hg19_v2_chr5_+_156693091_156693150	5.47376	NANOG	ENST00000318218.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000442283.2|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000522463.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000521420.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr9_+_71820057_71820078	5.22127	NANOG	ENST00000539225.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr6_+_32407619_32407695	5.15744	NANOG	ENST00000395388.2|HLA-DRA|ENSG00000204287.9|major histocompatibility complex, class II, DR alpha 	ENST00000374982.5|HLA-DRA|ENSG00000204287.9|major histocompatibility complex, class II, DR alpha
hg19_v2_chr9_+_71819927_71820053	5.14717	NANOG	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr5_+_156693159_156693213	5.12617	NANOG	ENST00000347377.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr3_+_23847394_23847423	4.85666	NANOG	ENST00000306627.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr4_+_166248775_166248901	4.65595	NANOG	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr3_+_23847432_23847512	4.63212	NANOG	ENST00000346855.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr15_-_78526855_78526916	4.29703	NANOG	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr8_-_27468842_27468878	4.22295	NANOG	ENST00000523500.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr10_+_129845823_129845863	3.4732	NANOG	ENST00000306042.5|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr19_-_39342962_39343002	3.40028	NANOG	ENST00000600873.1|HNRNPL|ENSG00000104824.12|heterogeneous nuclear ribonucleoprotein L
hg19_v2_chr19_+_42381173_42381198	3.37633	NANOG	ENST00000221972.3|CD79A|ENSG00000105369.5|CD79a molecule, immunoglobulin-associated alpha
hg19_v2_chr11_-_67205538_67205538	3.0942	NANOG	ENST00000326294.3|PTPRCAP|ENSG00000213402.2|protein tyrosine phosphatase, receptor type, C-associated protein
hg19_v2_chr8_-_27468945_27468948	3.07642	NANOG	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr3_-_98241358_98241489	3.03497	NANOG	ENST00000503004.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000506575.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000513452.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000515620.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr6_+_292459_292535	2.96985	NANOG	ENST00000419235.2|DUSP22|ENSG00000112679.10|dual specificity phosphatase 22 	ENST00000605035.1|DUSP22|ENSG00000112679.10|dual specificity phosphatase 22 	ENST00000605863.1|DUSP22|ENSG00000112679.10|dual specificity phosphatase 22
hg19_v2_chrX_-_118827333_118827365	2.88065	NANOG	ENST00000360156.7|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354228.4|SEPT6|ENSG00000125354.18|septin 6 	ENST00000489216.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354416.3|SEPT6|ENSG00000125354.18|septin 6 	ENST00000394610.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000343984.5|SEPT6|ENSG00000125354.18|septin 6
hg19_v2_chr8_-_27469196_27469294	2.76721	NANOG	ENST00000546343.1|CLU|ENSG00000120885.15|clusterin 	ENST00000560566.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr6_+_292051_292124	2.76256	NANOG	ENST00000344450.5|DUSP22|ENSG00000112679.10|dual specificity phosphatase 22
hg19_v2_chr17_-_56606664_56606684	2.65817	NANOG	ENST00000580844.1|SEPT4|ENSG00000108387.10|septin 4
hg19_v2_chr19_-_42806919_42806958	2.63612	NANOG	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr15_+_78832747_78832820	2.54835	NANOG	ENST00000560217.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000044462.7|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559082.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559948.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000413382.2|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559146.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000558281.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4
hg19_v2_chrX_+_47092314_47092431	2.50039	NANOG	ENST00000218348.3|USP11|ENSG00000102226.5|ubiquitin specific peptidase 11
hg19_v2_chr19_-_42806444_42806500	2.48074	NANOG	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr15_+_78833105_78833192	2.46305	NANOG	ENST00000558341.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559437.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4
hg19_v2_chr19_-_42806723_42806795	2.44267	NANOG	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr10_+_64133934_64133954	2.42961	NANOG	ENST00000395254.3|ZNF365|ENSG00000138311.11|zinc finger protein 365 	ENST00000395255.3|ZNF365|ENSG00000138311.11|zinc finger protein 365 	ENST00000410046.3|ZNF365|ENSG00000138311.11|zinc finger protein 365
hg19_v2_chr14_+_23791159_23791231	2.35213	NANOG	ENST00000557702.1|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr4_-_16900184_16900195	2.2802	NANOG	ENST00000515064.1|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr2_-_175113088_175113249	2.26049	NANOG	ENST00000409546.1|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000428402.2|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr5_+_32585605_32585706	2.20516	NANOG	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr1_+_44870866_44870960	2.15845	NANOG	ENST00000355387.2|RNF220|ENSG00000187147.13|ring finger protein 220 	ENST00000361799.2|RNF220|ENSG00000187147.13|ring finger protein 220
hg19_v2_chr15_+_78833071_78833084	2.11693	NANOG	ENST00000559365.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4
hg19_v2_chr2_-_175113301_175113426	2.10853	NANOG	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr4_-_16900217_16900230	2.10677	NANOG	ENST00000441778.2|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr4_-_16900242_16900317	2.09317	NANOG	ENST00000502640.1|LDB2|ENSG00000169744.8|LIM domain binding 2 	ENST00000506732.1|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr17_-_34417479_34417496	2.05421	NANOG	ENST00000225245.5|CCL3|ENSG00000006075.11|chemokine (C-C motif) ligand 3
hg19_v2_chr11_-_57004658_57004739	2.01081	NANOG	ENST00000606794.1|APLNR|ENSG00000134817.9|apelin receptor
hg19_v2_chr4_+_79567362_79567380	1.92445	NANOG	ENST00000512322.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr4_+_79567314_79567348	1.87312	NANOG	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr4_-_16900410_16900432	1.85465	NANOG	ENST00000304523.5|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr8_+_42752053_42752154	1.63544	NANOG	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chr8_-_91095099_91095113	1.55942	NANOG	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr12_-_123187890_123187911	1.55478	NANOG	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr2_+_219081817_219081933	1.42996	NANOG	ENST00000315717.5|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000420104.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000295685.10|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr16_+_6069072_6069132	1.4275	NANOG	ENST00000547605.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000550418.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000553186.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr12_-_123201337_123201439	1.41197	NANOG	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr10_-_1034237_1034289	1.3842	NANOG	ENST00000381466.1|AL359878.1|ENSG00000205740.1|Uncharacterized protein
hg19_v2_chr7_+_102715315_102715380	1.37004	NANOG	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr7_+_6414128_6414185	1.36058	NANOG	ENST00000348035.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 	ENST00000356142.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg19_v2_chr19_-_42806842_42806880	1.33638	NANOG	ENST00000596265.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr4_-_5891918_5891960	1.26928	NANOG	ENST00000512574.1|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr12_-_51477333_51477426	1.24967	NANOG	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr10_-_27443155_27443288	1.24592	NANOG	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr2_+_171673072_171673225	1.22854	NANOG	ENST00000358196.3|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa) 	ENST00000375272.1|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa)
hg19_v2_chr6_+_31540056_31540074	1.1825	NANOG	ENST00000418386.2|LTA|ENSG00000226979.4|lymphotoxin alpha
hg19_v2_chr1_-_202129105_202129140	1.16645	NANOG	ENST00000367279.4|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr4_-_16077741_16077760	1.15451	NANOG	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr20_-_21494654_21494678	1.09862	NANOG	ENST00000377142.4|NKX2-2|ENSG00000125820.5|NK2 homeobox 2
hg19_v2_chr1_-_202129704_202129772	1.08613	NANOG	ENST00000476061.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000544762.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000467283.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000464870.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000435759.2|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000486116.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000543735.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000308986.5|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000477625.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr5_-_115872142_115872154	1.05072	NANOG	ENST00000510263.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr1_+_161632937_161632951	1.04761	NANOG	ENST00000236937.9|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000367961.4|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000358671.5|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32)
hg19_v2_chr3_-_15469006_15469043	1.01958	NANOG	ENST00000443029.1|METTL6|ENSG00000206562.7|methyltransferase like 6 	ENST00000383790.3|METTL6|ENSG00000206562.7|methyltransferase like 6 	ENST00000383789.5|METTL6|ENSG00000206562.7|methyltransferase like 6
hg19_v2_chr4_+_154074217_154074270	1.01116	NANOG	ENST00000437508.2|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr22_-_32026810_32026828	0.982878	NANOG	ENST00000266095.5|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase 	ENST00000397500.1|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase
hg19_v2_chr6_+_34204642_34204664	0.944542	NANOG	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr1_-_28520384_28520393	0.93674	NANOG	ENST00000305392.3|PTAFR|ENSG00000169403.7|platelet-activating factor receptor
hg19_v2_chrX_-_107019181_107019488	0.871277	NANOG	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr19_+_926000_926046	0.849774	NANOG	ENST00000263620.3|ARID3A|ENSG00000116017.6|AT rich interactive domain 3A (BRIGHT-like)
hg19_v2_chr1_+_159272111_159272136	0.837801	NANOG	ENST00000368114.1|FCER1A|ENSG00000179639.6|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg19_v2_chr6_+_31633011_31633047	0.799985	NANOG	ENST00000375885.4|CSNK2B|ENSG00000204435.9|casein kinase 2, beta polypeptide
hg19_v2_chr1_-_155959853_155959881	0.795825	NANOG	ENST00000462460.2|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2 	ENST00000368316.1|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr3_+_32147997_32148009	0.791429	NANOG	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr6_+_30525051_30525063	0.777724	NANOG	ENST00000376557.3|PRR3|ENSG00000204576.7|proline rich 3
hg19_v2_chr14_-_98444386_98444415	0.761692	NANOG	ENST00000556462.1|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64 	ENST00000556138.1|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64
hg19_v2_chr22_-_42084863_42084913	0.758207	NANOG	ENST00000401959.1|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 	ENST00000355257.3|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v2_chr15_+_73976715_73976843	0.750775	NANOG	ENST00000558689.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000560786.2|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561213.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000563584.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561416.1|CD276|ENSG00000103855.13|CD276 molecule
hg19_v2_chr2_+_170590321_170590408	0.715472	NANOG	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr15_-_78526942_78527049	0.706751	NANOG	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr19_+_50084561_50084603	0.681249	NANOG	ENST00000246794.5|PRRG2|ENSG00000126460.6|proline rich Gla (G-carboxyglutamic acid) 2
hg19_v2_chr6_+_30524663_30524799	0.632725	NANOG	ENST00000376560.3|PRR3|ENSG00000204576.7|proline rich 3
hg19_v2_chr3_+_132379154_132379256	0.623513	NANOG	ENST00000468022.1|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5 	ENST00000473651.1|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5 	ENST00000494238.2|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5
hg19_v2_chr6_+_151561085_151561146	0.614186	NANOG	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr17_+_75372165_75372357	0.612787	NANOG	ENST00000427674.2|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr3_-_52567792_52567815	0.610845	NANOG	ENST00000307092.4|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000422318.2|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000459839.1|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2
hg19_v2_chr10_+_69644404_69644427	0.610637	NANOG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr6_+_148663729_148663847	0.580902	NANOG	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr6_+_107077435_107077464	0.580688	NANOG	ENST00000369046.4|QRSL1|ENSG00000130348.7|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
hg19_v2_chr1_+_201924619_201924652	0.549859	NANOG	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr12_-_123215306_123215390	0.537391	NANOG	ENST00000356987.2|HCAR1|ENSG00000196917.4|hydroxycarboxylic acid receptor 1 	ENST00000436083.2|HCAR1|ENSG00000196917.4|hydroxycarboxylic acid receptor 1
hg19_v2_chr11_-_46142948_46143043	0.520244	NANOG	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr12_-_101604185_101604185	0.508086	NANOG	ENST00000536262.2|SLC5A8|ENSG00000256870.2|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
hg19_v2_chr10_+_123922941_123923023	0.459981	NANOG	ENST00000360561.3|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr17_+_43224684_43224684	0.456734	NANOG	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr3_+_44916098_44916104	0.447704	NANOG	ENST00000296125.4|TGM4|ENSG00000163810.7|transglutaminase 4
hg19_v2_chr14_-_92198403_92198430	0.435057	NANOG	ENST00000553329.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta 	ENST00000256343.3|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta
hg19_v2_chr10_+_1034646_1034660	0.419435	NANOG	ENST00000360059.5|GTPBP4|ENSG00000107937.14|GTP binding protein 4 	ENST00000545048.1|GTPBP4|ENSG00000107937.14|GTP binding protein 4
hg19_v2_chr16_+_3508063_3508086	0.395291	NANOG	ENST00000576787.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572942.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000576916.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000575076.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572131.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr5_-_169816638_169816681	0.392934	NANOG	ENST00000521859.1|KCNMB1|ENSG00000145936.4|potassium large conductance calcium-activated channel, subfamily M, beta member 1 	ENST00000274629.4|KCNMB1|ENSG00000145936.4|potassium large conductance calcium-activated channel, subfamily M, beta member 1
hg19_v2_chr18_+_13218769_13218792	0.389615	NANOG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr19_-_50370799_50370843	0.388854	NANOG	ENST00000600910.1|PNKP|ENSG00000039650.5|polynucleotide kinase 3'-phosphatase 	ENST00000322344.3|PNKP|ENSG00000039650.5|polynucleotide kinase 3'-phosphatase 	ENST00000600573.1|PNKP|ENSG00000039650.5|polynucleotide kinase 3'-phosphatase
hg19_v2_chr22_+_26565440_26565624	0.375546	NANOG	ENST00000404234.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000529632.2|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000360929.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000248933.6|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000343706.4|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like
hg19_v2_chr16_+_30759563_30759620	0.375394	NANOG	ENST00000563588.1|PHKG2|ENSG00000156873.11|phosphorylase kinase, gamma 2 (testis) 	ENST00000565924.1|PHKG2|ENSG00000156873.11|phosphorylase kinase, gamma 2 (testis) 	ENST00000424889.3|PHKG2|ENSG00000156873.11|phosphorylase kinase, gamma 2 (testis)
hg19_v2_chr17_-_61777459_61777502	0.372957	NANOG	ENST00000578993.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000583211.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000259006.3|LIMD2|ENSG00000136490.4|LIM domain containing 2
hg19_v2_chr10_+_5566916_5566932	0.368888	NANOG	ENST00000315238.1|CALML3|ENSG00000178363.3|calmodulin-like 3
hg19_v2_chr16_+_30759700_30759771	0.367524	NANOG	ENST00000328273.7|PHKG2|ENSG00000156873.11|phosphorylase kinase, gamma 2 (testis)
hg19_v2_chr16_-_70719925_70719989	0.362252	NANOG	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr2_-_240322643_240322661	0.348708	NANOG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chrX_+_47082408_47082460	0.320978	NANOG	ENST00000518022.1|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16 	ENST00000276052.6|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16
hg19_v2_chr10_-_70092635_70092666	0.314921	NANOG	ENST00000309049.4|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chr8_-_102181718_102181857	0.310791	NANOG	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr10_+_123923205_123923359	0.308903	NANOG	ENST00000369004.3|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2 	ENST00000260733.3|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr10_+_123923105_123923160	0.305463	NANOG	ENST00000368999.1|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr1_+_203096831_203096864	0.303001	NANOG	ENST00000337894.4|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr11_-_72504637_72504680	0.291446	NANOG	ENST00000536377.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10 	ENST00000359373.5|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr11_+_63870660_63870660	0.231892	NANOG	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr19_-_54327542_54327648	0.22907	NANOG	ENST00000391775.3|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000324134.6|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000535162.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000351894.4|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000354278.3|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000391773.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000345770.5|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000391772.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12
hg19_v2_chr10_-_49813090_49813198	0.228231	NANOG	ENST00000249601.4|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr1_+_203097407_203097476	0.22627	NANOG	ENST00000367235.1|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr8_+_9413410_9413451	0.221174	NANOG	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr7_-_2883928_2883993	0.186316	NANOG	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr19_+_4969116_4969143	0.180776	NANOG	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr16_+_3507985_3508061	0.174377	NANOG	ENST00000421765.3|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000610180.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000608993.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000360862.5|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000414063.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr3_+_15468862_15468909	0.150074	NANOG	ENST00000396842.2|EAF1|ENSG00000144597.9|ELL associated factor 1
hg19_v2_chr19_-_36870087_36870110	0.143752	NANOG	ENST00000270001.7|ZFP14|ENSG00000142065.9|ZFP14 zinc finger protein
hg19_v2_chr6_+_88032299_88032350	0.143036	NANOG	ENST00000608353.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000392863.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000229570.5|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608525.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608868.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8
hg19_v2_chr20_-_61557821_61557881	0.134812	NANOG	ENST00000354665.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000370368.1|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395343.1|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395340.1|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr12_-_57410304_57410325	0.107432	NANOG	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr19_-_13213662_13213686	0.106353	NANOG	ENST00000264824.4|LYL1|ENSG00000104903.4|lymphoblastic leukemia derived sequence 1
hg19_v2_chr1_+_145576007_145576026	0.0896475	NANOG	ENST00000369298.1|PIAS3|ENSG00000131788.11|protein inhibitor of activated STAT, 3
hg19_v2_chr19_+_8455077_8455083	0.0851989	NANOG	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr20_+_43343886_43344020	0.0727147	NANOG	ENST00000190983.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr1_+_161551101_161551226	0.0690625	NANOG	ENST00000367962.4|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000367960.5|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000403078.3|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000428605.2|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32)
hg19_v2_chr3_+_121774202_121774222	0.063224	NANOG	ENST00000469710.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000493101.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000330540.2|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000264468.5|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr16_+_640055_640118	0.0602263	NANOG	ENST00000568586.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000538492.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000248139.3|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chr20_+_43343517_43343580	0.0590981	NANOG	ENST00000372865.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr6_-_131277510_131277625	0.0538806	NANOG	ENST00000525193.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2 	ENST00000527659.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr2_-_69664586_69664760	0.0392185	NANOG	ENST00000303698.3|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000394305.1|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000410022.2|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
hg19_v2_chr17_+_7387677_7387691	0.0329954	NANOG	ENST00000322644.6|POLR2A|ENSG00000181222.10|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
hg19_v2_chr1_+_145575980_145576001	0.0304417	NANOG	ENST00000393045.2|PIAS3|ENSG00000131788.11|protein inhibitor of activated STAT, 3
hg19_v2_chr21_-_34960930_34960944	0.0111419	NANOG	ENST00000437395.1|DONSON|ENSG00000159147.13|downstream neighbor of SON
hg19_v2_chr20_+_43343476_43343487	0.00496776	NANOG	ENST00000372868.2|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
