hg19_v2_chr1_-_153643442_153643524	28.2717	SOX9	ENST00000368681.1|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2 	ENST00000361891.4|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2
hg19_v2_chr17_-_73149921_73149971	28.2679	SOX9	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr1_-_26232951_26232959	22.9677	SOX9	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr7_+_77167376_77167395	21.9542	SOX9	ENST00000435495.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr12_+_49621658_49621709	20.0684	SOX9	ENST00000541364.1|TUBA1C|ENSG00000167553.10|tubulin, alpha 1c
hg19_v2_chr2_-_61765315_61765422	19.3832	SOX9	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr6_-_128841503_128841870	19.143	SOX9	ENST00000368215.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000532331.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368213.5|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368207.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000525459.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368210.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368226.4|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368227.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K
hg19_v2_chr9_+_80912059_80912081	18.3008	SOX9	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr8_-_101965559_101965570	17.9297	SOX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr6_+_30687978_30688141	16.7371	SOX9	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr16_+_89989687_89989774	16.37	SOX9	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr1_-_26232522_26232644	15.6852	SOX9	ENST00000399728.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr12_+_69979113_69979155	15.305	SOX9	ENST00000299300.6|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr15_+_52311398_52311461	15.0288	SOX9	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr12_+_69979210_69979252	14.9146	SOX9	ENST00000544368.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr1_-_26233423_26233482	14.8865	SOX9	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr5_+_159848807_159848847	14.794	SOX9	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr6_+_114178512_114178586	14.1626	SOX9	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr3_-_149688502_149688526	13.818	SOX9	ENST00000481767.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000475518.1|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr12_+_69979446_69979471	13.7925	SOX9	ENST00000543146.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr1_+_10459111_10459175	13.747	SOX9	ENST00000541529.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000270776.8|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000483936.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000538557.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase
hg19_v2_chr3_-_149688896_149688970	13.5276	SOX9	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr2_-_151344172_151344243	13.32	SOX9	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr1_-_113247543_113247770	12.8968	SOX9	ENST00000414971.1|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000534717.1|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr11_-_46867780_46867848	12.6417	SOX9	ENST00000529230.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5 	ENST00000415402.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5 	ENST00000312055.5|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5
hg19_v2_chr1_-_19426149_19426221	12.4122	SOX9	ENST00000429347.2|UBR4|ENSG00000127481.10|ubiquitin protein ligase E3 component n-recognin 4
hg19_v2_chr5_+_159848854_159848917	12.1405	SOX9	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr7_+_12727250_12727265	11.7969	SOX9	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr3_-_149688655_149688737	11.2726	SOX9	ENST00000461930.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000423691.2|PFN2|ENSG00000070087.9|profilin 2 	ENST00000490975.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000461868.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000452853.2|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr8_+_98656336_98656535	11.2707	SOX9	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr19_+_16187816_16187838	11.25	SOX9	ENST00000588410.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr16_+_3068393_3068446	11.2224	SOX9	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr5_+_74632993_74633028	11.1439	SOX9	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr2_+_102314161_102314206	11.1346	SOX9	ENST00000425019.1|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr2_-_55277436_55277464	11.0574	SOX9	ENST00000354474.6|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr12_-_49582978_49583107	11.0006	SOX9	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr12_-_49582593_49582682	10.981	SOX9	ENST00000295766.5|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr2_-_55276320_55276334	10.9541	SOX9	ENST00000357376.3|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr2_-_55277692_55277734	10.7952	SOX9	ENST00000394611.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr18_+_3449821_3450034	10.7123	SOX9	ENST00000407501.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000405385.3|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000546979.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr2_-_55277512_55277533	10.5739	SOX9	ENST00000402434.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chrX_+_48380205_48380257	10.5712	SOX9	ENST00000446158.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase) 	ENST00000414061.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase)
hg19_v2_chr2_+_10262857_10262873	10.5465	SOX9	ENST00000304567.5|RRM2|ENSG00000171848.9|ribonucleotide reductase M2
hg19_v2_chr1_+_10271674_10271674	10.4282	SOX9	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr2_-_200323414_200323468	10.3929	SOX9	ENST00000443023.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr5_+_74633036_74633085	10.0444	SOX9	ENST00000343975.5|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr4_+_41614909_41614926	9.99914	SOX9	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr2_-_55277654_55277685	9.85775	SOX9	ENST00000337526.6|RTN4|ENSG00000115310.13|reticulon 4 	ENST00000317610.7|RTN4|ENSG00000115310.13|reticulon 4 	ENST00000357732.4|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr11_-_102323489_102323576	9.83076	SOX9	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr10_+_70748487_70748498	9.8237	SOX9	ENST00000361983.4|KIAA1279|ENSG00000198954.4|KIAA1279
hg19_v2_chr6_-_53213780_53213947	9.811	SOX9	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr5_-_146833485_146833522	9.74509	SOX9	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr2_+_74425689_74425749	9.67209	SOX9	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr1_-_197115818_197115829	9.50785	SOX9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr12_+_69633372_69633396	9.42435	SOX9	ENST00000456847.3|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa 	ENST00000266679.8|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr10_+_102106829_102106881	9.42089	SOX9	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chr1_+_165797024_165797069	9.40353	SOX9	ENST00000372212.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr11_+_63953691_63953713	9.13514	SOX9	ENST00000543847.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr14_+_52456327_52456344	9.04751	SOX9	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr6_-_79944336_79944440	9.01507	SOX9	ENST00000344726.5|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3 	ENST00000275036.7|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3
hg19_v2_chr7_+_134464414_134464429	8.9355	SOX9	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_+_155293702_155293729	8.86274	SOX9	ENST00000368347.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr17_+_26646175_26646295	8.85991	SOX9	ENST00000583381.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582113.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582384.1|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr11_+_60691924_60691966	8.8481	SOX9	ENST00000544065.1|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000453848.2|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000005286.4|TMEM132A|ENSG00000006118.10|transmembrane protein 132A
hg19_v2_chr16_-_19533404_19533467	8.7541	SOX9	ENST00000353258.3|GDE1|ENSG00000006007.7|glycerophosphodiester phosphodiesterase 1
hg19_v2_chr12_-_49075941_49076001	8.65486	SOX9	ENST00000553086.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000548304.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2
hg19_v2_chr7_+_129710350_129710434	8.61558	SOX9	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr10_-_104953009_104953061	8.59372	SOX9	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr2_-_37899323_37899374	8.59328	SOX9	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr8_-_80993010_80993073	8.45899	SOX9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr1_-_155880672_155880715	8.41562	SOX9	ENST00000609492.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368322.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr4_+_41614720_41614734	8.27694	SOX9	ENST00000509277.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr11_+_34073269_34073287	8.21176	SOX9	ENST00000389645.3|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr14_+_52456193_52456320	8.13457	SOX9	ENST00000261700.3|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr17_+_35851570_35851667	7.93215	SOX9	ENST00000394386.1|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr11_-_102323740_102323780	7.89536	SOX9	ENST00000398136.2|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr1_-_246580705_246580737	7.8912	SOX9	ENST00000541742.1|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr2_-_175869936_175869954	7.84906	SOX9	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr5_-_16936340_16936418	7.76389	SOX9	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr15_-_64673630_64673648	7.64784	SOX9	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr10_+_6244829_6244904	7.60111	SOX9	ENST00000317350.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379785.1|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379782.3|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000360521.2|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379775.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v2_chr17_-_73505961_73505976	7.59803	SOX9	ENST00000433559.2|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr8_-_101965146_101965236	7.56371	SOX9	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr20_-_45984401_45984514	7.52335	SOX9	ENST00000311275.7|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr10_+_94050913_94050965	7.4016	SOX9	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr1_+_155294264_155294332	7.37626	SOX9	ENST00000368349.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr11_+_34073195_34073266	7.3106	SOX9	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr17_-_39684550_39684567	7.24293	SOX9	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr7_+_128379346_128379447	7.23916	SOX9	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr1_+_155294342_155294368	7.23824	SOX9	ENST00000292254.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr12_-_49076002_49076043	7.21692	SOX9	ENST00000357861.3|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000550347.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000420613.2|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000550931.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000550870.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2
hg19_v2_chr1_+_50571949_50571964	7.14554	SOX9	ENST00000357083.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr17_-_49124230_49124248	7.05465	SOX9	ENST00000510283.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000510855.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr18_+_3451646_3451722	7.03207	SOX9	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr1_+_33116765_33117088	7.03039	SOX9	ENST00000544435.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373485.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000458695.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000490500.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000445722.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr17_+_26646121_26646133	7.00138	SOX9	ENST00000226230.6|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr7_+_16685756_16685820	6.94646	SOX9	ENST00000415365.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000258761.3|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000433922.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000452975.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000405202.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr15_+_41624892_41625111	6.91797	SOX9	ENST00000260359.6|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450318.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450592.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000559596.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000414849.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560747.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560177.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1
hg19_v2_chr10_-_13390270_13390316	6.90284	SOX9	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr7_-_16685422_16685448	6.85399	SOX9	ENST00000306999.2|ANKMY2|ENSG00000106524.4|ankyrin repeat and MYND domain containing 2
hg19_v2_chr7_+_134464376_134464413	6.84208	SOX9	ENST00000454108.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000361675.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr6_+_119215308_119215391	6.74266	SOX9	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr7_-_131241361_131241398	6.7383	SOX9	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr12_+_69633407_69633422	6.72605	SOX9	ENST00000551516.1|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr14_+_102276209_102276242	6.68948	SOX9	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_-_243418344_243418356	6.59342	SOX9	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr7_+_128379449_128379463	6.42374	SOX9	ENST00000479257.1|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr13_+_53029564_53029650	6.41489	SOX9	ENST00000468284.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378034.3|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000258607.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378037.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr8_+_98656693_98656774	6.35206	SOX9	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr10_-_129924611_129924662	6.1759	SOX9	ENST00000368654.3|MKI67|ENSG00000148773.8|marker of proliferation Ki-67
hg19_v2_chr3_-_182698381_182698431	6.08517	SOX9	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr1_-_115259337_115259515	6.01318	SOX9	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr3_-_57583052_57583079	5.93833	SOX9	ENST00000496292.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4 	ENST00000489843.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr17_+_33914460_33914536	5.92753	SOX9	ENST00000537622.2|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr1_+_33116743_33116754	5.89017	SOX9	ENST00000414241.3|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373493.5|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr1_-_243418621_243418648	5.85818	SOX9	ENST00000366544.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000366543.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr7_-_99699538_99699563	5.7724	SOX9	ENST00000343023.6|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7 	ENST00000303887.5|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7
hg19_v2_chr1_-_225840747_225840860	5.75053	SOX9	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr22_+_19419425_19419425	5.72815	SOX9	ENST00000333130.3|MRPL40|ENSG00000185608.4|mitochondrial ribosomal protein L40
hg19_v2_chr9_+_108463234_108463265	5.7253	SOX9	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr1_-_32801825_32801980	5.701	SOX9	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chrX_-_15872914_15873054	5.64966	SOX9	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chrX_-_20159934_20159976	5.58419	SOX9	ENST00000379593.1|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked 	ENST00000379607.5|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked
hg19_v2_chr19_+_24009879_24009921	5.56477	SOX9	ENST00000354585.4|RPSAP58|ENSG00000205246.4|ribosomal protein SA pseudogene 58
hg19_v2_chrX_-_135962876_135962896	5.56346	SOX9	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr1_+_93913713_93913839	5.49548	SOX9	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chrX_-_16888448_16888537	5.46102	SOX9	ENST00000468092.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000404022.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000380087.2|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr2_-_86422523_86422595	5.45094	SOX9	ENST00000442664.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000409051.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000449247.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial
hg19_v2_chr13_-_31040060_31040102	5.41698	SOX9	ENST00000326004.4|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000341423.5|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr11_+_63953587_63953685	5.41417	SOX9	ENST00000305218.4|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1 	ENST00000538945.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr8_+_26435359_26435426	5.32703	SOX9	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr17_+_33914276_33914386	5.32424	SOX9	ENST00000592545.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000538556.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000312678.8|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000589344.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr1_+_68150744_68150890	5.31845	SOX9	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr7_+_5632436_5632454	5.31407	SOX9	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr1_-_21503337_21503407	5.28191	SOX9	ENST00000400422.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000602326.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000411888.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000438975.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr5_-_146833222_146833261	5.25973	SOX9	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr15_-_41624685_41624819	5.16782	SOX9	ENST00000560640.1|OIP5|ENSG00000104147.4|Opa interacting protein 5 	ENST00000220514.3|OIP5|ENSG00000104147.4|Opa interacting protein 5
hg19_v2_chr12_+_54378923_54378970	5.14551	SOX9	ENST00000303460.4|HOXC10|ENSG00000180818.4|homeobox C10
hg19_v2_chr17_-_40306934_40307035	5.13823	SOX9	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr1_+_150039369_150039444	5.13293	SOX9	ENST00000369130.3|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae) 	ENST00000369128.5|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v2_chr17_+_75372165_75372357	5.11558	SOX9	ENST00000427674.2|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr5_+_140739537_140739703	5.07337	SOX9	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chrX_+_70503037_70503095	5.0666	SOX9	ENST00000535149.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr18_-_34408693_34408780	5.00544	SOX9	ENST00000587382.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000589049.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000587129.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr17_+_36861735_36861795	4.92726	SOX9	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr3_-_57583130_57583152	4.84589	SOX9	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr12_-_31479045_31479074	4.77446	SOX9	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr4_-_83350580_83350600	4.7325	SOX9	ENST00000349655.4|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like 	ENST00000602300.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr7_-_107643674_107643700	4.6915	SOX9	ENST00000222399.6|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr3_+_196466710_196466824	4.63908	SOX9	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr3_-_48754599_48754711	4.59987	SOX9	ENST00000413654.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000454335.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000440424.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449610.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443964.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000417896.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000413298.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449563.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443853.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000437427.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000446860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000412850.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000424035.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000340879.4|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000431721.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000434860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000328631.5|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000432678.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chr4_-_83351294_83351417	4.55675	SOX9	ENST00000502762.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr11_+_111807863_111807937	4.55098	SOX9	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr8_+_133787586_133787673	4.50715	SOX9	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chrX_-_153599578_153599656	4.46392	SOX9	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr9_+_2622085_2622174	4.45953	SOX9	ENST00000382099.2|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr11_+_125496619_125496646	4.44497	SOX9	ENST00000532669.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000278916.3|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr7_+_69064300_69064342	4.41562	SOX9	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr19_-_1568057_1568142	4.41248	SOX9	ENST00000402693.4|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D 	ENST00000388824.6|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D
hg19_v2_chr2_-_2334888_2335053	4.40408	SOX9	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr4_-_76598296_76598318	4.35159	SOX9	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_+_200708671_200708744	4.28553	SOX9	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr21_-_40720974_40720994	4.26239	SOX9	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr2_+_54683419_54683442	4.21669	SOX9	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr12_+_49212514_49212692	4.14175	SOX9	ENST00000301050.2|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit 	ENST00000548279.1|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit 	ENST00000547230.1|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit
hg19_v2_chr2_-_1748214_1748295	4.11139	SOX9	ENST00000433670.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000425171.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000252804.4|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila)
hg19_v2_chr16_+_14802801_14802801	4.10489	SOX9	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr18_-_34409116_34409158	4.08978	SOX9	ENST00000334295.4|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr14_+_75230011_75230120	4.04062	SOX9	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr18_-_34408902_34409022	3.97912	SOX9	ENST00000593035.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000383056.3|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000588909.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000590337.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr20_-_43150601_43150751	3.95668	SOX9	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr15_-_37392703_37392717	3.94131	SOX9	ENST00000382766.2|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000444725.1|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr1_+_164528866_164528877	3.89938	SOX9	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr9_-_139760717_139760728	3.85345	SOX9	ENST00000371648.4|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1
hg19_v2_chr3_+_9439400_9439414	3.82007	SOX9	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chrX_+_12993336_12993363	3.79244	SOX9	ENST00000380635.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr17_-_56605341_56605363	3.78676	SOX9	ENST00000583114.1|SEPT4|ENSG00000108387.10|septin 4
hg19_v2_chrX_+_41192595_41192651	3.77457	SOX9	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr5_+_140797296_140797427	3.71176	SOX9	ENST00000398594.2|PCDHGB7|ENSG00000254122.1|protocadherin gamma subfamily B, 7
hg19_v2_chr8_+_126442563_126442624	3.64346	SOX9	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr11_+_64949899_64949941	3.64267	SOX9	ENST00000531068.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527699.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000533909.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527323.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr3_+_9439579_9439592	3.6421	SOX9	ENST00000406341.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr8_+_11660120_11660221	3.61521	SOX9	ENST00000220584.4|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr21_-_40720995_40721126	3.60275	SOX9	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr18_-_21891460_21891506	3.54746	SOX9	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr7_+_16793160_16793160	3.50096	SOX9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chr5_-_43313574_43313614	3.49619	SOX9	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr19_+_45394477_45394546	3.49028	SOX9	ENST00000252487.5|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000405636.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000592434.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000426677.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000589649.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v2_chr7_+_23146271_23146285	3.49027	SOX9	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr16_+_67261008_67261073	3.46719	SOX9	ENST00000304800.9|TMEM208|ENSG00000168701.14|transmembrane protein 208 	ENST00000563953.1|TMEM208|ENSG00000168701.14|transmembrane protein 208 	ENST00000565201.1|TMEM208|ENSG00000168701.14|transmembrane protein 208
hg19_v2_chr20_-_34330129_34330234	3.43463	SOX9	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr16_+_22524844_22525003	3.39205	SOX9	ENST00000538606.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000424340.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000517539.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000528249.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr19_-_17375541_17375605	3.37931	SOX9	ENST00000252597.3|USHBP1|ENSG00000130307.7|Usher syndrome 1C binding protein 1
hg19_v2_chr14_+_55518349_55518423	3.35282	SOX9	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr7_-_44887620_44887710	3.34711	SOX9	ENST00000349299.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000521529.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000308153.4|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000350771.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000222690.6|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000381124.5|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000437072.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000446531.1|H2AFV|ENSG00000105968.14|H2A histone family, member V
hg19_v2_chr2_+_160568978_160569064	3.31547	SOX9	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr8_+_11660227_11660306	3.28863	SOX9	ENST00000443614.2|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525900.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr7_+_18535346_18535399	3.2857	SOX9	ENST00000405010.3|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000406451.4|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000428307.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr1_-_117210290_117210376	3.24739	SOX9	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr19_-_8070474_8070564	3.21749	SOX9	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr7_+_26191809_26191890	3.12872	SOX9	ENST00000056233.3|NFE2L3|ENSG00000050344.8|nuclear factor, erythroid 2-like 3
hg19_v2_chr14_+_39644387_39644417	3.12101	SOX9	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr4_+_154125565_154125626	3.10445	SOX9	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr15_-_64673665_64673709	3.09679	SOX9	ENST00000300035.4|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr8_+_42195972_42195991	3.07866	SOX9	ENST00000532157.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000265421.4|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000520008.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr2_+_109271481_109271509	3.0717	SOX9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr2_-_65357225_65357267	3.06729	SOX9	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr5_+_76011868_76012005	3.0603	SOX9	ENST00000319211.4|F2R|ENSG00000181104.6|coagulation factor II (thrombin) receptor
hg19_v2_chr2_-_201828356_201828412	2.97541	SOX9	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr9_+_134269439_134269506	2.97225	SOX9	ENST00000405995.1|PRRC2B|ENSG00000130723.13|proline-rich coiled-coil 2B
hg19_v2_chr3_-_124839648_124839709	2.96887	SOX9	ENST00000430155.2|SLC12A8|ENSG00000221955.6|solute carrier family 12, member 8
hg19_v2_chr8_+_42196000_42196021	2.91781	SOX9	ENST00000518925.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000538005.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr6_-_27114577_27114642	2.88367	SOX9	ENST00000356950.1|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk 	ENST00000396891.4|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk
hg19_v2_chr5_+_140729649_140729828	2.85765	SOX9	ENST00000523390.1|PCDHGB1|ENSG00000254221.1|protocadherin gamma subfamily B, 1
hg19_v2_chr18_+_7946941_7946952	2.84842	SOX9	ENST00000444013.1|PTPRM|ENSG00000173482.12|protein tyrosine phosphatase, receptor type, M
hg19_v2_chr7_+_77167343_77167369	2.84715	SOX9	ENST00000433369.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12 	ENST00000415482.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr7_+_155090271_155090382	2.84657	SOX9	ENST00000476756.1|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr12_-_118797475_118797527	2.84258	SOX9	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr7_+_138145145_138145209	2.82441	SOX9	ENST00000415680.2|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr1_-_31538517_31538632	2.81388	SOX9	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr5_+_179159813_179159851	2.74308	SOX9	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr1_+_25071848_25071944	2.73445	SOX9	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr10_+_22605374_22605387	2.73114	SOX9	ENST00000448361.1|COMMD3|ENSG00000148444.11|COMM domain containing 3
hg19_v2_chr3_-_185826855_185826911	2.71848	SOX9	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chr6_+_64282447_64282586	2.617	SOX9	ENST00000370650.2|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1 	ENST00000578299.1|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chrX_+_107288197_107288212	2.61472	SOX9	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr17_-_7297519_7297593	2.61358	SOX9	ENST00000576362.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000571078.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr5_-_146435501_146435537	2.57134	SOX9	ENST00000336640.6|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr3_+_49058444_49058618	2.54009	SOX9	ENST00000326925.6|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 	ENST00000395458.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chrX_-_38080077_38080177	2.52825	SOX9	ENST00000378533.3|SRPX|ENSG00000101955.10|sushi-repeat containing protein, X-linked 	ENST00000544439.1|SRPX|ENSG00000101955.10|sushi-repeat containing protein, X-linked 	ENST00000432886.2|SRPX|ENSG00000101955.10|sushi-repeat containing protein, X-linked 	ENST00000538295.1|SRPX|ENSG00000101955.10|sushi-repeat containing protein, X-linked
hg19_v2_chr11_-_33183006_33183046	2.47865	SOX9	ENST00000524827.1|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000323959.4|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000431742.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr1_+_155579979_155580032	2.47358	SOX9	ENST00000452804.2|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000538143.1|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000245564.2|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000368341.4|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator
hg19_v2_chr11_+_64949343_64949454	2.43964	SOX9	ENST00000279247.6|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000532285.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000534373.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr1_-_68698222_68698266	2.42512	SOX9	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr12_-_8815215_8815298	2.40157	SOX9	ENST00000544889.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000543369.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr5_-_146435572_146435590	2.37084	SOX9	ENST00000394414.1|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr19_+_36359341_36359352	2.31747	SOX9	ENST00000221891.4|APLP1|ENSG00000105290.7|amyloid beta (A4) precursor-like protein 1
hg19_v2_chr6_+_26183958_26184005	2.31203	SOX9	ENST00000356530.3|HIST1H2BE|ENSG00000197697.3|histone cluster 1, H2be
hg19_v2_chr9_-_74979420_74979580	2.29695	SOX9	ENST00000343431.2|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376956.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr10_+_91461337_91461380	2.28153	SOX9	ENST00000260753.4|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000416354.1|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000394289.2|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000371728.3|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr5_-_146889619_146889639	2.26825	SOX9	ENST00000343218.5|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr9_-_139760737_139760769	2.26351	SOX9	ENST00000371649.1|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1 	ENST00000224073.1|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1
hg19_v2_chr7_+_116312411_116312502	2.25375	SOX9	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr1_-_68698197_68698214	2.25213	SOX9	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr5_+_140602904_140603078	2.24841	SOX9	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr2_+_170590321_170590408	2.12432	SOX9	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr13_+_42846272_42846334	2.08509	SOX9	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr16_-_73093597_73093597	2.047	SOX9	ENST00000397992.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr2_+_86668464_86668584	2.0457	SOX9	ENST00000409064.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chrX_+_107288239_107288259	2.03903	SOX9	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr12_-_8815299_8815331	2.02195	SOX9	ENST00000535336.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr12_+_22778009_22778112	2.00928	SOX9	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr17_+_57642886_57643006	1.99219	SOX9	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr16_+_524850_524883	1.98726	SOX9	ENST00000450428.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II) 	ENST00000452814.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr3_+_69985734_69985754	1.96099	SOX9	ENST00000314557.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000394351.3|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr10_+_73724123_73724206	1.95244	SOX9	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr12_+_22778116_22778139	1.95178	SOX9	ENST00000538218.1|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr17_-_38210644_38210675	1.95067	SOX9	ENST00000394128.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000394127.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000356271.3|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000535071.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000580885.1|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000543759.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000537674.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000580517.1|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000578161.1|MED24|ENSG00000008838.13|mediator complex subunit 24
hg19_v2_chr18_-_31802282_31802282	1.93397	SOX9	ENST00000535475.1|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr2_+_46926048_46926095	1.84806	SOX9	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr8_+_61429416_61429502	1.84401	SOX9	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr15_+_84115868_84115980	1.81431	SOX9	ENST00000427482.2|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3
hg19_v2_chr13_+_98795505_98795522	1.81152	SOX9	ENST00000319562.6|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr3_-_11623804_11623865	1.78118	SOX9	ENST00000451674.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr11_+_120255997_120256048	1.75143	SOX9	ENST00000532993.1|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr11_-_10830463_10830494	1.71078	SOX9	ENST00000527419.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530211.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530702.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000524932.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000532570.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr12_+_49761224_49761259	1.69141	SOX9	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr1_+_16085244_16085255	1.68483	SOX9	ENST00000400773.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr20_-_30310336_30310400	1.68256	SOX9	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr6_-_105850937_105850983	1.66762	SOX9	ENST00000369110.3|PREP|ENSG00000085377.9|prolyl endopeptidase
hg19_v2_chr4_-_110723134_110723181	1.64354	SOX9	ENST00000510800.1|CFI|ENSG00000205403.8|complement factor I 	ENST00000512148.1|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr17_-_7297833_7297889	1.62833	SOX9	ENST00000571802.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000576201.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000573213.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000324822.11|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr17_+_46970178_46970180	1.62142	SOX9	ENST00000393366.2|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000506855.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr17_+_46970134_46970170	1.60892	SOX9	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr10_+_63661053_63661079	1.60556	SOX9	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr7_+_138145076_138145116	1.50825	SOX9	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr10_+_104535994_104536014	1.5052	SOX9	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr13_+_98795434_98795480	1.48812	SOX9	ENST00000376586.2|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr17_+_46970127_46970132	1.46248	SOX9	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr17_+_75447326_75447457	1.46232	SOX9	ENST00000591088.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr12_+_56435637_56435745	1.44927	SOX9	ENST00000356464.5|RPS26|ENSG00000197728.5|ribosomal protein S26 	ENST00000552361.1|RPS26|ENSG00000197728.5|ribosomal protein S26
hg19_v2_chr3_+_49507559_49507580	1.39326	SOX9	ENST00000421560.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000308775.2|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000545947.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000541308.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000539901.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000538711.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000418588.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1)
hg19_v2_chr19_-_44124019_44124030	1.3316	SOX9	ENST00000300811.3|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr5_-_146435694_146435705	1.3224	SOX9	ENST00000356826.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr5_+_137688285_137688429	1.28875	SOX9	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr1_+_228337553_228337602	1.25294	SOX9	ENST00000366714.2|GJC2|ENSG00000198835.3|gap junction protein, gamma 2, 47kDa
hg19_v2_chr12_-_81763127_81763171	1.23926	SOX9	ENST00000541017.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr11_-_10829851_10829860	1.23751	SOX9	ENST00000532082.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr16_-_15474904_15474904	1.23609	SOX9	ENST00000534094.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr12_-_25055177_25055258	1.22601	SOX9	ENST00000538118.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr7_+_111846643_111846704	1.22549	SOX9	ENST00000361822.3|ZNF277|ENSG00000198839.5|zinc finger protein 277
hg19_v2_chr10_+_22605304_22605372	1.20898	SOX9	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr18_+_56530794_56530845	1.20805	SOX9	ENST00000590285.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000586085.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000589288.1|ZNF532|ENSG00000074657.9|zinc finger protein 532
hg19_v2_chr17_-_62308087_62308116	1.19304	SOX9	ENST00000583097.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr7_+_44788146_44788181	1.17981	SOX9	ENST00000413916.1|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2
hg19_v2_chr17_-_4871085_4871167	1.16288	SOX9	ENST00000575142.1|SPAG7|ENSG00000091640.3|sperm associated antigen 7 	ENST00000206020.3|SPAG7|ENSG00000091640.3|sperm associated antigen 7
hg19_v2_chr12_-_122985494_122985543	1.14827	SOX9	ENST00000336229.4|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr6_+_84569359_84569445	1.13715	SOX9	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chr4_-_110723335_110723356	1.13571	SOX9	ENST00000394634.2|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr6_+_43457317_43457360	1.13333	SOX9	ENST00000438588.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral)
hg19_v2_chr10_+_74033672_74033688	1.11925	SOX9	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr4_-_110723194_110723207	1.11753	SOX9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chrX_-_110654147_110654194	1.10906	SOX9	ENST00000358070.4|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr7_+_120591170_120591244	1.09725	SOX9	ENST00000431467.1|ING3|ENSG00000071243.11|inhibitor of growth family, member 3
hg19_v2_chr2_-_54197915_54197977	1.08379	SOX9	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr3_-_123339418_123339473	1.07635	SOX9	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr22_+_38864041_38864150	1.04091	SOX9	ENST00000216014.4|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 	ENST00000409006.3|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v2_chr8_+_104831472_104831510	1.03549	SOX9	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr1_-_152297679_152297722	1.0182	SOX9	ENST00000368799.1|FLG|ENSG00000143631.10|filaggrin
hg19_v2_chr15_-_34659349_34659479	1.00623	SOX9	ENST00000314891.6|LPCAT4|ENSG00000176454.9|lysophosphatidylcholine acyltransferase 4
hg19_v2_chr6_+_148663729_148663847	0.98272	SOX9	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr5_+_140593509_140593509	0.978429	SOX9	ENST00000341948.4|PCDHB13|ENSG00000187372.9|protocadherin beta 13
hg19_v2_chr7_-_22233442_22233527	0.958196	SOX9	ENST00000401957.2|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chrX_+_129473916_129474026	0.955566	SOX9	ENST00000545805.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000543953.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000218197.5|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr12_-_91398796_91398808	0.955235	SOX9	ENST00000261172.3|EPYC|ENSG00000083782.3|epiphycan 	ENST00000551767.1|EPYC|ENSG00000083782.3|epiphycan
hg19_v2_chr3_-_52001448_52001478	0.951858	SOX9	ENST00000461554.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000395013.3|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000428823.2|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000483411.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000461544.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000355852.2|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4
hg19_v2_chr6_+_13272904_13272989	0.950461	SOX9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr3_-_123339343_123339401	0.946153	SOX9	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr5_+_140767452_140767452	0.943876	SOX9	ENST00000519479.1|PCDHGB4|ENSG00000253953.1|protocadherin gamma subfamily B, 4
hg19_v2_chr9_+_35829208_35829308	0.940515	SOX9	ENST00000439587.2|TMEM8B|ENSG00000137103.12|transmembrane protein 8B 	ENST00000377991.4|TMEM8B|ENSG00000137103.12|transmembrane protein 8B
hg19_v2_chr16_-_67514982_67515140	0.914439	SOX9	ENST00000565835.1|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 	ENST00000540149.1|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 	ENST00000290949.3|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
hg19_v2_chr12_+_49761273_49761330	0.911784	SOX9	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr7_-_148725733_148725759	0.911637	SOX9	ENST00000286091.4|PDIA4|ENSG00000155660.6|protein disulfide isomerase family A, member 4
hg19_v2_chr19_-_44123734_44123796	0.909126	SOX9	ENST00000598676.1|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr17_+_67498538_67498570	0.900942	SOX9	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr3_+_51422478_51422478	0.894462	SOX9	ENST00000528157.1|MANF|ENSG00000145050.11|mesencephalic astrocyte-derived neurotrophic factor
hg19_v2_chr15_+_80696666_80696700	0.892697	SOX9	ENST00000303329.4|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v2_chr22_+_38142235_38142297	0.892328	SOX9	ENST00000407319.2|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein 	ENST00000403663.2|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein 	ENST00000428075.1|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr7_-_150924121_150924332	0.890049	SOX9	ENST00000441774.1|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2 	ENST00000222388.2|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2 	ENST00000287844.2|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v2_chr16_+_15528332_15528385	0.884666	SOX9	ENST00000566490.1|C16orf45|ENSG00000166780.6|chromosome 16 open reading frame 45
hg19_v2_chr2_+_232573222_232573249	0.87877	SOX9	ENST00000341369.7|PTMA|ENSG00000187514.10|prothymosin, alpha 	ENST00000409683.1|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr6_-_11232891_11232915	0.852973	SOX9	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr22_-_22292934_22292967	0.840395	SOX9	ENST00000538191.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000424647.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000407142.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr8_-_95449155_95449188	0.828101	SOX9	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr5_-_39425222_39425283	0.826841	SOX9	ENST00000320816.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr18_+_72163443_72163521	0.809983	SOX9	ENST00000324262.4|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000580672.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr22_-_50524298_50524331	0.797809	SOX9	ENST00000311597.5|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr18_+_72163536_72163646	0.795722	SOX9	ENST00000579847.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000583203.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000581513.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000577600.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000579583.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000584613.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr1_-_53018654_53018777	0.790798	SOX9	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr10_-_105845674_105845760	0.789598	SOX9	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr7_-_111846435_111846471	0.782264	SOX9	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr5_+_140248518_140248689	0.780605	SOX9	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr17_+_27573875_27573881	0.773972	SOX9	ENST00000225387.3|CRYBA1|ENSG00000108255.3|crystallin, beta A1
hg19_v2_chr14_+_32546274_32546295	0.72649	SOX9	ENST00000396582.2|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chrX_+_135579670_135579715	0.723607	SOX9	ENST00000218364.4|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr11_-_35441524_35441578	0.647305	SOX9	ENST00000395750.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENST00000449068.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr5_-_39425068_39425098	0.638257	SOX9	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr7_-_27219849_27219880	0.623242	SOX9	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr22_-_50523760_50523787	0.617901	SOX9	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr3_-_128294929_128294929	0.602921	SOX9	ENST00000356020.2|C3orf27|ENSG00000198685.2|chromosome 3 open reading frame 27
hg19_v2_chr16_+_3019552_3019559	0.58923	SOX9	ENST00000572687.1|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr10_+_97803151_97803348	0.589109	SOX9	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr4_+_78079450_78079563	0.586079	SOX9	ENST00000395640.1|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000512918.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr3_-_50365607_50365676	0.585661	SOX9	ENST00000232496.4|TUSC2|ENSG00000114383.5|tumor suppressor candidate 2
hg19_v2_chr7_-_14942944_14942997	0.576695	SOX9	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr1_-_157014865_157014865	0.571317	SOX9	ENST00000361409.2|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr18_-_34408802_34408807	0.547436	SOX9	ENST00000590842.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr9_+_103235365_103235419	0.527693	SOX9	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr11_-_79151695_79151710	0.514832	SOX9	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr2_+_46926326_46926452	0.509919	SOX9	ENST00000394861.2|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chrX_-_24690771_24690794	0.503191	SOX9	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr10_+_89622870_89622870	0.49751	SOX9	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr6_+_112408768_112408894	0.496542	SOX9	ENST00000368656.2|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B 	ENST00000604268.1|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B
hg19_v2_chr5_-_83680603_83680617	0.493293	SOX9	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr5_-_83680192_83680209	0.484456	SOX9	ENST00000380138.3|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr9_+_116263639_116263707	0.453226	SOX9	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr14_+_85996471_85996497	0.442269	SOX9	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr4_-_87028478_87028514	0.437206	SOX9	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr5_-_39425290_39425336	0.378312	SOX9	ENST00000545653.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr9_+_116263778_116263793	0.370071	SOX9	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr17_-_39728303_39728318	0.365009	SOX9	ENST00000588431.1|KRT9|ENSG00000171403.5|keratin 9 	ENST00000246662.4|KRT9|ENSG00000171403.5|keratin 9
hg19_v2_chr14_-_55878538_55878576	0.354105	SOX9	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr12_-_50294033_50294044	0.341308	SOX9	ENST00000552669.1|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr12_-_54673871_54673925	0.338338	SOX9	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr1_-_235491462_235491534	0.325394	SOX9	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr7_+_141463897_141463897	0.314002	SOX9	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr11_+_68080077_68080127	0.308276	SOX9	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr3_-_88108212_88108223	0.303447	SOX9	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr1_+_203096831_203096864	0.300725	SOX9	ENST00000337894.4|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr4_+_78079570_78079586	0.283187	SOX9	ENST00000509972.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr21_+_30671690_30671762	0.283159	SOX9	ENST00000399921.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr19_+_16222439_16222472	0.279244	SOX9	ENST00000300935.3|RAB8A|ENSG00000167461.7|RAB8A, member RAS oncogene family
hg19_v2_chr14_+_59655369_59655458	0.270516	SOX9	ENST00000360909.3|DAAM1|ENSG00000100592.11|dishevelled associated activator of morphogenesis 1 	ENST00000351081.1|DAAM1|ENSG00000100592.11|dishevelled associated activator of morphogenesis 1 	ENST00000556135.1|DAAM1|ENSG00000100592.11|dishevelled associated activator of morphogenesis 1
hg19_v2_chr16_-_25026641_25026698	0.247313	SOX9	ENST00000289968.6|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000303665.5|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000455311.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000441763.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr11_+_77532233_77532244	0.243135	SOX9	ENST00000525409.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing
hg19_v2_chr14_+_102276132_102276178	0.220003	SOX9	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_-_156399184_156399225	0.214855	SOX9	ENST00000368243.1|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000357975.4|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000310027.5|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000400991.2|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61
hg19_v2_chr3_+_89156674_89156797	0.201269	SOX9	ENST00000336596.2|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr12_-_122985067_122985268	0.168569	SOX9	ENST00000540586.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8 	ENST00000543897.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr16_+_66400533_66400545	0.146959	SOX9	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr11_-_67141090_67141208	0.131184	SOX9	ENST00000312438.7|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chrX_+_12993202_12993239	0.122206	SOX9	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr1_+_26737253_26737269	0.0987902	SOX9	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr7_-_75368248_75368265	0.089369	SOX9	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr3_-_88108192_88108203	0.0657429	SOX9	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr5_-_168006591_168006638	0.0528195	SOX9	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr6_+_43139037_43139094	0.0260534	SOX9	ENST00000265354.4|SRF|ENSG00000112658.6|serum response factor (c-fos serum response element-binding transcription factor)
hg19_v2_chr3_-_52486841_52486882	0.022894	SOX9	ENST00000496590.1|TNNC1|ENSG00000114854.3|troponin C type 1 (slow)
hg19_v2_chr5_-_179780312_179780387	0.00903195	SOX9	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
