hg19_v2_chrX_-_151938171_151938240	11.0797	PAX8	ENST00000393902.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000417212.1|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000370278.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3
hg19_v2_chr1_-_27952741_27952753	10.0505	PAX8	ENST00000399173.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr14_-_106054659_106054732	7.63382	PAX8	ENST00000390539.2|IGHA2|ENSG00000211890.3|immunoglobulin heavy constant alpha 2 (A2m marker)
hg19_v2_chrX_+_151867214_151867284	7.33222	PAX8	ENST00000329342.5|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000412733.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000457643.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6
hg19_v2_chr6_-_27858570_27858611	7.29819	PAX8	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr2_+_90248739_90248739	6.52284	PAX8	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr11_-_58343319_58343338	6.12225	PAX8	ENST00000395074.2|LPXN|ENSG00000110031.8|leupaxin
hg19_v2_chr2_+_90198535_90198535	5.30839	PAX8	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chr2_-_211179883_211179914	5.19317	PAX8	ENST00000352451.3|MYL1|ENSG00000168530.11|myosin, light chain 1, alkali; skeletal, fast
hg19_v2_chr22_+_22707260_22707289	5.10886	PAX8	ENST00000390293.1|IGLV5-48|ENSG00000211647.1|immunoglobulin lambda variable 5-48 (non-functional)
hg19_v2_chr11_+_117857063_117857121	4.98534	PAX8	ENST00000227752.3|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000541785.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000545409.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha
hg19_v2_chr14_-_23288930_23289020	4.96105	PAX8	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chrX_+_151903207_151903234	4.94654	PAX8	ENST00000370287.3|CSAG1|ENSG00000198930.8|chondrosarcoma associated gene 1
hg19_v2_chr19_+_42301079_42301090	4.86196	PAX8	ENST00000596544.1|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr2_-_179672142_179672157	4.59568	PAX8	ENST00000342992.6|TTN|ENSG00000155657.19|titin 	ENST00000360870.5|TTN|ENSG00000155657.19|titin 	ENST00000460472.2|TTN|ENSG00000155657.19|titin 	ENST00000589042.1|TTN|ENSG00000155657.19|titin 	ENST00000591111.1|TTN|ENSG00000155657.19|titin 	ENST00000342175.6|TTN|ENSG00000155657.19|titin 	ENST00000359218.5|TTN|ENSG00000155657.19|titin
hg19_v2_chr1_-_25256368_25256476	4.49113	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr19_-_37701386_37701453	4.41775	PAX8	ENST00000527838.1|ZNF585B|ENSG00000245680.5|zinc finger protein 585B 	ENST00000591492.1|ZNF585B|ENSG00000245680.5|zinc finger protein 585B 	ENST00000532828.2|ZNF585B|ENSG00000245680.5|zinc finger protein 585B
hg19_v2_chr6_-_44233361_44233500	4.34069	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr6_+_160542870_160542968	4.03547	PAX8	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr14_-_107114267_107114277	4.02463	PAX8	ENST00000454421.2|IGHV3-64|ENSG00000223648.2|immunoglobulin heavy variable 3-64
hg19_v2_chr6_-_134639180_134639220	3.94678	PAX8	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chrX_-_151903184_151903211	3.83908	PAX8	ENST00000357916.4|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12 	ENST00000393869.3|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12
hg19_v2_chr1_-_161600990_161601003	3.66142	PAX8	ENST00000531221.1|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
hg19_v2_chr22_+_21133469_21133469	3.54637	PAX8	ENST00000406799.1|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr1_-_161600942_161600975	3.53237	PAX8	ENST00000421702.2|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
hg19_v2_chr2_+_90259593_90259593	3.51052	PAX8	ENST00000471857.1|IGKV1D-8|ENSG00000239819.1|immunoglobulin kappa variable 1D-8
hg19_v2_chr10_+_135340859_135341001	3.49678	PAX8	ENST00000252945.3|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000421586.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000418356.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1
hg19_v2_chr17_+_1665345_1665406	3.47976	PAX8	ENST00000576406.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 	ENST00000571149.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
hg19_v2_chr12_-_123201337_123201439	3.4547	PAX8	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr1_+_161494036_161494036	3.40724	PAX8	ENST00000309758.4|HSPA6|ENSG00000173110.6|heat shock 70kDa protein 6 (HSP70B')
hg19_v2_chr10_+_70847852_70847874	3.3553	PAX8	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr18_-_21017817_21017948	3.35163	PAX8	ENST00000542162.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000383233.3|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000582336.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000450466.2|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000578520.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000399707.1|TMEM241|ENSG00000134490.9|transmembrane protein 241
hg19_v2_chr19_-_51538118_51538134	3.32623	PAX8	ENST00000529888.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr2_-_79313973_79314059	3.29301	PAX8	ENST00000454188.1|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chr12_-_123187890_123187911	3.27821	PAX8	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr1_-_161600822_161600923	3.2466	PAX8	ENST00000534776.1|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b) 	ENST00000540048.1|FCGR3A|ENSG00000203747.5|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
hg19_v2_chr19_-_52133588_52133588	3.21315	PAX8	ENST00000570106.2|SIGLEC5|ENSG00000105501.7|sialic acid binding Ig-like lectin 5
hg19_v2_chr6_+_160542821_160542852	3.11343	PAX8	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr11_+_60223312_60223353	3.11332	PAX8	ENST00000532491.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000532073.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000534668.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000528313.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000533306.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chr6_+_14117872_14118012	3.08078	PAX8	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chr1_-_153013588_153013605	3.04165	PAX8	ENST00000360379.3|SPRR2D|ENSG00000163216.6|small proline-rich protein 2D
hg19_v2_chr11_+_60223225_60223297	2.99447	PAX8	ENST00000524807.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000345732.4|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chr11_-_47870091_47870121	2.97085	PAX8	ENST00000526870.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr2_+_79252834_79252861	2.9292	PAX8	ENST00000409471.1|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr22_+_21128167_21128167	2.92576	PAX8	ENST00000215727.5|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr17_+_7462103_7462110	2.89707	PAX8	ENST00000396545.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr13_+_31309645_31309726	2.89399	PAX8	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chrX_+_151883090_151883174	2.86525	PAX8	ENST00000370293.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000423993.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000447530.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000458057.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000331220.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000422085.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000453150.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000409560.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B
hg19_v2_chr19_-_51537982_51537997	2.85634	PAX8	ENST00000525263.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr17_+_7461849_7461914	2.81815	PAX8	ENST00000338784.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr2_+_90192768_90192768	2.81408	PAX8	ENST00000390275.2|IGKV1D-13|ENSG00000211630.2|immunoglobulin kappa variable 1D-13
hg19_v2_chr15_+_89631647_89631725	2.814	PAX8	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr19_+_52901094_52901134	2.80561	PAX8	ENST00000391788.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000436397.1|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000391787.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000360465.3|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000494167.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000493272.1|ZNF528|ENSG00000167555.9|zinc finger protein 528
hg19_v2_chr19_-_51538148_51538203	2.77527	PAX8	ENST00000319590.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12 	ENST00000250351.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr3_+_121796697_121796750	2.75903	PAX8	ENST00000482356.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000393627.2|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr9_-_116837249_116837318	2.73485	PAX8	ENST00000466610.2|AMBP|ENSG00000106927.7|alpha-1-microglobulin/bikunin precursor
hg19_v2_chr17_+_7461781_7461820	2.72337	PAX8	ENST00000349228.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr2_+_79252822_79252833	2.69719	PAX8	ENST00000272324.5|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr2_-_152590946_152590960	2.63259	PAX8	ENST00000172853.10|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr2_-_79386786_79386886	2.59566	PAX8	ENST00000393878.1|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000305165.2|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000409839.3|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha
hg19_v2_chr2_+_79252804_79252815	2.58358	PAX8	ENST00000393897.2|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr2_-_152590982_152591001	2.52468	PAX8	ENST00000409198.1|NEB|ENSG00000183091.15|nebulin 	ENST00000397345.3|NEB|ENSG00000183091.15|nebulin 	ENST00000427231.2|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr17_+_7462031_7462086	2.52369	PAX8	ENST00000380535.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr8_-_21771182_21771208	2.46195	PAX8	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr11_-_62457371_62457371	2.41023	PAX8	ENST00000317449.4|LRRN4CL|ENSG00000177363.4|LRRN4 C-terminal like
hg19_v2_chr1_-_119683251_119683298	2.3581	PAX8	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr13_-_95131923_95131944	2.34139	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr17_-_44657017_44657088	2.32723	PAX8	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr9_+_124048864_124048892	2.28016	PAX8	ENST00000545652.1|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr19_-_40228657_40228674	2.23607	PAX8	ENST00000221804.4|CLC|ENSG00000105205.6|Charcot-Leyden crystal galectin
hg19_v2_chr3_-_49158218_49158264	2.20019	PAX8	ENST00000417901.1|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000306026.5|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000434032.2|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19
hg19_v2_chr3_+_125694347_125694467	2.18847	PAX8	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr1_-_119682812_119682947	2.1302	PAX8	ENST00000537870.1|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr19_+_17337473_17337549	2.12873	PAX8	ENST00000598068.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr1_+_171227069_171227096	2.07271	PAX8	ENST00000354841.4|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr11_+_9482551_9482604	2.02389	PAX8	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr17_+_7461613_7461645	2.00844	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr6_-_32784687_32784839	1.9751	PAX8	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr1_+_13359819_13359819	1.94207	PAX8	ENST00000376168.1|PRAMEF5|ENSG00000204502.2|PRAME family member 5
hg19_v2_chr14_+_22458631_22458735	1.94103	PAX8	ENST00000390444.1|TRAV16|ENSG00000211796.1|T cell receptor alpha variable 16
hg19_v2_chr19_-_7766991_7767038	1.92986	PAX8	ENST00000597921.1|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23) 	ENST00000346664.5|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23)
hg19_v2_chr3_-_49158312_49158373	1.91641	PAX8	ENST00000398892.3|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000453664.1|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000398888.2|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19
hg19_v2_chr3_+_186435065_186435126	1.90377	PAX8	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr2_-_37193606_37193633	1.85705	PAX8	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr17_+_67410832_67410871	1.82869	PAX8	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chrX_-_71458802_71458897	1.80776	PAX8	ENST00000373657.1|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like 	ENST00000334463.3|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v2_chr4_+_69681710_69681716	1.79703	PAX8	ENST00000265403.7|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10 	ENST00000458688.2|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10
hg19_v2_chr17_-_44439084_44439130	1.79428	PAX8	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr11_+_9482512_9482534	1.77857	PAX8	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr13_+_51483814_51483935	1.76508	PAX8	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr12_+_133757995_133758114	1.75095	PAX8	ENST00000536435.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000228289.5|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000541211.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000500625.3|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000539248.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000542711.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000536899.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000542986.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000537565.1|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000541975.2|ZNF268|ENSG00000090612.16|zinc finger protein 268
hg19_v2_chr4_-_80329356_80329387	1.74804	PAX8	ENST00000358842.3|GK2|ENSG00000196475.4|glycerol kinase 2
hg19_v2_chr3_+_190105909_190105966	1.72561	PAX8	ENST00000456423.1|CLDN16|ENSG00000113946.3|claudin 16
hg19_v2_chr1_+_15943995_15944014	1.7216	PAX8	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr17_+_7461580_7461610	1.72049	PAX8	ENST00000483039.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000396542.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr15_+_89631381_89631391	1.70208	PAX8	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr16_-_20367584_20367628	1.70084	PAX8	ENST00000570689.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr6_+_135502408_135502459	1.69864	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr15_-_38519066_38519111	1.6851	PAX8	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chr12_-_9360966_9360996	1.64416	PAX8	ENST00000261336.2|PZP|ENSG00000126838.5|pregnancy-zone protein
hg19_v2_chr6_-_82462425_82462491	1.62502	PAX8	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr9_+_27109392_27109435	1.59045	PAX8	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr1_+_100818156_100818210	1.57002	PAX8	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr11_+_7626950_7626971	1.54582	PAX8	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr11_-_104905840_104905977	1.5201	PAX8	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr12_+_57828521_57828543	1.5169	PAX8	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr6_+_135502501_135502652	1.51307	PAX8	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr1_+_160709029_160709047	1.47556	PAX8	ENST00000444090.2|SLAMF7|ENSG00000026751.12|SLAM family member 7 	ENST00000441662.2|SLAMF7|ENSG00000026751.12|SLAM family member 7
hg19_v2_chr8_-_20040638_20040717	1.47324	PAX8	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr6_+_135502466_135502489	1.47221	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr4_+_118955500_118955612	1.46886	PAX8	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr4_-_70361579_70361600	1.45575	PAX8	ENST00000512583.1|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr12_-_110883346_110883392	1.44902	PAX8	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr17_-_33760269_33760302	1.41158	PAX8	ENST00000452764.3|SLFN12|ENSG00000172123.8|schlafen family member 12
hg19_v2_chr10_+_35484793_35484937	1.41073	PAX8	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr1_+_40915725_40915808	1.40535	PAX8	ENST00000484445.1|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000411995.2|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000361584.3|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B
hg19_v2_chr19_+_54704610_54704683	1.40255	PAX8	ENST00000302907.4|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr15_-_35088340_35088340	1.38941	PAX8	ENST00000290378.4|ACTC1|ENSG00000159251.6|actin, alpha, cardiac muscle 1
hg19_v2_chr4_-_70361615_70361631	1.37154	PAX8	ENST00000305107.6|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr7_+_95115210_95115217	1.37122	PAX8	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr16_+_2083265_2083303	1.35265	PAX8	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr10_+_96443378_96443430	1.342	PAX8	ENST00000285979.6|CYP2C18|ENSG00000108242.8|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v2_chr7_+_107384142_107384173	1.27118	PAX8	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr19_-_51487282_51487346	1.27115	PAX8	ENST00000595820.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000597707.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000336317.4|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7
hg19_v2_chr19_-_44860820_44860843	1.27014	PAX8	ENST00000354340.4|ZNF112|ENSG00000062370.12|zinc finger protein 112 	ENST00000337401.4|ZNF112|ENSG00000062370.12|zinc finger protein 112 	ENST00000587909.1|ZNF112|ENSG00000062370.12|zinc finger protein 112
hg19_v2_chr19_+_54704718_54704742	1.26355	PAX8	ENST00000391752.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000402367.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000391751.3|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr12_-_53074182_53074197	1.22959	PAX8	ENST00000252244.3|KRT1|ENSG00000167768.4|keratin 1
hg19_v2_chr16_+_33006369_33006369	1.21308	PAX8	ENST00000425181.3|IGHV3OR16-10|ENSG00000233732.5|immunoglobulin heavy variable 3/OR16-10 (non-functional)
hg19_v2_chr4_-_46911223_46911230	1.20903	PAX8	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr10_-_104597286_104597295	1.20336	PAX8	ENST00000369887.3|CYP17A1|ENSG00000148795.5|cytochrome P450, family 17, subfamily A, polypeptide 1
hg19_v2_chr6_+_161123270_161123278	1.19648	PAX8	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr11_+_64323156_64323165	1.18609	PAX8	ENST00000377585.3|SLC22A11|ENSG00000168065.11|solute carrier family 22 (organic anion/urate transporter), member 11
hg19_v2_chr6_+_43266063_43266097	1.16359	PAX8	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr3_-_150264272_150264428	1.16278	PAX8	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr3_+_186435137_186435158	1.12863	PAX8	ENST00000447445.1|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr6_+_72922505_72922516	1.11855	PAX8	ENST00000401910.3|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr21_-_35883541_35883609	1.11363	PAX8	ENST00000399284.1|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1
hg19_v2_chr1_-_186649543_186649563	1.11177	PAX8	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr22_+_38082330_38082381	1.10708	PAX8	ENST00000359114.4|NOL12|ENSG00000100101.13|nucleolar protein 12
hg19_v2_chr5_+_43603229_43603356	1.1054	PAX8	ENST00000344920.4|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase 	ENST00000512996.2|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase
hg19_v2_chr6_+_72926145_72926245	1.105	PAX8	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr8_+_31496809_31496902	1.08933	PAX8	ENST00000518104.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000519301.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr8_-_13372253_13372282	1.07946	PAX8	ENST00000316609.5|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr1_+_182419261_182419285	1.07381	PAX8	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr11_-_47870019_47870033	1.07235	PAX8	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr11_-_47869865_47869914	1.0719	PAX8	ENST00000530326.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa 	ENST00000532747.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr20_-_3762087_3762100	1.06608	PAX8	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chr11_+_113185292_113185325	1.05258	PAX8	ENST00000429951.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000442859.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000531164.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000529850.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000314756.3|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000525965.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12
hg19_v2_chr19_-_54804173_54804302	1.04119	PAX8	ENST00000391744.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 	ENST00000251390.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
hg19_v2_chr8_+_27168988_27169021	1.0181	PAX8	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr6_+_43739697_43739752	0.982246	PAX8	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr19_+_18794470_18794512	0.979922	PAX8	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr6_+_72922590_72922605	0.949381	PAX8	ENST00000523963.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr17_-_73505961_73505976	0.934335	PAX8	ENST00000433559.2|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr2_-_128615681_128615737	0.933466	PAX8	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr14_+_22446680_22446721	0.926115	PAX8	ENST00000390443.3|TRAV8-6|ENSG00000211795.3|T cell receptor alpha variable 8-6
hg19_v2_chr12_-_89919965_89919978	0.923208	PAX8	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr7_+_7606497_7606595	0.912048	PAX8	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr1_-_173176452_173176477	0.909805	PAX8	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr2_+_191334212_191334242	0.905304	PAX8	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr1_-_153514241_153514241	0.892338	PAX8	ENST00000368718.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5 	ENST00000359215.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr22_+_22730353_22730360	0.87341	PAX8	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chr7_+_149535455_149535555	0.862889	PAX8	ENST00000223210.4|ZNF862|ENSG00000106479.6|zinc finger protein 862 	ENST00000460379.1|ZNF862|ENSG00000106479.6|zinc finger protein 862
hg19_v2_chr15_+_67420441_67420606	0.855802	PAX8	ENST00000558894.1|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr17_-_27278304_27278408	0.848322	PAX8	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr4_-_75695366_75695366	0.82605	PAX8	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chr18_-_29264467_29264551	0.820268	PAX8	ENST00000383131.3|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 	ENST00000237019.7|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr12_+_26348582_26348606	0.816323	PAX8	ENST00000535504.1|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr12_-_86650077_86650095	0.786136	PAX8	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr1_+_171283331_171283373	0.777268	PAX8	ENST00000367749.3|FMO4|ENSG00000076258.5|flavin containing monooxygenase 4
hg19_v2_chr9_+_27109133_27109187	0.768447	PAX8	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr4_+_75230853_75230871	0.752901	PAX8	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr12_-_86650045_86650076	0.752294	PAX8	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr17_-_3499125_3499125	0.732874	PAX8	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr12_+_122516626_122516645	0.727548	PAX8	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr9_+_111624577_111624603	0.72123	PAX8	ENST00000333999.3|ACTL7A|ENSG00000187003.5|actin-like 7A
hg19_v2_chr7_+_143657027_143657027	0.719665	PAX8	ENST00000392899.1|OR2F1|ENSG00000213215.1|olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
hg19_v2_chr1_-_169703203_169703227	0.71746	PAX8	ENST00000333360.7|SELE|ENSG00000007908.11|selectin E 	ENST00000367781.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367782.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367780.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367779.4|SELE|ENSG00000007908.11|selectin E
hg19_v2_chr4_-_168155169_168155214	0.69602	PAX8	ENST00000534949.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000535728.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr11_+_113185251_113185278	0.693502	PAX8	ENST00000529221.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12
hg19_v2_chr12_+_7167980_7168040	0.69246	PAX8	ENST00000360817.5|C1S|ENSG00000182326.10|complement component 1, s subcomponent 	ENST00000402681.3|C1S|ENSG00000182326.10|complement component 1, s subcomponent
hg19_v2_chr2_+_185463093_185463181	0.681588	PAX8	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr19_-_7812397_7812426	0.664599	PAX8	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr7_-_99277610_99277626	0.654854	PAX8	ENST00000343703.5|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000222982.4|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000439761.1|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000339843.2|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v2_chr1_-_222763240_222763284	0.647787	PAX8	ENST00000352967.4|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000391882.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000543857.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
hg19_v2_chr18_-_29264669_29264717	0.621753	PAX8	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr4_-_16077741_16077760	0.616897	PAX8	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chrX_+_99839799_99839938	0.608785	PAX8	ENST00000373031.4|TNMD|ENSG00000000005.5|tenomodulin
hg19_v2_chr17_-_34257731_34257766	0.591068	PAX8	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr3_-_178969403_178969418	0.58391	PAX8	ENST00000314235.5|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000392685.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr6_+_167704838_167704952	0.5745	PAX8	ENST00000366829.2|UNC93A|ENSG00000112494.5|unc-93 homolog A (C. elegans)
hg19_v2_chr12_-_10251576_10251599	0.557627	PAX8	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr17_-_39646116_39646164	0.533508	PAX8	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr2_-_87248975_87248975	0.527085	PAX8	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr7_-_137686791_137686821	0.507596	PAX8	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr12_-_10251603_10251619	0.500272	PAX8	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr3_-_8811288_8811314	0.492645	PAX8	ENST00000316793.3|OXTR|ENSG00000180914.6|oxytocin receptor 	ENST00000431493.1|OXTR|ENSG00000180914.6|oxytocin receptor
hg19_v2_chr4_-_69536346_69536371	0.479513	PAX8	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr13_+_49684445_49684517	0.478614	PAX8	ENST00000398316.3|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr7_-_112430647_112430776	0.467881	PAX8	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr1_-_71513471_71513506	0.46157	PAX8	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr4_-_152682129_152682175	0.458104	PAX8	ENST00000512306.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000508611.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000515812.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000263985.6|PET112|ENSG00000059691.7|PET112 homolog (yeast)
hg19_v2_chr18_-_58040000_58040015	0.451123	PAX8	ENST00000299766.3|MC4R|ENSG00000166603.3|melanocortin 4 receptor
hg19_v2_chr14_+_23938891_23938953	0.447632	PAX8	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr19_+_42300548_42300559	0.431314	PAX8	ENST00000344550.4|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr17_-_74023291_74023312	0.415083	PAX8	ENST00000586740.1|EVPL|ENSG00000167880.3|envoplakin
hg19_v2_chr16_-_18911366_18911366	0.413794	PAX8	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr6_+_131571535_131571595	0.399186	PAX8	ENST00000474850.2|AKAP7|ENSG00000118507.11|A kinase (PRKA) anchor protein 7
hg19_v2_chr5_+_140235469_140235634	0.398135	PAX8	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr6_+_167704798_167704811	0.383048	PAX8	ENST00000230256.3|UNC93A|ENSG00000112494.5|unc-93 homolog A (C. elegans)
hg19_v2_chr4_-_145061788_145061904	0.37358	PAX8	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr22_+_23029188_23029205	0.352011	PAX8	ENST00000390305.2|IGLV3-25|ENSG00000211659.2|immunoglobulin lambda variable 3-25
hg19_v2_chr14_-_106610852_106610852	0.342356	PAX8	ENST00000390603.2|IGHV3-15|ENSG00000211943.2|immunoglobulin heavy variable 3-15
hg19_v2_chr12_+_75874460_75874549	0.342218	PAX8	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr21_-_43816052_43816116	0.341776	PAX8	ENST00000398405.1|TMPRSS3|ENSG00000160183.9|transmembrane protease, serine 3
hg19_v2_chr11_+_7618413_7618427	0.339829	PAX8	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr2_+_161993465_161993481	0.334082	PAX8	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr18_-_53068911_53068935	0.327542	PAX8	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_+_203734296_203734318	0.323953	PAX8	ENST00000442561.2|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1 	ENST00000367217.5|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1
hg19_v2_chr3_-_38835501_38835501	0.322978	PAX8	ENST00000449082.2|SCN10A|ENSG00000185313.6|sodium channel, voltage-gated, type X, alpha subunit
hg19_v2_chr8_-_124749609_124749658	0.308823	PAX8	ENST00000262219.6|ANXA13|ENSG00000104537.12|annexin A13 	ENST00000419625.1|ANXA13|ENSG00000104537.12|annexin A13
hg19_v2_chr4_+_154073469_154073645	0.30063	PAX8	ENST00000441616.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr3_-_189840223_189840229	0.278036	PAX8	ENST00000427335.2|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr17_-_80017856_80017970	0.270274	PAX8	ENST00000577574.1|DUS1L|ENSG00000169718.13|dihydrouridine synthase 1-like (S. cerevisiae)
hg19_v2_chr4_+_123747834_123747863	0.265888	PAX8	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr8_+_133787586_133787673	0.260904	PAX8	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr19_-_7812446_7812473	0.25882	PAX8	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr22_+_27017921_27017928	0.245864	PAX8	ENST00000354760.3|CRYBA4|ENSG00000196431.3|crystallin, beta A4
hg19_v2_chr9_-_128246769_128246780	0.245772	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr19_+_35630926_35631009	0.198581	PAX8	ENST00000588081.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1 	ENST00000589121.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr15_-_89010607_89010650	0.194265	PAX8	ENST00000312475.4|MRPL46|ENSG00000259494.1|mitochondrial ribosomal protein L46
hg19_v2_chr3_+_11178779_11178942	0.187025	PAX8	ENST00000438284.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr11_-_2170786_2170833	0.185288	PAX8	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr16_-_87350970_87351006	0.181676	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chr7_-_144533074_144533153	0.145983	PAX8	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr11_+_12766583_12766592	0.144316	PAX8	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr19_+_9361606_9361606	0.137693	PAX8	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr9_-_98269481_98269691	0.131599	PAX8	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr8_+_120079478_120079499	0.118143	PAX8	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr2_+_62900986_62901019	0.118	PAX8	ENST00000405015.3|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000413434.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000426940.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000449820.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1
hg19_v2_chr4_+_72204755_72204778	0.11331	PAX8	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr9_+_71944241_71944241	0.110612	PAX8	ENST00000257515.8|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr8_+_124428959_124428971	0.10492	PAX8	ENST00000287387.2|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523984.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr3_-_127842612_127842680	0.093041	PAX8	ENST00000417360.1|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1 	ENST00000322623.5|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1
hg19_v2_chr11_-_102401469_102401488	0.0913026	PAX8	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr14_-_91710852_91710893	0.0761051	PAX8	ENST00000535815.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000529102.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr17_+_1933404_1933457	0.0707583	PAX8	ENST00000263083.6|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1 	ENST00000571418.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr19_+_12862604_12862625	0.0680431	PAX8	ENST00000553030.1|BEST2|ENSG00000039987.2|bestrophin 2
hg19_v2_chr10_+_12391685_12391734	0.0334085	PAX8	ENST00000378845.1|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr19_+_40476912_40476939	0.0306378	PAX8	ENST00000157812.2|PSMC4|ENSG00000013275.3|proteasome (prosome, macropain) 26S subunit, ATPase, 4
hg19_v2_chr10_+_103912137_103912172	0.0284723	PAX8	ENST00000603742.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000488254.2|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000461421.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000476468.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000370007.5|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1
hg19_v2_chr19_-_55791540_55791549	0.021538	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr9_+_131549610_131549629	0.0175863	PAX8	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr21_-_43786634_43786703	0.0033547	PAX8	ENST00000291527.2|TFF1|ENSG00000160182.2|trefoil factor 1
