4-28|ENSG00000211952.2|immunoglobulin heavy variable 4-28
hg19_v2_chr1_-_29508321_29508444	1.27673	GLI3	ENST00000546138.1|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr6_+_163148161_163148181	1.27317	GLI3	ENST00000337019.3|PACRG|ENSG00000112530.7|PARK2 co-regulated 	ENST00000366889.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr3_+_186648307_186648375	1.27157	GLI3	ENST00000457772.2|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 	ENST00000455441.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 	ENST00000427315.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr1_+_67673297_67673349	1.2698	GLI3	ENST00000425614.1|IL23R|ENSG00000162594.10|interleukin 23 receptor 	ENST00000395227.1|IL23R|ENSG00000162594.10|interleukin 23 receptor
hg19_v2_chr7_-_142176790_142176842	1.26928	GLI3	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4 (gene/pseudogene)
hg19_v2_chr16_+_16425734_16425734	1.26718	GLI3	ENST00000381497.2|AC138969.4|ENSG00000183889.8|Protein PKD1P1
hg19_v2_chr11_+_114168085_114168222	1.26558	GLI3	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr19_-_2051223_2051252	1.26439	GLI3	ENST00000309340.7|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589534.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000250896.3|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589509.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr20_-_52687059_52687143	1.25426	GLI3	ENST00000371435.2|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1 	ENST00000395961.3|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1
hg19_v2_chr7_+_73624276_73624311	1.25407	GLI3	ENST00000475494.1|LAT2|ENSG00000086730.12|linker for activation of T cells family, member 2 	ENST00000398475.1|LAT2|ENSG00000086730.12|linker for activation of T cells family, member 2
hg19_v2_chr9_-_33264676_33264761	1.24632	GLI3	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr12_+_72233487_72233563	1.24485	GLI3	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr16_-_67840442_67840555	1.24444	GLI3	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr9_+_8858102_8858147	1.2419	GLI3	ENST00000447950.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1	ENST00000430766.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1
hg19_v2_chr1_-_161600942_161600975	1.2409	GLI3	ENST00000421702.2|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
hg19_v2_chr9_-_139927462_139927508	1.24028	GLI3	ENST00000314412.6|FUT7|ENSG00000180549.7|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
hg19_v2_chr18_-_44556449_44556449	1.23791	GLI3	ENST00000330682.2|TCEB3C|ENSG00000183791.4|transcription elongation factor B polypeptide 3C (elongin A3)
hg19_v2_chr19_-_48389651_48389656	1.23783	GLI3	ENST00000222002.3|SULT2A1|ENSG00000105398.3|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg19_v2_chr19_-_6379069_6379069	1.2357	GLI3	ENST00000597721.1|PSPN|ENSG00000125650.4|persephin
hg19_v2_chr1_+_160765884_160765903	1.23379	GLI3	ENST00000392203.4|LY9|ENSG00000122224.13|lymphocyte antigen 9
hg19_v2_chr20_+_34742650_34742678	1.23324	GLI3	ENST00000373945.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000338074.2|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr19_-_18197799_18197815	1.23112	GLI3	ENST00000430026.3|IL12RB1|ENSG00000096996.11|interleukin 12 receptor, beta 1 	ENST00000593993.2|IL12RB1|ENSG00000096996.11|interleukin 12 receptor, beta 1
hg19_v2_chr7_-_108096765_108096784	1.23065	GLI3	ENST00000379024.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000351718.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr20_-_23731893_23731920	1.22696	GLI3	ENST00000398402.1|CST1|ENSG00000170373.4|cystatin SN
hg19_v2_chr17_-_7017559_7017630	1.2244	GLI3	ENST00000446679.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr8_+_121137333_121137352	1.22296	GLI3	ENST00000309791.4|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000297848.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000247781.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1
hg19_v2_chr16_+_30675654_30675778	1.21561	GLI3	ENST00000287468.5|FBRS|ENSG00000156860.11|fibrosin 	ENST00000395073.2|FBRS|ENSG00000156860.11|fibrosin
hg19_v2_chr7_+_2636522_2636546	1.21348	GLI3	ENST00000423196.1|IQCE|ENSG00000106012.13|IQ motif containing E
hg19_v2_chr11_+_2482661_2482675	1.21211	GLI3	ENST00000335475.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr6_-_30181156_30181209	1.20806	GLI3	ENST00000418026.1|TRIM26|ENSG00000234127.4|tripartite motif containing 26 	ENST00000416596.1|TRIM26|ENSG00000234127.4|tripartite motif containing 26 	ENST00000453195.1|TRIM26|ENSG00000234127.4|tripartite motif containing 26
hg19_v2_chr6_+_147091575_147091715	1.20802	GLI3	ENST00000326916.8|ADGB|ENSG00000118492.12|androglobin 	ENST00000470716.2|ADGB|ENSG00000118492.12|androglobin 	ENST00000367488.1|ADGB|ENSG00000118492.12|androglobin
hg19_v2_chr10_-_105212141_105212183	1.19519	GLI3	ENST00000369788.3|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr16_-_18430593_18430593	1.18498	GLI3	ENST00000525596.1|NPIPA8|ENSG00000214940.4|nuclear pore complex interacting protein family, member A8
hg19_v2_chr2_+_233390863_233390878	1.18351	GLI3	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr22_-_23922410_23922446	1.18339	GLI3	ENST00000249053.3|IGLL1|ENSG00000128322.6|immunoglobulin lambda-like polypeptide 1
hg19_v2_chr19_+_7599597_7599642	1.18082	GLI3	ENST00000414982.3|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000450331.3|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr9_-_5304432_5304719	1.17642	GLI3	ENST00000416837.1|RLN2|ENSG00000107014.7|relaxin 2 	ENST00000308420.3|RLN2|ENSG00000107014.7|relaxin 2
hg19_v2_chr1_-_16563641_16563709	1.17461	GLI3	ENST00000375599.3|RSG1|ENSG00000132881.7|REM2 and RAB-like small GTPase 1
hg19_v2_chr17_-_27224621_27224759	1.17429	GLI3	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr12_-_7848364_7848378	1.17294	GLI3	ENST00000329913.3|GDF3|ENSG00000184344.3|growth differentiation factor 3
hg19_v2_chr8_+_124194752_124194835	1.17053	GLI3	ENST00000318462.6|FAM83A|ENSG00000147689.12|family with sequence similarity 83, member A
hg19_v2_chr4_-_90758227_90758379	1.16873	GLI3	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr19_+_44085189_44085189	1.16649	GLI3	ENST00000562365.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr1_+_150521876_150521901	1.16568	GLI3	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr19_+_51628165_51628165	1.16225	GLI3	ENST00000250360.3|SIGLEC9|ENSG00000129450.4|sialic acid binding Ig-like lectin 9 	ENST00000440804.3|SIGLEC9|ENSG00000129450.4|sialic acid binding Ig-like lectin 9
hg19_v2_chr17_+_73750699_73750793	1.16209	GLI3	ENST00000584939.1|ITGB4|ENSG00000132470.9|integrin, beta 4
hg19_v2_chr21_-_31311818_31312013	1.1605	GLI3	ENST00000535441.1|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1 	ENST00000309434.7|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1 	ENST00000327783.4|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1 	ENST00000389124.2|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1 	ENST00000389125.3|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1 	ENST00000399913.1|GRIK1|ENSG00000171189.12|glutamate receptor, ionotropic, kainate 1
hg19_v2_chr5_+_161275320_161275450	1.15143	GLI3	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr15_-_41120896_41120922	1.15032	GLI3	ENST00000299174.5|PPP1R14D|ENSG00000166143.5|protein phosphatase 1, regulatory (inhibitor) subunit 14D 	ENST00000427255.2|PPP1R14D|ENSG00000166143.5|protein phosphatase 1, regulatory (inhibitor) subunit 14D
hg19_v2_chr11_+_10477733_10477831	1.14148	GLI3	ENST00000528723.1|AMPD3|ENSG00000133805.11|adenosine monophosphate deaminase 3
hg19_v2_chr22_+_25003626_25003645	1.14015	GLI3	ENST00000451366.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000406383.2|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000428855.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1
hg19_v2_chr1_+_63788730_63788730	1.13825	GLI3	ENST00000371116.2|FOXD3|ENSG00000187140.4|forkhead box D3
hg19_v2_chr14_+_21423611_21423665	1.13722	GLI3	ENST00000304625.2|RNASE2|ENSG00000169385.2|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
hg19_v2_chr7_-_121784285_121784350	1.13623	GLI3	ENST00000417368.2|AASS|ENSG00000008311.10|aminoadipate-semialdehyde synthase
hg19_v2_chr2_+_20068628_20068661	1.1345	GLI3	ENST00000449086.1|LINC00954|ENSG00000228784.3|long intergenic non-protein coding RNA 954 	ENST00000456119.1|LINC00954|ENSG00000228784.3|long intergenic non-protein coding RNA 954 	ENST00000433669.1|LINC00954|ENSG00000228784.3|long intergenic non-protein coding RNA 954
hg19_v2_chr3_+_4535025_4535040	1.12851	GLI3	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chrX_-_138724677_138724887	1.12361	GLI3	ENST00000370573.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000338585.6|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000370576.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence
hg19_v2_chr15_+_31658349_31658358	1.11691	GLI3	ENST00000558844.1|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr19_-_43709817_43709926	1.11472	GLI3	ENST00000433626.2|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4 	ENST00000405312.3|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr20_-_50722183_50722217	1.10186	GLI3	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr16_+_2564254_2564305	1.10182	GLI3	ENST00000565223.1|ATP6V0C|ENSG00000185883.6|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v2_chr19_-_54804173_54804302	1.09702	GLI3	ENST00000391744.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 	ENST00000251390.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
hg19_v2_chr18_-_44544607_44544607	1.0951	GLI3	ENST00000591973.2|TCEB3CL2|ENSG00000266996.2|transcription elongation factor B polypeptide 3C-like 2
hg19_v2_chr1_+_207669613_207669686	1.09326	GLI3	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr11_+_1940925_1940955	1.08526	GLI3	ENST00000453458.1|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381557.2|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381589.3|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381579.3|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000381563.4|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast) 	ENST00000344578.4|TNNT3|ENSG00000130595.12|troponin T type 3 (skeletal, fast)
hg19_v2_chrX_+_153626571_153626627	1.08159	GLI3	ENST00000424325.2|RPL10|ENSG00000147403.12|ribosomal protein L10
hg19_v2_chr19_+_45147098_45147223	1.07152	GLI3	ENST00000425690.3|PVR|ENSG00000073008.10|poliovirus receptor 	ENST00000344956.4|PVR|ENSG00000073008.10|poliovirus receptor 	ENST00000403059.4|PVR|ENSG00000073008.10|poliovirus receptor
hg19_v2_chr4_+_40194609_40194616	1.0705	GLI3	ENST00000508513.1|RHOH|ENSG00000168421.8|ras homolog family member H
hg19_v2_chr12_+_32112340_32112358	1.06476	GLI3	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr12_+_52695617_52695649	1.05734	GLI3	ENST00000293525.5|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chr19_-_375970_375996	1.05688	GLI3	ENST00000346878.2|THEG|ENSG00000105549.6|theg spermatid protein
hg19_v2_chr1_+_15764931_15764945	1.05472	GLI3	ENST00000375949.4|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin) 	ENST00000375943.2|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin)
hg19_v2_chr5_-_39270725_39270771	1.05354	GLI3	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr9_+_5231413_5231425	1.0533	GLI3	ENST00000239316.4|INSL4|ENSG00000120211.4|insulin-like 4 (placenta)
hg19_v2_chr19_+_3721719_3721744	1.05152	GLI3	ENST00000589378.1|TJP3|ENSG00000105289.10|tight junction protein 3 	ENST00000382008.3|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr5_+_175490540_175490540	1.05064	GLI3	ENST00000515817.1|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chr3_-_187009646_187009778	1.04716	GLI3	ENST00000296280.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392470.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000169293.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000439271.1|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392472.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392475.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v2_chr11_-_117186946_117186981	1.04169	GLI3	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr16_-_71918033_71918107	1.04161	GLI3	ENST00000425432.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000313565.6|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000568666.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000562797.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000564134.1|ZNF821|ENSG00000102984.10|zinc finger protein 821
hg19_v2_chr17_-_4463856_4463896	1.04015	GLI3	ENST00000574584.1|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6 	ENST00000381550.3|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6 	ENST00000301395.3|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6
hg19_v2_chr2_+_20068606_20068626	1.03018	GLI3	ENST00000607100.1|LINC00954|ENSG00000228784.3|long intergenic non-protein coding RNA 954
hg19_v2_chr9_-_139891165_139891255	1.0285	GLI3	ENST00000494426.1|CLIC3|ENSG00000169583.12|chloride intracellular channel 3
hg19_v2_chr13_+_20532900_20532923	1.02214	GLI3	ENST00000382871.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr4_-_76861392_76861418	1.02192	GLI3	ENST00000505594.1|NAAA|ENSG00000138744.10|N-acylethanolamine acid amidase
hg19_v2_chr4_-_187476721_187476721	1.01741	GLI3	ENST00000307161.5|MTNR1A|ENSG00000168412.6|melatonin receptor 1A
hg19_v2_chr19_-_40596828_40596855	1.01351	GLI3	ENST00000414720.2|ZNF780A|ENSG00000197782.10|zinc finger protein 780A 	ENST00000455521.1|ZNF780A|ENSG00000197782.10|zinc finger protein 780A 	ENST00000340963.5|ZNF780A|ENSG00000197782.10|zinc finger protein 780A 	ENST00000595773.1|ZNF780A|ENSG00000197782.10|zinc finger protein 780A
hg19_v2_chr11_+_60739249_60739338	1.00084	GLI3	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr4_-_170948361_170948375	0.998959	GLI3	ENST00000393702.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr7_+_100187196_100187252	0.991805	GLI3	ENST00000468962.1|FBXO24|ENSG00000106336.8|F-box protein 24 	ENST00000427939.2|FBXO24|ENSG00000106336.8|F-box protein 24
hg19_v2_chr19_-_40324255_40324296	0.991458	GLI3	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr16_+_56691606_56691719	0.98912	GLI3	ENST00000334350.6|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr5_-_40798263_40798300	0.988744	GLI3	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr5_-_58571935_58571951	0.98821	GLI3	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr19_+_30863271_30863338	0.983174	GLI3	ENST00000355537.3|ZNF536|ENSG00000198597.4|zinc finger protein 536
hg19_v2_chr4_-_46391367_46391436	0.982484	GLI3	ENST00000503806.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000356504.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000514090.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000506961.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2
hg19_v2_chr16_+_56691911_56691929	0.979907	GLI3	ENST00000568475.1|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr11_+_89867681_89867697	0.979111	GLI3	ENST00000534061.1|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2
hg19_v2_chr19_-_11689752_11689801	0.974364	GLI3	ENST00000592659.1|ACP5|ENSG00000102575.6|acid phosphatase 5, tartrate resistant 	ENST00000592828.1|ACP5|ENSG00000102575.6|acid phosphatase 5, tartrate resistant 	ENST00000218758.5|ACP5|ENSG00000102575.6|acid phosphatase 5, tartrate resistant 	ENST00000412435.2|ACP5|ENSG00000102575.6|acid phosphatase 5, tartrate resistant
hg19_v2_chr11_-_65374430_65374497	0.97037	GLI3	ENST00000532507.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr19_+_58978463_58978476	0.970105	GLI3	ENST00000196482.3|ZNF324|ENSG00000083812.7|zinc finger protein 324
hg19_v2_chr16_+_84682108_84682218	0.968897	GLI3	ENST00000564996.1|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000258157.5|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000567410.1|KLHL36|ENSG00000135686.8|kelch-like family member 36
hg19_v2_chr19_+_9434841_9435021	0.965695	GLI3	ENST00000446085.4|ZNF177|ENSG00000270011.2|ZNF559-ZNF177 readthrough 	ENST00000592504.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000585352.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000317221.7|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000586255.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000592896.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000605750.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000603380.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000538743.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000589208.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000592298.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000585377.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000393883.2|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000603656.1|ZNF177|ENSG00000270011.2|ZNF559-ZNF177 readthrough 	ENST00000588124.1|ZNF559|ENSG00000188321.9|zinc finger protein 559 	ENST00000541595.2|ZNF177|ENSG00000270011.2|ZNF559-ZNF177 readthrough 	ENST00000602738.1|ZNF177|ENSG00000188629.7|zinc finger protein 177
hg19_v2_chr17_+_73084038_73084081	0.960134	GLI3	ENST00000578376.1|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5 	ENST00000329783.4|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5
hg19_v2_chr14_-_101295407_101295537	0.956072	GLI3	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr12_-_4554780_4554780	0.956019	GLI3	ENST00000228837.2|FGF6|ENSG00000111241.2|fibroblast growth factor 6
hg19_v2_chr6_-_2903514_2903552	0.952858	GLI3	ENST00000380698.4|SERPINB9|ENSG00000170542.5|serpin peptidase inhibitor, clade B (ovalbumin), member 9
hg19_v2_chr20_-_39946237_39946356	0.951561	GLI3	ENST00000441102.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000559234.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr22_+_39436862_39436924	0.942505	GLI3	ENST00000381565.2|APOBEC3F|ENSG00000128394.12|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F 	ENST00000452957.2|APOBEC3G|ENSG00000239713.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
hg19_v2_chr8_-_38386175_38386180	0.939035	GLI3	ENST00000437935.2|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86 	ENST00000358138.1|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86
hg19_v2_chr1_+_170904612_170904677	0.938101	GLI3	ENST00000367759.4|MROH9|ENSG00000117501.10|maestro heat-like repeat family member 9 	ENST00000367758.3|MROH9|ENSG00000117501.10|maestro heat-like repeat family member 9
hg19_v2_chr7_-_24797546_24797732	0.937002	GLI3	ENST00000414428.1|DFNA5|ENSG00000105928.9|deafness, autosomal dominant 5 	ENST00000419307.1|DFNA5|ENSG00000105928.9|deafness, autosomal dominant 5 	ENST00000342947.3|DFNA5|ENSG00000105928.9|deafness, autosomal dominant 5
hg19_v2_chr1_-_1310870_1310920	0.934078	GLI3	ENST00000338338.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr17_-_40540484_40540537	0.933768	GLI3	ENST00000588969.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr3_-_38691119_38691203	0.93326	GLI3	ENST00000333535.4|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000413689.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000443581.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000425664.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000451551.2|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit
hg19_v2_chr6_-_166582107_166582188	0.93308	GLI3	ENST00000296946.2|T|ENSG00000164458.5|T, brachyury homolog (mouse) 	ENST00000461348.2|T|ENSG00000164458.5|T, brachyury homolog (mouse) 	ENST00000366871.3|T|ENSG00000164458.5|T, brachyury homolog (mouse)
hg19_v2_chr3_-_48130707_48130789	0.931618	GLI3	ENST00000360240.6|MAP4|ENSG00000047849.17|microtubule-associated protein 4 	ENST00000383737.4|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr19_-_40791302_40791443	0.930472	GLI3	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr7_+_142985308_142985453	0.928975	GLI3	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr2_+_70314579_70314590	0.927647	GLI3	ENST00000303577.5|PCBP1|ENSG00000169564.5|poly(rC) binding protein 1
hg19_v2_chr16_+_68679193_68679253	0.926665	GLI3	ENST00000581171.1|CDH3|ENSG00000062038.9|cadherin 3, type 1, P-cadherin (placental)
hg19_v2_chr15_-_74659978_74660081	0.92578	GLI3	ENST00000541301.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000416978.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000268053.6|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v2_chr16_+_29984962_29984962	0.92325	GLI3	ENST00000308893.4|TAOK2|ENSG00000149930.13|TAO kinase 2
hg19_v2_chr10_-_27389320_27389384	0.918391	GLI3	ENST00000436985.2|ANKRD26|ENSG00000107890.12|ankyrin repeat domain 26
hg19_v2_chr7_+_45928079_45928096	0.907438	GLI3	ENST00000468955.1|IGFBP1|ENSG00000146678.5|insulin-like growth factor binding protein 1
hg19_v2_chr4_-_177713788_177713881	0.895992	GLI3	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr2_+_171673072_171673225	0.895581	GLI3	ENST00000358196.3|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa) 	ENST00000375272.1|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa)
hg19_v2_chr1_-_1051736_1051754	0.894822	GLI3	ENST00000448924.1|C1orf159|ENSG00000131591.13|chromosome 1 open reading frame 159 	ENST00000294576.5|C1orf159|ENSG00000131591.13|chromosome 1 open reading frame 159 	ENST00000437760.1|C1orf159|ENSG00000131591.13|chromosome 1 open reading frame 159 	ENST00000462097.1|C1orf159|ENSG00000131591.13|chromosome 1 open reading frame 159 	ENST00000475119.1|C1orf159|ENSG00000131591.13|chromosome 1 open reading frame 159
hg19_v2_chr22_+_22764088_22764105	0.893453	GLI3	ENST00000390299.2|IGLV1-40|ENSG00000211653.2|immunoglobulin lambda variable 1-40
hg19_v2_chr11_-_113346111_113346125	0.891033	GLI3	ENST00000362072.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr1_+_152881014_152881031	0.889957	GLI3	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr6_-_53213587_53213772	0.887775	GLI3	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr17_-_17942473_17942523	0.880608	GLI3	ENST00000585101.1|ATPAF2|ENSG00000171953.11|ATP synthase mitochondrial F1 complex assembly factor 2 	ENST00000474627.3|ATPAF2|ENSG00000171953.11|ATP synthase mitochondrial F1 complex assembly factor 2 	ENST00000444058.1|ATPAF2|ENSG00000171953.11|ATP synthase mitochondrial F1 complex assembly factor 2
hg19_v2_chr15_+_75105170_75105194	0.878798	GLI3	ENST00000379709.3|LMAN1L|ENSG00000140506.12|lectin, mannose-binding, 1 like
hg19_v2_chr15_-_102192567_102192597	0.86296	GLI3	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr17_-_3819751_3819794	0.854896	GLI3	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chr5_-_180076580_180076605	0.85434	GLI3	ENST00000502649.1|FLT4|ENSG00000037280.11|fms-related tyrosine kinase 4
hg19_v2_chr10_+_11060004_11060106	0.847479	GLI3	ENST00000542579.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000399850.3|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000417956.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr7_+_33169142_33169185	0.847378	GLI3	ENST00000242067.6|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9 	ENST00000350941.3|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9 	ENST00000396127.2|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9 	ENST00000355070.2|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9 	ENST00000354265.4|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9 	ENST00000425508.2|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9
hg19_v2_chr16_-_2004683_2004727	0.844293	GLI3	ENST00000268661.7|RPL3L|ENSG00000140986.7|ribosomal protein L3-like
hg19_v2_chr21_+_34697209_34697245	0.820615	GLI3	ENST00000270139.3|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chr15_-_78526942_78527049	0.817923	GLI3	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr12_-_117537240_117537274	0.814426	GLI3	ENST00000392545.4|TESC|ENSG00000088992.13|tescalcin 	ENST00000541210.1|TESC|ENSG00000088992.13|tescalcin 	ENST00000335209.7|TESC|ENSG00000088992.13|tescalcin
hg19_v2_chr17_-_33814851_33814890	0.812807	GLI3	ENST00000449046.1|SLFN12L|ENSG00000205045.4|schlafen family member 12-like 	ENST00000260908.7|SLFN12L|ENSG00000205045.4|schlafen family member 12-like
hg19_v2_chr20_+_42984330_42984445	0.809306	GLI3	ENST00000316673.4|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000609795.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000457232.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000609262.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha
hg19_v2_chr2_-_68694390_68694434	0.803443	GLI3	ENST00000377957.3|FBXO48|ENSG00000204923.3|F-box protein 48
hg19_v2_chr10_-_52383644_52383743	0.800955	GLI3	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr22_+_50925213_50925305	0.799069	GLI3	ENST00000395733.3|MIOX|ENSG00000100253.8|myo-inositol oxygenase 	ENST00000216075.6|MIOX|ENSG00000100253.8|myo-inositol oxygenase 	ENST00000395732.3|MIOX|ENSG00000100253.8|myo-inositol oxygenase
hg19_v2_chr8_-_41655107_41655159	0.796907	GLI3	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr9_+_132962843_132962872	0.79662	GLI3	ENST00000458469.1|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr12_-_2944184_2944209	0.791799	GLI3	ENST00000337508.4|NRIP2|ENSG00000053702.10|nuclear receptor interacting protein 2
hg19_v2_chr16_+_89787937_89787971	0.791027	GLI3	ENST00000443381.2|ZNF276|ENSG00000158805.7|zinc finger protein 276
hg19_v2_chr16_+_56691838_56691862	0.789651	GLI3	ENST00000394501.2|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr3_+_136537911_136538003	0.786255	GLI3	ENST00000393079.3|SLC35G2|ENSG00000168917.8|solute carrier family 35, member G2
hg19_v2_chr1_-_227922934_227923112	0.785	GLI3	ENST00000366758.3|JMJD4|ENSG00000081692.8|jumonji domain containing 4 	ENST00000438896.2|JMJD4|ENSG00000081692.8|jumonji domain containing 4
hg19_v2_chr9_+_87285257_87285311	0.784418	GLI3	ENST00000323115.4|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr22_-_50708781_50708852	0.783854	GLI3	ENST00000449719.2|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11 	ENST00000330651.6|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11
hg19_v2_chr22_+_41487711_41487798	0.778221	GLI3	ENST00000263253.7|EP300|ENSG00000100393.9|E1A binding protein p300
hg19_v2_chr13_-_20437772_20437802	0.77574	GLI3	ENST00000337963.4|ZMYM5|ENSG00000132950.14|zinc finger, MYM-type 5
hg19_v2_chr13_+_27825706_27825741	0.775628	GLI3	ENST00000272274.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000319826.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000326092.4|RPL21|ENSG00000122026.6|ribosomal protein L21
hg19_v2_chr10_+_52750930_52750950	0.775454	GLI3	ENST00000401604.2|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr11_+_64052692_64052747	0.775272	GLI3	ENST00000377702.4|GPR137|ENSG00000173264.9|G protein-coupled receptor 137
hg19_v2_chr12_+_7055631_7055748	0.771817	GLI3	ENST00000543115.1|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6 	ENST00000399448.1|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6
hg19_v2_chr11_-_119991589_119991609	0.767929	GLI3	ENST00000526881.1|TRIM29|ENSG00000137699.12|tripartite motif containing 29
hg19_v2_chr12_+_57853918_57853934	0.767168	GLI3	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr3_-_137851220_137851236	0.761022	GLI3	ENST00000236709.3|A4GNT|ENSG00000118017.3|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr14_-_106478603_106478603	0.76065	GLI3	ENST00000390596.2|IGHV4-4|ENSG00000211936.2|immunoglobulin heavy variable 4-4
hg19_v2_chr17_+_73996987_73996987	0.756215	GLI3	ENST00000588812.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3 	ENST00000448471.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3
hg19_v2_chr2_-_27851843_27851885	0.754033	GLI3	ENST00000324364.3|CCDC121|ENSG00000176714.9|coiled-coil domain containing 121
hg19_v2_chr19_-_18366182_18366229	0.751074	GLI3	ENST00000355502.3|PDE4C|ENSG00000105650.17|phosphodiesterase 4C, cAMP-specific
hg19_v2_chr19_-_52489923_52490113	0.74974	GLI3	ENST00000593596.1|ZNF350|ENSG00000256683.2|zinc finger protein 350 	ENST00000243644.4|ZNF350|ENSG00000256683.2|zinc finger protein 350 	ENST00000594929.1|ZNF350|ENSG00000256683.2|zinc finger protein 350 	ENST00000601430.1|ZNF350|ENSG00000256683.2|zinc finger protein 350
hg19_v2_chr19_+_17337473_17337549	0.741085	GLI3	ENST00000598068.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr17_+_18996287_18996287	0.739884	GLI3	ENST00000399091.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000443876.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000428928.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042
hg19_v2_chr1_+_55464600_55464608	0.737429	GLI3	ENST00000371265.4|BSND|ENSG00000162399.6|Bartter syndrome, infantile, with sensorineural deafness (Barttin)
hg19_v2_chr3_+_16926441_16926463	0.726748	GLI3	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr5_-_180242534_180242567	0.725267	GLI3	ENST00000333055.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 	ENST00000513431.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr1_+_150122034_150122170	0.724153	GLI3	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr3_-_38178527_38178632	0.722192	GLI3	ENST00000544624.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000444607.2|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000450296.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1
hg19_v2_chr1_-_161600822_161600923	0.714932	GLI3	ENST00000534776.1|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b) 	ENST00000540048.1|FCGR3A|ENSG00000203747.5|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
hg19_v2_chr1_+_10490127_10490159	0.713512	GLI3	ENST00000602787.1|APITD1|ENSG00000175279.17|apoptosis-inducing, TAF9-like domain 1 	ENST00000602296.1|APITD1|ENSG00000175279.17|apoptosis-inducing, TAF9-like domain 1 	ENST00000400900.2|APITD1-CORT|ENSG00000251503.3|APITD1-CORT readthrough
hg19_v2_chr11_-_407103_407195	0.7112	GLI3	ENST00000526395.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr17_-_40540586_40540600	0.710613	GLI3	ENST00000264657.5|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr12_-_13529642_13529664	0.705804	GLI3	ENST00000318426.2|C12orf36|ENSG00000180861.5|chromosome 12 open reading frame 36
hg19_v2_chr14_+_104095514_104095634	0.704186	GLI3	ENST00000348520.6|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000380038.3|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000389744.4|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000557575.1|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000553286.1|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000347839.6|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000555836.1|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000334553.6|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000246489.7|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000557450.1|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000452929.2|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000554280.1|KLC1|ENSG00000126214.16|kinesin light chain 1 	ENST00000445352.4|KLC1|ENSG00000126214.16|kinesin light chain 1
hg19_v2_chr5_-_169816638_169816681	0.703015	GLI3	ENST00000521859.1|KCNMB1|ENSG00000145936.4|potassium large conductance calcium-activated channel, subfamily M, beta member 1 	ENST00000274629.4|KCNMB1|ENSG00000145936.4|potassium large conductance calcium-activated channel, subfamily M, beta member 1
hg19_v2_chr6_-_80657292_80657301	0.697454	GLI3	ENST00000369816.4|ELOVL4|ENSG00000118402.5|ELOVL fatty acid elongase 4
hg19_v2_chr1_-_212873267_212873332	0.691717	GLI3	ENST00000243440.1|BATF3|ENSG00000123685.4|basic leucine zipper transcription factor, ATF-like 3
hg19_v2_chr9_+_131873659_131873714	0.689364	GLI3	ENST00000452489.2|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000347048.4|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000357197.4|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000445241.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000355007.3|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000414331.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4
hg19_v2_chr7_+_1126461_1126512	0.684857	GLI3	ENST00000297469.3|GPER1|ENSG00000164850.10|G protein-coupled estrogen receptor 1
hg19_v2_chr10_-_6104253_6104288	0.682522	GLI3	ENST00000256876.6|IL2RA|ENSG00000134460.11|interleukin 2 receptor, alpha 	ENST00000379954.1|IL2RA|ENSG00000134460.11|interleukin 2 receptor, alpha 	ENST00000379959.3|IL2RA|ENSG00000134460.11|interleukin 2 receptor, alpha
hg19_v2_chr5_-_9546180_9546195	0.682439	GLI3	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr2_-_48982708_48982837	0.681632	GLI3	ENST00000428232.1|LHCGR|ENSG00000138039.10|luteinizing hormone/choriogonadotropin receptor 	ENST00000405626.1|LHCGR|ENSG00000138039.10|luteinizing hormone/choriogonadotropin receptor 	ENST00000294954.7|LHCGR|ENSG00000138039.10|luteinizing hormone/choriogonadotropin receptor
hg19_v2_chr3_-_32612263_32612366	0.674611	GLI3	ENST00000432458.2|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1 	ENST00000424991.1|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1 	ENST00000273130.4|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1
hg19_v2_chr22_-_23922448_23922495	0.672825	GLI3	ENST00000438703.1|IGLL1|ENSG00000128322.6|immunoglobulin lambda-like polypeptide 1 	ENST00000330377.2|IGLL1|ENSG00000128322.6|immunoglobulin lambda-like polypeptide 1
hg19_v2_chr11_-_46615498_46615675	0.671837	GLI3	ENST00000533727.1|AMBRA1|ENSG00000110497.10|autophagy/beclin-1 regulator 1 	ENST00000534300.1|AMBRA1|ENSG00000110497.10|autophagy/beclin-1 regulator 1 	ENST00000528950.1|AMBRA1|ENSG00000110497.10|autophagy/beclin-1 regulator 1 	ENST00000526606.1|AMBRA1|ENSG00000110497.10|autophagy/beclin-1 regulator 1
hg19_v2_chr1_+_15802594_15802601	0.666181	GLI3	ENST00000375910.3|CELA2B|ENSG00000215704.5|chymotrypsin-like elastase family, member 2B
hg19_v2_chr1_-_55266865_55266876	0.666114	GLI3	ENST00000371274.4|TTC22|ENSG00000006555.6|tetratricopeptide repeat domain 22
hg19_v2_chr7_-_44180884_44180937	0.665666	GLI3	ENST00000458240.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000223364.3|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr19_-_23578220_23578362	0.663586	GLI3	ENST00000595533.1|ZNF91|ENSG00000167232.9|zinc finger protein 91 	ENST00000397082.2|ZNF91|ENSG00000167232.9|zinc finger protein 91 	ENST00000599743.1|ZNF91|ENSG00000167232.9|zinc finger protein 91 	ENST00000300619.7|ZNF91|ENSG00000167232.9|zinc finger protein 91
hg19_v2_chr16_+_75256507_75256511	0.661588	GLI3	ENST00000495583.1|CTRB1|ENSG00000168925.6|chymotrypsinogen B1
hg19_v2_chr19_+_46195895_46195959	0.661208	GLI3	ENST00000366382.4|QPCTL|ENSG00000011478.7|glutaminyl-peptide cyclotransferase-like
hg19_v2_chr20_+_33814457_33814506	0.656734	GLI3	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr1_+_179262905_179262986	0.650629	GLI3	ENST00000539888.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000540564.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000535686.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000367619.3|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1
hg19_v2_chr6_-_35480640_35480653	0.646827	GLI3	ENST00000428978.1|TULP1|ENSG00000112041.8|tubby like protein 1 	ENST00000322263.4|TULP1|ENSG00000112041.8|tubby like protein 1
hg19_v2_chr9_-_98279241_98279339	0.643984	GLI3	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr12_+_125549925_125549956	0.642377	GLI3	ENST00000316519.6|AACS|ENSG00000081760.12|acetoacetyl-CoA synthetase
hg19_v2_chr16_-_86588627_86588848	0.642107	GLI3	ENST00000565482.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000564364.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000561989.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000543303.2|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000381214.5|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000360900.6|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000322911.6|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000546093.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000569000.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000562994.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing 	ENST00000561522.1|MTHFSD|ENSG00000103248.13|methenyltetrahydrofolate synthetase domain containing
hg19_v2_chr20_+_39765581_39765646	0.637523	GLI3	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr21_+_47268058_47268079	0.636447	GLI3	ENST00000400310.1|PCBP3|ENSG00000183570.12|poly(rC) binding protein 3
hg19_v2_chr20_+_49411543_49411635	0.636444	GLI3	ENST00000609336.1|BCAS4|ENSG00000124243.13|breast carcinoma amplified sequence 4 	ENST00000445038.1|BCAS4|ENSG00000124243.13|breast carcinoma amplified sequence 4
hg19_v2_chr19_+_35820064_35820115	0.630661	GLI3	ENST00000341773.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600131.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000270311.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000595780.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000597916.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000593867.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600424.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000599811.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000536635.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000085219.5|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000544992.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000419549.2|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr22_-_21482046_21482046	0.630262	GLI3	ENST00000419447.1|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr8_-_86290333_86290348	0.62872	GLI3	ENST00000521846.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523022.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000524324.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519991.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000520663.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517590.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522579.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522814.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522662.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523858.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519129.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr8_+_90914073_90914087	0.625761	GLI3	ENST00000297438.2|OSGIN2|ENSG00000164823.5|oxidative stress induced growth inhibitor family member 2
hg19_v2_chr8_-_29120580_29120596	0.622234	GLI3	ENST00000524189.1|KIF13B|ENSG00000197892.8|kinesin family member 13B
hg19_v2_chr17_-_7137582_7137637	0.621914	GLI3	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr13_+_100741269_100741377	0.615779	GLI3	ENST00000376286.4|PCCA|ENSG00000175198.10|propionyl CoA carboxylase, alpha polypeptide 	ENST00000376279.3|PCCA|ENSG00000175198.10|propionyl CoA carboxylase, alpha polypeptide 	ENST00000376285.1|PCCA|ENSG00000175198.10|propionyl CoA carboxylase, alpha polypeptide
hg19_v2_chr6_+_43739697_43739752	0.609012	GLI3	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chrX_-_52260355_52260363	0.606822	GLI3	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr7_-_44180673_44180687	0.606494	GLI3	ENST00000457314.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000447951.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000431007.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr14_-_106068065_106068065	0.603927	GLI3	ENST00000390541.2|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr9_+_131873591_131873622	0.597325	GLI3	ENST00000393370.2|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000337738.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4 	ENST00000348141.5|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4
hg19_v2_chr12_-_108714412_108714446	0.591911	GLI3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chr1_+_1950763_1950815	0.59031	GLI3	ENST00000378585.4|GABRD|ENSG00000187730.6|gamma-aminobutyric acid (GABA) A receptor, delta
hg19_v2_chr10_-_62761188_62761212	0.586272	GLI3	ENST00000357917.4|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr10_+_30722866_30722969	0.574899	GLI3	ENST00000263056.1|MAP3K8|ENSG00000107968.5|mitogen-activated protein kinase kinase kinase 8
hg19_v2_chr12_+_99038998_99039078	0.573624	GLI3	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr1_-_201368707_201368760	0.570287	GLI3	ENST00000391967.2|LAD1|ENSG00000159166.9|ladinin 1
hg19_v2_chr14_+_76044934_76044982	0.569546	GLI3	ENST00000238667.4|FLVCR2|ENSG00000119686.5|feline leukemia virus subgroup C cellular receptor family, member 2
hg19_v2_chr19_-_51522955_51523020	0.567066	GLI3	ENST00000358789.3|KLK10|ENSG00000129451.7|kallikrein-related peptidase 10
hg19_v2_chrX_+_2984874_2984874	0.564573	GLI3	ENST00000359361.2|ARSF|ENSG00000062096.10|arylsulfatase F
hg19_v2_chr17_+_46184911_46184951	0.563784	GLI3	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr10_-_105615164_105615323	0.555172	GLI3	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr19_-_44124019_44124030	0.55397	GLI3	ENST00000300811.3|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr11_-_47198380_47198448	0.552738	GLI3	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr1_-_157108130_157108173	0.550919	GLI3	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr10_-_79398250_79398353	0.549034	GLI3	ENST00000286627.5|KCNMA1|ENSG00000156113.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v2_chr9_-_132404374_132404450	0.547685	GLI3	ENST00000277459.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000450050.2|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000277458.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6
hg19_v2_chr14_+_103592636_103592664	0.544663	GLI3	ENST00000333007.1|TNFAIP2|ENSG00000185215.4|tumor necrosis factor, alpha-induced protein 2
hg19_v2_chr5_+_23951673_23951673	0.536439	GLI3	ENST00000507936.1|C5orf17|ENSG00000248874.1|chromosome 5 open reading frame 17
hg19_v2_chr9_-_130639997_130640022	0.535642	GLI3	ENST00000373176.1|AK1|ENSG00000106992.13|adenylate kinase 1
hg19_v2_chr11_-_8985927_8986008	0.53239	GLI3	ENST00000528117.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B 	ENST00000309134.5|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr1_-_85358850_85358906	0.530752	GLI3	ENST00000370611.3|LPAR3|ENSG00000171517.5|lysophosphatidic acid receptor 3
hg19_v2_chr17_-_18161870_18162084	0.527415	GLI3	ENST00000579294.1|FLII|ENSG00000177731.11|flightless I homolog (Drosophila) 	ENST00000545457.2|FLII|ENSG00000177731.11|flightless I homolog (Drosophila) 	ENST00000379450.4|FLII|ENSG00000177731.11|flightless I homolog (Drosophila) 	ENST00000578558.1|FLII|ENSG00000177731.11|flightless I homolog (Drosophila)
hg19_v2_chr16_+_57653854_57653968	0.5243	GLI3	ENST00000568908.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568909.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566778.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000561988.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr3_-_128902729_128902753	0.519709	GLI3	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr9_+_103204553_103204560	0.516042	GLI3	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr8_-_145653885_145653937	0.515833	GLI3	ENST00000531032.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000292510.4|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000377348.2|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000530790.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000533806.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr15_-_78526855_78526916	0.513578	GLI3	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr12_+_6308881_6309041	0.50666	GLI3	ENST00000382518.1|CD9|ENSG00000010278.7|CD9 molecule 	ENST00000536586.1|CD9|ENSG00000010278.7|CD9 molecule
hg19_v2_chr1_+_209757051_209757074	0.504351	GLI3	ENST00000009105.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000423146.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000361322.2|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG
hg19_v2_chr8_-_145652336_145652378	0.490258	GLI3	ENST00000529182.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000526054.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr1_-_160549235_160549306	0.487971	GLI3	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr22_+_39353527_39353623	0.487176	GLI3	ENST00000249116.2|APOBEC3A|ENSG00000128383.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A
hg19_v2_chr2_-_17935059_17935102	0.486052	GLI3	ENST00000448223.2|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6 	ENST00000381272.4|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6 	ENST00000351948.4|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6
hg19_v2_chr16_+_89979826_89979826	0.485427	GLI3	ENST00000555427.1|MC1R|ENSG00000258839.2|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
hg19_v2_chr2_+_128175997_128176020	0.483087	GLI3	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr19_+_44220247_44220265	0.481974	GLI3	ENST00000596627.1|IRGC|ENSG00000124449.6|immunity-related GTPase family, cinema
hg19_v2_chrX_+_107334895_107334934	0.480772	GLI3	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr5_-_37249397_37249530	0.472853	GLI3	ENST00000425232.2|C5orf42|ENSG00000197603.9|chromosome 5 open reading frame 42 	ENST00000274258.7|C5orf42|ENSG00000197603.9|chromosome 5 open reading frame 42
hg19_v2_chr6_-_46620522_46620560	0.470262	GLI3	ENST00000275016.2|CYP39A1|ENSG00000146233.3|cytochrome P450, family 39, subfamily A, polypeptide 1
hg19_v2_chr4_+_119606523_119606570	0.468887	GLI3	ENST00000388822.5|METTL14|ENSG00000145388.10|methyltransferase like 14 	ENST00000506780.1|METTL14|ENSG00000145388.10|methyltransferase like 14 	ENST00000508801.1|METTL14|ENSG00000145388.10|methyltransferase like 14
hg19_v2_chr12_-_57940904_57941002	0.465738	GLI3	ENST00000550954.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000434715.3|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000546670.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000543672.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50)
hg19_v2_chr19_+_7733929_7733950	0.465632	GLI3	ENST00000221515.2|RETN|ENSG00000104918.4|resistin
hg19_v2_chr11_-_64511575_64511650	0.459876	GLI3	ENST00000431822.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated) 	ENST00000377486.3|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated) 	ENST00000394432.3|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated)
hg19_v2_chr3_-_58196939_58196956	0.452693	GLI3	ENST00000394549.2|DNASE1L3|ENSG00000163687.9|deoxyribonuclease I-like 3 	ENST00000461914.3|DNASE1L3|ENSG00000163687.9|deoxyribonuclease I-like 3
hg19_v2_chr19_+_58125580_58125639	0.452658	GLI3	ENST00000600344.1|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000396161.5|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000600883.1|ZNF134|ENSG00000213762.6|zinc finger protein 134
hg19_v2_chr12_+_130646999_130647019	0.447462	GLI3	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr19_-_11494975_11495003	0.441368	GLI3	ENST00000222139.6|EPOR|ENSG00000187266.9|erythropoietin receptor 	ENST00000592375.2|EPOR|ENSG00000187266.9|erythropoietin receptor
hg19_v2_chr19_+_17337007_17337018	0.440556	GLI3	ENST00000215061.4|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr11_+_73588014_73588073	0.439429	GLI3	ENST00000310571.3|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000504441.2|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000543814.1|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000535604.1|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000542293.1|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000536003.1|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1 	ENST00000544552.1|PAAF1|ENSG00000175575.8|proteasomal ATPase-associated factor 1
hg19_v2_chr17_-_19062424_19062424	0.439379	GLI3	ENST00000399083.1|AC007952.6|ENSG00000197665.5|Uncharacterized protein
hg19_v2_chrX_+_72667090_72667090	0.438521	GLI3	ENST00000373514.2|CDX4|ENSG00000131264.3|caudal type homeobox 4
hg19_v2_chr6_-_31324943_31324965	0.432357	GLI3	ENST00000412585.2|HLA-B|ENSG00000234745.5|major histocompatibility complex, class I, B 	ENST00000434333.1|HLA-B|ENSG00000234745.5|major histocompatibility complex, class I, B
hg19_v2_chr16_-_18470696_18470696	0.428477	GLI3	ENST00000427999.2|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr8_+_94752349_94752349	0.424933	GLI3	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr1_+_202431859_202431871	0.421677	GLI3	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chrX_+_1733876_1733894	0.4216	GLI3	ENST00000381241.3|ASMT|ENSG00000196433.7|acetylserotonin O-methyltransferase
hg19_v2_chr1_+_202995611_202995680	0.420018	GLI3	ENST00000367240.2|PPFIA4|ENSG00000143847.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
hg19_v2_chr11_+_1718425_1718425	0.41638	GLI3	ENST00000382160.1|KRTAP5-6|ENSG00000205864.1|keratin associated protein 5-6
hg19_v2_chr19_-_49552006_49552006	0.413857	GLI3	ENST00000391869.3|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1
hg19_v2_chr1_+_209941827_209941837	0.401641	GLI3	ENST00000367023.1|TRAF3IP3|ENSG00000009790.10|TRAF3 interacting protein 3
hg19_v2_chr2_+_233390890_233390903	0.397622	GLI3	ENST00000258385.3|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000536614.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000457943.2|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr1_+_10509971_10510095	0.385618	GLI3	ENST00000320498.4|CORT|ENSG00000241563.2|cortistatin
hg19_v2_chr3_-_196756646_196756725	0.383047	GLI3	ENST00000439320.1|MFI2|ENSG00000163975.7|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 	ENST00000296351.4|MFI2|ENSG00000163975.7|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 	ENST00000296350.5|MFI2|ENSG00000163975.7|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
hg19_v2_chr22_+_45559722_45559881	0.372284	GLI3	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr22_+_26565440_26565624	0.370774	GLI3	ENST00000404234.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000529632.2|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000360929.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000248933.6|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000343706.4|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like
hg19_v2_chr17_+_4835580_4835593	0.362508	GLI3	ENST00000329125.5|GP1BA|ENSG00000185245.6|glycoprotein Ib (platelet), alpha polypeptide
hg19_v2_chr16_-_4817129_4817219	0.36214	GLI3	ENST00000545009.1|ZNF500|ENSG00000103199.9|zinc finger protein 500 	ENST00000219478.6|ZNF500|ENSG00000103199.9|zinc finger protein 500
hg19_v2_chr6_-_26027480_26027522	0.361874	GLI3	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr19_+_11350278_11350302	0.35007	GLI3	ENST00000252453.8|C19orf80|ENSG00000130173.9|chromosome 19 open reading frame 80
hg19_v2_chr3_+_14166440_14166541	0.346797	GLI3	ENST00000306077.4|TMEM43|ENSG00000170876.7|transmembrane protein 43
hg19_v2_chr3_-_171528227_171528298	0.346443	GLI3	ENST00000356327.5|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific 	ENST00000342215.6|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific 	ENST00000340989.4|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific 	ENST00000351298.4|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific
hg19_v2_chrX_-_48693955_48694035	0.343449	GLI3	ENST00000218230.5|PCSK1N|ENSG00000102109.7|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v2_chr2_+_238767517_238767539	0.338615	GLI3	ENST00000404910.2|RAMP1|ENSG00000132329.6|receptor (G protein-coupled) activity modifying protein 1
hg19_v2_chr1_-_155177677_155177739	0.338019	GLI3	ENST00000368378.3|THBS3|ENSG00000169231.9|thrombospondin 3 	ENST00000541990.1|THBS3|ENSG00000169231.9|thrombospondin 3 	ENST00000457183.2|THBS3|ENSG00000169231.9|thrombospondin 3
hg19_v2_chr22_+_31523734_31523788	0.337438	GLI3	ENST00000402238.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000404453.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000401755.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J
hg19_v2_chr7_+_1126437_1126458	0.326197	GLI3	ENST00000413368.1|GPER1|ENSG00000164850.10|G protein-coupled estrogen receptor 1 	ENST00000397092.1|GPER1|ENSG00000164850.10|G protein-coupled estrogen receptor 1
hg19_v2_chr12_+_50366620_50366735	0.325558	GLI3	ENST00000315520.5|AQP6|ENSG00000086159.8|aquaporin 6, kidney specific
hg19_v2_chr12_-_57410304_57410325	0.325489	GLI3	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr4_+_148402069_148402099	0.324373	GLI3	ENST00000358556.4|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000339690.5|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000511804.1|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000324300.5|EDNRA|ENSG00000151617.11|endothelin receptor type A
hg19_v2_chr1_+_87170247_87170276	0.317963	GLI3	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chr17_-_46692287_46692317	0.317373	GLI3	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr16_-_22385901_22385947	0.31692	GLI3	ENST00000268383.2|CDR2|ENSG00000140743.3|cerebellar degeneration-related protein 2, 62kDa
hg19_v2_chr14_+_71374433_71374456	0.313279	GLI3	ENST00000439984.3|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr11_+_124735282_124735332	0.309114	GLI3	ENST00000397801.1|ROBO3|ENSG00000154134.10|roundabout, axon guidance receptor, homolog 3 (Drosophila)
hg19_v2_chr18_-_44550534_44550534	0.308399	GLI3	ENST00000451265.1|TCEB3CL|ENSG00000234298.1|transcription elongation factor B polypeptide 3C-like
hg19_v2_chr3_+_156008809_156008839	0.305457	GLI3	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr1_+_47603109_47603127	0.302261	GLI3	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chr3_-_47517302_47517451	0.300407	GLI3	ENST00000441517.2|SCAP|ENSG00000114650.14|SREBF chaperone 	ENST00000545718.1|SCAP|ENSG00000114650.14|SREBF chaperone
hg19_v2_chr16_+_68678739_68678833	0.300315	GLI3	ENST00000264012.4|CDH3|ENSG00000062038.9|cadherin 3, type 1, P-cadherin (placental)
hg19_v2_chr1_-_202129105_202129140	0.298707	GLI3	ENST00000367279.4|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr3_-_12200851_12200885	0.296462	GLI3	ENST00000287814.4|TIMP4|ENSG00000157150.4|TIMP metallopeptidase inhibitor 4
hg19_v2_chr7_-_112430647_112430776	0.295904	GLI3	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr17_-_62502399_62502411	0.295471	GLI3	ENST00000450599.2|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000585060.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr19_+_17337027_17337062	0.294216	GLI3	ENST00000601529.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1 	ENST00000600232.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr12_+_69202795_69202810	0.292927	GLI3	ENST00000539479.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393415.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000523991.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000543323.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393416.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr11_+_73003824_73003859	0.290528	GLI3	ENST00000538328.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr3_+_11314099_11314122	0.283446	GLI3	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr5_-_157002749_157002768	0.280073	GLI3	ENST00000517905.1|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19 	ENST00000430702.2|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19 	ENST00000394020.1|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr17_-_42031300_42031313	0.279073	GLI3	ENST00000592796.1|PYY|ENSG00000131096.6|peptide YY
hg19_v2_chr5_+_169931009_169931065	0.278534	GLI3	ENST00000328939.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1 	ENST00000390656.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr3_+_195384929_195384964	0.278122	GLI3	ENST00000457233.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000539252.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000452844.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000429897.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000539717.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000453324.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000445430.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000414625.2|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000425425.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969
hg19_v2_chr1_-_31902614_31902614	0.277095	GLI3	ENST00000596131.1|AC114494.1|ENSG00000268950.1|HCG1787699; Uncharacterized protein
hg19_v2_chr1_-_153433120_153433177	0.273653	GLI3	ENST00000368723.3|S100A7|ENSG00000143556.4|S100 calcium binding protein A7
hg19_v2_chr1_+_44399466_44399518	0.270406	GLI3	ENST00000498139.2|ARTN|ENSG00000117407.12|artemin 	ENST00000491846.1|ARTN|ENSG00000117407.12|artemin
hg19_v2_chr17_+_58677539_58677610	0.268629	GLI3	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr17_+_28884130_28884130	0.265879	GLI3	ENST00000580161.1|TBC1D29|ENSG00000266733.1|TBC1 domain family, member 29
hg19_v2_chr19_-_46105411_46105481	0.265165	GLI3	ENST00000323040.4|GPR4|ENSG00000177464.4|G protein-coupled receptor 4 	ENST00000544371.1|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr2_-_220436248_220436282	0.263759	GLI3	ENST00000265318.4|OBSL1|ENSG00000124006.10|obscurin-like 1
hg19_v2_chr20_-_13619550_13619587	0.262919	GLI3	ENST00000455532.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000544472.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000539805.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000337743.4|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1
hg19_v2_chr10_-_79398127_79398156	0.262689	GLI3	ENST00000372443.1|KCNMA1|ENSG00000156113.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v2_chr10_+_51565188_51565236	0.260146	GLI3	ENST00000430396.2|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4 	ENST00000374087.4|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4 	ENST00000414907.2|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr19_-_55549624_55549639	0.257216	GLI3	ENST00000417454.1|GP6|ENSG00000088053.7|glycoprotein VI (platelet) 	ENST00000310373.3|GP6|ENSG00000088053.7|glycoprotein VI (platelet) 	ENST00000333884.2|GP6|ENSG00000088053.7|glycoprotein VI (platelet)
hg19_v2_chr6_+_42883727_42883740	0.256695	GLI3	ENST00000304672.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha 	ENST00000441198.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha 	ENST00000446507.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha
hg19_v2_chr17_+_17380294_17380351	0.254059	GLI3	ENST00000268711.3|MED9|ENSG00000141026.4|mediator complex subunit 9 	ENST00000580462.1|MED9|ENSG00000141026.4|mediator complex subunit 9
hg19_v2_chr5_-_101632153_101632253	0.252317	GLI3	ENST00000310954.6|SLCO4C1|ENSG00000173930.8|solute carrier organic anion transporter family, member 4C1
hg19_v2_chr9_-_139334247_139334302	0.246955	GLI3	ENST00000371712.3|INPP5E|ENSG00000148384.11|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v2_chr11_+_118478313_118478358	0.236995	GLI3	ENST00000356063.5|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr18_+_77623668_77623668	0.236091	GLI3	ENST00000316249.3|KCNG2|ENSG00000178342.4|potassium voltage-gated channel, subfamily G, member 2
hg19_v2_chr6_-_33281979_33281992	0.229631	GLI3	ENST00000426633.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000467025.1|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr11_-_116694009_116694029	0.218491	GLI3	ENST00000357780.3|APOA4|ENSG00000110244.5|apolipoprotein A-IV
hg19_v2_chr13_+_32889605_32889653	0.212844	GLI3	ENST00000380152.3|BRCA2|ENSG00000139618.10|breast cancer 2, early onset 	ENST00000544455.1|BRCA2|ENSG00000139618.10|breast cancer 2, early onset 	ENST00000530893.2|BRCA2|ENSG00000139618.10|breast cancer 2, early onset
hg19_v2_chr19_-_53606604_53606692	0.208004	GLI3	ENST00000599056.1|ZNF160|ENSG00000170949.13|zinc finger protein 160 	ENST00000599247.1|ZNF160|ENSG00000170949.13|zinc finger protein 160 	ENST00000355147.5|ZNF160|ENSG00000170949.13|zinc finger protein 160 	ENST00000429604.1|ZNF160|ENSG00000170949.13|zinc finger protein 160 	ENST00000418871.1|ZNF160|ENSG00000170949.13|zinc finger protein 160 	ENST00000599637.1|ZNF160|ENSG00000170949.13|zinc finger protein 160
hg19_v2_chr16_+_57653989_57654022	0.198924	GLI3	ENST00000567835.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000569372.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000563548.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562003.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr18_+_13611763_13611815	0.198579	GLI3	ENST00000585931.1|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr1_+_47901689_47901689	0.195936	GLI3	ENST00000334793.5|FOXD2|ENSG00000186564.5|forkhead box D2
hg19_v2_chr6_+_41010293_41010457	0.194587	GLI3	ENST00000373161.1|TSPO2|ENSG00000112212.7|translocator protein 2 	ENST00000373158.2|TSPO2|ENSG00000112212.7|translocator protein 2 	ENST00000470917.1|TSPO2|ENSG00000112212.7|translocator protein 2
hg19_v2_chr6_-_109777128_109777203	0.189774	GLI3	ENST00000358807.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENST00000358577.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg19_v2_chr1_-_151798546_151798590	0.187042	GLI3	ENST00000356728.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr18_-_12884150_12884250	0.18522	GLI3	ENST00000591115.1|PTPN2|ENSG00000175354.14|protein tyrosine phosphatase, non-receptor type 2 	ENST00000309660.5|PTPN2|ENSG00000175354.14|protein tyrosine phosphatase, non-receptor type 2
hg19_v2_chr11_-_72432950_72433073	0.185209	GLI3	ENST00000426523.1|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 	ENST00000429686.1|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr19_-_14064114_14064204	0.182878	GLI3	ENST00000585607.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538517.2|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000587458.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538371.2|PODNL1|ENSG00000132000.7|podocan-like 1
hg19_v2_chr4_-_96470350_96470373	0.182115	GLI3	ENST00000504962.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans) 	ENST00000453304.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans) 	ENST00000506749.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans)
hg19_v2_chr10_+_115312766_115312786	0.181946	GLI3	ENST00000351270.3|HABP2|ENSG00000148702.10|hyaluronan binding protein 2
hg19_v2_chr8_-_22526597_22526661	0.179514	GLI3	ENST00000519513.1|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000276416.6|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000520292.1|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000522268.1|BIN3|ENSG00000147439.7|bridging integrator 3
hg19_v2_chr17_-_40540377_40540481	0.172033	GLI3	ENST00000404395.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000389272.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000585517.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000588065.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr11_-_61658853_61658932	0.171468	GLI3	ENST00000525588.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3 	ENST00000540820.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3
hg19_v2_chr12_+_48166978_48167047	0.170679	GLI3	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chrX_+_48542168_48542241	0.168142	GLI3	ENST00000376701.4|WAS|ENSG00000015285.6|Wiskott-Aldrich syndrome
hg19_v2_chr2_-_171627269_171627285	0.16003	GLI3	ENST00000442456.1|AC007405.4|ENSG00000234350.1|AC007405.4
hg19_v2_chr9_+_137533615_137533660	0.157717	GLI3	ENST00000371817.3|COL5A1|ENSG00000130635.11|collagen, type V, alpha 1
hg19_v2_chr22_-_30867973_30868036	0.153795	GLI3	ENST00000402286.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000401751.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000539629.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000403066.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000215812.4|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr1_+_40505891_40505995	0.152255	GLI3	ENST00000372797.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372802.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000449311.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast)
hg19_v2_chr19_-_54619006_54619055	0.149661	GLI3	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr22_+_31892261_31892278	0.145711	GLI3	ENST00000432498.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000540643.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000443326.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000414585.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast)
hg19_v2_chr8_+_23104130_23104184	0.144007	GLI3	ENST00000313219.7|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7 	ENST00000519984.1|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7
hg19_v2_chr5_+_179247759_179247921	0.14172	GLI3	ENST00000389805.4|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000504627.1|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000402874.3|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000510187.1|SQSTM1|ENSG00000161011.15|sequestosome 1
hg19_v2_chr8_-_42623924_42623935	0.140579	GLI3	ENST00000276410.2|CHRNA6|ENSG00000147434.4|cholinergic receptor, nicotinic, alpha 6 (neuronal)
hg19_v2_chr19_-_44100275_44100302	0.137539	GLI3	ENST00000422989.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q 	ENST00000598324.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q
hg19_v2_chr5_+_149340282_149340336	0.132451	GLI3	ENST00000286298.4|SLC26A2|ENSG00000155850.7|solute carrier family 26 (anion exchanger), member 2
hg19_v2_chr8_-_17533838_17533865	0.131433	GLI3	ENST00000400046.1|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr5_+_169931249_169931364	0.131294	GLI3	ENST00000520740.1|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr10_-_28571015_28571067	0.13009	GLI3	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chrX_+_1734051_1734068	0.129378	GLI3	ENST00000381229.4|ASMT|ENSG00000196433.7|acetylserotonin O-methyltransferase 	ENST00000381233.3|ASMT|ENSG00000196433.7|acetylserotonin O-methyltransferase
hg19_v2_chr10_+_51565108_51565167	0.128817	GLI3	ENST00000438493.1|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4 	ENST00000452682.1|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr1_+_202091980_202091991	0.126554	GLI3	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr19_-_54618650_54618688	0.126398	GLI3	ENST00000391757.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr11_-_35441597_35441613	0.126081	GLI3	ENST00000395753.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr17_-_54991395_54991453	0.125506	GLI3	ENST00000316881.4|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr10_+_134000404_134000432	0.123987	GLI3	ENST00000338492.4|DPYSL4|ENSG00000151640.8|dihydropyrimidinase-like 4 	ENST00000368629.1|DPYSL4|ENSG00000151640.8|dihydropyrimidinase-like 4
hg19_v2_chr19_-_51340469_51340469	0.123775	GLI3	ENST00000326856.4|KLK15|ENSG00000174562.9|kallikrein-related peptidase 15
hg19_v2_chr17_+_5031687_5031687	0.118367	GLI3	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr17_-_76921459_76921478	0.112361	GLI3	ENST00000262768.7|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr19_+_18284477_18284667	0.110476	GLI3	ENST00000407280.3|IFI30|ENSG00000216490.3|interferon, gamma-inducible protein 30
hg19_v2_chr17_-_7145106_7145172	0.110087	GLI3	ENST00000577035.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein
hg19_v2_chr17_+_40714092_40714205	0.104003	GLI3	ENST00000420359.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000449624.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000585811.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000585909.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000586771.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000421097.2|COASY|ENSG00000068120.10|CoA synthase 	ENST00000591779.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000587858.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000587214.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000587157.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000590958.1|COASY|ENSG00000068120.10|CoA synthase 	ENST00000393818.2|COASY|ENSG00000068120.10|CoA synthase
hg19_v2_chr8_-_17555164_17555204	0.102835	GLI3	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr13_+_113760098_113760121	0.099482	GLI3	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr17_-_3496171_3496171	0.0964512	GLI3	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr1_+_35220613_35220718	0.0957038	GLI3	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr9_-_26947453_26947473	0.0908991	GLI3	ENST00000397292.3|PLAA|ENSG00000137055.10|phospholipase A2-activating protein
hg19_v2_chr7_-_151217001_151217019	0.0908402	GLI3	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr5_-_132113036_132113061	0.0884015	GLI3	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr12_+_54943134_54943182	0.0881199	GLI3	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr22_+_31892373_31892556	0.0861139	GLI3	ENST00000443011.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000400289.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000444859.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000400288.2|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast)
hg19_v2_chr19_+_3708376_3708501	0.0848002	GLI3	ENST00000539908.2|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr8_-_57906362_57906452	0.0759524	GLI3	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr11_-_35441524_35441578	0.0759176	GLI3	ENST00000395750.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENST00000449068.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr7_+_130126012_130126069	0.0758023	GLI3	ENST00000341441.5|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr16_+_86612112_86612123	0.0722461	GLI3	ENST00000320241.3|FOXL1|ENSG00000176678.4|forkhead box L1
hg19_v2_chr11_-_73471655_73471767	0.0674093	GLI3	ENST00000400470.2|RAB6A|ENSG00000175582.15|RAB6A, member RAS oncogene family
hg19_v2_chrX_-_9001351_9001351	0.0646614	GLI3	ENST00000362066.3|FAM9B|ENSG00000177138.11|family with sequence similarity 9, member B
hg19_v2_chr10_+_11059826_11059932	0.0615872	GLI3	ENST00000450189.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr3_+_38035610_38035687	0.0575848	GLI3	ENST00000465644.1|VILL|ENSG00000136059.10|villin-like
hg19_v2_chr17_-_42200996_42201070	0.0571215	GLI3	ENST00000587135.1|HDAC5|ENSG00000108840.11|histone deacetylase 5 	ENST00000225983.6|HDAC5|ENSG00000108840.11|histone deacetylase 5 	ENST00000393622.2|HDAC5|ENSG00000108840.11|histone deacetylase 5 	ENST00000588703.1|HDAC5|ENSG00000108840.11|histone deacetylase 5
hg19_v2_chr6_-_26032288_26032337	0.0533453	GLI3	ENST00000244661.2|HIST1H3B|ENSG00000124693.2|histone cluster 1, H3b
hg19_v2_chr16_-_88717482_88717560	0.0501477	GLI3	ENST00000261623.3|CYBA|ENSG00000051523.6|cytochrome b-245, alpha polypeptide
hg19_v2_chr19_+_44100727_44100804	0.0488538	GLI3	ENST00000528387.1|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000529930.1|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000336564.4|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000607544.1|SRRM5|ENSG00000226763.3|serine/arginine repetitive matrix 5 	ENST00000526798.1|SRRM5|ENSG00000226763.3|serine/arginine repetitive matrix 5
hg19_v2_chr15_-_27184664_27184686	0.0470417	GLI3	ENST00000541819.2|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr11_-_119187826_119187847	0.0461047	GLI3	ENST00000264036.4|MCAM|ENSG00000076706.10|melanoma cell adhesion molecule
hg19_v2_chrX_+_70364667_70364721	0.0438753	GLI3	ENST00000536169.1|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000395855.2|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000374051.3|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000358741.3|NLGN3|ENSG00000196338.8|neuroligin 3
hg19_v2_chr1_+_59762642_59762675	0.0435199	GLI3	ENST00000371218.4|FGGY|ENSG00000172456.12|FGGY carbohydrate kinase domain containing 	ENST00000303721.7|FGGY|ENSG00000172456.12|FGGY carbohydrate kinase domain containing
hg19_v2_chr19_-_42573650_42573726	0.0425127	GLI3	ENST00000593562.1|GRIK5|ENSG00000105737.5|glutamate receptor, ionotropic, kainate 5
hg19_v2_chr6_+_3849584_3849631	0.0424665	GLI3	ENST00000380274.1|FAM50B|ENSG00000145945.5|family with sequence similarity 50, member B 	ENST00000380272.3|FAM50B|ENSG00000145945.5|family with sequence similarity 50, member B
hg19_v2_chr19_+_36602104_36602105	0.0345103	GLI3	ENST00000585332.1|OVOL3|ENSG00000105261.5|ovo-like zinc finger 3 	ENST00000262637.4|OVOL3|ENSG00000105261.5|ovo-like zinc finger 3
hg19_v2_chr5_+_68788594_68788656	0.0344683	GLI3	ENST00000396442.2|OCLN|ENSG00000197822.6|occludin 	ENST00000380766.2|OCLN|ENSG00000197822.6|occludin
hg19_v2_chr12_-_49259643_49259681	0.0316828	GLI3	ENST00000309739.5|RND1|ENSG00000172602.5|Rho family GTPase 1
hg19_v2_chr17_-_58096336_58096413	0.0305983	GLI3	ENST00000587125.1|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene 	ENST00000407042.3|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
hg19_v2_chr9_+_21440440_21440440	0.03021	GLI3	ENST00000276927.1|IFNA1|ENSG00000197919.3|interferon, alpha 1
hg19_v2_chr19_-_14992264_14992264	0.0270433	GLI3	ENST00000327462.2|OR7A17|ENSG00000185385.2|olfactory receptor, family 7, subfamily A, member 17
hg19_v2_chr1_-_115053781_115053853	0.0261799	GLI3	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chr6_-_168479839_168479904	0.0261667	GLI3	ENST00000283309.6|FRMD1|ENSG00000153303.12|FERM domain containing 1
hg19_v2_chr14_+_22409308_22409322	0.0260733	GLI3	ENST00000390441.2|TRAV9-2|ENSG00000211793.2|T cell receptor alpha variable 9-2
hg19_v2_chr9_+_135937365_135937365	0.0259975	GLI3	ENST00000372080.4|CEL|ENSG00000170835.10|carboxyl ester lipase 	ENST00000351304.7|CEL|ENSG00000170835.10|carboxyl ester lipase
hg19_v2_chr15_+_83098710_83098710	0.0224909	GLI3	ENST00000561062.1|GOLGA6L9|ENSG00000196648.6|golgin A6 family-like 20 	ENST00000358583.3|GOLGA6L9|ENSG00000196648.6|golgin A6 family-like 20
hg19_v2_chr12_-_7261772_7261874	0.0206408	GLI3	ENST00000545280.1|C1RL|ENSG00000139178.6|complement component 1, r subcomponent-like 	ENST00000543933.1|C1RL|ENSG00000139178.6|complement component 1, r subcomponent-like 	ENST00000545337.1|C1RL|ENSG00000139178.6|complement component 1, r subcomponent-like 	ENST00000544702.1|C1RL|ENSG00000139178.6|complement component 1, r subcomponent-like 	ENST00000266542.4|C1RL|ENSG00000139178.6|complement component 1, r subcomponent-like
hg19_v2_chr8_-_42065187_42065242	0.014027	GLI3	ENST00000270189.6|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000352041.3|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000220809.4|PLAT|ENSG00000104368.13|plasminogen activator, tissue
hg19_v2_chr2_+_102928009_102928033	0.00910501	GLI3	ENST00000404917.2|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1 	ENST00000447231.1|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1
hg19_v2_chr16_+_68279207_68279252	0.00747769	GLI3	ENST00000413021.2|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000565744.1|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000219345.5|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV
hg19_v2_chr14_+_78870030_78870098	0.00574857	GLI3	ENST00000553631.1|NRXN3|ENSG00000021645.13|neurexin 3 	ENST00000554719.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr6_-_110736742_110736782	0.00569023	GLI3	ENST00000368924.3|DDO|ENSG00000203797.5|D-aspartate oxidase 	ENST00000368923.3|DDO|ENSG00000203797.5|D-aspartate oxidase
hg19_v2_chr1_+_25664408_25664408	0.00512037	GLI3	ENST00000374358.4|TMEM50A|ENSG00000183726.6|transmembrane protein 50A
hg19_v2_chr17_-_80231557_80231607	0.00474394	GLI3	ENST00000392334.2|CSNK1D|ENSG00000141551.10|casein kinase 1, delta 	ENST00000314028.6|CSNK1D|ENSG00000141551.10|casein kinase 1, delta
hg19_v2_chr11_+_32851487_32851496	0.00439211	GLI3	ENST00000257836.3|PRRG4|ENSG00000135378.3|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg19_v2_chr11_-_8986279_8986320	0.00355478	GLI3	ENST00000534025.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
