hg19_v2_chr2_+_196313239_196313256	32.3102	MSX1	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr13_-_88323218_88323434	26.6793	MSX1	ENST00000436290.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000453832.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000606590.1|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding)
hg19_v2_chr5_+_150404904_150404928	17.5076	MSX1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chrX_+_1710484_1710537	14.7785	MSX1	ENST00000313871.3|AKAP17A|ENSG00000197976.6|A kinase (PRKA) anchor protein 17A 	ENST00000381261.3|AKAP17A|ENSG00000197976.6|A kinase (PRKA) anchor protein 17A
hg19_v2_chr6_-_32095968_32096032	14.5039	MSX1	ENST00000375203.3|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta 	ENST00000375201.4|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta
hg19_v2_chr2_-_136288113_136288301	13.4806	MSX1	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chrX_+_73164149_73164166	11.9369	MSX1	ENST00000602938.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602294.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602920.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602737.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602772.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding)
hg19_v2_chr6_-_32557610_32557630	11.8849	MSX1	ENST00000360004.5|HLA-DRB1|ENSG00000196126.6|major histocompatibility complex, class II, DR beta 1
hg19_v2_chr18_-_5396271_5396333	10.6762	MSX1	ENST00000579951.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr6_-_84419101_84419127	10.6026	MSX1	ENST00000520302.1|SNAP91|ENSG00000065609.10|synaptosomal-associated protein, 91kDa 	ENST00000520213.1|SNAP91|ENSG00000065609.10|synaptosomal-associated protein, 91kDa 	ENST00000439399.2|SNAP91|ENSG00000065609.10|synaptosomal-associated protein, 91kDa 	ENST00000428679.2|SNAP91|ENSG00000065609.10|synaptosomal-associated protein, 91kDa 	ENST00000437520.1|SNAP91|ENSG00000065609.10|synaptosomal-associated protein, 91kDa
hg19_v2_chr13_-_38172863_38172981	10.5623	MSX1	ENST00000541481.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379743.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379742.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379749.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000541179.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379747.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor
hg19_v2_chr22_+_51176624_51176663	10.5418	MSX1	ENST00000216139.5|ACR|ENSG00000100312.6|acrosin 	ENST00000529621.1|ACR|ENSG00000100312.6|acrosin
hg19_v2_chr19_-_53757941_53758088	10.4394	MSX1	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr1_-_160492994_160493057	10.4157	MSX1	ENST00000368055.1|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368057.3|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368059.3|SLAMF6|ENSG00000162739.9|SLAM family member 6
hg19_v2_chr3_-_123339418_123339473	10.2541	MSX1	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr5_-_11588907_11588967	10.1804	MSX1	ENST00000513598.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000503622.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr11_-_85376121_85376181	10.0397	MSX1	ENST00000527447.1|CREBZF|ENSG00000137504.9|CREB/ATF bZIP transcription factor
hg19_v2_chr3_-_123339343_123339401	9.84258	MSX1	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr11_+_92085262_92085262	9.82656	MSX1	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr4_-_57547454_57547469	9.62959	MSX1	ENST00000556376.2|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr6_-_52705641_52705641	9.33652	MSX1	ENST00000370989.2|GSTA5|ENSG00000182793.6|glutathione S-transferase alpha 5
hg19_v2_chr19_-_53758094_53758147	9.1075	MSX1	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr5_+_121647386_121647464	8.57665	MSX1	ENST00000542191.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000506272.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000508681.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000509154.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr13_-_52733980_52734002	8.42708	MSX1	ENST00000339406.3|NEK3|ENSG00000136098.12|NIMA-related kinase 3
hg19_v2_chr6_-_32908765_32908786	8.11838	MSX1	ENST00000416244.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr3_-_21792838_21792927	7.86405	MSX1	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr7_-_36634181_36634262	7.75618	MSX1	ENST00000538464.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr11_-_128894053_128894123	7.55823	MSX1	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr5_+_67586465_67586534	7.50815	MSX1	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr14_+_22964877_22964914	7.39964	MSX1	ENST00000390494.1|TRAJ43|ENSG00000211846.1|T cell receptor alpha joining 43
hg19_v2_chr16_-_66584059_66584315	7.27172	MSX1	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr10_-_101380121_101380235	7.13509	MSX1	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr14_-_75389975_75390099	6.93294	MSX1	ENST00000555647.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1 	ENST00000557413.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr1_+_158985457_158985468	6.9274	MSX1	ENST00000567661.1|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16 	ENST00000474473.1|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr12_+_9980069_9980087	6.83449	MSX1	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr3_-_123512688_123512717	6.79311	MSX1	ENST00000475616.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr13_+_49551020_49551097	6.30134	MSX1	ENST00000541916.1|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr5_-_75919253_75919269	6.0035	MSX1	ENST00000296641.4|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr15_-_77712477_77712499	5.98721	MSX1	ENST00000560626.2|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1
hg19_v2_chr5_-_177207634_177207677	5.90103	MSX1	ENST00000513554.1|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A 	ENST00000440605.3|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A
hg19_v2_chr6_+_6588316_6588341	5.89406	MSX1	ENST00000379953.2|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr6_+_134758827_134758863	5.87829	MSX1	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr6_+_131894284_131894378	5.83202	MSX1	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr2_-_88927092_88927099	5.65018	MSX1	ENST00000303236.3|EIF2AK3|ENSG00000172071.7|eukaryotic translation initiation factor 2-alpha kinase 3
hg19_v2_chr14_-_75389925_75389969	5.40657	MSX1	ENST00000556776.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr11_+_12132117_12132160	5.34089	MSX1	ENST00000256194.4|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2
hg19_v2_chr3_+_108308513_108308558	5.26886	MSX1	ENST00000361582.3|DZIP3|ENSG00000198919.8|DAZ interacting zinc finger protein 3
hg19_v2_chr22_-_32766972_32766996	5.16711	MSX1	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr2_-_158345462_158345480	5.12936	MSX1	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr11_+_101785727_101785767	4.98438	MSX1	ENST00000263468.8|KIAA1377|ENSG00000110318.9|KIAA1377
hg19_v2_chr3_-_93781750_93781831	4.94345	MSX1	ENST00000314636.2|DHFRL1|ENSG00000178700.3|dihydrofolate reductase-like 1
hg19_v2_chr5_+_175490540_175490540	4.94143	MSX1	ENST00000515817.1|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chr3_+_171561127_171561306	4.90034	MSX1	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr14_+_22293618_22293642	4.81543	MSX1	ENST00000390432.2|TRAV10|ENSG00000211784.2|T cell receptor alpha variable 10
hg19_v2_chr1_+_158815588_158815691	4.76922	MSX1	ENST00000438394.1|MNDA|ENSG00000163563.7|myeloid cell nuclear differentiation antigen
hg19_v2_chr6_+_26020672_26020718	4.57304	MSX1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr8_+_28748765_28748833	4.4518	MSX1	ENST00000355231.5|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr22_-_32767017_32767063	4.38841	MSX1	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr16_-_66583701_66583783	4.37584	MSX1	ENST00000527800.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000525974.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000563369.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr18_+_61637159_61637483	4.35678	MSX1	ENST00000397985.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000353706.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000542677.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000397988.3|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000448851.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8
hg19_v2_chr14_+_50291993_50291993	4.22451	MSX1	ENST00000595378.1|AL627171.2|ENSG00000269832.1|HCG1786899; PRO2610; Uncharacterized protein
hg19_v2_chr2_+_32502952_32503025	4.07768	MSX1	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr2_-_209028300_209028316	4.05348	MSX1	ENST00000304502.4|CRYGA|ENSG00000168582.4|crystallin, gamma A
hg19_v2_chr4_-_120243545_120243562	4.02103	MSX1	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr10_+_13142225_13142246	3.88839	MSX1	ENST00000378747.3|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr12_+_56324756_56324873	3.80401	MSX1	ENST00000331886.5|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000555090.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa
hg19_v2_chr5_-_75919217_75919250	3.77579	MSX1	ENST00000504899.1|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr14_+_55595762_55595782	3.4972	MSX1	ENST00000254301.9|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr1_+_111415757_111415779	3.36678	MSX1	ENST00000429072.2|CD53|ENSG00000143119.8|CD53 molecule 	ENST00000271324.5|CD53|ENSG00000143119.8|CD53 molecule
hg19_v2_chr19_-_7812397_7812426	3.34896	MSX1	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr10_-_29923893_29923907	3.32483	MSX1	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr11_-_66964638_66964638	3.24969	MSX1	ENST00000444002.2|AP001885.1|ENSG00000179038.7|AP001885.1
hg19_v2_chr3_-_190040223_190040264	3.21615	MSX1	ENST00000295522.3|CLDN1|ENSG00000163347.5|claudin 1
hg19_v2_chr4_+_5527117_5527117	3.21021	MSX1	ENST00000505296.1|C4orf6|ENSG00000082929.4|chromosome 4 open reading frame 6
hg19_v2_chr9_+_115913222_115913266	3.1655	MSX1	ENST00000259392.3|SLC31A2|ENSG00000136867.6|solute carrier family 31 (copper transporter), member 2
hg19_v2_chrX_+_11311533_11311533	3.11782	MSX1	ENST00000380714.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000380712.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000348912.4|AMELX|ENSG00000125363.10|amelogenin, X-linked
hg19_v2_chr12_+_122688090_122688284	3.08291	MSX1	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr5_-_137475071_137475122	3.08075	MSX1	ENST00000265191.2|NME5|ENSG00000112981.3|NME/NM23 family member 5
hg19_v2_chr14_-_101295407_101295537	3.06049	MSX1	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr15_-_42500351_42500523	2.99204	MSX1	ENST00000348544.4|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae) 	ENST00000318006.5|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae)
hg19_v2_chr2_-_109605663_109605828	2.96181	MSX1	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr3_+_93781728_93781760	2.93369	MSX1	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr10_+_17270214_17270258	2.89557	MSX1	ENST00000544301.1|VIM|ENSG00000026025.9|vimentin
hg19_v2_chr5_+_82767487_82767510	2.89464	MSX1	ENST00000343200.5|VCAN|ENSG00000038427.11|versican 	ENST00000342785.4|VCAN|ENSG00000038427.11|versican
hg19_v2_chr5_+_140762268_140762467	2.88625	MSX1	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr19_-_7812446_7812473	2.86511	MSX1	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr5_+_140220769_140220907	2.86492	MSX1	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr19_-_53662257_53662319	2.84976	MSX1	ENST00000599096.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000334197.7|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000597183.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601804.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601469.2|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000452676.2|ZNF347|ENSG00000197937.8|zinc finger protein 347
hg19_v2_chr7_+_2636522_2636546	2.81302	MSX1	ENST00000423196.1|IQCE|ENSG00000106012.13|IQ motif containing E
hg19_v2_chr21_+_43619796_43619811	2.79369	MSX1	ENST00000398457.2|ABCG1|ENSG00000160179.14|ATP-binding cassette, sub-family G (WHITE), member 1
hg19_v2_chr10_+_135050908_135050908	2.77798	MSX1	ENST00000325980.9|VENTX|ENSG00000151650.7|VENT homeobox
hg19_v2_chr7_-_32338917_32338946	2.75588	MSX1	ENST00000396193.1|PDE1C|ENSG00000154678.12|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v2_chr6_+_118869452_118869475	2.71073	MSX1	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr5_+_82767583_82767744	2.61827	MSX1	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr8_+_1993152_1993168	2.54389	MSX1	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr8_-_121824374_121824391	2.5318	MSX1	ENST00000517992.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr11_+_62037622_62037637	2.47026	MSX1	ENST00000227918.2|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2 	ENST00000525380.1|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2
hg19_v2_chr2_+_168675182_168675182	2.44977	MSX1	ENST00000305861.1|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr9_+_79074068_79074150	2.41941	MSX1	ENST00000444201.2|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2 	ENST00000376730.4|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v2_chr19_+_55043977_55044008	2.35601	MSX1	ENST00000335056.3|KIR3DX1|ENSG00000104970.6|killer cell immunoglobulin-like receptor, three domains, X1
hg19_v2_chr4_+_5526883_5526883	2.33659	MSX1	ENST00000195455.2|C4orf6|ENSG00000082929.4|chromosome 4 open reading frame 6
hg19_v2_chr1_+_160160283_160160292	2.30702	MSX1	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr18_+_29598335_29598428	2.2285	MSX1	ENST00000217740.3|RNF125|ENSG00000101695.4|ring finger protein 125, E3 ubiquitin protein ligase
hg19_v2_chr13_-_47471155_47471214	2.1762	MSX1	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr14_+_68086515_68086595	2.06062	MSX1	ENST00000261783.3|ARG2|ENSG00000081181.3|arginase 2
hg19_v2_chr1_-_167487808_167487847	2.04946	MSX1	ENST00000392122.3|CD247|ENSG00000198821.6|CD247 molecule
hg19_v2_chr1_-_167487758_167487792	1.99325	MSX1	ENST00000362089.5|CD247|ENSG00000198821.6|CD247 molecule
hg19_v2_chr12_+_56324933_56324982	1.9486	MSX1	ENST00000549629.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000555218.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa
hg19_v2_chr7_+_99425633_99425739	1.88014	MSX1	ENST00000354829.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000421837.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000417625.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000342499.4|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000444905.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000415413.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000312017.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000222382.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43
hg19_v2_chr8_-_72274095_72274116	1.84162	MSX1	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr4_-_100140331_100140409	1.8139	MSX1	ENST00000407820.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394897.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000508558.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394899.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V)
hg19_v2_chr12_+_106751436_106751539	1.7225	MSX1	ENST00000228347.4|POLR3B|ENSG00000013503.5|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v2_chr6_+_136172820_136172846	1.68831	MSX1	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chrY_-_2655644_2655740	1.68662	MSX1	ENST00000525526.2|SRY|ENSG00000184895.6|sex determining region Y 	ENST00000534739.2|SRY|ENSG00000184895.6|sex determining region Y 	ENST00000383070.1|SRY|ENSG00000184895.6|sex determining region Y
hg19_v2_chr9_+_90112117_90112164	1.57363	MSX1	ENST00000358077.5|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr8_+_1993173_1993199	1.53615	MSX1	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr1_+_160160346_160160401	1.51189	MSX1	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr19_-_20150014_20150085	1.37432	MSX1	ENST00000358523.5|ZNF682|ENSG00000197124.7|zinc finger protein 682 	ENST00000397162.1|ZNF682|ENSG00000197124.7|zinc finger protein 682 	ENST00000601100.1|ZNF682|ENSG00000197124.7|zinc finger protein 682
hg19_v2_chr6_-_32784687_32784839	1.3472	MSX1	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr10_+_32873190_32873190	1.29609	MSX1	ENST00000375025.4|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
hg19_v2_chr2_-_219031709_219031720	1.27954	MSX1	ENST00000295683.2|CXCR1|ENSG00000163464.7|chemokine (C-X-C motif) receptor 1
hg19_v2_chr8_-_17555164_17555204	1.25145	MSX1	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr2_-_77749474_77749518	1.23693	MSX1	ENST00000409093.1|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4 	ENST00000409088.3|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4
hg19_v2_chr10_+_13141585_13141603	1.19548	MSX1	ENST00000378764.2|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr9_+_133539981_133539981	1.16427	MSX1	ENST00000253008.2|PRDM12|ENSG00000130711.3|PR domain containing 12
hg19_v2_chr13_+_50570019_50570028	1.1413	MSX1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr11_-_102401469_102401488	1.06019	MSX1	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr7_-_20256965_20257034	1.03287	MSX1	ENST00000400331.5|MACC1|ENSG00000183742.8|metastasis associated in colon cancer 1 	ENST00000332878.4|MACC1|ENSG00000183742.8|metastasis associated in colon cancer 1
hg19_v2_chr6_+_29141311_29141311	1.0037	MSX1	ENST00000377167.2|OR2J2|ENSG00000204700.3|olfactory receptor, family 2, subfamily J, member 2
hg19_v2_chr5_+_82767284_82767310	0.96372	MSX1	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr14_+_55595960_55595978	0.924129	MSX1	ENST00000554715.1|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr6_+_28092338_28092412	0.909468	MSX1	ENST00000340487.4|ZSCAN16|ENSG00000196812.4|zinc finger and SCAN domain containing 16
hg19_v2_chr6_-_109777128_109777203	0.905232	MSX1	ENST00000358807.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENST00000358577.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg19_v2_chr2_-_31361543_31361592	0.844643	MSX1	ENST00000349752.5|GALNT14|ENSG00000158089.10|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v2_chr22_+_41697520_41697613	0.690715	MSX1	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr11_-_102496063_102496063	0.653231	MSX1	ENST00000260228.2|MMP20|ENSG00000137674.3|matrix metallopeptidase 20
hg19_v2_chr12_+_9980113_9980133	0.535242	MSX1	ENST00000537723.1|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr9_-_15510287_15510309	0.532654	MSX1	ENST00000397519.2|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr18_-_3874271_3874337	0.442663	MSX1	ENST00000400149.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400155.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400150.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr4_-_186696425_186696452	0.292796	MSX1	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr1_-_149908217_149908248	0.213699	MSX1	ENST00000369140.3|MTMR11|ENSG00000014914.15|myotubularin related protein 11
hg19_v2_chr8_-_25281747_25281779	0.145536	MSX1	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr20_+_56964169_56964182	0.105777	MSX1	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr8_+_24241969_24241999	0.0823934	MSX1	ENST00000522298.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
