hg19_v2_chr4_-_174256276_174256303	12.2649	UCACAUU	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr12_+_104682496_104682651	12.1583	UCACAUU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr17_-_62658186_62658231	9.45331	UCACAUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr5_+_82767284_82767310	9.03629	UCACAUU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr17_+_37026106_37026123	7.76503	UCACAUU	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr12_-_76953284_76953341	7.76198	UCACAUU	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr5_+_162864575_162864620	7.61182	UCACAUU	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr12_-_46662772_46662835	7.23165	UCACAUU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr17_-_29151794_29151803	7.21084	UCACAUU	ENST00000324238.6|CRLF3|ENSG00000176390.10|cytokine receptor-like factor 3
hg19_v2_chr5_+_65222299_65222361	6.6069	UCACAUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr20_+_39657454_39657470	6.40412	UCACAUU	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr12_+_104324112_104324196	6.09524	UCACAUU	ENST00000299767.5|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chr14_-_64010046_64010107	6.08161	UCACAUU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr1_+_26798955_26799010	5.95323	UCACAUU	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr3_-_182698381_182698431	5.89087	UCACAUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr8_+_126442563_126442624	5.77418	UCACAUU	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr3_-_113465065_113465147	5.59336	UCACAUU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr6_-_24721054_24721074	5.55868	UCACAUU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr13_+_98605902_98605968	5.47622	UCACAUU	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr6_+_119215308_119215391	5.44062	UCACAUU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr10_+_89622870_89622870	5.29716	UCACAUU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr11_-_76091986_76092038	5.08451	UCACAUU	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr16_+_67596310_67596353	5.04496	UCACAUU	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr1_+_112162381_112162431	4.99502	UCACAUU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr1_-_225615599_225615802	4.90576	UCACAUU	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chrX_-_129244655_129244697	4.8461	UCACAUU	ENST00000335997.7|ELF4|ENSG00000102034.12|E74-like factor 4 (ets domain transcription factor)
hg19_v2_chr3_-_52713729_52713784	4.72622	UCACAUU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr17_+_45608430_45608490	4.67115	UCACAUU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr8_-_103876965_103877012	4.60507	UCACAUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr6_+_114178512_114178586	4.57563	UCACAUU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr11_+_32112431_32112454	4.4719	UCACAUU	ENST00000054950.3|RCN1|ENSG00000049449.4|reticulocalbin 1, EF-hand calcium binding domain
hg19_v2_chr5_-_157002775_157002790	4.44928	UCACAUU	ENST00000257527.4|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr12_+_70636765_70636817	4.06758	UCACAUU	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr2_-_175113301_175113426	3.96231	UCACAUU	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr2_-_200322723_200322819	3.90214	UCACAUU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr14_+_103058948_103059005	3.88896	UCACAUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr3_+_196466710_196466824	3.87829	UCACAUU	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr4_+_39699664_39699772	3.86749	UCACAUU	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr10_+_1095416_1095482	3.85728	UCACAUU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr4_-_185395672_185395734	3.7238	UCACAUU	ENST00000393593.3|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr4_-_40631859_40631889	3.70811	UCACAUU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chrX_+_21958674_21958721	3.63019	UCACAUU	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr11_+_34073195_34073266	3.62358	UCACAUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr10_+_93558069_93558154	3.62245	UCACAUU	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr12_-_10766184_10766222	3.58022	UCACAUU	ENST00000539554.1|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000381881.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000320756.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila)
hg19_v2_chr1_-_212004090_212004168	3.56378	UCACAUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr10_+_81107216_81107237	3.50115	UCACAUU	ENST00000394579.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F 	ENST00000225174.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F
hg19_v2_chr1_+_24286287_24286326	3.40783	UCACAUU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr19_+_1026298_1026336	3.36107	UCACAUU	ENST00000263097.4|CNN2|ENSG00000064666.10|calponin 2
hg19_v2_chr14_-_68141535_68141574	3.35733	UCACAUU	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr5_+_112312416_112312440	3.34706	UCACAUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr11_+_74660278_74660334	3.3379	UCACAUU	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr14_+_73525144_73525224	3.33761	UCACAUU	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr15_-_37390482_37390572	3.31659	UCACAUU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr10_-_120840309_120840338	3.31639	UCACAUU	ENST00000369144.3|EIF3A|ENSG00000107581.8|eukaryotic translation initiation factor 3, subunit A
hg19_v2_chr9_-_74383799_74383818	3.29026	UCACAUU	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr10_+_11206925_11206993	3.27199	UCACAUU	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr1_-_205719295_205719404	3.15814	UCACAUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr1_+_198126093_198126207	3.10161	UCACAUU	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr3_-_160283348_160283376	3.07898	UCACAUU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr7_+_27779714_27779819	3.07105	UCACAUU	ENST00000265393.6|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000409980.1|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000433216.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000396319.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v2_chr9_+_110045537_110045572	3.0505	UCACAUU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr9_-_127952032_127952098	3.05014	UCACAUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr6_-_16761678_16761721	2.98178	UCACAUU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr20_+_31407692_31407709	2.97909	UCACAUU	ENST00000375571.5|MAPRE1|ENSG00000101367.8|microtubule-associated protein, RP/EB family, member 1
hg19_v2_chr10_-_101989315_101989376	2.93931	UCACAUU	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr12_+_69004619_69004699	2.92102	UCACAUU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr17_-_40761375_40761409	2.86641	UCACAUU	ENST00000543197.1|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C 	ENST00000309428.5|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C
hg19_v2_chr4_+_140222609_140222742	2.78914	UCACAUU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr2_-_10952922_10952970	2.74373	UCACAUU	ENST00000272227.3|PDIA6|ENSG00000143870.8|protein disulfide isomerase family A, member 6
hg19_v2_chr6_+_15246501_15246527	2.73333	UCACAUU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr4_-_141677267_141677291	2.72534	UCACAUU	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr3_+_30648066_30648167	2.70225	UCACAUU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr13_+_73302047_73302073	2.6914	UCACAUU	ENST00000377814.2|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000377815.3|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000390667.5|BORA|ENSG00000136122.11|bora, aurora kinase A activator
hg19_v2_chr4_+_17616253_17616275	2.67477	UCACAUU	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr1_-_150669500_150669602	2.66782	UCACAUU	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr12_+_122242597_122242638	2.6578	UCACAUU	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr6_+_138188551_138188719	2.64242	UCACAUU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr5_+_34656331_34656351	2.607	UCACAUU	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr6_-_82462425_82462491	2.59627	UCACAUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr8_+_20054878_20054950	2.57586	UCACAUU	ENST00000276390.2|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 	ENST00000519667.1|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
hg19_v2_chr12_+_66217911_66218018	2.50583	UCACAUU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr1_-_245027833_245027855	2.50259	UCACAUU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr1_-_114355083_114355123	2.49648	UCACAUU	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr1_-_68962782_68962801	2.48726	UCACAUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr8_-_28243934_28243993	2.46099	UCACAUU	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr10_-_65225722_65225755	2.44265	UCACAUU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr2_+_159313452_159313624	2.43242	UCACAUU	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chrX_+_146993449_146993498	2.42465	UCACAUU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr4_-_76598296_76598318	2.39821	UCACAUU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_+_244214577_244214593	2.39181	UCACAUU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr9_+_114423615_114423661	2.35097	UCACAUU	ENST00000374293.4|GNG10|ENSG00000242616.3|guanine nucleotide binding protein (G protein), gamma 10
hg19_v2_chr4_-_140098339_140098392	2.33382	UCACAUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr9_+_36572851_36572932	2.2622	UCACAUU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr7_-_93520259_93520316	2.2365	UCACAUU	ENST00000222543.5|TFPI2|ENSG00000105825.7|tissue factor pathway inhibitor 2
hg19_v2_chr8_+_26240414_26240631	2.2291	UCACAUU	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr2_+_28974668_28974729	2.21839	UCACAUU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr2_-_160472952_160473080	2.20337	UCACAUU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr4_-_102268628_102268693	2.19909	UCACAUU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr7_-_26240357_26240377	2.19104	UCACAUU	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr2_-_172017343_172017391	2.19067	UCACAUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr3_+_152879985_152880038	2.18417	UCACAUU	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr1_-_38325256_38325292	2.17512	UCACAUU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr7_+_114562172_114562243	2.16497	UCACAUU	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr5_-_131826457_131826514	2.14266	UCACAUU	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr8_+_59465728_59465826	2.12881	UCACAUU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr14_+_60715928_60716007	2.09538	UCACAUU	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr7_-_123197733_123197890	2.08998	UCACAUU	ENST00000470123.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 	ENST00000471770.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr13_-_50367057_50367142	2.08981	UCACAUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr7_+_99036543_99036696	2.08859	UCACAUU	ENST00000436336.2|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa 	ENST00000451876.1|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa 	ENST00000292476.5|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa
hg19_v2_chr1_-_108742957_108743003	2.06404	UCACAUU	ENST00000565488.1|SLC25A24|ENSG00000085491.11|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v2_chr5_-_176778523_176778684	2.03761	UCACAUU	ENST00000513877.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000515209.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000514458.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000502560.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2
hg19_v2_chr3_+_69812877_69812962	2.02712	UCACAUU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr8_-_8751068_8751158	1.9914	UCACAUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr18_+_3451646_3451722	1.99093	UCACAUU	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr1_-_205290865_205290891	1.9897	UCACAUU	ENST00000367157.3|NUAK2|ENSG00000163545.7|NUAK family, SNF1-like kinase, 2
hg19_v2_chr4_+_154387480_154387536	1.97218	UCACAUU	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr2_-_47168906_47168994	1.92615	UCACAUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr7_-_93633684_93633695	1.91456	UCACAUU	ENST00000222547.3|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein 	ENST00000425626.1|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein
hg19_v2_chr18_+_9913977_9914088	1.89842	UCACAUU	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr1_-_65432171_65432252	1.88767	UCACAUU	ENST00000342505.4|JAK1|ENSG00000162434.7|Janus kinase 1
hg19_v2_chr10_+_85899196_85899273	1.86989	UCACAUU	ENST00000372134.3|GHITM|ENSG00000165678.15|growth hormone inducible transmembrane protein
hg19_v2_chr3_-_72496035_72496069	1.86171	UCACAUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr3_-_18466787_18466861	1.83723	UCACAUU	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr4_+_160188889_160188968	1.83231	UCACAUU	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr4_-_24586140_24586188	1.81953	UCACAUU	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chr4_-_103748880_103749047	1.81212	UCACAUU	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr4_+_41937131_41937211	1.79473	UCACAUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr14_+_55518349_55518423	1.72272	UCACAUU	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr22_-_18111499_18111584	1.71765	UCACAUU	ENST00000413576.1|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399796.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399798.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000253413.5|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
hg19_v2_chr20_-_36156125_36156250	1.71302	UCACAUU	ENST00000397135.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein 	ENST00000397137.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr10_+_93683519_93683594	1.70107	UCACAUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr17_-_40428359_40428462	1.65885	UCACAUU	ENST00000293328.3|STAT5B|ENSG00000173757.5|signal transducer and activator of transcription 5B
hg19_v2_chr17_+_57784826_57784883	1.6425	UCACAUU	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr3_-_133380731_133380834	1.63575	UCACAUU	ENST00000260810.5|TOPBP1|ENSG00000163781.8|topoisomerase (DNA) II binding protein 1
hg19_v2_chr20_+_62371206_62371224	1.62849	UCACAUU	ENST00000266077.2|SLC2A4RG|ENSG00000125520.9|SLC2A4 regulator
hg19_v2_chrX_-_20284958_20285039	1.62262	UCACAUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr10_-_99094458_99094500	1.58697	UCACAUU	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr1_-_86174065_86174134	1.56313	UCACAUU	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr10_+_115438920_115438963	1.56214	UCACAUU	ENST00000429617.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000369331.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr6_+_110501344_110501412	1.56068	UCACAUU	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr8_-_103668114_103668134	1.5545	UCACAUU	ENST00000285407.6|KLF10|ENSG00000155090.10|Kruppel-like factor 10
hg19_v2_chr15_-_60690163_60690242	1.54234	UCACAUU	ENST00000558998.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560165.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559780.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559467.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559956.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000332680.4|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000396024.3|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000421017.2|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560466.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558132.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559113.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557906.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558558.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560468.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559370.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558169.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559725.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558985.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000451270.2|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr14_+_39735411_39735502	1.54174	UCACAUU	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr5_+_40679584_40679600	1.50372	UCACAUU	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr15_+_40532058_40532072	1.50142	UCACAUU	ENST00000260404.4|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr17_-_3749515_3749551	1.48685	UCACAUU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr3_+_107241783_107241850	1.47196	UCACAUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr13_-_30169807_30169839	1.46897	UCACAUU	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr2_-_209119831_209119857	1.46754	UCACAUU	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr1_+_36621529_36621585	1.46405	UCACAUU	ENST00000316156.4|MAP7D1|ENSG00000116871.11|MAP7 domain containing 1
hg19_v2_chr2_-_153574480_153574552	1.46089	UCACAUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chrX_+_46433193_46433237	1.45721	UCACAUU	ENST00000276055.3|CHST7|ENSG00000147119.3|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
hg19_v2_chr15_+_41709302_41709348	1.4423	UCACAUU	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr8_-_117886955_117887105	1.44171	UCACAUU	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr7_+_116312411_116312502	1.43052	UCACAUU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr1_+_93913713_93913839	1.41248	UCACAUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr22_+_38093005_38093067	1.38036	UCACAUU	ENST00000406386.3|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr6_+_4021554_4021656	1.36956	UCACAUU	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr12_+_22778009_22778112	1.36292	UCACAUU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr4_-_140223670_140223705	1.35926	UCACAUU	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr8_+_86376081_86376142	1.34456	UCACAUU	ENST00000285379.5|CA2|ENSG00000104267.5|carbonic anhydrase II
hg19_v2_chr17_+_34900737_34900821	1.34116	UCACAUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr10_+_60094735_60094749	1.31293	UCACAUU	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr1_-_39339777_39339777	1.268	UCACAUU	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr13_+_43597269_43597339	1.25473	UCACAUU	ENST00000379221.2|DNAJC15|ENSG00000120675.4|DnaJ (Hsp40) homolog, subfamily C, member 15
hg19_v2_chr2_+_163200598_163200667	1.2349	UCACAUU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr10_+_99079008_99079060	1.22487	UCACAUU	ENST00000371021.3|FRAT1|ENSG00000165879.7|frequently rearranged in advanced T-cell lymphomas
hg19_v2_chr15_-_52861394_52861436	1.22201	UCACAUU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr2_-_1748214_1748295	1.20832	UCACAUU	ENST00000433670.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000425171.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000252804.4|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila)
hg19_v2_chr12_+_96588143_96588185	1.18991	UCACAUU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr8_+_61591337_61591393	1.1813	UCACAUU	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr6_+_89790490_89790506	1.17666	UCACAUU	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr11_+_124609823_124609941	1.16661	UCACAUU	ENST00000412681.2|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr2_+_120517174_120517207	1.14826	UCACAUU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr16_-_48644061_48644141	1.13167	UCACAUU	ENST00000262384.3|N4BP1|ENSG00000102921.3|NEDD4 binding protein 1
hg19_v2_chr8_+_37620097_37620146	1.1294	UCACAUU	ENST00000328195.3|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523358.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523187.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial)
hg19_v2_chr12_-_9102549_9102591	1.1172	UCACAUU	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr8_-_122653630_122653661	1.11682	UCACAUU	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr10_-_125851961_125851970	1.10751	UCACAUU	ENST00000346248.5|CHST15|ENSG00000182022.13|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
hg19_v2_chr7_+_69064300_69064342	1.10607	UCACAUU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr1_-_231560790_231560790	1.10425	UCACAUU	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr7_+_5938351_5938379	1.10326	UCACAUU	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr17_-_65241281_65241326	1.09976	UCACAUU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chrX_-_132549506_132549526	1.06038	UCACAUU	ENST00000370828.3|GPC4|ENSG00000076716.7|glypican 4
hg19_v2_chr8_+_64081118_64081131	1.05962	UCACAUU	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr5_+_10353780_10353890	1.05504	UCACAUU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr17_+_28705921_28706000	1.05033	UCACAUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr17_-_62502639_62502849	1.04427	UCACAUU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr11_+_86748863_86748948	1.04193	UCACAUU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr12_+_111843749_111843763	1.04038	UCACAUU	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr8_+_95653373_95653415	1.034	UCACAUU	ENST00000358397.5|ESRP1|ENSG00000104413.11|epithelial splicing regulatory protein 1
hg19_v2_chr10_+_43633914_43633935	1.02942	UCACAUU	ENST00000374466.3|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2 	ENST00000374464.1|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2
hg19_v2_chrX_-_109561294_109561467	1.02528	UCACAUU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr16_-_89007491_89007608	1.02245	UCACAUU	ENST00000327483.5|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000564416.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr4_-_74124502_74124523	1.01053	UCACAUU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr6_+_143929307_143929322	1.00974	UCACAUU	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr16_-_46723066_46723121	1.00954	UCACAUU	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr4_+_129730779_129730826	0.981544	UCACAUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr18_+_60190226_60190314	0.981199	UCACAUU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr4_-_68566832_68566897	0.97664	UCACAUU	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr13_-_31736027_31736064	0.962933	UCACAUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr6_-_134639180_134639220	0.950813	UCACAUU	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr7_+_117824086_117824202	0.941915	UCACAUU	ENST00000249299.2|NAA38|ENSG00000128534.3|N(alpha)-acetyltransferase 38, NatC auxiliary subunit 	ENST00000424702.1|NAA38|ENSG00000128534.3|N(alpha)-acetyltransferase 38, NatC auxiliary subunit
hg19_v2_chr11_-_85780086_85780161	0.930143	UCACAUU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr4_+_41992489_41992561	0.923037	UCACAUU	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr3_+_5163905_5164039	0.915652	UCACAUU	ENST00000256496.3|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B 	ENST00000419534.2|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B
hg19_v2_chr9_-_36400213_36400296	0.912668	UCACAUU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr12_-_118797475_118797527	0.910226	UCACAUU	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr1_-_51984908_51984952	0.907309	UCACAUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr1_+_218458625_218458660	0.906805	UCACAUU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr6_+_71998506_71998522	0.904148	UCACAUU	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr20_-_524455_524466	0.903301	UCACAUU	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr17_+_38375574_38375615	0.898092	UCACAUU	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr5_+_52083730_52083821	0.893854	UCACAUU	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr18_+_3261883_3261907	0.891388	UCACAUU	ENST00000237500.5|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory
hg19_v2_chr5_-_64064508_64064529	0.887104	UCACAUU	ENST00000513458.4|SREK1IP1|ENSG00000153006.10|SREK1-interacting protein 1
hg19_v2_chr22_+_40573921_40573946	0.877641	UCACAUU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr3_+_38206975_38207101	0.859154	UCACAUU	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr20_+_47662805_47662907	0.85339	UCACAUU	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr5_+_179159813_179159851	0.851979	UCACAUU	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr12_+_862089_862343	0.847333	UCACAUU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr10_+_73724123_73724206	0.845013	UCACAUU	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr1_+_82266053_82266082	0.841483	UCACAUU	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr11_+_75526212_75526301	0.83324	UCACAUU	ENST00000356136.3|UVRAG|ENSG00000198382.4|UV radiation resistance associated
hg19_v2_chr3_-_47823298_47823423	0.831863	UCACAUU	ENST00000254480.5|SMARCC1|ENSG00000173473.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v2_chr21_-_15755446_15755508	0.828595	UCACAUU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr5_+_126112794_126112928	0.824829	UCACAUU	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr16_-_18812746_18813000	0.821478	UCACAUU	ENST00000546206.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000567078.2|RP11-1035H13.3|ENSG00000260342.2|Uncharacterized protein  	ENST00000562819.1|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000562234.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000304414.7|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1
hg19_v2_chr5_-_77844974_77844994	0.811309	UCACAUU	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr3_+_187930719_187930729	0.804104	UCACAUU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr7_+_100797678_100797708	0.768202	UCACAUU	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr4_+_184020398_184020463	0.766423	UCACAUU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr9_+_108456800_108456849	0.764474	UCACAUU	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr1_-_225840747_225840860	0.763005	UCACAUU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr5_-_141392538_141392606	0.760759	UCACAUU	ENST00000503794.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000510194.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504424.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000513454.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000458112.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000542860.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000503229.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000500692.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000311337.6|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504139.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000505689.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1
hg19_v2_chr5_-_127873659_127873735	0.759632	UCACAUU	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr12_-_7655329_7655334	0.757757	UCACAUU	ENST00000541972.1|CD163|ENSG00000177575.8|CD163 molecule
hg19_v2_chr4_-_111119804_111119832	0.754922	UCACAUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_+_155588300_155588369	0.751384	UCACAUU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr3_-_98312548_98312567	0.749614	UCACAUU	ENST00000264193.2|CPOX|ENSG00000080819.2|coproporphyrinogen oxidase
hg19_v2_chr10_+_121652204_121652286	0.7434	UCACAUU	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chr1_+_66797687_66797884	0.733001	UCACAUU	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr1_-_89531041_89531050	0.727736	UCACAUU	ENST00000370473.4|GBP1|ENSG00000117228.9|guanylate binding protein 1, interferon-inducible
hg19_v2_chr3_+_101292939_101293063	0.720374	UCACAUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr6_+_96463840_96463892	0.714588	UCACAUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr3_-_135914615_135914701	0.710023	UCACAUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr16_+_81069433_81069462	0.705742	UCACAUU	ENST00000299575.4|ATMIN|ENSG00000166454.5|ATM interactor
hg19_v2_chr12_-_106641728_106641805	0.701412	UCACAUU	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr11_-_9286921_9286937	0.700499	UCACAUU	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chr11_+_63753883_63753929	0.694615	UCACAUU	ENST00000538426.1|OTUB1|ENSG00000167770.7|OTU domain, ubiquitin aldehyde binding 1 	ENST00000543004.1|OTUB1|ENSG00000167770.7|OTU domain, ubiquitin aldehyde binding 1
hg19_v2_chr1_+_150337144_150337194	0.679088	UCACAUU	ENST00000539519.1|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369067.3|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369068.4|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2
hg19_v2_chr3_-_119813264_119813272	0.672419	UCACAUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr3_+_62304712_62304732	0.669766	UCACAUU	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr13_-_79233314_79233331	0.66702	UCACAUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr4_+_123747834_123747863	0.659375	UCACAUU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr14_-_53162361_53162513	0.657131	UCACAUU	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr3_+_52232102_52232160	0.652741	UCACAUU	ENST00000469224.1|ALAS1|ENSG00000023330.10|aminolevulinate, delta-, synthase 1 	ENST00000394965.2|ALAS1|ENSG00000023330.10|aminolevulinate, delta-, synthase 1 	ENST00000310271.2|ALAS1|ENSG00000023330.10|aminolevulinate, delta-, synthase 1 	ENST00000484952.1|ALAS1|ENSG00000023330.10|aminolevulinate, delta-, synthase 1
hg19_v2_chr19_+_41305406_41305450	0.652258	UCACAUU	ENST00000406058.2|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2 	ENST00000593726.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2
hg19_v2_chr10_+_90750378_90750444	0.646987	UCACAUU	ENST00000355740.2|FAS|ENSG00000026103.15|Fas cell surface death receptor 	ENST00000352159.4|FAS|ENSG00000026103.15|Fas cell surface death receptor
hg19_v2_chr17_+_43224684_43224684	0.642487	UCACAUU	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr19_-_29704448_29704448	0.638857	UCACAUU	ENST00000304863.4|UQCRFS1|ENSG00000169021.4|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
hg19_v2_chr8_-_81083731_81083813	0.635162	UCACAUU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr12_+_94542459_94542513	0.630211	UCACAUU	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chrX_-_41782249_41782287	0.613664	UCACAUU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr9_-_135230336_135230398	0.613523	UCACAUU	ENST00000224140.5|SETX|ENSG00000107290.9|senataxin 	ENST00000372169.2|SETX|ENSG00000107290.9|senataxin 	ENST00000393220.1|SETX|ENSG00000107290.9|senataxin
hg19_v2_chr20_+_60718785_60718853	0.598002	UCACAUU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr8_+_37594130_37594169	0.597315	UCACAUU	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr18_-_31803435_31803515	0.592422	UCACAUU	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr12_+_104850740_104850768	0.575708	UCACAUU	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr17_-_1465924_1466129	0.56466	UCACAUU	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr11_+_68080077_68080127	0.561066	UCACAUU	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr11_-_88796803_88796827	0.551732	UCACAUU	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr8_-_71316021_71316068	0.531178	UCACAUU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chrX_-_6146876_6146924	0.530262	UCACAUU	ENST00000381095.3|NLGN4X|ENSG00000146938.10|neuroligin 4, X-linked
hg19_v2_chr4_-_74864386_74864496	0.509469	UCACAUU	ENST00000296027.4|CXCL5|ENSG00000163735.6|chemokine (C-X-C motif) ligand 5
hg19_v2_chr3_-_79068594_79068627	0.503381	UCACAUU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr1_-_24194771_24194851	0.502755	UCACAUU	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr15_+_67358163_67358192	0.485867	UCACAUU	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chrX_-_124097620_124097666	0.478251	UCACAUU	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr16_-_75467318_75467408	0.477853	UCACAUU	ENST00000283882.3|CFDP1|ENSG00000153774.4|craniofacial development protein 1
hg19_v2_chr1_+_218519577_218519594	0.465417	UCACAUU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr3_+_173116225_173116242	0.453947	UCACAUU	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr4_+_166248775_166248901	0.452497	UCACAUU	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chrX_-_53449593_53449677	0.446993	UCACAUU	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr8_+_76452097_76452126	0.443041	UCACAUU	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr18_+_55711575_55711628	0.429319	UCACAUU	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr19_+_13135386_13135435	0.428662	UCACAUU	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr10_+_134351319_134351353	0.428635	UCACAUU	ENST00000368594.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa 	ENST00000368593.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa
hg19_v2_chr4_+_170541660_170541677	0.425104	UCACAUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr9_+_100395891_100395922	0.423298	UCACAUU	ENST00000375147.3|NCBP1|ENSG00000136937.8|nuclear cap binding protein subunit 1, 80kDa
hg19_v2_chr12_+_68042495_68042508	0.416806	UCACAUU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr1_-_93645818_93645918	0.413145	UCACAUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr4_+_151503077_151503132	0.411986	UCACAUU	ENST00000317605.4|MAB21L2|ENSG00000181541.4|mab-21-like 2 (C. elegans)
hg19_v2_chr16_-_56485257_56485287	0.409376	UCACAUU	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr8_-_72268889_72268955	0.391552	UCACAUU	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr1_+_154377669_154377699	0.375288	UCACAUU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr1_-_39347255_39347303	0.372988	UCACAUU	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr11_+_35684288_35684353	0.363325	UCACAUU	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr5_+_50678921_50678921	0.357732	UCACAUU	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chr5_-_114961858_114961876	0.351581	UCACAUU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr10_+_88516396_88516426	0.349323	UCACAUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr4_+_38665810_38665827	0.345862	UCACAUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr21_-_47706205_47706223	0.344566	UCACAUU	ENST00000397708.1|MCM3AP|ENSG00000160294.6|minichromosome maintenance complex component 3 associated protein
hg19_v2_chrX_+_115567767_115567790	0.340354	UCACAUU	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr10_+_112631547_112631596	0.328201	UCACAUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr10_+_31608054_31608156	0.327838	UCACAUU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr19_+_45973120_45973171	0.322892	UCACAUU	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr20_+_5107420_5107432	0.319642	UCACAUU	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr13_-_103053946_103054124	0.314809	UCACAUU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chrX_+_16964794_16964861	0.306856	UCACAUU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr3_+_140660634_140660729	0.294134	UCACAUU	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr15_-_56209306_56209344	0.286599	UCACAUU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr1_+_36396677_36396749	0.280508	UCACAUU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr16_-_58231782_58231856	0.279165	UCACAUU	ENST00000565188.1|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide 	ENST00000262506.3|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide
hg19_v2_chr11_+_94277017_94277097	0.271928	UCACAUU	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr6_-_116381918_116381977	0.270367	UCACAUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr17_+_58677539_58677610	0.267252	UCACAUU	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr17_+_75136980_75137028	0.263492	UCACAUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr14_+_67707826_67707994	0.261663	UCACAUU	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr7_+_89975979_89976052	0.261507	UCACAUU	ENST00000257659.8|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000222511.6|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000417207.1|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative)
hg19_v2_chr20_-_17949363_17949454	0.253805	UCACAUU	ENST00000377759.4|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606557.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606602.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000486039.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000481323.1|SNX5|ENSG00000089006.12|sorting nexin 5
hg19_v2_chr8_-_119124045_119124097	0.246348	UCACAUU	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr3_+_33155444_33155492	0.241065	UCACAUU	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr14_+_50234309_50234330	0.226507	UCACAUU	ENST00000298307.5|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr3_-_138553594_138553684	0.226224	UCACAUU	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr2_-_40679186_40679297	0.222079	UCACAUU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr2_+_85766280_85766299	0.208409	UCACAUU	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr19_-_55881741_55881837	0.203793	UCACAUU	ENST00000264563.2|IL11|ENSG00000095752.2|interleukin 11 	ENST00000590625.1|IL11|ENSG00000095752.2|interleukin 11 	ENST00000585513.1|IL11|ENSG00000095752.2|interleukin 11
hg19_v2_chr6_+_117996621_117996665	0.196073	UCACAUU	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr14_-_57735528_57735726	0.189172	UCACAUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_-_40755987_40756077	0.182635	UCACAUU	ENST00000337702.4|TTC33|ENSG00000113638.8|tetratricopeptide repeat domain 33
hg19_v2_chr2_-_70475730_70475798	0.182049	UCACAUU	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr11_+_69455855_69455974	0.176829	UCACAUU	ENST00000227507.2|CCND1|ENSG00000110092.3|cyclin D1 	ENST00000536559.1|CCND1|ENSG00000110092.3|cyclin D1
hg19_v2_chr6_-_137113604_137113666	0.172534	UCACAUU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr6_+_87865262_87865339	0.172446	UCACAUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr9_-_38069208_38069267	0.171527	UCACAUU	ENST00000377707.3|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B 	ENST00000377700.4|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B
hg19_v2_chr3_-_98620500_98620547	0.150855	UCACAUU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr1_-_32801825_32801980	0.150617	UCACAUU	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chrX_+_73641286_73641400	0.14906	UCACAUU	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr3_+_111805182_111805210	0.144512	UCACAUU	ENST00000430855.1|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000431717.2|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000264848.5|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52
hg19_v2_chr1_+_179923873_179923954	0.142976	UCACAUU	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr20_-_43150601_43150751	0.142492	UCACAUU	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr4_+_79697495_79697538	0.141441	UCACAUU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr9_+_91003271_91003386	0.137485	UCACAUU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr3_-_50365607_50365676	0.132822	UCACAUU	ENST00000232496.4|TUSC2|ENSG00000114383.5|tumor suppressor candidate 2
hg19_v2_chr22_+_45559722_45559881	0.125127	UCACAUU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr3_-_122233723_122233797	0.119469	UCACAUU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr1_-_55680762_55680786	0.114732	UCACAUU	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chrX_+_28605516_28605608	0.112148	UCACAUU	ENST00000378993.1|IL1RAPL1|ENSG00000169306.5|interleukin 1 receptor accessory protein-like 1
hg19_v2_chr8_+_134203273_134203289	0.111568	UCACAUU	ENST00000250160.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr19_-_46476791_46476819	0.10829	UCACAUU	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr16_-_3930724_3930735	0.106675	UCACAUU	ENST00000262367.5|CREBBP|ENSG00000005339.8|CREB binding protein
hg19_v2_chr1_-_6761855_6761984	0.105018	UCACAUU	ENST00000426784.1|DNAJC11|ENSG00000007923.11|DnaJ (Hsp40) homolog, subfamily C, member 11 	ENST00000377573.5|DNAJC11|ENSG00000007923.11|DnaJ (Hsp40) homolog, subfamily C, member 11 	ENST00000377577.5|DNAJC11|ENSG00000007923.11|DnaJ (Hsp40) homolog, subfamily C, member 11 	ENST00000294401.7|DNAJC11|ENSG00000007923.11|DnaJ (Hsp40) homolog, subfamily C, member 11
hg19_v2_chr17_+_61699766_61699826	0.103916	UCACAUU	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr9_+_32384617_32384709	0.0967629	UCACAUU	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr12_+_72233487_72233563	0.0743349	UCACAUU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr15_+_63481668_63481812	0.0742473	UCACAUU	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr22_+_21213259_21213271	0.0716101	UCACAUU	ENST00000215730.7|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr10_-_101491828_101491900	0.0710914	UCACAUU	ENST00000370483.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast) 	ENST00000016171.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast)
hg19_v2_chr20_+_1875110_1875154	0.070944	UCACAUU	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr18_+_32558208_32558340	0.0697117	UCACAUU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr2_+_42396472_42396563	0.0679106	UCACAUU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr9_+_34990219_34990312	0.059509	UCACAUU	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr2_+_152214098_152214115	0.0590412	UCACAUU	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr10_-_119806085_119806114	0.0574839	UCACAUU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr1_+_33283043_33283198	0.0465211	UCACAUU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr3_-_15374033_15374136	0.0442296	UCACAUU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr2_+_24714729_24714927	0.0438881	UCACAUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr9_+_37485932_37485990	0.0432352	UCACAUU	ENST00000377798.4|POLR1E|ENSG00000137054.11|polymerase (RNA) I polypeptide E, 53kDa 	ENST00000442009.2|POLR1E|ENSG00000137054.11|polymerase (RNA) I polypeptide E, 53kDa
hg19_v2_chr7_-_27135591_27135658	0.0424447	UCACAUU	ENST00000343060.4|HOXA1|ENSG00000105991.7|homeobox A1 	ENST00000355633.5|HOXA1|ENSG00000105991.7|homeobox A1
hg19_v2_chr9_+_117373486_117373645	0.0398964	UCACAUU	ENST00000288502.4|C9orf91|ENSG00000157693.10|chromosome 9 open reading frame 91 	ENST00000374049.4|C9orf91|ENSG00000157693.10|chromosome 9 open reading frame 91
hg19_v2_chr5_+_32711419_32711540	0.0381869	UCACAUU	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr5_-_178054105_178054119	0.0362411	UCACAUU	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr4_-_23891693_23891706	0.0275962	UCACAUU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr6_+_76458909_76458934	0.0242781	UCACAUU	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr3_+_61547585_61547585	0.0161725	UCACAUU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr20_-_10654639_10654694	0.013622	UCACAUU	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr4_-_129208940_129208976	0.00854546	UCACAUU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr22_-_31885727_31885923	0.00607756	UCACAUU	ENST00000330125.5|EIF4ENIF1|ENSG00000184708.13|eukaryotic translation initiation factor 4E nuclear import factor 1 	ENST00000344710.5|EIF4ENIF1|ENSG00000184708.13|eukaryotic translation initiation factor 4E nuclear import factor 1 	ENST00000397518.1|EIF4ENIF1|ENSG00000184708.13|eukaryotic translation initiation factor 4E nuclear import factor 1
hg19_v2_chr11_-_79151695_79151710	0.00343109	UCACAUU	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
