hg19_v2_chr3_+_152017181_152017229	10.5984	UACAGUA	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr8_+_98656336_98656535	8.54994	UACAGUA	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr6_-_86352642_86352709	8.49855	UACAGUA	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr15_+_52311398_52311461	8.2682	UACAGUA	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr3_+_107241783_107241850	8.15473	UACAGUA	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr12_+_104324112_104324196	7.93042	UACAGUA	ENST00000299767.5|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chr2_+_201676256_201676323	7.28646	UACAGUA	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr16_-_47177874_47177922	6.90924	UACAGUA	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr14_-_64010046_64010107	6.41097	UACAGUA	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr5_+_177631497_177631508	6.37372	UACAGUA	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr2_+_198365122_198365137	6.36436	UACAGUA	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr8_+_22224811_22224822	6.35148	UACAGUA	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr15_-_37390482_37390572	6.27514	UACAGUA	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr18_-_51751132_51751158	6.05688	UACAGUA	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr8_-_103876965_103877012	6.03986	UACAGUA	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr5_+_151151471_151151496	5.88437	UACAGUA	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr1_+_165796753_165796776	5.81006	UACAGUA	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr2_-_37899323_37899374	5.77938	UACAGUA	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr3_+_150321068_150321123	5.72991	UACAGUA	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr2_+_85198216_85198305	5.60928	UACAGUA	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr13_-_50367057_50367142	5.49734	UACAGUA	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr12_+_104359576_104359601	5.47778	UACAGUA	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr15_-_101792137_101792159	5.3563	UACAGUA	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chr2_+_99953816_99953894	5.2794	UACAGUA	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr3_-_176914238_176914277	5.25365	UACAGUA	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr18_+_3451646_3451722	5.1304	UACAGUA	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr12_+_69004619_69004699	5.08536	UACAGUA	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr3_+_69812877_69812962	5.04877	UACAGUA	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr4_-_99851766_99851788	5.0232	UACAGUA	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chrX_-_109561294_109561467	4.94177	UACAGUA	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr4_+_140222609_140222742	4.91508	UACAGUA	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr2_+_198380289_198380305	4.88044	UACAGUA	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr2_+_178257372_178257523	4.84337	UACAGUA	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr21_-_27542972_27543138	4.76547	UACAGUA	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr15_+_57210818_57210930	4.73793	UACAGUA	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr6_-_24721054_24721074	4.68245	UACAGUA	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr1_+_116184566_116184633	4.57806	UACAGUA	ENST00000355485.2|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1 	ENST00000369510.4|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1
hg19_v2_chr12_-_76478686_76478813	4.55006	UACAGUA	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr5_+_86564739_86564791	4.5297	UACAGUA	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr1_-_225840747_225840860	4.52655	UACAGUA	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr10_+_93558069_93558154	4.51297	UACAGUA	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr8_+_26149007_26149061	4.51116	UACAGUA	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr3_+_105085734_105085760	4.39697	UACAGUA	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr4_+_99916765_99916776	4.24773	UACAGUA	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr11_+_9685604_9685706	4.24711	UACAGUA	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr15_+_77223960_77223994	4.24516	UACAGUA	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr10_-_98346801_98346812	4.21432	UACAGUA	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr1_-_235491462_235491534	4.19572	UACAGUA	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr12_-_31479045_31479074	4.19305	UACAGUA	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr6_+_160390102_160390147	4.18651	UACAGUA	ENST00000356956.1|IGF2R|ENSG00000197081.8|insulin-like growth factor 2 receptor
hg19_v2_chr12_+_72148614_72148699	4.14101	UACAGUA	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr12_-_15942309_15942330	4.11254	UACAGUA	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr6_-_16761678_16761721	4.08527	UACAGUA	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr5_+_74632993_74633028	4.08046	UACAGUA	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr6_-_53213780_53213947	4.05349	UACAGUA	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr10_+_95256356_95256408	4.00142	UACAGUA	ENST00000371485.3|CEP55|ENSG00000138180.11|centrosomal protein 55kDa
hg19_v2_chr15_+_39873268_39873294	3.98043	UACAGUA	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr5_+_141488070_141488094	3.97848	UACAGUA	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chrX_+_118708493_118708506	3.96903	UACAGUA	ENST00000371558.2|UBE2A|ENSG00000077721.11|ubiquitin-conjugating enzyme E2A
hg19_v2_chr3_+_23847394_23847423	3.94856	UACAGUA	ENST00000306627.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr1_-_225615599_225615802	3.93514	UACAGUA	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr7_+_116139424_116139444	3.90716	UACAGUA	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr1_+_93811438_93811548	3.88342	UACAGUA	ENST00000370272.4|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2) 	ENST00000370267.1|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2)
hg19_v2_chr1_-_245027833_245027855	3.83829	UACAGUA	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr20_-_57617831_57617964	3.74602	UACAGUA	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr8_-_101965146_101965236	3.7452	UACAGUA	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr7_+_116502527_116502558	3.70313	UACAGUA	ENST00000361183.3|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr17_+_42634844_42634925	3.69704	UACAGUA	ENST00000315323.3|FZD2|ENSG00000180340.5|frizzled family receptor 2
hg19_v2_chr3_+_130569429_130569479	3.58299	UACAGUA	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr20_-_48770174_48770243	3.5658	UACAGUA	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr5_+_115177178_115177178	3.56543	UACAGUA	ENST00000316788.7|AP3S1|ENSG00000177879.10|adaptor-related protein complex 3, sigma 1 subunit
hg19_v2_chr5_+_82767284_82767310	3.49047	UACAGUA	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr8_+_104311059_104311132	3.46218	UACAGUA	ENST00000358755.4|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000523739.1|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000540287.1|FZD6|ENSG00000164930.7|frizzled family receptor 6
hg19_v2_chr7_+_115850547_115850626	3.43927	UACAGUA	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr3_+_141106643_141106681	3.37573	UACAGUA	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr8_+_125486939_125487026	3.34705	UACAGUA	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr17_-_4269768_4269835	3.33739	UACAGUA	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr11_+_9406169_9406210	3.33305	UACAGUA	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr16_+_69221028_69221092	3.32074	UACAGUA	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr1_-_68299130_68299160	3.3011	UACAGUA	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr1_+_36621529_36621585	3.2996	UACAGUA	ENST00000316156.4|MAP7D1|ENSG00000116871.11|MAP7 domain containing 1
hg19_v2_chr1_+_228270361_228270437	3.29495	UACAGUA	ENST00000272102.5|ARF1|ENSG00000143761.9|ADP-ribosylation factor 1 	ENST00000540651.1|ARF1|ENSG00000143761.9|ADP-ribosylation factor 1
hg19_v2_chr20_-_48729670_48729694	3.29404	UACAGUA	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr12_-_57505121_57505216	3.28973	UACAGUA	ENST00000538913.2|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000537215.2|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000454075.3|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000554825.1|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000553275.1|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000300134.3|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced
hg19_v2_chr10_-_43903217_43903267	3.27563	UACAGUA	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr5_+_32585605_32585706	3.22583	UACAGUA	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr10_+_112327425_112327516	3.22487	UACAGUA	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr1_+_112162381_112162431	3.21655	UACAGUA	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr10_+_63661053_63661079	3.20367	UACAGUA	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr1_-_63988846_63988908	3.20249	UACAGUA	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chr12_+_4430371_4430429	3.17474	UACAGUA	ENST00000179259.4|C12orf5|ENSG00000078237.4|chromosome 12 open reading frame 5
hg19_v2_chr6_-_99797522_99797572	3.16706	UACAGUA	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr2_-_65357225_65357267	3.16651	UACAGUA	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr16_-_88851618_88851635	3.16533	UACAGUA	ENST00000301015.9|PIEZO1|ENSG00000103335.15|piezo-type mechanosensitive ion channel component 1
hg19_v2_chr11_+_32112431_32112454	3.07271	UACAGUA	ENST00000054950.3|RCN1|ENSG00000049449.4|reticulocalbin 1, EF-hand calcium binding domain
hg19_v2_chr10_-_79686284_79686527	3.06336	UACAGUA	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr1_+_110091189_110091268	3.04058	UACAGUA	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr5_-_127873659_127873735	2.99913	UACAGUA	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr2_+_28974668_28974729	2.99849	UACAGUA	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chrX_+_40944871_40944888	2.99242	UACAGUA	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr3_-_124774802_124774852	2.97784	UACAGUA	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr18_+_8717369_8717384	2.87585	UACAGUA	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr4_-_71705590_71705662	2.86692	UACAGUA	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr12_-_76425368_76425384	2.86212	UACAGUA	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr1_+_198126093_198126207	2.83742	UACAGUA	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr9_+_2621798_2621834	2.80277	UACAGUA	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr8_-_17104356_17104395	2.7923	UACAGUA	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr7_+_100797678_100797708	2.73553	UACAGUA	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr12_+_68042495_68042508	2.7206	UACAGUA	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr16_-_19533404_19533467	2.7092	UACAGUA	ENST00000353258.3|GDE1|ENSG00000006007.7|glycerophosphodiester phosphodiesterase 1
hg19_v2_chr13_+_26828275_26828312	2.69729	UACAGUA	ENST00000381527.3|CDK8|ENSG00000132964.7|cyclin-dependent kinase 8
hg19_v2_chr10_+_74033672_74033688	2.68743	UACAGUA	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr20_+_19867150_19867175	2.67759	UACAGUA	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr20_+_11871371_11871428	2.65418	UACAGUA	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr10_+_94352956_94353043	2.63618	UACAGUA	ENST00000260731.3|KIF11|ENSG00000138160.4|kinesin family member 11
hg19_v2_chr6_+_36646435_36646498	2.60745	UACAGUA	ENST00000244741.5|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000405375.1|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000373711.2|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v2_chr10_+_115674530_115674530	2.59647	UACAGUA	ENST00000451472.1|AL162407.1|ENSG00000234631.1|CDNA FLJ20147 fis, clone COL07954; HCG1781466; Uncharacterized protein
hg19_v2_chr22_-_43411106_43411165	2.59371	UACAGUA	ENST00000453643.1|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2 	ENST00000263246.3|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2 	ENST00000337959.4|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2
hg19_v2_chr13_-_107187462_107187462	2.59032	UACAGUA	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr5_-_148930960_148931013	2.58785	UACAGUA	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr18_-_18691739_18691812	2.54108	UACAGUA	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr12_+_27485823_27485868	2.5156	UACAGUA	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr15_-_83876758_83876770	2.5098	UACAGUA	ENST00000299633.4|HDGFRP3|ENSG00000166503.4|Hepatoma-derived growth factor-related protein 3
hg19_v2_chr6_+_161412759_161412846	2.49556	UACAGUA	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr1_+_27022485_27022543	2.47446	UACAGUA	ENST00000324856.7|ARID1A|ENSG00000117713.13|AT rich interactive domain 1A (SWI-like)
hg19_v2_chr17_-_60142609_60142657	2.43622	UACAGUA	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr4_-_102268628_102268693	2.42451	UACAGUA	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr5_+_138940742_138940769	2.37177	UACAGUA	ENST00000398733.3|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000253815.2|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000505007.1|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2
hg19_v2_chr4_-_74124502_74124523	2.34983	UACAGUA	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr20_+_39657454_39657470	2.32927	UACAGUA	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr6_-_53409890_53409927	2.28058	UACAGUA	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr3_-_52713729_52713784	2.26643	UACAGUA	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr6_-_82462425_82462491	2.26193	UACAGUA	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr2_+_178077477_178077525	2.26188	UACAGUA	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr3_-_98620500_98620547	2.25085	UACAGUA	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr10_+_31608054_31608156	2.22846	UACAGUA	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr12_+_111843749_111843763	2.22404	UACAGUA	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chrX_+_146993449_146993498	2.20623	UACAGUA	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr5_+_61602055_61602083	2.19811	UACAGUA	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr6_-_111804393_111804436	2.15626	UACAGUA	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr20_+_61427797_61427863	2.13973	UACAGUA	ENST00000370487.3|MRGBP|ENSG00000101189.5|MRG/MORF4L binding protein
hg19_v2_chrX_+_100663243_100663283	2.11378	UACAGUA	ENST00000316594.5|HNRNPH2|ENSG00000126945.8|heterogeneous nuclear ribonucleoprotein H2 (H')
hg19_v2_chr15_-_77363513_77363570	2.10751	UACAGUA	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr7_-_107204337_107204485	2.10512	UACAGUA	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr2_+_54683419_54683442	2.08552	UACAGUA	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr8_-_37756972_37757022	2.08327	UACAGUA	ENST00000330843.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000522727.1|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000287263.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I)
hg19_v2_chr9_-_14314066_14314075	2.05654	UACAGUA	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr5_+_154092396_154092462	2.05077	UACAGUA	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr17_+_30677136_30677205	2.03501	UACAGUA	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr12_-_54069856_54069899	2.02094	UACAGUA	ENST00000602871.1|ATP5G2|ENSG00000135390.13|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg19_v2_chr6_+_143929307_143929322	2.01108	UACAGUA	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr16_+_4674814_4674962	2.00969	UACAGUA	ENST00000415496.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000587747.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000399577.5|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000588994.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase 	ENST00000586183.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chrX_-_119694538_119694555	2.00607	UACAGUA	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr17_+_2496971_2497040	2.00412	UACAGUA	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr10_-_126849068_126849138	1.99157	UACAGUA	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr4_-_105416039_105416065	1.97705	UACAGUA	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr10_-_5855350_5855512	1.9752	UACAGUA	ENST00000456041.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380181.3|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000418688.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380132.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000609712.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380191.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2
hg19_v2_chr15_-_59665062_59665099	1.92374	UACAGUA	ENST00000288235.4|MYO1E|ENSG00000157483.4|myosin IE
hg19_v2_chr2_-_100106419_100106522	1.88996	UACAGUA	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr1_-_26232951_26232959	1.86416	UACAGUA	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr8_-_144897549_144897549	1.86408	UACAGUA	ENST00000356994.2|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein 	ENST00000320476.3|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein
hg19_v2_chr14_+_73525144_73525224	1.85189	UACAGUA	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr10_+_115614370_115614436	1.83568	UACAGUA	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr8_+_126442563_126442624	1.81631	UACAGUA	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr5_-_142783175_142783297	1.79782	UACAGUA	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr4_-_76598296_76598318	1.79298	UACAGUA	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr7_+_116312411_116312502	1.78006	UACAGUA	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr18_+_9475668_9475698	1.76987	UACAGUA	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chr17_+_28705921_28706000	1.7507	UACAGUA	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chrX_-_108976521_108976632	1.73995	UACAGUA	ENST00000469796.2|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000502391.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000508092.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000340800.2|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000348502.6|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr3_+_9439400_9439414	1.72118	UACAGUA	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr20_-_48770244_48770335	1.71123	UACAGUA	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr4_-_40631859_40631889	1.70159	UACAGUA	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr3_+_61547585_61547585	1.68036	UACAGUA	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr3_+_152879985_152880038	1.66851	UACAGUA	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr12_+_13349650_13349667	1.66225	UACAGUA	ENST00000256951.5|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000431267.2|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000542474.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000544053.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1
hg19_v2_chr2_+_46926048_46926095	1.64364	UACAGUA	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr1_+_43124087_43124183	1.63729	UACAGUA	ENST00000304979.3|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000372550.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000440068.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H)
hg19_v2_chr3_-_125094093_125094198	1.61866	UACAGUA	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr15_-_90645679_90645753	1.61824	UACAGUA	ENST00000539790.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000559482.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000330062.3|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial
hg19_v2_chr17_-_65241281_65241326	1.61646	UACAGUA	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr14_-_53162361_53162513	1.60913	UACAGUA	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr8_-_23712312_23712328	1.60706	UACAGUA	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr8_-_67525473_67525518	1.60416	UACAGUA	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr12_+_121124599_121124672	1.59588	UACAGUA	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr3_+_169684553_169684616	1.58881	UACAGUA	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr11_+_2398524_2398551	1.58528	UACAGUA	ENST00000263645.5|CD81|ENSG00000110651.7|CD81 molecule
hg19_v2_chr11_-_95657231_95657459	1.54971	UACAGUA	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chrX_-_16888448_16888537	1.54076	UACAGUA	ENST00000468092.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000404022.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000380087.2|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr5_+_112312416_112312440	1.5301	UACAGUA	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr2_+_160568978_160569064	1.52091	UACAGUA	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr2_+_182756615_182756698	1.50755	UACAGUA	ENST00000431877.2|SSFA2|ENSG00000138434.12|sperm specific antigen 2 	ENST00000320370.7|SSFA2|ENSG00000138434.12|sperm specific antigen 2
hg19_v2_chr5_-_38595498_38595514	1.48488	UACAGUA	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr5_+_52776228_52776245	1.44916	UACAGUA	ENST00000256759.3|FST|ENSG00000134363.7|follistatin
hg19_v2_chr1_+_147013182_147013329	1.44458	UACAGUA	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr2_-_166651191_166651213	1.42667	UACAGUA	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr4_-_66536057_66536071	1.42324	UACAGUA	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_+_171454659_171454723	1.40792	UACAGUA	ENST00000367742.3|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C 	ENST00000338920.4|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C
hg19_v2_chr6_+_35995488_35995528	1.39914	UACAGUA	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chr5_+_137688285_137688429	1.39586	UACAGUA	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr1_-_94374946_94374994	1.38995	UACAGUA	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr10_+_124913793_124913927	1.38	UACAGUA	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr1_+_244214577_244214593	1.37508	UACAGUA	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr4_-_1242764_1242942	1.37444	UACAGUA	ENST00000514210.1|CTBP1|ENSG00000159692.11|C-terminal binding protein 1 	ENST00000382952.3|CTBP1|ENSG00000159692.11|C-terminal binding protein 1 	ENST00000290921.6|CTBP1|ENSG00000159692.11|C-terminal binding protein 1
hg19_v2_chr9_-_95527079_95527148	1.34824	UACAGUA	ENST00000356884.6|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila) 	ENST00000375512.3|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila)
hg19_v2_chr1_-_186649543_186649563	1.33822	UACAGUA	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr7_-_148581251_148581347	1.3172	UACAGUA	ENST00000478654.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000460911.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000350995.2|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila)
hg19_v2_chr14_-_23504087_23504118	1.30732	UACAGUA	ENST00000493471.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5 	ENST00000460922.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr2_+_208394616_208394655	1.30664	UACAGUA	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr9_-_36400213_36400296	1.29838	UACAGUA	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr11_-_70507901_70507958	1.27625	UACAGUA	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr10_+_60094735_60094749	1.26564	UACAGUA	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr10_+_11206925_11206993	1.25472	UACAGUA	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr15_+_96873921_96873946	1.25243	UACAGUA	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr3_-_119813264_119813272	1.22806	UACAGUA	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr2_+_120517174_120517207	1.21763	UACAGUA	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr14_+_75230011_75230120	1.21212	UACAGUA	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr21_-_46238034_46238051	1.21173	UACAGUA	ENST00000332859.6|SUMO3|ENSG00000184900.11|small ubiquitin-like modifier 3
hg19_v2_chr8_-_105601134_105601252	1.21044	UACAGUA	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr9_-_86595503_86595569	1.20795	UACAGUA	ENST00000376281.4|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K 	ENST00000376264.2|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr9_+_128509624_128509658	1.18558	UACAGUA	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr6_+_4890226_4890276	1.17501	UACAGUA	ENST00000343762.5|CDYL|ENSG00000153046.13|chromodomain protein, Y-like
hg19_v2_chr15_-_75871589_75871676	1.16753	UACAGUA	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr1_-_25291475_25291511	1.16263	UACAGUA	ENST00000338888.3|RUNX3|ENSG00000020633.14|runt-related transcription factor 3 	ENST00000399916.1|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr12_-_90049828_90049847	1.16029	UACAGUA	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr12_-_15114603_15114631	1.15461	UACAGUA	ENST00000228945.4|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr4_+_183164574_183164586	1.14747	UACAGUA	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr10_+_88516396_88516426	1.12224	UACAGUA	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr2_-_172017343_172017391	1.10157	UACAGUA	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr19_+_11071546_11071624	1.09486	UACAGUA	ENST00000358026.2|SMARCA4|ENSG00000127616.13|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v2_chr5_-_111093406_111093458	1.09334	UACAGUA	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr18_-_61089665_61089733	1.09286	UACAGUA	ENST00000238497.5|VPS4B|ENSG00000119541.5|vacuolar protein sorting 4 homolog B (S. cerevisiae)
hg19_v2_chr7_-_47621736_47621747	1.09076	UACAGUA	ENST00000311160.9|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr16_-_46723066_46723121	1.08991	UACAGUA	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr7_+_69064300_69064342	1.0852	UACAGUA	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr6_-_132834184_132834337	1.08264	UACAGUA	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr22_-_28315115_28315260	1.07418	UACAGUA	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr3_+_120461484_120461600	1.06306	UACAGUA	ENST00000484715.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000469772.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000283875.5|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000492959.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa
hg19_v2_chr5_+_14143728_14143829	1.05947	UACAGUA	ENST00000344204.4|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor 	ENST00000537187.1|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor
hg19_v2_chr1_+_51701924_51702001	1.05496	UACAGUA	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr2_+_185463093_185463181	1.03052	UACAGUA	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chrX_+_100645812_100646008	1.0232	UACAGUA	ENST00000427805.2|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000553110.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000392994.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000409338.1|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough 	ENST00000409170.3|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough
hg19_v2_chr7_-_105752651_105752777	1.00197	UACAGUA	ENST00000470347.1|SYPL1|ENSG00000008282.3|synaptophysin-like 1 	ENST00000455385.2|SYPL1|ENSG00000008282.3|synaptophysin-like 1
hg19_v2_chr7_+_139044621_139044725	0.989753	UACAGUA	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr10_+_93683519_93683594	0.982156	UACAGUA	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr10_-_3827417_3827473	0.964296	UACAGUA	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr7_+_77469439_77469497	0.952913	UACAGUA	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chrX_-_124097620_124097666	0.924723	UACAGUA	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr8_+_133787586_133787673	0.91331	UACAGUA	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr2_+_228336849_228336904	0.893805	UACAGUA	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr1_+_25071848_25071944	0.85061	UACAGUA	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr16_-_10674528_10674555	0.84762	UACAGUA	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr3_+_15247686_15247784	0.847599	UACAGUA	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr15_-_68498376_68498417	0.847425	UACAGUA	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr2_-_235405679_235405739	0.846599	UACAGUA	ENST00000390645.2|ARL4C|ENSG00000188042.5|ADP-ribosylation factor-like 4C
hg19_v2_chr10_+_133753533_133753533	0.830543	UACAGUA	ENST00000422256.2|PPP2R2D|ENSG00000175470.14|protein phosphatase 2, regulatory subunit B, delta
hg19_v2_chr12_+_67663056_67663067	0.823548	UACAGUA	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr15_-_51914996_51915035	0.819024	UACAGUA	ENST00000251076.5|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr8_-_103425047_103425069	0.803561	UACAGUA	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr2_-_114036488_114036527	0.796702	UACAGUA	ENST00000263335.7|PAX8|ENSG00000125618.12|paired box 8 	ENST00000397647.3|PAX8|ENSG00000125618.12|paired box 8 	ENST00000348715.5|PAX8|ENSG00000125618.12|paired box 8 	ENST00000429538.3|PAX8|ENSG00000125618.12|paired box 8
hg19_v2_chr1_+_82266053_82266082	0.763056	UACAGUA	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chrX_-_128657457_128657477	0.755714	UACAGUA	ENST00000371121.3|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371123.1|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371122.4|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v2_chr7_-_32931387_32931509	0.75516	UACAGUA	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr20_+_51588873_51588953	0.752322	UACAGUA	ENST00000371497.5|TSHZ2|ENSG00000182463.11|teashirt zinc finger homeobox 2
hg19_v2_chr3_+_110790590_110790603	0.749634	UACAGUA	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr3_+_113465866_113465925	0.746492	UACAGUA	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr1_+_100435315_100435345	0.744806	UACAGUA	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr3_+_150126101_150126122	0.735706	UACAGUA	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr15_+_59279851_59279880	0.730365	UACAGUA	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr15_+_89631381_89631391	0.721905	UACAGUA	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr4_-_7873981_7874044	0.702531	UACAGUA	ENST00000360265.4|AFAP1|ENSG00000196526.6|actin filament associated protein 1
hg19_v2_chr6_+_71377473_71377520	0.70182	UACAGUA	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr3_-_99833333_99833357	0.69959	UACAGUA	ENST00000354552.3|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000331335.5|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000398326.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr1_-_93645818_93645918	0.684227	UACAGUA	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr2_-_160472952_160473080	0.679556	UACAGUA	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr6_+_158733692_158733692	0.672688	UACAGUA	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr9_-_123964114_123964210	0.670606	UACAGUA	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr5_+_85913721_85913790	0.668823	UACAGUA	ENST00000247655.3|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000509578.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000515763.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc
hg19_v2_chr6_+_71998506_71998522	0.667078	UACAGUA	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr4_-_68566832_68566897	0.654128	UACAGUA	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr1_-_78444776_78444800	0.641044	UACAGUA	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr9_+_91003271_91003386	0.627644	UACAGUA	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr16_+_66400533_66400545	0.614654	UACAGUA	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr2_-_216300784_216300895	0.611777	UACAGUA	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr14_+_67707826_67707994	0.608044	UACAGUA	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr3_-_88108192_88108203	0.601059	UACAGUA	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr13_+_33160553_33160564	0.592329	UACAGUA	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr5_-_78809950_78810040	0.590563	UACAGUA	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr3_+_37284668_37284771	0.59045	UACAGUA	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr1_+_200708671_200708744	0.586345	UACAGUA	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr2_+_71558858_71558936	0.574369	UACAGUA	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr11_+_129939779_129939801	0.570472	UACAGUA	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chrX_-_131352152_131352204	0.564169	UACAGUA	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr1_+_193028552_193028589	0.560843	UACAGUA	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr17_-_80231557_80231607	0.549422	UACAGUA	ENST00000392334.2|CSNK1D|ENSG00000141551.10|casein kinase 1, delta 	ENST00000314028.6|CSNK1D|ENSG00000141551.10|casein kinase 1, delta
hg19_v2_chr10_-_118032697_118032796	0.541983	UACAGUA	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr12_-_57824739_57824834	0.538059	UACAGUA	ENST00000347140.3|R3HDM2|ENSG00000179912.15|R3H domain containing 2 	ENST00000402412.1|R3HDM2|ENSG00000179912.15|R3H domain containing 2
hg19_v2_chr4_-_54930790_54930857	0.537818	UACAGUA	ENST00000263921.3|CHIC2|ENSG00000109220.6|cysteine-rich hydrophobic domain 2
hg19_v2_chr21_-_28338732_28338832	0.516843	UACAGUA	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr5_-_114961858_114961876	0.505343	UACAGUA	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr7_+_18535346_18535399	0.503096	UACAGUA	ENST00000405010.3|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000406451.4|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000428307.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr4_+_4861385_4861398	0.494368	UACAGUA	ENST00000382723.4|MSX1|ENSG00000163132.6|msh homeobox 1
hg19_v2_chr4_+_37892682_37892757	0.469221	UACAGUA	ENST00000508802.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000261439.4|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000402522.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v2_chr2_-_40679186_40679297	0.466483	UACAGUA	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr3_+_11314099_11314122	0.46587	UACAGUA	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr2_-_24149977_24150007	0.461752	UACAGUA	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr6_-_134639180_134639220	0.460164	UACAGUA	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr7_-_44887620_44887710	0.438183	UACAGUA	ENST00000349299.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000521529.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000308153.4|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000350771.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000222690.6|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000381124.5|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000437072.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000446531.1|H2AFV|ENSG00000105968.14|H2A histone family, member V
hg19_v2_chr9_-_107690420_107690518	0.42389	UACAGUA	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr6_+_163835669_163835693	0.410877	UACAGUA	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_+_77656339_77656362	0.408588	UACAGUA	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr2_-_183903133_183903210	0.408118	UACAGUA	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr3_+_19988566_19988648	0.406759	UACAGUA	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr17_-_77813186_77813249	0.401974	UACAGUA	ENST00000448310.1|CBX4|ENSG00000141582.10|chromobox homolog 4 	ENST00000269397.4|CBX4|ENSG00000141582.10|chromobox homolog 4
hg19_v2_chr4_+_123747834_123747863	0.38797	UACAGUA	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr8_-_13372395_13372429	0.385202	UACAGUA	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr6_-_52926539_52926668	0.379235	UACAGUA	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr2_-_69098566_69098649	0.376342	UACAGUA	ENST00000295379.1|BMP10|ENSG00000163217.1|bone morphogenetic protein 10
hg19_v2_chr1_+_36396677_36396749	0.361527	UACAGUA	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr10_-_94333784_94333860	0.360119	UACAGUA	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr4_+_126237554_126237554	0.34446	UACAGUA	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr3_+_23986748_23986761	0.334483	UACAGUA	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr5_+_142149955_142150000	0.329073	UACAGUA	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr3_-_138553594_138553684	0.324674	UACAGUA	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr13_-_39612176_39612258	0.313532	UACAGUA	ENST00000352251.3|PROSER1|ENSG00000120685.15|proline and serine rich 1 	ENST00000350125.3|PROSER1|ENSG00000120685.15|proline and serine rich 1
hg19_v2_chr3_-_121468602_121468617	0.309051	UACAGUA	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr11_+_35684288_35684353	0.287369	UACAGUA	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr12_-_31744031_31744059	0.259275	UACAGUA	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr12_+_14518598_14518663	0.251523	UACAGUA	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr10_+_112257596_112257634	0.248464	UACAGUA	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chr15_+_49715293_49715448	0.241509	UACAGUA	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr4_+_144434584_144434709	0.233146	UACAGUA	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr2_-_122042770_122042785	0.231585	UACAGUA	ENST00000263707.5|TFCP2L1|ENSG00000115112.7|transcription factor CP2-like 1
hg19_v2_chr4_-_23891693_23891706	0.227314	UACAGUA	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr7_-_92463210_92463231	0.227196	UACAGUA	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr16_+_8891670_8891734	0.224095	UACAGUA	ENST00000268261.4|PMM2|ENSG00000140650.7|phosphomannomutase 2 	ENST00000539622.1|PMM2|ENSG00000140650.7|phosphomannomutase 2 	ENST00000569958.1|PMM2|ENSG00000140650.7|phosphomannomutase 2 	ENST00000537352.1|PMM2|ENSG00000140650.7|phosphomannomutase 2
hg19_v2_chr4_+_177241094_177241173	0.221274	UACAGUA	ENST00000503362.1|SPCS3|ENSG00000129128.8|signal peptidase complex subunit 3 homolog (S. cerevisiae)
hg19_v2_chr15_-_30114622_30114706	0.221179	UACAGUA	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr5_-_114880533_114880591	0.21253	UACAGUA	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chrX_-_77041685_77041716	0.209916	UACAGUA	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr6_-_56707943_56708013	0.209892	UACAGUA	ENST00000370769.4|DST|ENSG00000151914.13|dystonin 	ENST00000421834.2|DST|ENSG00000151914.13|dystonin 	ENST00000312431.6|DST|ENSG00000151914.13|dystonin 	ENST00000361203.3|DST|ENSG00000151914.13|dystonin 	ENST00000523817.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr7_-_129592700_129592828	0.20906	UACAGUA	ENST00000472396.1|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H 	ENST00000355621.3|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H
hg19_v2_chr11_-_88796803_88796827	0.203981	UACAGUA	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr6_+_34857019_34857117	0.18733	UACAGUA	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr10_+_8096631_8096660	0.184466	UACAGUA	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr4_+_26585538_26585680	0.177047	UACAGUA	ENST00000264866.4|TBC1D19|ENSG00000109680.6|TBC1 domain family, member 19
hg19_v2_chr3_-_15901278_15901354	0.176058	UACAGUA	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr15_+_68570062_68570147	0.153503	UACAGUA	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr9_-_95244781_95244796	0.147668	UACAGUA	ENST00000375544.3|ASPN|ENSG00000106819.7|asporin 	ENST00000375543.1|ASPN|ENSG00000106819.7|asporin 	ENST00000395538.3|ASPN|ENSG00000106819.7|asporin 	ENST00000450139.2|ASPN|ENSG00000106819.7|asporin
hg19_v2_chr4_-_73434498_73434516	0.144771	UACAGUA	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr21_+_22370608_22370638	0.142512	UACAGUA	ENST00000400546.1|NCAM2|ENSG00000154654.10|neural cell adhesion molecule 2
hg19_v2_chr1_+_229406847_229406935	0.138842	UACAGUA	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr4_-_114900831_114900857	0.138447	UACAGUA	ENST00000315366.7|ARSJ|ENSG00000180801.11|arylsulfatase family, member J
hg19_v2_chr9_+_2015335_2015374	0.135107	UACAGUA	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr2_-_225450013_225450068	0.120251	UACAGUA	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr1_-_24306798_24306828	0.119885	UACAGUA	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr1_-_150552006_150552093	0.114014	UACAGUA	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr4_-_129208940_129208976	0.107973	UACAGUA	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr15_-_65809581_65809617	0.10251	UACAGUA	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr8_-_74884511_74884546	0.0904103	UACAGUA	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr20_+_57226284_57226345	0.0854854	UACAGUA	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr16_+_86544113_86544145	0.084023	UACAGUA	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chr2_+_191273052_191273121	0.0826984	UACAGUA	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr1_-_220445757_220445819	0.0790346	UACAGUA	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr2_-_208030647_208030689	0.0786529	UACAGUA	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr1_+_12123414_12123445	0.0757114	UACAGUA	ENST00000263932.2|TNFRSF8|ENSG00000120949.10|tumor necrosis factor receptor superfamily, member 8
hg19_v2_chr3_+_88188254_88188254	0.0755877	UACAGUA	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr7_+_138145076_138145116	0.0691372	UACAGUA	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr18_+_18943554_18943587	0.0612619	UACAGUA	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr21_+_30671189_30671207	0.0602777	UACAGUA	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr2_-_214014959_214015058	0.0573252	UACAGUA	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr16_-_73082274_73082274	0.0518915	UACAGUA	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr1_+_203764742_203764834	0.0446334	UACAGUA	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr7_-_120498357_120498456	0.0432662	UACAGUA	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr6_+_64345698_64345750	0.0416045	UACAGUA	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr1_-_217804377_217804446	0.0127123	UACAGUA	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr8_-_74791051_74791145	0.0125918	UACAGUA	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr4_+_87515454_87515486	0.0122065	UACAGUA	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr20_-_14318248_14318264	0.00938846	UACAGUA	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr14_-_99947168_99947232	2.45141e-06	UACAGUA	ENST00000331768.5|SETD3|ENSG00000183576.8|SET domain containing 3
