hg19_v1_chr8_+_17396285_17396392	13.6867	LHX3,4.p2	NM_001164771|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	NM_003046|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC069648|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC104905|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC113661|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC143583|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v1_chr6_-_29527701_29527701	10.5728	LHX3,4.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg19_v1_chr7_-_92777657_92777684	10.4588	LHX3,4.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg19_v1_chr4_-_76957139_76957349	8.72707	LHX3,4.p2	BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11	DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11	EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11	Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11	U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11	U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11	NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11
hg19_v1_chr10_+_91152321_91152405	7.34292	LHX3,4.p2	NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1
hg19_v1_chr4_-_76944585_76944688	5.26252	LHX3,4.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg19_v1_chr1_-_150738292_150738432	4.45177	LHX3,4.p2	AK226095|CTSS|1520|cathepsin S	M90696|CTSS|1520|cathepsin S	NM_001199739|CTSS|1520|cathepsin S	NM_004079|CTSS|1520|cathepsin S
hg19_v1_chr9_+_118916069_118916071	4.31895	LHX3,4.p2	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg19_v1_chr1_-_150738232_150738233	4.30095	LHX3,4.p2	BC002642|CTSS|1520|cathepsin S
hg19_v1_chr21_+_43619798_43619921	4.17529	LHX3,4.p2	AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg19_v1_chr7_-_139763520_139763520	4.04432	LHX3,4.p2	BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12	NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12
hg19_v1_chr3_-_79817058_79817058	3.92281	LHX3,4.p2	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v1_chr6_+_26440699_26440780	3.67511	LHX3,4.p2	NM_001242803|BTN3A3|10384|butyrophilin, subfamily 3, member A3	NM_006994|BTN3A3|10384|butyrophilin, subfamily 3, member A3	NM_197974|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK291722|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK301553|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AB209581|BTN3A3|10384|butyrophilin, subfamily 3, member A3	BC015815|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK223279|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK223301|BTN3A3|10384|butyrophilin, subfamily 3, member A3	U90548|BTN3A3|10384|butyrophilin, subfamily 3, member A3
hg19_v1_chr1_-_150738255_150738281	3.62967	LHX3,4.p2	AK301472|CTSS|1520|cathepsin S	AK314482|CTSS|1520|cathepsin S
hg19_v1_chr12_-_16760935_16761147	3.461	LHX3,4.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr3_-_157221362_157221414	3.28432	LHX3,4.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr5_-_150467220_150467220	3.20536	LHX3,4.p2	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1	NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1
hg19_v1_chr15_+_67418053_67418193	3.1813	LHX3,4.p2	NM_001145102|SMAD3|4088|SMAD family member 3	AK316017|SMAD3|4088|SMAD family member 3
hg19_v1_chr4_-_122148620_122148620	3.12579	LHX3,4.p2	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3	NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr2_+_162272892_162272921	3.10993	LHX3,4.p2	U49250|TBR1|10716|T-box, brain, 1	HQ258587|TBR1|10716|T-box, brain, 1
hg19_v1_chr7_-_107880492_107880613	3.06576	LHX3,4.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr5_-_59783885_59783924	2.95126	LHX3,4.p2	AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr11_-_117748200_117748200	2.86485	LHX3,4.p2	NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr6_+_114178516_114178953	2.83883	LHX3,4.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr3_-_78666943_78667028	2.76386	LHX3,4.p2	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v1_chr15_+_34261088_34261088	2.69625	LHX3,4.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg19_v1_chrX_+_144908927_144909195	2.68574	LHX3,4.p2	NM_004709|CXorf1|9142|chromosome X open reading frame 1	Y08902|CXorf1|9142|chromosome X open reading frame 1	BC113600|CXorf1|9142|chromosome X open reading frame 1	BC113604|CXorf1|9142|chromosome X open reading frame 1	HQ258719|CXorf1|9142|chromosome X open reading frame 1
hg19_v1_chr8_+_54764367_54764459	2.6547	LHX3,4.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr2_+_102979096_102979120	2.55709	LHX3,4.p2	BC069575|IL18R1|8809|interleukin 18 receptor 1	BC093975|IL18R1|8809|interleukin 18 receptor 1	BC093977|IL18R1|8809|interleukin 18 receptor 1	BC143403|IL18R1|8809|interleukin 18 receptor 1	BC143405|IL18R1|8809|interleukin 18 receptor 1	NM_003855|IL18R1|8809|interleukin 18 receptor 1	U43672|IL18R1|8809|interleukin 18 receptor 1	AY192162|IL18R1|8809|interleukin 18 receptor 1
hg19_v1_chr4_+_186990308_186990350	2.4795	LHX3,4.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg19_v1_chr5_-_58882274_58882324	2.21014	LHX3,4.p2	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr7_-_25268057_25268104	2.20036	LHX3,4.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg19_v1_chr6_+_26402464_26402581	2.19563	LHX3,4.p2	AK291162|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_001145008|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_001145009|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_007048|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_194441|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK290193|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK295720|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC118586|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC121800|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK299327|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC065567|BTN3A1|11119|butyrophilin, subfamily 3, member A1	U90552|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK298652|BTN3A1|11119|butyrophilin, subfamily 3, member A1	Y07827|BTN3A1|11119|butyrophilin, subfamily 3, member A1
hg19_v1_chr12_+_54410893_54410956	2.10009	LHX3,4.p2	BC034922|HOXC5|3222|homeobox C5	BC044635|HOXC5|3222|homeobox C5	M16938|HOXC6|3223|homeobox C6	AK314829|HOXC6|3223|homeobox C6
hg19_v1_chr4_+_74606222_74606375	2.07504	LHX3,4.p2	NM_000584|IL8|3576|interleukin 8	Y00787|IL8|3576|interleukin 8	AK131067|IL8|3576|interleukin 8	AK311874|IL8|3576|interleukin 8	M17017|IL8|3576|interleukin 8	M26383|IL8|3576|interleukin 8	BC013615|IL8|3576|interleukin 8	DQ890564|IL8|3576|interleukin 8	DQ893727|IL8|3576|interleukin 8	BT007067|IL8|3576|interleukin 8	CR542151|IL8|3576|interleukin 8	Z11686|IL8|3576|interleukin 8
hg19_v1_chr5_-_13944588_13944588	1.99992	LHX3,4.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg19_v1_chr9_-_85882093_85882201	1.99853	LHX3,4.p2	GQ129452|FRMD3|257019|FERM domain containing 3	BC023560|FRMD3|257019|FERM domain containing 3	NM_001244962|FRMD3|257019|FERM domain containing 3
hg19_v1_chr5_-_160279045_160279218	1.93034	LHX3,4.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg19_v1_chr3_-_57234279_57234279	1.91383	LHX3,4.p2	NM_003865|HESX1|8820|HESX homeobox 1
hg19_v1_chr8_+_104310660_104310689	1.85208	LHX3,4.p2	NM_001164615|FZD6|8323|frizzled family receptor 6	BX640609|FZD6|8323|frizzled family receptor 6	AK313789|FZD6|8323|frizzled family receptor 6
hg19_v1_chr3_-_112564789_112564796	1.83404	LHX3,4.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like	NM_001199215|CD200R1L|344807|CD200 receptor 1-like
hg19_v1_chr5_+_67586466_67586627	1.77835	LHX3,4.p2	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr20_+_5987897_5987901	1.74619	LHX3,4.p2	NM_001127458|CRLS1|54675|cardiolipin synthase 1	AK310368|CRLS1|54675|cardiolipin synthase 1
hg19_v1_chr4_+_77953942_77954068	1.7135	LHX3,4.p2	AK124592|SEPT11|55752|septin 11
hg19_v1_chr5_-_58295758_58295758	1.69272	LHX3,4.p2	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr2_-_175712276_175712345	1.65648	LHX3,4.p2	AK055060|CHN1|1123|chimerin (chimaerin) 1	NM_001206602|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chr1_-_89664510_89664632	1.64892	LHX3,4.p2	AK304245|GBP4|115361|guanylate binding protein 4	AF288814|GBP4|115361|guanylate binding protein 4	AK131094|GBP4|115361|guanylate binding protein 4	AL832576|GBP4|115361|guanylate binding protein 4	BC070055|GBP4|115361|guanylate binding protein 4	BC017889|GBP4|115361|guanylate binding protein 4	AK312417|GBP4|115361|guanylate binding protein 4	BC008421|GBP4|115361|guanylate binding protein 4	NM_052941|GBP4|115361|guanylate binding protein 4
hg19_v1_chr5_-_58571916_58571944	1.60447	LHX3,4.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr2_+_168043792_168043792	1.56837	LHX3,4.p2	EF119711|XIRP2|129446|xin actin-binding repeat containing 2	EF119717|XIRP2|129446|xin actin-binding repeat containing 2	NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2	NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2
hg19_v1_chr10_+_91087601_91087771	1.55212	LHX3,4.p2	NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr12_+_113376001_113376193	1.54372	LHX3,4.p2	AB044545|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa
hg19_v1_chr5_+_96212167_96212209	1.53289	LHX3,4.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg19_v1_chr7_+_28452143_28452143	1.46854	LHX3,4.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chrX_+_50027539_50027539	1.45448	LHX3,4.p2	AJ314764|CCNB3|85417|cyclin B3	AJ314765|CCNB3|85417|cyclin B3	AJ314766|CCNB3|85417|cyclin B3	AJ416458|CCNB3|85417|cyclin B3	NM_033031|CCNB3|85417|cyclin B3	NM_033670|CCNB3|85417|cyclin B3
hg19_v1_chr1_+_206643830_206643860	1.44841	LHX3,4.p2	BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr6_+_31913852_31913894	1.44602	LHX3,4.p2	BC004143|CFB|629|complement factor B	BC007990|CFB|629|complement factor B	AK223400|CFB|629|complement factor B	S67310|CFB|629|complement factor B
hg19_v1_chr11_-_102651321_102651358	1.42539	LHX3,4.p2	BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)
hg19_v1_chr16_+_70657894_70657894	1.42262	LHX3,4.p2	NM_001172772|IL34|146433|interleukin 34
hg19_v1_chr1_+_79115476_79115521	1.40395	LHX3,4.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44
hg19_v1_chr2_-_31352489_31352505	1.40339	LHX3,4.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr6_+_12717036_12717051	1.3985	LHX3,4.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr1_-_231005334_231005334	1.39189	LHX3,4.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg19_v1_chr5_+_67588395_67588510	1.38858	LHX3,4.p2	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr19_+_7504573_7504573	1.36593	LHX3,4.p2	AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v1_chr3_+_11294384_11294384	1.35891	LHX3,4.p2	BC060802|HRH1|3269|histamine receptor H1	NM_000861|HRH1|3269|histamine receptor H1
hg19_v1_chr6_+_31913708_31913751	1.35348	LHX3,4.p2	NM_001710|CFB|629|complement factor B	AK304042|CFB|629|complement factor B
hg19_v1_chrX_-_132162297_132162299	1.34218	LHX3,4.p2	BC101189|USP26|83844|ubiquitin specific peptidase 26	BC101190|USP26|83844|ubiquitin specific peptidase 26	BC101191|USP26|83844|ubiquitin specific peptidase 26	BC101192|USP26|83844|ubiquitin specific peptidase 26	BC069073|USP26|83844|ubiquitin specific peptidase 26	AF285593|USP26|83844|ubiquitin specific peptidase 26	NM_031907|USP26|83844|ubiquitin specific peptidase 26
hg19_v1_chr17_-_39165343_39165365	1.33758	LHX3,4.p2	BC113078|KRTAP3-1|83896|keratin associated protein 3-1	BC113077|KRTAP3-1|83896|keratin associated protein 3-1	AJ406931|KRTAP3-1|83896|keratin associated protein 3-1	NM_031958|KRTAP3-1|83896|keratin associated protein 3-1
hg19_v1_chr12_+_9980076_9980116	1.33353	LHX3,4.p2	AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1
hg19_v1_chr6_+_55039070_55039119	1.3327	LHX3,4.p2	NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2	AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2
hg19_v1_chr20_-_18477811_18477886	1.31037	LHX3,4.p2	EU446767|RBBP9|10741|retinoblastoma binding protein 9	AL832411|RBBP9|10741|retinoblastoma binding protein 9	AF237576|RBBP9|10741|retinoblastoma binding protein 9	BC020627|RBBP9|10741|retinoblastoma binding protein 9	BC015938|RBBP9|10741|retinoblastoma binding protein 9	NM_006606|RBBP9|10741|retinoblastoma binding protein 9
hg19_v1_chr4_-_120243257_120243315	1.30119	LHX3,4.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg19_v1_chr6_+_31553955_31554025	1.28386	LHX3,4.p2	NM_205838|LST1|7940|leukocyte specific transcript 1	NM_205839|LST1|7940|leukocyte specific transcript 1	BX647293|LST1|7940|leukocyte specific transcript 1	AF000425|LST1|7940|leukocyte specific transcript 1
hg19_v1_chr1_+_206643786_206643827	1.28176	LHX3,4.p2	AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr4_-_122137781_122137781	1.28056	LHX3,4.p2	AK301058|TNIP3|79931|TNFAIP3 interacting protein 3	NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr1_-_154578775_154578775	1.27134	LHX3,4.p2	NM_001193495|ADAR|103|adenosine deaminase, RNA-specific	X79448|ADAR|103|adenosine deaminase, RNA-specific
hg19_v1_chr6_+_31913763_31913812	1.24327	LHX3,4.p2	AK130533|CFB|629|complement factor B
hg19_v1_chr7_-_139762339_139762883	1.23022	LHX3,4.p2	AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12	BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12
hg19_v1_chr5_-_1882764_1882879	1.22764	LHX3,4.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg19_v1_chr8_+_132991171_132991247	1.21486	LHX3,4.p2	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)
hg19_v1_chr7_-_122339186_122339209	1.21143	LHX3,4.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg19_v1_chr5_-_16742336_16742338	1.20752	LHX3,4.p2	AK316138|MYO10|4651|myosin X
hg19_v1_chr2_+_152214105_152214253	1.2046	LHX3,4.p2	NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6
hg19_v1_chr11_-_71524890_71524923	1.19929	LHX3,4.p2	BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene
hg19_v1_chr17_-_49124128_49124328	1.1978	LHX3,4.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr3_+_149192367_149192437	1.19067	LHX3,4.p2	NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4
hg19_v1_chr19_-_3557566_3557583	1.18211	LHX3,4.p2	BC068439|MFSD12|126321|major facilitator superfamily domain containing 12	NM_001042680|MFSD12|126321|major facilitator superfamily domain containing 12	NM_021731|MFSD12|126321|major facilitator superfamily domain containing 12	NM_174983|MFSD12|126321|major facilitator superfamily domain containing 12
hg19_v1_chr11_-_5345530_5345581	1.17969	LHX3,4.p2	HQ258158|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2	BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2	NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2
hg19_v1_chr7_+_18548899_18548948	1.1528	LHX3,4.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr2_-_99871569_99871569	1.14376	LHX3,4.p2	NM_175735|LYG2|254773|lysozyme G-like 2
hg19_v1_chrX_+_140982451_140982451	1.14331	LHX3,4.p2	NM_177456|MAGEC3|139081|melanoma antigen family C, 3
hg19_v1_chr6_+_123317377_123317389	1.13783	LHX3,4.p2	AK295158|CLVS2|134829|clavesin 2
hg19_v1_chrX_-_110655384_110655459	1.13699	LHX3,4.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr3_-_11623829_11623837	1.12661	LHX3,4.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr9_+_111624545_111624602	1.1203	LHX3,4.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg19_v1_chr1_+_155853546_155853601	1.11912	LHX3,4.p2	AK026178|SYT11|23208|synaptotagmin XI
hg19_v1_chr15_+_100173182_100173356	1.11301	LHX3,4.p2	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A	BC053871|MEF2A|4205|myocyte enhancer factor 2A	AM392739|MEF2A|4205|myocyte enhancer factor 2A	AM393856|MEF2A|4205|myocyte enhancer factor 2A	EU446488|MEF2A|4205|myocyte enhancer factor 2A
hg19_v1_chr12_-_89920038_89920038	1.10511	LHX3,4.p2	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough	NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough	NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough	NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)
hg19_v1_chr1_+_50574601_50574768	1.10041	LHX3,4.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr5_-_156485969_156485969	1.08833	LHX3,4.p2	AF043724|HAVCR1|26762|hepatitis A virus cellular receptor 1	NM_001173393|HAVCR1|26762|hepatitis A virus cellular receptor 1
hg19_v1_chr5_-_156486128_156486131	1.08654	LHX3,4.p2	AK298259|HAVCR1|26762|hepatitis A virus cellular receptor 1
hg19_v1_chr5_+_6746100_6746144	1.06639	LHX3,4.p2	AK308405|PAPD7|11044|PAP associated domain containing 7	NM_001171806|PAPD7|11044|PAP associated domain containing 7	AK303516|PAPD7|11044|PAP associated domain containing 7
hg19_v1_chr8_-_57026540_57026540	1.03621	LHX3,4.p2	BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog
hg19_v1_chr2_+_102508333_102508351	1.03549	LHX3,4.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr2_+_27719702_27719764	1.02551	LHX3,4.p2	NM_001486|GCKR|2646|glucokinase (hexokinase 4) regulator	Z48475|GCKR|2646|glucokinase (hexokinase 4) regulator	AK298448|GCKR|2646|glucokinase (hexokinase 4) regulator	AK303784|GCKR|2646|glucokinase (hexokinase 4) regulator	AK291846|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130481|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130483|GCKR|2646|glucokinase (hexokinase 4) regulator	AK309599|GCKR|2646|glucokinase (hexokinase 4) regulator	HQ258318|GCKR|2646|glucokinase (hexokinase 4) regulator
hg19_v1_chr6_-_169654047_169654181	1.02143	LHX3,4.p2	L12350|THBS2|7058|thrombospondin 2	NM_003247|THBS2|7058|thrombospondin 2	AK292429|THBS2|7058|thrombospondin 2
hg19_v1_chr21_-_32185560_32185569	1.00006	LHX3,4.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg19_v1_chr17_-_39093671_39093835	0.994355	LHX3,4.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr1_-_153321021_153321044	0.992807	LHX3,4.p2	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4	NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4	AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4
hg19_v1_chr3_+_130569368_130569444	0.985827	LHX3,4.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chrX_+_70765479_70765566	0.98158	LHX3,4.p2	AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chrX_-_15332680_15332680	0.980426	LHX3,4.p2	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr9_+_12693385_12693466	0.958569	LHX3,4.p2	NM_000550|TYRP1|7306|tyrosinase-related protein 1	X51420|TYRP1|7306|tyrosinase-related protein 1	BC052608|TYRP1|7306|tyrosinase-related protein 1
hg19_v1_chr3_-_119582422_119582427	0.957178	LHX3,4.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr14_+_29236171_29236286	0.944719	LHX3,4.p2	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg19_v1_chr17_-_39254374_39254374	0.936065	LHX3,4.p2	NM_031960|KRTAP4-8|728224|keratin associated protein 4-8
hg19_v1_chrX_+_99839789_99840014	0.92879	LHX3,4.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg19_v1_chr10_-_75335415_75335432	0.920249	LHX3,4.p2	AJ583820|USP54|159195|ubiquitin specific peptidase 54	NM_152586|USP54|159195|ubiquitin specific peptidase 54
hg19_v1_chr16_-_72128214_72128214	0.917745	LHX3,4.p2	NM_001142318|TXNL4B|54957|thioredoxin-like 4B
hg19_v1_chr10_+_18549583_18549697	0.911203	LHX3,4.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr1_-_205325915_205326165	0.896777	LHX3,4.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg19_v1_chr21_+_25801042_25801094	0.895732	LHX3,4.p2	AK124194|FLJ42200|400860|FLJ42200 protein
hg19_v1_chr3_+_101546833_101547087	0.893505	LHX3,4.p2	NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
hg19_v1_chr1_-_149900143_149900235	0.891188	LHX3,4.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr3_-_167191808_167191833	0.885291	LHX3,4.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr1_+_174417211_174417249	0.884947	LHX3,4.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52	HQ995526|GPR52|9293|G protein-coupled receptor 52
hg19_v1_chr12_-_46633551_46633675	0.882736	LHX3,4.p2	AK074851|SLC38A1|81539|solute carrier family 38, member 1	DQ891017|SLC38A1|81539|solute carrier family 38, member 1	EU176550|SLC38A1|81539|solute carrier family 38, member 1	AK074949|SLC38A1|81539|solute carrier family 38, member 1	AK313731|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr1_+_179560747_179560756	0.867423	LHX3,4.p2	AK126889|TDRD5|163589|tudor domain containing 5	NM_001199091|TDRD5|163589|tudor domain containing 5	NM_001199085|TDRD5|163589|tudor domain containing 5	NM_173533|TDRD5|163589|tudor domain containing 5
hg19_v1_chr18_+_61582744_61582744	0.857402	LHX3,4.p2	BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg19_v1_chr10_+_24755459_24755479	0.855463	LHX3,4.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg19_v1_chr13_+_109248499_109248529	0.852325	LHX3,4.p2	AB020672|MYO16|23026|myosin XVI	BC146791|MYO16|23026|myosin XVI	NM_015011|MYO16|23026|myosin XVI	AL834447|MYO16|23026|myosin XVI
hg19_v1_chr3_-_71294229_71294315	0.851433	LHX3,4.p2	AK074321|FOXP1|27086|forkhead box P1	NM_001244814|FOXP1|27086|forkhead box P1
hg19_v1_chr3_-_157213138_157213294	0.844828	LHX3,4.p2	HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr5_+_60933635_60933635	0.840628	LHX3,4.p2	AK094862|C5orf64|285668|chromosome 5 open reading frame 64	NM_173667|C5orf64|285668|chromosome 5 open reading frame 64
hg19_v1_chr21_-_31538970_31539043	0.833426	LHX3,4.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg19_v1_chr6_-_87804773_87804864	0.827705	LHX3,4.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide
hg19_v1_chr10_-_61900659_61900773	0.827632	LHX3,4.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr1_+_50574589_50574594	0.827129	LHX3,4.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr4_+_175839508_175839558	0.822513	LHX3,4.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg19_v1_chr5_+_147691988_147692026	0.814087	LHX3,4.p2	AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)
hg19_v1_chr16_+_2732526_2732656	0.810074	LHX3,4.p2	BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg19_v1_chr9_-_15250113_15250197	0.806166	LHX3,4.p2	AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B	NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B
hg19_v1_chr3_-_108672547_108672676	0.804517	LHX3,4.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	AB593147|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg19_v1_chr20_+_31805118_31805157	0.803391	LHX3,4.p2	BC041904|BPIFA3|128861|BPI fold containing family A, member 3	NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3	NM_178466|BPIFA3|128861|BPI fold containing family A, member 3	BC066354|BPIFA3|128861|BPI fold containing family A, member 3
hg19_v1_chr3_-_150920946_150920987	0.799767	LHX3,4.p2	AF002986|GPR171|29909|G protein-coupled receptor 171	BC036815|GPR171|29909|G protein-coupled receptor 171	NM_013308|GPR171|29909|G protein-coupled receptor 171
hg19_v1_chr10_+_102732285_102732285	0.795208	LHX3,4.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr11_-_126870654_126870667	0.791974	LHX3,4.p2	AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)
hg19_v1_chrX_-_102531673_102531796	0.789245	LHX3,4.p2	BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5	BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5	NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5
hg19_v1_chr20_-_7921068_7921136	0.788034	LHX3,4.p2	AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v1_chr11_-_117698727_117698806	0.788026	LHX3,4.p2	BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2	BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2	NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2
hg19_v1_chr14_+_67831484_67831578	0.786023	LHX3,4.p2	DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_+_171561138_171561158	0.782842	LHX3,4.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg19_v1_chr16_+_2732475_2732524	0.779483	LHX3,4.p2	NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5	AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg19_v1_chr13_-_70682458_70682624	0.76751	LHX3,4.p2	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)	AB040923|KLHL1|57626|kelch-like 1 (Drosophila)	AK291435|KLHL1|57626|kelch-like 1 (Drosophila)	NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)
hg19_v1_chrX_-_77225134_77225138	0.762655	LHX3,4.p2	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4
hg19_v1_chr16_-_12010518_12010518	0.762644	LHX3,4.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chr12_-_52761254_52761308	0.759104	LHX3,4.p2	X99140|KRT85|3891|keratin 85	NM_002283|KRT85|3891|keratin 85
hg19_v1_chr12_-_53994783_53994804	0.756899	LHX3,4.p2	X57197|ATF7|11016|activating transcription factor 7	NM_001130059|ATF7|11016|activating transcription factor 7
hg19_v1_chr6_+_26365397_26365508	0.755344	LHX3,4.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr1_-_57045235_57045256	0.753289	LHX3,4.p2	NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B
hg19_v1_chr14_+_75898836_75898836	0.745495	LHX3,4.p2	BC051303|JDP2|122953|Jun dimerization protein 2	NM_001135049|JDP2|122953|Jun dimerization protein 2
hg19_v1_chr6_-_134639195_134639195	0.74188	LHX3,4.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chr3_+_132036276_132036300	0.73656	LHX3,4.p2	M24902|ACPP|55|acid phosphatase, prostate	X52174|ACPP|55|acid phosphatase, prostate	M34840|ACPP|55|acid phosphatase, prostate	DQ893148|ACPP|55|acid phosphatase, prostate	DQ896443|ACPP|55|acid phosphatase, prostate	AB102888|ACPP|55|acid phosphatase, prostate
hg19_v1_chr11_+_124095343_124095397	0.728841	LHX3,4.p2	BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2
hg19_v1_chrX_-_13835012_13835171	0.72804	LHX3,4.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr11_+_5710816_5710877	0.725449	LHX3,4.p2	AK298934|TRIM22|10346|tripartite motif containing 22	NM_001199573|TRIM22|10346|tripartite motif containing 22	NM_006074|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr6_-_27835308_27835370	0.725051	LHX3,4.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr22_-_22863504_22863504	0.718001	LHX3,4.p2	AK097608|ZNF280B|140883|zinc finger protein 280B	NM_080764|ZNF280B|140883|zinc finger protein 280B
hg19_v1_chr17_+_51900238_51900393	0.712643	LHX3,4.p2	NM_032559|KIF2B|84643|kinesin family member 2B	AK057272|KIF2B|84643|kinesin family member 2B	AF333335|KIF2B|84643|kinesin family member 2B	BC033802|KIF2B|84643|kinesin family member 2B	AK302262|KIF2B|84643|kinesin family member 2B
hg19_v1_chr10_+_102222797_102222814	0.712416	LHX3,4.p2	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B	NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B	AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B
hg19_v1_chr17_-_64225496_64225555	0.708234	LHX3,4.p2	DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)
hg19_v1_chr8_-_90996785_90996879	0.697894	LHX3,4.p2	BC143065|NBN|4683|nibrin	BC143066|NBN|4683|nibrin	BC108650|NBN|4683|nibrin	BC016762|NBN|4683|nibrin	BC005293|NBN|4683|nibrin	AF058696|NBN|4683|nibrin	AF051334|NBN|4683|nibrin	AK223256|NBN|4683|nibrin	BC146797|NBN|4683|nibrin	BC136802|NBN|4683|nibrin	BC136803|NBN|4683|nibrin	BC144413|NBN|4683|nibrin
hg19_v1_chr1_+_206643585_206643585	0.695983	LHX3,4.p2	NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr5_+_166711842_166711842	0.695369	LHX3,4.p2	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)
hg19_v1_chr11_+_55594694_55594694	0.691771	LHX3,4.p2	NM_001004739|OR5L2|26338|olfactory receptor, family 5, subfamily L, member 2
hg19_v1_chr14_+_95027760_95027841	0.685896	LHX3,4.p2	AK309586|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4	AK313196|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4	BC014992|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4	NM_006215|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4	BX248760|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4	BX248009|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4
hg19_v1_chr13_-_36050758_36050835	0.682093	LHX3,4.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg19_v1_chr1_-_33430285_33430508	0.678507	LHX3,4.p2	NM_001127361|RNF19B|127544|ring finger protein 19B	NM_153341|RNF19B|127544|ring finger protein 19B	AK131439|RNF19B|127544|ring finger protein 19B
hg19_v1_chr2_-_231989755_231989823	0.672394	LHX3,4.p2	AK313741|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B	BC063123|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B	NM_000867|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B
hg19_v1_chr11_-_126870685_126870765	0.671731	LHX3,4.p2	AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)
hg19_v1_chr6_+_64231626_64231684	0.671001	LHX3,4.p2	CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr4_+_169418167_169418274	0.670916	LHX3,4.p2	AF464873|PALLD|23022|palladin, cytoskeletal associated protein	NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein	NM_016081|PALLD|23022|palladin, cytoskeletal associated protein	BC140850|PALLD|23022|palladin, cytoskeletal associated protein	BC144666|PALLD|23022|palladin, cytoskeletal associated protein
hg19_v1_chr5_-_124080773_124080804	0.668576	LHX3,4.p2	BC131507|ZNF608|57507|zinc finger protein 608	AB033107|ZNF608|57507|zinc finger protein 608	BC151226|ZNF608|57507|zinc finger protein 608	NM_020747|ZNF608|57507|zinc finger protein 608
hg19_v1_chr2_+_68961912_68962234	0.667979	LHX3,4.p2	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25	NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25	AK297056|ARHGAP25|9938|Rho GTPase activating protein 25	AK310742|ARHGAP25|9938|Rho GTPase activating protein 25	AK290396|ARHGAP25|9938|Rho GTPase activating protein 25
hg19_v1_chr22_-_50971007_50971007	0.663214	LHX3,4.p2	NM_001014440|ODF3B|440836|outer dense fiber of sperm tails 3B
hg19_v1_chr11_+_71900958_71900958	0.661475	LHX3,4.p2	NM_000802|FOLR1|2348|folate receptor 1 (adult)
hg19_v1_chr18_-_3845295_3845366	0.661366	LHX3,4.p2	AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr10_+_118083939_118083939	0.659145	LHX3,4.p2	BC044830|C10orf96|374355|chromosome 10 open reading frame 96	NM_198515|C10orf96|374355|chromosome 10 open reading frame 96
hg19_v1_chr12_-_15091441_15091482	0.654006	LHX3,4.p2	BC030218|ERP27|121506|endoplasmic reticulum protein 27	AY358536|ERP27|121506|endoplasmic reticulum protein 27	NM_152321|ERP27|121506|endoplasmic reticulum protein 27	AK056677|ERP27|121506|endoplasmic reticulum protein 27
hg19_v1_chr21_-_27423423_27423464	0.653952	LHX3,4.p2	
hg19_v1_chr18_-_13915534_13915538	0.649977	LHX3,4.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v1_chr22_+_23487512_23487697	0.648267	LHX3,4.p2	AB023061|RAB36|9609|RAB36, member RAS oncogene family	NM_004914|RAB36|9609|RAB36, member RAS oncogene family	BC104989|RAB36|9609|RAB36, member RAS oncogene family	BC104991|RAB36|9609|RAB36, member RAS oncogene family	CR456553|RAB36|9609|RAB36, member RAS oncogene family	AF133588|RAB36|9609|RAB36, member RAS oncogene family	AY336745|RAB36|9609|RAB36, member RAS oncogene family	CU013153|RAB36|9609|RAB36, member RAS oncogene family	CU013441|RAB36|9609|RAB36, member RAS oncogene family	AK296052|RAB36|9609|RAB36, member RAS oncogene family
hg19_v1_chr7_-_126883568_126883568	0.641681	LHX3,4.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr4_+_71263598_71263692	0.636055	LHX3,4.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg19_v1_chr3_+_63953419_63953496	0.635894	LHX3,4.p2	NM_001128149|ATXN7|6314|ataxin 7	AK310745|ATXN7|6314|ataxin 7	AK304062|ATXN7|6314|ataxin 7
hg19_v1_chr8_+_104311058_104311125	0.635571	LHX3,4.p2	NM_001164616|FZD6|8323|frizzled family receptor 6	NM_003506|FZD6|8323|frizzled family receptor 6	AK299341|FZD6|8323|frizzled family receptor 6	AK296824|FZD6|8323|frizzled family receptor 6	BC060836|FZD6|8323|frizzled family receptor 6	BC036106|FZD6|8323|frizzled family receptor 6	AB012911|FZD6|8323|frizzled family receptor 6	AK304092|FZD6|8323|frizzled family receptor 6	AK316544|FZD6|8323|frizzled family receptor 6
hg19_v1_chr12_-_26277807_26278036	0.635352	LHX3,4.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr8_+_123794043_123794164	0.631353	LHX3,4.p2	AB020661|ZHX2|22882|zinc fingers and homeoboxes 2
hg19_v1_chr3_+_46411632_46411632	0.63058	LHX3,4.p2	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5	NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5
hg19_v1_chr7_+_141695678_141695706	0.628995	LHX3,4.p2	AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)
hg19_v1_chr8_-_15095791_15095791	0.628281	LHX3,4.p2	NM_139167|SGCZ|137868|sarcoglycan, zeta
hg19_v1_chr4_-_103998169_103998169	0.626175	LHX3,4.p2	NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2
hg19_v1_chr1_+_50571963_50571963	0.625017	LHX3,4.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr17_-_63009302_63009310	0.623106	LHX3,4.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg19_v1_chr7_+_138144847_138145137	0.620443	LHX3,4.p2	AK312610|TRIM24|8805|tripartite motif containing 24	AK075306|TRIM24|8805|tripartite motif containing 24	NM_003852|TRIM24|8805|tripartite motif containing 24	NM_015905|TRIM24|8805|tripartite motif containing 24	AK302679|TRIM24|8805|tripartite motif containing 24
hg19_v1_chr4_+_88571453_88571458	0.618819	LHX3,4.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr22_+_41697452_41697577	0.617402	LHX3,4.p2	BC152558|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK225891|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK315009|ZC3H7B|23264|zinc finger CCCH-type containing 7B	NM_017590|ZC3H7B|23264|zinc finger CCCH-type containing 7B	BC098378|ZC3H7B|23264|zinc finger CCCH-type containing 7B
hg19_v1_chr10_+_91498724_91498811	0.617223	LHX3,4.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg19_v1_chr2_+_103035148_103035253	0.598309	LHX3,4.p2	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein	AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein	NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein
hg19_v1_chr2_-_80530943_80530984	0.596308	LHX3,4.p2	AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg19_v1_chr6_+_29913400_29913468	0.596133	LHX3,4.p2	
hg19_v1_chr10_+_126630691_126630691	0.592125	LHX3,4.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg19_v1_chr15_-_99057610_99057610	0.590168	LHX3,4.p2	AK097062|FAM169B|283777|family with sequence similarity 169, member B	AK097062|FAM169B|283777|family with sequence similarity 169, member B	NM_182562|FAM169B|283777|family with sequence similarity 169, member B
hg19_v1_chr10_-_69455926_69455948	0.587631	LHX3,4.p2	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3
hg19_v1_chr12_+_93096618_93096618	0.586854	LHX3,4.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg19_v1_chrX_+_24073071_24073085	0.583997	LHX3,4.p2	AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v1_chr4_+_39063851_39063851	0.581726	LHX3,4.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg19_v1_chr17_-_40833840_40833844	0.581554	LHX3,4.p2	AF208237|CCR10|2826|chemokine (C-C motif) receptor 10	AY429103|CCR10|2826|chemokine (C-C motif) receptor 10	EU832758|CCR10|2826|chemokine (C-C motif) receptor 10	GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10	AF215981|CCR10|2826|chemokine (C-C motif) receptor 10	BC098132|CCR10|2826|chemokine (C-C motif) receptor 10	BC098157|CCR10|2826|chemokine (C-C motif) receptor 10	BC098304|CCR10|2826|chemokine (C-C motif) receptor 10	BC099840|CCR10|2826|chemokine (C-C motif) receptor 10	NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10
hg19_v1_chr20_+_9198036_9198081	0.579736	LHX3,4.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr2_+_36923902_36924019	0.574945	LHX3,4.p2	BC061519|VIT|5212|vitrin	AK056772|VIT|5212|vitrin	AK292149|VIT|5212|vitrin	AY358338|VIT|5212|vitrin	AL832679|VIT|5212|vitrin	AF063833|VIT|5212|vitrin	BC128260|VIT|5212|vitrin
hg19_v1_chr2_+_161993465_161993465	0.573834	LHX3,4.p2	NM_004180|TANK|10010|TRAF family member-associated NFKB activator	NM_133484|TANK|10010|TRAF family member-associated NFKB activator	U59863|TANK|10010|TRAF family member-associated NFKB activator	U63830|TANK|10010|TRAF family member-associated NFKB activator
hg19_v1_chr1_-_103496768_103496799	0.571785	LHX3,4.p2	AB208844|COL11A1|1301|collagen, type XI, alpha 1
hg19_v1_chr4_-_100273831_100273916	0.569009	LHX3,4.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg19_v1_chr3_-_54961961_54962071	0.56453	LHX3,4.p2	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1
hg19_v1_chr16_+_2653350_2653485	0.560772	LHX3,4.p2	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene
hg19_v1_chr1_-_57045214_57045220	0.559166	LHX3,4.p2	AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B
hg19_v1_chr2_-_175462428_175462535	0.558656	LHX3,4.p2	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1	X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg19_v1_chr15_+_64680002_64680070	0.558407	LHX3,4.p2	NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4	BC012448|TRIP4|9325|thyroid hormone receptor interactor 4	AK314319|TRIP4|9325|thyroid hormone receptor interactor 4	EU446746|TRIP4|9325|thyroid hormone receptor interactor 4
hg19_v1_chr12_+_54348683_54348713	0.554938	LHX3,4.p2	NM_173860|HOXC12|3228|homeobox C12
hg19_v1_chr4_+_88896838_88896866	0.554665	LHX3,4.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr9_+_4839763_4839773	0.553654	LHX3,4.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg19_v1_chr5_+_156696351_156696361	0.5534	LHX3,4.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr17_-_48207113_48207185	0.553057	LHX3,4.p2	BC142728|SAMD14|201191|sterile alpha motif domain containing 14	BC136485|SAMD14|201191|sterile alpha motif domain containing 14	AY148482|SAMD14|201191|sterile alpha motif domain containing 14	NM_174920|SAMD14|201191|sterile alpha motif domain containing 14	AK291482|SAMD14|201191|sterile alpha motif domain containing 14	AK094209|SAMD14|201191|sterile alpha motif domain containing 14	AK225767|SAMD14|201191|sterile alpha motif domain containing 14	BC141822|SAMD14|201191|sterile alpha motif domain containing 14
hg19_v1_chr4_+_88896868_88896891	0.543275	LHX3,4.p2	AK290104|SPP1|6696|secreted phosphoprotein 1	M83248|SPP1|6696|secreted phosphoprotein 1	AK315461|SPP1|6696|secreted phosphoprotein 1	AF052124|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr11_-_55703875_55703875	0.541482	LHX3,4.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg19_v1_chr18_-_3874252_3874316	0.53911	LHX3,4.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr14_-_57272344_57272383	0.538797	LHX3,4.p2	NM_172337|OTX2|5015|orthodenticle homeobox 2	AB593056|OTX2|5015|orthodenticle homeobox 2
hg19_v1_chrX_+_107288199_107288320	0.533862	LHX3,4.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chr7_+_28338939_28338939	0.532477	LHX3,4.p2	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr6_+_64286348_64286872	0.531779	LHX3,4.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr14_-_61115906_61116274	0.528143	LHX3,4.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr1_+_50569581_50569581	0.52698	LHX3,4.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr21_+_35736322_35736371	0.525808	LHX3,4.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg19_v1_chr8_+_92261515_92261546	0.525546	LHX3,4.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg19_v1_chr4_-_23891608_23891699	0.523821	LHX3,4.p2	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v1_chr6_-_47253962_47254003	0.523177	LHX3,4.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr14_-_47812394_47812437	0.520233	LHX3,4.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v1_chr6_-_136788012_136788012	0.515501	LHX3,4.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr2_+_201170603_201170615	0.513823	LHX3,4.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr1_+_119911395_119911493	0.51356	LHX3,4.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg19_v1_chr5_+_141348450_141348450	0.513511	LHX3,4.p2	NM_004290|RNF14|9604|ring finger protein 14	NM_183398|RNF14|9604|ring finger protein 14	NM_183400|RNF14|9604|ring finger protein 14
hg19_v1_chr17_+_28268622_28268786	0.511353	LHX3,4.p2	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5	BX648689|EFCAB5|374786|EF-hand calcium binding domain 5	BC137519|EFCAB5|374786|EF-hand calcium binding domain 5
hg19_v1_chr16_+_24788568_24788680	0.50937	LHX3,4.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg19_v1_chr1_+_244515936_244515936	0.504171	LHX3,4.p2	BC054479|C1orf100|200159|chromosome 1 open reading frame 100	NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100
hg19_v1_chr22_-_41682187_41682228	0.503302	LHX3,4.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr3_+_178276487_178276617	0.499027	LHX3,4.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr12_-_16757944_16758080	0.498459	LHX3,4.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr5_-_98262217_98262239	0.497747	LHX3,4.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg19_v1_chr8_+_55528626_55528679	0.49612	LHX3,4.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg19_v1_chr4_-_83347222_83347249	0.491952	LHX3,4.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr2_-_207082626_207082770	0.491707	LHX3,4.p2	AK312917|GPR1|2825|G protein-coupled receptor 1	BC067833|GPR1|2825|G protein-coupled receptor 1	AK290976|GPR1|2825|G protein-coupled receptor 1	NM_001098199|GPR1|2825|G protein-coupled receptor 1	NM_005279|GPR1|2825|G protein-coupled receptor 1
hg19_v1_chr3_-_186262114_186262166	0.489627	LHX3,4.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg19_v1_chr7_-_135613197_135613244	0.488745	LHX3,4.p2	AF130088|LUZP6|767558|leucine zipper protein 6
hg19_v1_chr2_+_170366211_170366288	0.486433	LHX3,4.p2	AF333387|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	NM_006063|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	AK316571|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	BC006534|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	AF056929|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	DQ896002|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	EU176397|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10
hg19_v1_chr20_-_52199635_52199635	0.485278	LHX3,4.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg19_v1_chr1_+_12806162_12806171	0.480328	LHX3,4.p2	BC029894|C1orf158|93190|chromosome 1 open reading frame 158	NM_152290|C1orf158|93190|chromosome 1 open reading frame 158	AK026705|C1orf158|93190|chromosome 1 open reading frame 158	AK298760|C1orf158|93190|chromosome 1 open reading frame 158
hg19_v1_chrX_-_107682600_107682726	0.480254	LHX3,4.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr8_+_66933790_66933848	0.480161	LHX3,4.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v1_chr6_-_167797917_167797997	0.47982	LHX3,4.p2	BC068592|TCP10|6953|t-complex 10 homolog (mouse)	U03399|TCP10|6953|t-complex 10 homolog (mouse)	BC063451|TCP10|6953|t-complex 10 homolog (mouse)	NM_004610|TCP10|6953|t-complex 10 homolog (mouse)
hg19_v1_chr12_-_102872329_102872428	0.479736	LHX3,4.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr10_+_118305427_118305604	0.478497	LHX3,4.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg19_v1_chr12_-_9760481_9760511	0.477725	LHX3,4.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg19_v1_chr3_-_12586962_12586962	0.477328	LHX3,4.p2	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480
hg19_v1_chr1_+_119957553_119957553	0.474248	LHX3,4.p2	NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
hg19_v1_chr20_-_1973451_1973451	0.47343	LHX3,4.p2	AK289618|PDYN|5173|prodynorphin	NM_001190892|PDYN|5173|prodynorphin
hg19_v1_chr17_-_39274587_39274611	0.472962	LHX3,4.p2	BC126131|KRTAP4-11|653240|keratin associated protein 4-11	BC130562|KRTAP4-11|653240|keratin associated protein 4-11	NM_033059|KRTAP4-11|653240|keratin associated protein 4-11	AJ406944|KRTAP4-11|653240|keratin associated protein 4-11
hg19_v1_chr22_-_36236264_36236318	0.468859	LHX3,4.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr6_+_158733691_158733703	0.468416	LHX3,4.p2	AB037818|TULP4|56995|tubby like protein 4	AF219946|TULP4|56995|tubby like protein 4	AF288480|TULP4|56995|tubby like protein 4	BC152476|TULP4|56995|tubby like protein 4	NM_001007466|TULP4|56995|tubby like protein 4	NM_020245|TULP4|56995|tubby like protein 4
hg19_v1_chr16_+_3533475_3533617	0.467882	LHX3,4.p2	AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v1_chr2_+_29038862_29038880	0.466603	LHX3,4.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg19_v1_chr11_+_64051810_64051810	0.465505	LHX3,4.p2	AK300209|GPR137|56834|G protein-coupled receptor 137	NM_001170726|GPR137|56834|G protein-coupled receptor 137
hg19_v1_chr3_-_195310770_195310891	0.464355	LHX3,4.p2	J02611|APOD|347|apolipoprotein D	BC007402|APOD|347|apolipoprotein D	AK312090|APOD|347|apolipoprotein D	AK294523|APOD|347|apolipoprotein D
hg19_v1_chr16_+_86612114_86612114	0.461936	LHX3,4.p2	BC100027|FOXL1|2300|forkhead box L1	NM_005250|FOXL1|2300|forkhead box L1
hg19_v1_chr13_+_109281569_109281570	0.456177	LHX3,4.p2	AB290159|MYO16|23026|myosin XVI	AK127806|MYO16|23026|myosin XVI	NM_001198950|MYO16|23026|myosin XVI
hg19_v1_chr2_+_102508377_102508687	0.455965	LHX3,4.p2	BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr4_-_47983430_47983549	0.455311	LHX3,4.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr2_+_187454724_187454936	0.45374	LHX3,4.p2	AK302550|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AK309711|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_001145000|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_002210|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AB209894|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC126231|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC136442|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC144100|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg19_v1_chr13_-_84456424_84456427	0.452525	LHX3,4.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr4_+_166131170_166131187	0.45072	LHX3,4.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr5_-_156772672_156772728	0.448193	LHX3,4.p2	AK289701|FNDC9|408263|fibronectin type III domain containing 9	BC022570|FNDC9|408263|fibronectin type III domain containing 9	NM_001001343|FNDC9|408263|fibronectin type III domain containing 9
hg19_v1_chr7_+_129984629_129984700	0.446819	LHX3,4.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg19_v1_chr17_-_39623476_39623637	0.446163	LHX3,4.p2	X81419|KRT32|3882|keratin 32	NM_002278|KRT32|3882|keratin 32
hg19_v1_chr16_+_7382750_7382750	0.444836	LHX3,4.p2	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v1_chr6_+_50681256_50681256	0.444801	LHX3,4.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg19_v1_chr13_-_46425756_46425845	0.442923	LHX3,4.p2	BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)	NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)
hg19_v1_chr19_+_3762671_3762677	0.439868	LHX3,4.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg19_v1_chr12_+_54422193_54422305	0.439204	LHX3,4.p2	NM_004503|HOXC6|3223|homeobox C6	S82986|HOXC6|3223|homeobox C6	BC074844|HOXC6|3223|homeobox C6	BC074845|HOXC6|3223|homeobox C6	CR456954|HOXC6|3223|homeobox C6
hg19_v1_chr19_+_48949241_48949278	0.436545	LHX3,4.p2	AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1	BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1	EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1	AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1	BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1	BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr22_-_36236330_36236351	0.436538	LHX3,4.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chrX_-_102942968_102943085	0.434539	LHX3,4.p2	AK302083|MORF4L2|9643|mortality factor 4 like 2	AK056012|MORF4L2|9643|mortality factor 4 like 2	NM_001142419|MORF4L2|9643|mortality factor 4 like 2	NM_001142420|MORF4L2|9643|mortality factor 4 like 2	NM_001142421|MORF4L2|9643|mortality factor 4 like 2	NM_001142422|MORF4L2|9643|mortality factor 4 like 2	NM_001142427|MORF4L2|9643|mortality factor 4 like 2	NM_001142428|MORF4L2|9643|mortality factor 4 like 2	NM_001142431|MORF4L2|9643|mortality factor 4 like 2	NM_001142432|MORF4L2|9643|mortality factor 4 like 2
hg19_v1_chr10_+_15001437_15001437	0.432264	LHX3,4.p2	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)
hg19_v1_chr8_-_132052834_132052834	0.431802	LHX3,4.p2	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)
hg19_v1_chr4_-_46911223_46911251	0.430815	LHX3,4.p2	BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2	BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2	NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2
hg19_v1_chr3_+_238274_238289	0.43032	LHX3,4.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr17_+_19976828_19976976	0.428051	LHX3,4.p2	AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg19_v1_chr17_-_9694613_9694613	0.428018	LHX3,4.p2	BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	NM_001220493|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C
hg19_v1_chr12_+_26348488_26348683	0.426969	LHX3,4.p2	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)	NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)	BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)	DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)	EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)	X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)
hg19_v1_chrX_-_114252132_114252216	0.4228	LHX3,4.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chr4_+_88896899_88896928	0.4224	LHX3,4.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr8_+_134203281_134203379	0.417454	LHX3,4.p2	AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1	AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1	AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1	NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1	NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1	NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1	NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1	AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1	AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1	AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1	AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1	BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1	BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1	AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1
hg19_v1_chr20_-_43729607_43729772	0.416672	LHX3,4.p2	BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v1_chr22_-_36236421_36236629	0.415556	LHX3,4.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr12_-_53600999_53601045	0.415352	LHX3,4.p2	M68892|ITGB7|3695|integrin, beta 7	NM_000889|ITGB7|3695|integrin, beta 7	S80335|ITGB7|3695|integrin, beta 7	AK298239|ITGB7|3695|integrin, beta 7	AK301523|ITGB7|3695|integrin, beta 7	AK311703|ITGB7|3695|integrin, beta 7
hg19_v1_chr17_+_39240412_39240458	0.414966	LHX3,4.p2	NM_033061|KRTAP4-7|100132476|keratin associated protein 4-7
hg19_v1_chr12_-_102874299_102874306	0.414534	LHX3,4.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr9_+_71650643_71650731	0.414532	LHX3,4.p2	BC048097|FXN|2395|frataxin	BC023633|FXN|2395|frataxin
hg19_v1_chr13_+_99058147_99058266	0.412218	LHX3,4.p2	
hg19_v1_chr7_+_91924291_91924419	0.412034	LHX3,4.p2	
hg19_v1_chr2_+_166326156_166326212	0.409329	LHX3,4.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr1_-_92952429_92952472	0.408445	LHX3,4.p2	U67369|GFI1|2672|growth factor independent 1 transcription repressor	NM_005263|GFI1|2672|growth factor independent 1 transcription repressor
hg19_v1_chrX_-_13835313_13835318	0.407321	LHX3,4.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr14_-_107013122_107013458	0.406664	LHX3,4.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr4_-_116034932_116035031	0.406359	LHX3,4.p2	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg19_v1_chr17_+_37784750_37784773	0.405704	LHX3,4.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg19_v1_chr3_-_195310985_195311075	0.403553	LHX3,4.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr12_-_51422012_51422057	0.402991	LHX3,4.p2	BC002592|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	AJ493662|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	NM_001174125|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
hg19_v1_chr10_+_49609641_49609703	0.40257	LHX3,4.p2	BC130570|MAPK8|5599|mitogen-activated protein kinase 8	BC130572|MAPK8|5599|mitogen-activated protein kinase 8	BC144063|MAPK8|5599|mitogen-activated protein kinase 8	L26318|MAPK8|5599|mitogen-activated protein kinase 8	NM_002750|MAPK8|5599|mitogen-activated protein kinase 8	NM_139046|MAPK8|5599|mitogen-activated protein kinase 8	NM_139047|MAPK8|5599|mitogen-activated protein kinase 8	NM_139049|MAPK8|5599|mitogen-activated protein kinase 8	U35004|MAPK8|5599|mitogen-activated protein kinase 8	U35005|MAPK8|5599|mitogen-activated protein kinase 8	U34822|MAPK8|5599|mitogen-activated protein kinase 8	HQ258413|MAPK8|5599|mitogen-activated protein kinase 8	AB451231|MAPK8|5599|mitogen-activated protein kinase 8	AB451271|MAPK8|5599|mitogen-activated protein kinase 8	AB451354|MAPK8|5599|mitogen-activated protein kinase 8	AB451398|MAPK8|5599|mitogen-activated protein kinase 8	DQ234352|MAPK8|5599|mitogen-activated protein kinase 8
hg19_v1_chr10_-_94003002_94003037	0.395698	LHX3,4.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg19_v1_chr12_-_53601051_53601093	0.395071	LHX3,4.p2	AK300960|ITGB7|3695|integrin, beta 7
hg19_v1_chr5_-_119740531_119740569	0.395063	LHX3,4.p2	
hg19_v1_chr3_-_9291251_9291385	0.394574	LHX3,4.p2	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg19_v1_chr13_-_34250899_34250972	0.393186	LHX3,4.p2	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr13_-_60325073_60325215	0.391583	LHX3,4.p2	
hg19_v1_chr4_+_88754120_88754139	0.391545	LHX3,4.p2	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein	AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein	BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein	AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chr12_-_23737507_23737545	0.385772	LHX3,4.p2	NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5	AK098610|SOX5|6660|SRY (sex determining region Y)-box 5	AK223536|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr14_+_92788924_92788924	0.385625	LHX3,4.p2	AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg19_v1_chr2_-_288181_288307	0.38507	LHX3,4.p2	BC033490|FAM150B|285016|family with sequence similarity 150, member B	NM_001002919|FAM150B|285016|family with sequence similarity 150, member B
hg19_v1_chr21_-_36231794_36231878	0.384562	LHX3,4.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr14_+_29241989_29242002	0.38427	LHX3,4.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg19_v1_chr1_-_152131703_152131703	0.379906	LHX3,4.p2	AY396742|RPTN|126638|repetin	NM_001122965|RPTN|126638|repetin
hg19_v1_chr1_+_198608244_198608417	0.379554	LHX3,4.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr9_-_215892_215892	0.377724	LHX3,4.p2	NM_152569|C9orf66|157983|chromosome 9 open reading frame 66
hg19_v1_chr9_-_32526164_32526340	0.376673	LHX3,4.p2	AK301678|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK315040|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BX647917|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC070029|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC132786|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC136610|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AF038963|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	NM_014314|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC107731|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
hg19_v1_chr1_-_93342706_93342706	0.376631	LHX3,4.p2	NM_001252271|FAM69A|388650|family with sequence similarity 69, member A
hg19_v1_chr19_+_3762650_3762670	0.376002	LHX3,4.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg19_v1_chr19_-_50413063_50413142	0.375055	LHX3,4.p2	CR541721|NUP62|23636|nucleoporin 62kDa	AM393785|NUP62|23636|nucleoporin 62kDa	DQ892591|NUP62|23636|nucleoporin 62kDa	DQ896857|NUP62|23636|nucleoporin 62kDa	BC014842|NUP62|23636|nucleoporin 62kDa
hg19_v1_chrX_-_68385249_68385364	0.374162	LHX3,4.p2	AK290543|PJA1|64219|praja ring finger 1	AK226171|PJA1|64219|praja ring finger 1	BC075803|PJA1|64219|praja ring finger 1	AF264620|PJA1|64219|praja ring finger 1	AK293266|PJA1|64219|praja ring finger 1	AK294632|PJA1|64219|praja ring finger 1	AK096611|PJA1|64219|praja ring finger 1	NM_001032396|PJA1|64219|praja ring finger 1	NM_022368|PJA1|64219|praja ring finger 1	NM_145119|PJA1|64219|praja ring finger 1
hg19_v1_chr6_+_25754926_25754973	0.371934	LHX3,4.p2	AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4
hg19_v1_chr9_-_112191105_112191322	0.368371	LHX3,4.p2	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3
hg19_v1_chr5_+_132209354_132209359	0.367641	LHX3,4.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg19_v1_chr3_-_194188967_194188967	0.366724	LHX3,4.p2	NM_024524|ATP13A3|79572|ATPase type 13A3
hg19_v1_chr17_-_10452939_10453016	0.364109	LHX3,4.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg19_v1_chr6_+_34204928_34204935	0.360131	LHX3,4.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr4_+_169552752_169552840	0.359904	LHX3,4.p2	NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein	AK095512|PALLD|23022|palladin, cytoskeletal associated protein
hg19_v1_chr4_+_169013687_169013851	0.358799	LHX3,4.p2	NM_007193|ANXA10|11199|annexin A10	BC007320|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg19_v1_chr5_-_10761179_10761340	0.35555	LHX3,4.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg19_v1_chr8_+_123793988_123794000	0.353803	LHX3,4.p2	BC042145|ZHX2|22882|zinc fingers and homeoboxes 2
hg19_v1_chr2_+_167744996_167744997	0.35316	LHX3,4.p2	EF119718|XIRP2|129446|xin actin-binding repeat containing 2	EF119719|XIRP2|129446|xin actin-binding repeat containing 2	EF119720|XIRP2|129446|xin actin-binding repeat containing 2	EF119721|XIRP2|129446|xin actin-binding repeat containing 2	EF119722|XIRP2|129446|xin actin-binding repeat containing 2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2	AK097519|XIRP2|129446|xin actin-binding repeat containing 2
hg19_v1_chr6_-_13295817_13295817	0.35283	LHX3,4.p2	AK091836|LOC100130357|100130357|uncharacterized LOC100130357	NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357
hg19_v1_chr8_-_108510094_108510282	0.351795	LHX3,4.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr8_+_98703361_98703396	0.351632	LHX3,4.p2	AK308030|MTDH|92140|metadherin
hg19_v1_chr13_-_84456473_84456527	0.351357	LHX3,4.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr2_+_166095911_166095954	0.35062	LHX3,4.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chrX_-_138724851_138724999	0.348918	LHX3,4.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg19_v1_chr4_+_78432905_78432906	0.348008	LHX3,4.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg19_v1_chr6_-_31088195_31088251	0.347646	LHX3,4.p2	DQ891583|CDSN|1041|corneodesmosin	DQ894777|CDSN|1041|corneodesmosin	BC031993|CDSN|1041|corneodesmosin	AF030130|CDSN|1041|corneodesmosin	L20815|CDSN|1041|corneodesmosin	AK292636|CDSN|1041|corneodesmosin	NM_001264|CDSN|1041|corneodesmosin
hg19_v1_chr3_+_119316694_119316760	0.34728	LHX3,4.p2	NM_001206960|PLA1A|51365|phospholipase A1 member A	NM_001206961|PLA1A|51365|phospholipase A1 member A	NM_015900|PLA1A|51365|phospholipase A1 member A	AK301880|PLA1A|51365|phospholipase A1 member A	AK222705|PLA1A|51365|phospholipase A1 member A	AK313519|PLA1A|51365|phospholipase A1 member A	BC035347|PLA1A|51365|phospholipase A1 member A	BC047703|PLA1A|51365|phospholipase A1 member A	U37591|PLA1A|51365|phospholipase A1 member A	AF035268|PLA1A|51365|phospholipase A1 member A	AF035269|PLA1A|51365|phospholipase A1 member A
hg19_v1_chr4_-_155511838_155511898	0.343484	LHX3,4.p2	BC098280|FGA|2243|fibrinogen alpha chain	BC099706|FGA|2243|fibrinogen alpha chain	BC099720|FGA|2243|fibrinogen alpha chain	BC101935|FGA|2243|fibrinogen alpha chain	J00127|FGA|2243|fibrinogen alpha chain	AK290559|FGA|2243|fibrinogen alpha chain	J00128|FGA|2243|fibrinogen alpha chain	BC020764|FGA|2243|fibrinogen alpha chain	BC070246|FGA|2243|fibrinogen alpha chain	BC105803|FGA|2243|fibrinogen alpha chain	NM_000508|FGA|2243|fibrinogen alpha chain	NM_021871|FGA|2243|fibrinogen alpha chain
hg19_v1_chr4_-_65275000_65275193	0.341376	LHX3,4.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg19_v1_chr11_+_131780537_131780711	0.339102	LHX3,4.p2	NM_001144058|NTM|50863|neurotrimin	NM_001144059|NTM|50863|neurotrimin	NM_016522|NTM|50863|neurotrimin
hg19_v1_chr6_+_42989374_42989401	0.338164	LHX3,4.p2	AK313816|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC006293|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC011933|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	NM_033112|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)
hg19_v1_chr7_+_107110501_107110504	0.337455	LHX3,4.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chr6_+_29555682_29555721	0.336025	LHX3,4.p2	BC101683|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC112176|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	NM_007160|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	EU446925|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC069146|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2
hg19_v1_chr4_+_71248794_71248859	0.335432	LHX3,4.p2	NM_006685|SMR3B|10879|submaxillary gland androgen regulated protein 3B	BC094707|SMR3B|10879|submaxillary gland androgen regulated protein 3B	D29833|SMR3B|10879|submaxillary gland androgen regulated protein 3B	BC015327|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg19_v1_chr12_-_16758312_16758338	0.334513	LHX3,4.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chrX_+_115301957_115302033	0.333568	LHX3,4.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg19_v1_chr1_-_114414245_114414374	0.333477	LHX3,4.p2	JN084012|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg19_v1_chr6_-_22297729_22297729	0.329846	LHX3,4.p2	BC015850|PRL|5617|prolactin	NM_000948|PRL|5617|prolactin
hg19_v1_chr6_-_66417069_66417117	0.329769	LHX3,4.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	AB593112|EYS|346007|eyes shut homolog (Drosophila)	AB593114|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg19_v1_chr2_+_234826042_234826049	0.328504	LHX3,4.p2	AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8
hg19_v1_chr4_-_176733901_176733911	0.325586	LHX3,4.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg19_v1_chr3_+_186739643_186739702	0.325565	LHX3,4.p2	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr11_+_99426872_99426875	0.323776	LHX3,4.p2	AB013802|CNTN5|53942|contactin 5	AB013803|CNTN5|53942|contactin 5	NM_175566|CNTN5|53942|contactin 5
hg19_v1_chr17_+_78356710_78356831	0.32073	LHX3,4.p2	AK023871|RNF213|57674|ring finger protein 213
hg19_v1_chr8_+_36641841_36641900	0.320405	LHX3,4.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg19_v1_chr13_-_99910548_99910681	0.318235	LHX3,4.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg19_v1_chr2_-_172967627_172967632	0.315177	LHX3,4.p2	AK291367|DLX2|1746|distal-less homeobox 2	AK316129|DLX2|1746|distal-less homeobox 2
hg19_v1_chr6_+_152011630_152011756	0.310667	LHX3,4.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1	AB588629|ESR1|2099|estrogen receptor 1	AB588630|ESR1|2099|estrogen receptor 1
hg19_v1_chr1_-_20250051_20250109	0.310191	LHX3,4.p2	AF189279|PLA2G2E|30814|phospholipase A2, group IIE	BC069116|PLA2G2E|30814|phospholipase A2, group IIE	NM_014589|PLA2G2E|30814|phospholipase A2, group IIE
hg19_v1_chr12_-_10151689_10151898	0.308467	LHX3,4.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg19_v1_chr11_-_58343308_58343389	0.308398	LHX3,4.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg19_v1_chr6_+_29855349_29855474	0.307323	LHX3,4.p2	AK299998|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK090500|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK308374|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)
hg19_v1_chr6_+_34206567_34206567	0.306862	LHX3,4.p2	BC015789|HMGA1|3159|high mobility group AT-hook 1	NM_145905|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr4_-_176733413_176733470	0.305617	LHX3,4.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg19_v1_chr13_-_47470967_47471168	0.299526	LHX3,4.p2	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A
hg19_v1_chr5_+_126984712_126984735	0.29889	LHX3,4.p2	NM_001048252|CTXN3|613212|cortexin 3	AB219764|CTXN3|613212|cortexin 3
hg19_v1_chr4_-_57547845_57547871	0.298628	LHX3,4.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chr2_+_234216308_234216308	0.298527	LHX3,4.p2	NM_000541|SAG|6295|S-antigen; retina and pineal gland (arrestin)
hg19_v1_chr20_+_62795773_62795807	0.297978	LHX3,4.p2	BC018917|MYT1|4661|myelin transcription factor 1
hg19_v1_chr15_-_56209305_56209328	0.297033	LHX3,4.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg19_v1_chr21_-_19775958_19775972	0.295557	LHX3,4.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr2_+_183608329_183608371	0.2927	LHX3,4.p2	AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr12_-_102874373_102874391	0.291878	LHX3,4.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr21_+_33664123_33664123	0.285335	LHX3,4.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg19_v1_chr4_+_71457974_71458039	0.284933	LHX3,4.p2	NM_016519|AMBN|258|ameloblastin (enamel matrix protein)	AF209780|AMBN|258|ameloblastin (enamel matrix protein)	AF263464|AMBN|258|ameloblastin (enamel matrix protein)	AJ537437|AMBN|258|ameloblastin (enamel matrix protein)	AF219994|AMBN|258|ameloblastin (enamel matrix protein)	AK314918|AMBN|258|ameloblastin (enamel matrix protein)	BC106931|AMBN|258|ameloblastin (enamel matrix protein)	BC106932|AMBN|258|ameloblastin (enamel matrix protein)
hg19_v1_chr1_-_7913094_7913103	0.284822	LHX3,4.p2	AF104118|UTS2|10911|urotensin 2	AY358375|UTS2|10911|urotensin 2	NM_006786|UTS2|10911|urotensin 2
hg19_v1_chr2_+_185463235_185463252	0.283938	LHX3,4.p2	BC150198|ZNF804A|91752|zinc finger protein 804A	AK131402|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr3_-_99833348_99833356	0.283919	LHX3,4.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr3_-_133648517_133648655	0.281902	LHX3,4.p2	AK025826|C3orf36|80111|chromosome 3 open reading frame 36	AK225383|C3orf36|80111|chromosome 3 open reading frame 36	BC051274|C3orf36|80111|chromosome 3 open reading frame 36	BC064502|C3orf36|80111|chromosome 3 open reading frame 36	BC082257|C3orf36|80111|chromosome 3 open reading frame 36	NM_025041|C3orf36|80111|chromosome 3 open reading frame 36
hg19_v1_chr5_+_140792507_140792742	0.281565	LHX3,4.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chr2_+_185463092_185463153	0.280197	LHX3,4.p2	AY327407|ZNF804A|91752|zinc finger protein 804A	NM_194250|ZNF804A|91752|zinc finger protein 804A	AK307596|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr8_+_105352050_105352055	0.279312	LHX3,4.p2	AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4	AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4	AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4	BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4	NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4
hg19_v1_chr11_+_71900601_71900781	0.27886	LHX3,4.p2	J05013|FOLR1|2348|folate receptor 1 (adult)	NM_016724|FOLR1|2348|folate receptor 1 (adult)	NM_016725|FOLR1|2348|folate receptor 1 (adult)	BC002947|FOLR1|2348|folate receptor 1 (adult)	AK223527|FOLR1|2348|folate receptor 1 (adult)	M28099|FOLR1|2348|folate receptor 1 (adult)
hg19_v1_chr5_-_41213513_41213666	0.275069	LHX3,4.p2	J05024|C6|729|complement component 6	J04506|C6|729|complement component 6	AK292509|C6|729|complement component 6	J05064|C6|729|complement component 6	AK313673|C6|729|complement component 6	NM_000065|C6|729|complement component 6
hg19_v1_chr13_-_103719195_103719195	0.273536	LHX3,4.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg19_v1_chr7_-_112727832_112727848	0.272665	LHX3,4.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr18_+_32173281_32173328	0.271423	LHX3,4.p2	NM_001128175|DTNA|1837|dystrobrevin, alpha	NM_001198938|DTNA|1837|dystrobrevin, alpha	NM_001198939|DTNA|1837|dystrobrevin, alpha	NM_001198940|DTNA|1837|dystrobrevin, alpha	AK308410|DTNA|1837|dystrobrevin, alpha	AL833285|DTNA|1837|dystrobrevin, alpha	BC005300|DTNA|1837|dystrobrevin, alpha	AB209102|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr20_+_23345020_23345020	0.269806	LHX3,4.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg19_v1_chr12_-_91505215_91505293	0.269574	LHX3,4.p2	BC035997|LUM|4060|lumican	AK223177|LUM|4060|lumican	U18728|LUM|4060|lumican	U21128|LUM|4060|lumican	AK312682|LUM|4060|lumican	BC007038|LUM|4060|lumican
hg19_v1_chr17_+_3118911_3118914	0.266218	LHX3,4.p2	BC069169|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC128248|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141934|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141935|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	NM_014565|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1
hg19_v1_chr4_+_88896801_88896819	0.266092	LHX3,4.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr4_-_170077807_170077832	0.265859	LHX3,4.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr14_-_35344852_35344852	0.265267	LHX3,4.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr7_+_114055171_114055213	0.263371	LHX3,4.p2	AK296957|FOXP2|93986|forkhead box P2
hg19_v1_chr8_-_37727937_37727964	0.262135	LHX3,4.p2	AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)
hg19_v1_chr2_+_182850550_182850748	0.261445	LHX3,4.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v1_chr11_-_58611979_58611998	0.261141	LHX3,4.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg19_v1_chr3_+_148447966_148447966	0.258086	LHX3,4.p2	NM_032049|AGTR1|185|angiotensin II receptor, type 1
hg19_v1_chrX_-_115594136_115594163	0.257654	LHX3,4.p2	BC062223|CXorf61|203413|chromosome X open reading frame 61	NM_001017978|CXorf61|203413|chromosome X open reading frame 61	AK000618|CXorf61|203413|chromosome X open reading frame 61	AK026566|CXorf61|203413|chromosome X open reading frame 61
hg19_v1_chr12_+_81101407_81101498	0.257441	LHX3,4.p2	NM_002469|MYF6|4618|myogenic factor 6 (herculin)	AK313287|MYF6|4618|myogenic factor 6 (herculin)	X52011|MYF6|4618|myogenic factor 6 (herculin)	BC017834|MYF6|4618|myogenic factor 6 (herculin)	DQ893248|MYF6|4618|myogenic factor 6 (herculin)	DQ896577|MYF6|4618|myogenic factor 6 (herculin)	CR407641|MYF6|4618|myogenic factor 6 (herculin)	CR541763|MYF6|4618|myogenic factor 6 (herculin)
hg19_v1_chr3_-_190167597_190167664	0.257235	LHX3,4.p2	BC071780|TMEM207|131920|transmembrane protein 207	AY358607|TMEM207|131920|transmembrane protein 207	NM_207316|TMEM207|131920|transmembrane protein 207
hg19_v1_chr2_-_213403280_213403351	0.25398	LHX3,4.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg19_v1_chr15_+_81489218_81489219	0.252738	LHX3,4.p2	AK124725|IL16|3603|interleukin 16	NM_001172128|IL16|3603|interleukin 16	AK124565|IL16|3603|interleukin 16	AK131530|IL16|3603|interleukin 16
hg19_v1_chrX_-_13835187_13835203	0.252551	LHX3,4.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chrX_+_85517970_85517970	0.25153	LHX3,4.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg19_v1_chr11_-_128737132_128737267	0.251429	LHX3,4.p2	U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v1_chr22_-_40289793_40289793	0.250369	LHX3,4.p2	BC033895|ENTHD1|150350|ENTH domain containing 1	NM_152512|ENTHD1|150350|ENTH domain containing 1
hg19_v1_chr5_+_140729723_140729827	0.250312	LHX3,4.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr9_-_4666665_4666673	0.250027	LHX3,4.p2	AK295831|C9orf68|55064|chromosome 9 open reading frame 68	NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68
hg19_v1_chrX_+_108779009_108779020	0.248554	LHX3,4.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr20_+_43990576_43990576	0.248263	LHX3,4.p2	NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v1_chr16_+_4902076_4902215	0.24566	LHX3,4.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr3_+_50273645_50273646	0.244269	LHX3,4.p2	NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg19_v1_chr17_-_7218370_7218664	0.243949	LHX3,4.p2	BT006998|GPS2|2874|G protein pathway suppressor 2	CR541723|GPS2|2874|G protein pathway suppressor 2	CR541750|GPS2|2874|G protein pathway suppressor 2	BC014192|GPS2|2874|G protein pathway suppressor 2	BC013652|GPS2|2874|G protein pathway suppressor 2	NM_004489|GPS2|2874|G protein pathway suppressor 2
hg19_v1_chr1_+_202509241_202509320	0.243687	LHX3,4.p2	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B	NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B
hg19_v1_chr8_+_107738239_107738471	0.24353	LHX3,4.p2	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg19_v1_chr11_+_59824054_59824119	0.240549	LHX3,4.p2	NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v1_chr3_+_50273648_50273673	0.239334	LHX3,4.p2	BC014627|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	X04828|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg19_v1_chr2_+_228356287_228356295	0.239165	LHX3,4.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr4_-_46125929_46126097	0.237259	LHX3,4.p2	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg19_v1_chr3_-_69171536_69171745	0.23725	LHX3,4.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg19_v1_chr6_+_158438079_158438266	0.236583	LHX3,4.p2	NM_001178088|SYNJ2|8871|synaptojanin 2	BX648749|SYNJ2|8871|synaptojanin 2	AB002346|SYNJ2|8871|synaptojanin 2	AF039945|SYNJ2|8871|synaptojanin 2
hg19_v1_chr7_-_87342569_87342726	0.235314	LHX3,4.p2	AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v1_chr8_+_144731829_144732042	0.235133	LHX3,4.p2	AB014528|ZNF623|9831|zinc finger protein 623	BC067516|ZNF623|9831|zinc finger protein 623	BC067517|ZNF623|9831|zinc finger protein 623	BC067518|ZNF623|9831|zinc finger protein 623	NM_014789|ZNF623|9831|zinc finger protein 623	BC075056|ZNF623|9831|zinc finger protein 623	BC075057|ZNF623|9831|zinc finger protein 623	EU446754|ZNF623|9831|zinc finger protein 623
hg19_v1_chr1_+_87012758_87012925	0.234512	LHX3,4.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	HQ258531|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg19_v1_chr15_+_93443559_93443602	0.232585	LHX3,4.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr15_-_33360084_33360387	0.23256	LHX3,4.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr1_-_153283166_153283193	0.229582	LHX3,4.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg19_v1_chr4_+_62362838_62362838	0.229554	LHX3,4.p2	NM_015236|LPHN3|23284|latrophilin 3
hg19_v1_chr8_-_20040612_20040716	0.228906	LHX3,4.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg19_v1_chr14_-_69262959_69263010	0.228606	LHX3,4.p2	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr12_-_24102563_24102641	0.228166	LHX3,4.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr17_+_12569206_12569213	0.228071	LHX3,4.p2	NM_001146312|MYOCD|93649|myocardin	NM_153604|MYOCD|93649|myocardin	AY764180|MYOCD|93649|myocardin
hg19_v1_chr13_-_110802708_110802763	0.226927	LHX3,4.p2	M10941|COL4A1|1282|collagen, type IV, alpha 1	X03963|COL4A1|1282|collagen, type IV, alpha 1
hg19_v1_chr12_+_15125955_15125977	0.226413	LHX3,4.p2	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma
hg19_v1_chr6_-_74161824_74161939	0.226394	LHX3,4.p2	HQ258303|MB21D1|115004|Mab-21 domain containing 1
hg19_v1_chr10_-_47173917_47174122	0.225307	LHX3,4.p2	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	AK296573|ANXA8|653145|annexin A8	AK300139|ANXA8|653145|annexin A8	AK300158|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	Z36830|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	AK298761|ANXA8|653145|annexin A8
hg19_v1_chr12_-_52946734_52946930	0.224953	LHX3,4.p2	AJ308601|KRT71|112802|keratin 71	EU832765|KRT71|112802|keratin 71	GQ129308|KRT71|112802|keratin 71	AJ308600|KRT71|112802|keratin 71	BC103917|KRT71|112802|keratin 71	BC103918|KRT71|112802|keratin 71	AJ308599|KRT71|112802|keratin 71	AK122795|KRT71|112802|keratin 71	NM_033448|KRT71|112802|keratin 71
hg19_v1_chr7_-_112726143_112726848	0.224281	LHX3,4.p2	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr5_+_132009372_132009372	0.22069	LHX3,4.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg19_v1_chr7_-_44580857_44580913	0.220176	LHX3,4.p2	AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1
hg19_v1_chr12_+_50156977_50157080	0.219901	LHX3,4.p2	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg19_v1_chr6_+_31583766_31583888	0.219836	LHX3,4.p2	NM_032955|AIF1|199|allograft inflammatory factor 1	EF070982|AIF1|199|allograft inflammatory factor 1	AF299327|AIF1|199|allograft inflammatory factor 1	CR542153|AIF1|199|allograft inflammatory factor 1
hg19_v1_chr12_-_102874321_102874323	0.21972	LHX3,4.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr8_+_104831415_104831735	0.219039	LHX3,4.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chr1_+_196857143_196857232	0.218593	LHX3,4.p2	AK292752|CFHR4|10877|complement factor H-related 4	NM_001201550|CFHR4|10877|complement factor H-related 4	NM_001201551|CFHR4|10877|complement factor H-related 4	NM_006684|CFHR4|10877|complement factor H-related 4	X98337|CFHR4|10877|complement factor H-related 4	AJ640130|CFHR4|10877|complement factor H-related 4	BC074957|CFHR4|10877|complement factor H-related 4
hg19_v1_chrM_+_10704_11421	0.218286	LHX3,4.p2	
hg19_v1_chr13_-_24007822_24007859	0.218067	LHX3,4.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr15_+_74421986_74421999	0.216809	LHX3,4.p2	NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg19_v1_chr19_-_55767103_55767150	0.214404	LHX3,4.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr6_+_43738394_43738674	0.213897	LHX3,4.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr5_+_140235594_140235633	0.213446	LHX3,4.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chr3_+_151451703_151451714	0.213336	LHX3,4.p2	BX647585|AADACL2|344752|arylacetamide deacetylase-like 2	NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2	BC065724|AADACL2|344752|arylacetamide deacetylase-like 2
hg19_v1_chr1_+_151630710_151630762	0.212153	LHX3,4.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg19_v1_chr12_-_91576805_91576805	0.211459	LHX3,4.p2	NM_001920|DCN|1634|decorin
hg19_v1_chr14_-_95236351_95236498	0.210825	LHX3,4.p2	BC063580|GSC|145258|goosecoid homeobox	AY177407|GSC|145258|goosecoid homeobox	NM_173849|GSC|145258|goosecoid homeobox
hg19_v1_chr6_-_53013581_53013626	0.210197	LHX3,4.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg19_v1_chr7_-_112727799_112727815	0.209896	LHX3,4.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr4_+_95128750_95128872	0.209815	LHX3,4.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr8_-_110986923_110987009	0.207427	LHX3,4.p2	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1	AK313469|KCNV1|27012|potassium channel, subfamily V, member 1	AF167082|KCNV1|27012|potassium channel, subfamily V, member 1	NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1	AK297393|KCNV1|27012|potassium channel, subfamily V, member 1
hg19_v1_chr6_-_49604524_49604586	0.206988	LHX3,4.p2	AF031548|RHAG|6005|Rh-associated glycoprotein	DQ892782|RHAG|6005|Rh-associated glycoprotein	DQ896030|RHAG|6005|Rh-associated glycoprotein	AF031549|RHAG|6005|Rh-associated glycoprotein	AF178841|RHAG|6005|Rh-associated glycoprotein	AF179682|RHAG|6005|Rh-associated glycoprotein	AF179684|RHAG|6005|Rh-associated glycoprotein	AF179685|RHAG|6005|Rh-associated glycoprotein	AF187847|RHAG|6005|Rh-associated glycoprotein	BC012605|RHAG|6005|Rh-associated glycoprotein	X64594|RHAG|6005|Rh-associated glycoprotein	AK313505|RHAG|6005|Rh-associated glycoprotein	NM_000324|RHAG|6005|Rh-associated glycoprotein
hg19_v1_chr4_+_70894129_70894175	0.206845	LHX3,4.p2	NM_000200|HTN3|3347|histatin 3	BC009791|HTN3|3347|histatin 3	BC095438|HTN3|3347|histatin 3	M26665|HTN3|3347|histatin 3
hg19_v1_chr3_-_170744767_170744767	0.206778	LHX3,4.p2	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v1_chr8_+_32785485_32785494	0.206215	LHX3,4.p2	
hg19_v1_chr2_+_207406815_207406857	0.206051	LHX3,4.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr3_+_173116243_173116243	0.203052	LHX3,4.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr1_-_247054277_247054314	0.202986	LHX3,4.p2	AL833491|AHCTF1|25909|AT hook containing transcription factor 1
hg19_v1_chr19_+_48758931_48758967	0.20185	LHX3,4.p2	AK125548|LOC100505812|100505812|uncharacterized LOC100505812	BC060888|LOC100505812|100505812|uncharacterized LOC100505812
hg19_v1_chr2_-_152830448_152830484	0.201519	LHX3,4.p2	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr3_+_178254223_178254223	0.201214	LHX3,4.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chrX_+_11311532_11311553	0.20114	LHX3,4.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg19_v1_chr11_+_59824129_59824170	0.201046	LHX3,4.p2	L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v1_chr11_-_83984230_83984322	0.200028	LHX3,4.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr3_+_46619075_46619459	0.199474	LHX3,4.p2	NM_003212|TDGF1|6997|teratocarcinoma-derived growth factor 1	X14253|TDGF1|6997|teratocarcinoma-derived growth factor 1	BC022393|TDGF1|6997|teratocarcinoma-derived growth factor 1	BC067844|TDGF1|6997|teratocarcinoma-derived growth factor 1	AK313319|TDGF1|6997|teratocarcinoma-derived growth factor 1	EU832709|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg19_v1_chr6_+_158734902_158734937	0.198182	LHX3,4.p2	
hg19_v1_chr19_+_48949029_48949106	0.197881	LHX3,4.p2	NM_031485|GRWD1|83743|glutamate-rich WD repeat containing 1	AK074676|GRWD1|83743|glutamate-rich WD repeat containing 1	AK300225|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr1_+_192127591_192127616	0.196499	LHX3,4.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr14_-_57960432_57960575	0.19618	LHX3,4.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr3_+_50273674_50273697	0.196021	LHX3,4.p2	J03004|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg19_v1_chr3_+_50273575_50273632	0.195357	LHX3,4.p2	BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg19_v1_chr5_-_35938736_35938880	0.195133	LHX3,4.p2	NM_001042625|CAPSL|133690|calcyphosine-like	BC017586|CAPSL|133690|calcyphosine-like	NM_144647|CAPSL|133690|calcyphosine-like
hg19_v1_chr12_-_51740422_51740462	0.193318	LHX3,4.p2	BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1	AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1	BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1	NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1
hg19_v1_chr13_-_45775174_45775174	0.192677	LHX3,4.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg19_v1_chr7_+_114055234_114055377	0.192616	LHX3,4.p2	AF493430|FOXP2|93986|forkhead box P2	AF337817|FOXP2|93986|forkhead box P2	AF467257|FOXP2|93986|forkhead box P2	BC126104|FOXP2|93986|forkhead box P2	BC143866|FOXP2|93986|forkhead box P2	BC143867|FOXP2|93986|forkhead box P2
hg19_v1_chr7_-_112727778_112727783	0.192232	LHX3,4.p2	BC030577|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr1_+_211556158_211556178	0.192036	LHX3,4.p2	BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467
hg19_v1_chr19_+_46498338_46498338	0.191027	LHX3,4.p2	NM_001080402|CCDC61|729440|coiled-coil domain containing 61
hg19_v1_chr2_-_134326030_134326047	0.190424	LHX3,4.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr10_-_52645430_52645440	0.19029	LHX3,4.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr8_+_7353367_7353467	0.189802	LHX3,4.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg19_v1_chr19_+_30433111_30433453	0.18943	LHX3,4.p2	NM_003796|URI1|8725|URI1, prefoldin-like chaperone	AK226173|URI1|8725|URI1, prefoldin-like chaperone	AF091095|URI1|8725|URI1, prefoldin-like chaperone	AK292170|URI1|8725|URI1, prefoldin-like chaperone	BC067259|URI1|8725|URI1, prefoldin-like chaperone	AK314313|URI1|8725|URI1, prefoldin-like chaperone	AK001437|URI1|8725|URI1, prefoldin-like chaperone	NM_134447|URI1|8725|URI1, prefoldin-like chaperone
hg19_v1_chr14_+_103851769_103851772	0.189306	LHX3,4.p2	BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr16_-_30934437_30934589	0.189289	LHX3,4.p2	BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)
hg19_v1_chrX_+_37026431_37026431	0.188417	LHX3,4.p2	NM_001013736|FAM47C|442444|family with sequence similarity 47, member C
hg19_v1_chr2_-_190044330_190044604	0.188016	LHX3,4.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	M31365|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg19_v1_chr12_-_7596722_7596752	0.187632	LHX3,4.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg19_v1_chr1_+_117544371_117544439	0.187562	LHX3,4.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg19_v1_chr20_-_13971256_13971261	0.187544	LHX3,4.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v1_chr8_-_59412695_59412719	0.187223	LHX3,4.p2	X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1
hg19_v1_chr9_-_117265452_117265494	0.185191	LHX3,4.p2	AL110228|DFNB31|25861|deafness, autosomal recessive 31	NM_001083885|DFNB31|25861|deafness, autosomal recessive 31
hg19_v1_chr1_+_167691156_167691500	0.184749	LHX3,4.p2	NM_001146191|MPZL1|9019|myelin protein zero-like 1	NM_003953|MPZL1|9019|myelin protein zero-like 1	NM_024569|MPZL1|9019|myelin protein zero-like 1	AK297112|MPZL1|9019|myelin protein zero-like 1	AK075334|MPZL1|9019|myelin protein zero-like 1	AK307250|MPZL1|9019|myelin protein zero-like 1	AK291249|MPZL1|9019|myelin protein zero-like 1	AY359019|MPZL1|9019|myelin protein zero-like 1	AF181660|MPZL1|9019|myelin protein zero-like 1	AF478447|MPZL1|9019|myelin protein zero-like 1	BC000984|MPZL1|9019|myelin protein zero-like 1	BC007881|MPZL1|9019|myelin protein zero-like 1	AF095727|MPZL1|9019|myelin protein zero-like 1	AF087020|MPZL1|9019|myelin protein zero-like 1	AF092425|MPZL1|9019|myelin protein zero-like 1	AF095726|MPZL1|9019|myelin protein zero-like 1	AK315546|MPZL1|9019|myelin protein zero-like 1	AF239756|MPZL1|9019|myelin protein zero-like 1	BT019542|MPZL1|9019|myelin protein zero-like 1	CR542160|MPZL1|9019|myelin protein zero-like 1	HQ447352|MPZL1|9019|myelin protein zero-like 1
hg19_v1_chr8_-_52721903_52722004	0.184482	LHX3,4.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg19_v1_chr1_-_39347258_39347297	0.184037	LHX3,4.p2	AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa	BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa
hg19_v1_chr2_+_5832778_5832852	0.183373	LHX3,4.p2	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg19_v1_chr12_-_91576579_91576582	0.182919	LHX3,4.p2	AL355731|DCN|1634|decorin
hg19_v1_chr3_+_50273635_50273640	0.182608	LHX3,4.p2	AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg19_v1_chr3_-_42307661_42307661	0.179449	LHX3,4.p2	BC111026|CCK|885|cholecystokinin	NM_000729|CCK|885|cholecystokinin
hg19_v1_chr20_+_17674319_17674319	0.178878	LHX3,4.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg19_v1_chrM_+_11427_11608	0.177683	LHX3,4.p2	
hg19_v1_chr1_-_232651227_232651311	0.177661	LHX3,4.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr4_+_74301932_74301978	0.177604	LHX3,4.p2	NM_001134|AFP|174|alpha-fetoprotein	V01514|AFP|174|alpha-fetoprotein	AK297669|AFP|174|alpha-fetoprotein	AK297674|AFP|174|alpha-fetoprotein	AK314817|AFP|174|alpha-fetoprotein	BC027881|AFP|174|alpha-fetoprotein	DQ890942|AFP|174|alpha-fetoprotein	DQ894103|AFP|174|alpha-fetoprotein
hg19_v1_chr4_+_72204769_72204965	0.177154	LHX3,4.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chrM_+_5513_5584	0.176665	LHX3,4.p2	
hg19_v1_chr6_+_29079586_29079667	0.176552	LHX3,4.p2	BC136973|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3	BC136975|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3	NM_001005216|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3
hg19_v1_chr17_-_39092714_39093086	0.17624	LHX3,4.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr4_+_3315873_3315873	0.173739	LHX3,4.p2	AF030111|RGS12|6002|regulator of G-protein signaling 12	NM_002926|RGS12|6002|regulator of G-protein signaling 12	NM_198229|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr21_+_19617145_19617179	0.173651	LHX3,4.p2	AF257472|CHODL|140578|chondrolectin	NM_024944|CHODL|140578|chondrolectin	AY358608|CHODL|140578|chondrolectin	BC009418|CHODL|140578|chondrolectin
hg19_v1_chr5_-_141993691_141993725	0.172365	LHX3,4.p2	S67291|FGF1|2246|fibroblast growth factor 1 (acidic)	S67292|FGF1|2246|fibroblast growth factor 1 (acidic)	S67294|FGF1|2246|fibroblast growth factor 1 (acidic)	X65778|FGF1|2246|fibroblast growth factor 1 (acidic)	X65779|FGF1|2246|fibroblast growth factor 1 (acidic)	M13361|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)	X51943|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr12_-_58135853_58135943	0.171765	LHX3,4.p2	AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg19_v1_chr7_+_148287656_148287656	0.17169	LHX3,4.p2	BC021251|C7orf33|202865|chromosome 7 open reading frame 33	NM_145304|C7orf33|202865|chromosome 7 open reading frame 33
hg19_v1_chr21_-_43346780_43346798	0.171447	LHX3,4.p2	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2	AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2
hg19_v1_chr20_+_45523523_45523581	0.169113	LHX3,4.p2	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)	AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)
hg19_v1_chr11_-_16497917_16497934	0.168956	LHX3,4.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr7_-_14880954_14881074	0.168197	LHX3,4.p2	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa
hg19_v1_chrX_+_41548225_41548310	0.168027	LHX3,4.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg19_v1_chr20_+_45523505_45523511	0.167898	LHX3,4.p2	BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)
hg19_v1_chr2_-_178973065_178973065	0.167743	LHX3,4.p2	AB038041|PDE11A|50940|phosphodiesterase 11A	NM_001077197|PDE11A|50940|phosphodiesterase 11A
hg19_v1_chr21_-_15579243_15579253	0.167667	LHX3,4.p2	AY197607|LIPI|149998|lipase, member I	NM_198996|LIPI|149998|lipase, member I
hg19_v1_chr8_-_7673137_7673237	0.167545	LHX3,4.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg19_v1_chr16_+_25228282_25228319	0.167192	LHX3,4.p2	AB013456|AQP8|343|aquaporin 8	AF067797|AQP8|343|aquaporin 8	NM_001169|AQP8|343|aquaporin 8	AK222975|AQP8|343|aquaporin 8	AK222964|AQP8|343|aquaporin 8
hg19_v1_chr7_-_104567089_104567092	0.166989	LHX3,4.p2	BC050337|LOC723809|723809|uncharacterized LOC723809
hg19_v1_chr13_+_24463006_24463027	0.165625	LHX3,4.p2	BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)
hg19_v1_chr3_+_12329332_12329581	0.165377	LHX3,4.p2	NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma	NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma	X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma	AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg19_v1_chr6_-_76782204_76782394	0.165061	LHX3,4.p2	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1
hg19_v1_chr2_-_200213802_200213898	0.164495	LHX3,4.p2	AK025127|SATB2|23314|SATB homeobox 2
hg19_v1_chr20_+_30063090_30063109	0.162668	LHX3,4.p2	AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1
hg19_v1_chrX_+_91090459_91090503	0.162632	LHX3,4.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr15_+_52201590_52201630	0.1617	LHX3,4.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr11_-_104839263_104839331	0.160825	LHX3,4.p2	U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase
hg19_v1_chr12_-_21487831_21487833	0.160724	LHX3,4.p2	NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2
hg19_v1_chr6_-_33771756_33771792	0.160427	LHX3,4.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg19_v1_chr5_-_158637060_158637060	0.159024	LHX3,4.p2	AK308394|RNF145|153830|ring finger protein 145	NM_001199380|RNF145|153830|ring finger protein 145
hg19_v1_chr15_-_31947541_31947541	0.158123	LHX3,4.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr2_-_167343477_167343480	0.158094	LHX3,4.p2	BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha
hg19_v1_chr12_+_20848288_20848702	0.157947	LHX3,4.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr22_+_44395090_44395090	0.15681	LHX3,4.p2	AF303887|PARVB|29780|parvin, beta	NM_001003828|PARVB|29780|parvin, beta
hg19_v1_chr1_-_160549271_160549305	0.156593	LHX3,4.p2	AK313496|CD84|8832|CD84 molecule	AF054815|CD84|8832|CD84 molecule	AF054816|CD84|8832|CD84 molecule	AF054817|CD84|8832|CD84 molecule	AF054818|CD84|8832|CD84 molecule	U96627|CD84|8832|CD84 molecule	Y12632|CD84|8832|CD84 molecule	NM_001184879|CD84|8832|CD84 molecule	NM_001184881|CD84|8832|CD84 molecule	NM_001184882|CD84|8832|CD84 molecule	NM_003874|CD84|8832|CD84 molecule
hg19_v1_chrX_+_83116153_83116190	0.156168	LHX3,4.p2	BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1
hg19_v1_chr6_+_159070994_159071115	0.155629	LHX3,4.p2	NM_001009991|SYTL3|94120|synaptotagmin-like 3	NM_001242384|SYTL3|94120|synaptotagmin-like 3	NM_001242394|SYTL3|94120|synaptotagmin-like 3	NM_001242395|SYTL3|94120|synaptotagmin-like 3	AK092729|SYTL3|94120|synaptotagmin-like 3	AK298712|SYTL3|94120|synaptotagmin-like 3	BC085612|SYTL3|94120|synaptotagmin-like 3
hg19_v1_chr14_-_21567069_21567172	0.155213	LHX3,4.p2	AK225811|ZNF219|51222|zinc finger protein 219	AK290700|ZNF219|51222|zinc finger protein 219	NM_001101672|ZNF219|51222|zinc finger protein 219
hg19_v1_chr9_+_103947316_103947336	0.155016	LHX3,4.p2	AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1
hg19_v1_chr20_+_30697291_30697447	0.154392	LHX3,4.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr2_-_55199894_55199922	0.153115	LHX3,4.p2	
hg19_v1_chr18_+_616671_616719	0.151088	LHX3,4.p2	DQ980621|CLUL1|27098|clusterin-like 1 (retinal)	NM_199167|CLUL1|27098|clusterin-like 1 (retinal)	AF395889|CLUL1|27098|clusterin-like 1 (retinal)	D63813|CLUL1|27098|clusterin-like 1 (retinal)
hg19_v1_chrX_-_15333726_15333745	0.150048	LHX3,4.p2	AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001201583|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr12_-_81991959_81992149	0.149969	LHX3,4.p2	AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr18_+_55019720_55019720	0.149775	LHX3,4.p2	AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v1_chr3_-_71592707_71592707	0.149613	LHX3,4.p2	AF250920|FOXP1|27086|forkhead box P1	NM_001244816|FOXP1|27086|forkhead box P1
hg19_v1_chr1_+_111413820_111413838	0.149513	LHX3,4.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg19_v1_chr19_-_7812396_7812463	0.149139	LHX3,4.p2	AY042221|CD209|30835|CD209 molecule	AY042222|CD209|30835|CD209 molecule	AY042223|CD209|30835|CD209 molecule	AY042224|CD209|30835|CD209 molecule	AY042225|CD209|30835|CD209 molecule	AY042226|CD209|30835|CD209 molecule	AY042227|CD209|30835|CD209 molecule	AY042228|CD209|30835|CD209 molecule	AY042229|CD209|30835|CD209 molecule	AY042230|CD209|30835|CD209 molecule	AY042231|CD209|30835|CD209 molecule	AY042232|CD209|30835|CD209 molecule	AY042233|CD209|30835|CD209 molecule	BC110615|CD209|30835|CD209 molecule	AF290886|CD209|30835|CD209 molecule	AK293089|CD209|30835|CD209 molecule	M98457|CD209|30835|CD209 molecule	AK304190|CD209|30835|CD209 molecule	AK313585|CD209|30835|CD209 molecule	NM_001144893|CD209|30835|CD209 molecule	NM_001144894|CD209|30835|CD209 molecule	NM_001144895|CD209|30835|CD209 molecule	NM_001144896|CD209|30835|CD209 molecule	NM_001144897|CD209|30835|CD209 molecule	NM_001144899|CD209|30835|CD209 molecule	NM_021155|CD209|30835|CD209 molecule
hg19_v1_chr6_+_53883713_53883788	0.14785	LHX3,4.p2	NM_138569|MLIP|90523|muscular LMNA-interacting protein	BX647567|MLIP|90523|muscular LMNA-interacting protein	AK055530|MLIP|90523|muscular LMNA-interacting protein
hg19_v1_chr19_-_22193720_22193750	0.146838	LHX3,4.p2	BC038199|ZNF208|7757|zinc finger protein 208	AK096236|ZNF208|7757|zinc finger protein 208	NM_007153|ZNF208|7757|zinc finger protein 208
hg19_v1_chr5_+_140529619_140529838	0.146056	LHX3,4.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr20_+_37101457_37101559	0.145616	LHX3,4.p2	AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)
hg19_v1_chr4_-_122854192_122854267	0.14546	LHX3,4.p2	AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg19_v1_chr12_-_21927614_21927746	0.145002	LHX3,4.p2	BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v1_chr9_+_130026755_130026860	0.144048	LHX3,4.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg19_v1_chr1_+_14031349_14031349	0.143785	LHX3,4.p2	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain	NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain	U17838|PRDM2|7799|PR domain containing 2, with ZNF domain
hg19_v1_chrX_+_49091926_49091929	0.143084	LHX3,4.p2	NM_014008|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr8_-_122653493_122653760	0.142785	LHX3,4.p2	BC109071|HAS2|3037|hyaluronan synthase 2	BC109072|HAS2|3037|hyaluronan synthase 2	NM_005328|HAS2|3037|hyaluronan synthase 2	U54804|HAS2|3037|hyaluronan synthase 2	AK297724|HAS2|3037|hyaluronan synthase 2
hg19_v1_chr1_-_235814053_235814053	0.14253	LHX3,4.p2	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4
hg19_v1_chr1_+_160370363_160370395	0.142451	LHX3,4.p2	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)
hg19_v1_chr8_-_18666295_18666404	0.142293	LHX3,4.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr20_+_55926144_55926294	0.141394	LHX3,4.p2	NM_003610|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)	AK307966|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)
hg19_v1_chr7_+_114066554_114066706	0.140977	LHX3,4.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg19_v1_chr3_-_119963141_119963141	0.140515	LHX3,4.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg19_v1_chr1_+_17575592_17575606	0.140406	LHX3,4.p2	AB026831|PADI3|51702|peptidyl arginine deiminase, type III	NM_016233|PADI3|51702|peptidyl arginine deiminase, type III	BC109091|PADI3|51702|peptidyl arginine deiminase, type III	BC041592|PADI3|51702|peptidyl arginine deiminase, type III	BC109092|PADI3|51702|peptidyl arginine deiminase, type III
hg19_v1_chr3_+_361365_361459	0.139554	LHX3,4.p2	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr6_-_38563763_38563842	0.13869	LHX3,4.p2	BC101354|BTBD9|114781|BTB (POZ) domain containing 9	BC101355|BTBD9|114781|BTB (POZ) domain containing 9	BC101356|BTBD9|114781|BTB (POZ) domain containing 9	BC101357|BTBD9|114781|BTB (POZ) domain containing 9	AK057507|BTBD9|114781|BTB (POZ) domain containing 9	NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9	NM_152733|BTBD9|114781|BTB (POZ) domain containing 9
hg19_v1_chr3_+_111717585_111717829	0.138642	LHX3,4.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chr14_-_88793250_88793255	0.138591	LHX3,4.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr14_-_95599794_95599839	0.13847	LHX3,4.p2	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr1_-_205744543_205744614	0.137911	LHX3,4.p2	BC002585|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	BX647960|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK308359|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK311085|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK313000|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135662|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135663|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135664|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_003929|RAB7L1|8934|RAB7, member RAS oncogene family-like 1
hg19_v1_chr1_-_7913490_7913550	0.137679	LHX3,4.p2	AF140630|UTS2|10911|urotensin 2	BC126443|UTS2|10911|urotensin 2	BC171734|UTS2|10911|urotensin 2	NM_021995|UTS2|10911|urotensin 2
hg19_v1_chr1_+_150459913_150459951	0.137428	LHX3,4.p2	AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr4_+_102734982_102735035	0.13658	LHX3,4.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg19_v1_chr10_-_21186530_21186530	0.136393	LHX3,4.p2	NM_006393|NEBL|10529|nebulette	Y16241|NEBL|10529|nebulette
hg19_v1_chrX_+_91089658_91089658	0.135696	LHX3,4.p2	AB026187|PCDH11X|27328|protocadherin 11 X-linked	AF332218|PCDH11X|27328|protocadherin 11 X-linked	AF332219|PCDH11X|27328|protocadherin 11 X-linked	AJ564932|PCDH11X|27328|protocadherin 11 X-linked	NM_014522|PCDH11X|27328|protocadherin 11 X-linked	NM_032968|PCDH11X|27328|protocadherin 11 X-linked	NM_032969|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr2_-_69180011_69180101	0.135548	LHX3,4.p2	BC110809|GKN2|200504|gastrokine 2	AJ966788|GKN2|200504|gastrokine 2	AY943908|GKN2|200504|gastrokine 2	AF494509|GKN2|200504|gastrokine 2	AY358664|GKN2|200504|gastrokine 2	NM_182536|GKN2|200504|gastrokine 2
hg19_v1_chr17_+_78518742_78518894	0.135279	LHX3,4.p2	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1
hg19_v1_chr13_+_97928414_97928519	0.134431	LHX3,4.p2	AY101770|MBNL2|10150|muscleblind-like 2 (Drosophila)	AK304699|MBNL2|10150|muscleblind-like 2 (Drosophila)	EU446757|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr5_+_76435073_76435100	0.134382	LHX3,4.p2	
hg19_v1_chr13_-_103054027_103054123	0.134156	LHX3,4.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg19_v1_chr6_+_154331630_154331635	0.133776	LHX3,4.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg19_v1_chr6_+_139349818_139349857	0.133669	LHX3,4.p2	NM_021243|C6orf115|58527|chromosome 6 open reading frame 115	AF161398|C6orf115|58527|chromosome 6 open reading frame 115
hg19_v1_chr4_+_95376396_95376505	0.133652	LHX3,4.p2	BC026029|PDLIM5|10611|PDZ and LIM domain 5	AM393306|PDLIM5|10611|PDZ and LIM domain 5	AM393394|PDLIM5|10611|PDZ and LIM domain 5	AM393485|PDLIM5|10611|PDZ and LIM domain 5	AM393621|PDLIM5|10611|PDZ and LIM domain 5	AM393813|PDLIM5|10611|PDZ and LIM domain 5	DQ890686|PDLIM5|10611|PDZ and LIM domain 5	DQ893868|PDLIM5|10611|PDZ and LIM domain 5	AY598328|PDLIM5|10611|PDZ and LIM domain 5	BT007328|PDLIM5|10611|PDZ and LIM domain 5
hg19_v1_chr6_-_64029847_64029881	0.132175	LHX3,4.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr20_+_1184097_1184167	0.129655	LHX3,4.p2	AK092524|C20orf202|400831|chromosome 20 open reading frame 202	NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202	BC127730|C20orf202|400831|chromosome 20 open reading frame 202	BC127731|C20orf202|400831|chromosome 20 open reading frame 202	BC141955|C20orf202|400831|chromosome 20 open reading frame 202	BC141956|C20orf202|400831|chromosome 20 open reading frame 202	BC150532|C20orf202|400831|chromosome 20 open reading frame 202
hg19_v1_chr15_+_58430394_58430579	0.12936	LHX3,4.p2	AK300055|AQP9|366|aquaporin 9	NM_020980|AQP9|366|aquaporin 9	AK313214|AQP9|366|aquaporin 9	AF016495|AQP9|366|aquaporin 9	AB008775|AQP9|366|aquaporin 9	BC026258|AQP9|366|aquaporin 9
hg19_v1_chr11_-_85437457_85437510	0.129338	LHX3,4.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr2_-_227663454_227663505	0.129243	LHX3,4.p2	EU831611|IRS1|3667|insulin receptor substrate 1	EU831698|IRS1|3667|insulin receptor substrate 1	BC053895|IRS1|3667|insulin receptor substrate 1	NM_005544|IRS1|3667|insulin receptor substrate 1
hg19_v1_chr1_-_20141593_20141770	0.129167	LHX3,4.p2	CR457228|RNF186|54546|ring finger protein 186	BC051880|RNF186|54546|ring finger protein 186	BC030960|RNF186|54546|ring finger protein 186	AK000232|RNF186|54546|ring finger protein 186	AK222991|RNF186|54546|ring finger protein 186	NM_019062|RNF186|54546|ring finger protein 186
hg19_v1_chr2_+_96257765_96257765	0.129052	LHX3,4.p2	BC015353|TRIM43|129868|tripartite motif containing 43	NM_138800|TRIM43|129868|tripartite motif containing 43
hg19_v1_chr12_-_10955168_10955225	0.129048	LHX3,4.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg19_v1_chr1_+_167298382_167298497	0.128479	LHX3,4.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg19_v1_chr8_-_91094924_91095106	0.128315	LHX3,4.p2	X06661|CALB1|793|calbindin 1, 28kDa	BC006478|CALB1|793|calbindin 1, 28kDa	AK054881|CALB1|793|calbindin 1, 28kDa	AK312491|CALB1|793|calbindin 1, 28kDa	BC020864|CALB1|793|calbindin 1, 28kDa	NM_004929|CALB1|793|calbindin 1, 28kDa
hg19_v1_chr2_-_166060552_166060603	0.127213	LHX3,4.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr5_+_69321071_69321259	0.126875	LHX3,4.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chrX_+_153533408_153533408	0.124596	LHX3,4.p2	NM_001145934|TKTL1|8277|transketolase-like 1
hg19_v1_chr11_+_59856136_59856238	0.12411	LHX3,4.p2	AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)
hg19_v1_chr10_-_104262404_104262511	0.124	LHX3,4.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr11_-_47516072_47516072	0.123653	LHX3,4.p2	BC031079|CELF1|10658|CUGBP, Elav-like family member 1	NM_198700|CELF1|10658|CUGBP, Elav-like family member 1
hg19_v1_chr16_-_28634873_28634906	0.123157	LHX3,4.p2	NM_177536|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v1_chr1_-_160549226_160549268	0.12245	LHX3,4.p2	CR541847|CD84|8832|CD84 molecule	DQ891708|CD84|8832|CD84 molecule	DQ894872|CD84|8832|CD84 molecule	BC020063|CD84|8832|CD84 molecule	U82988|CD84|8832|CD84 molecule	AJ223324|CD84|8832|CD84 molecule	AK296290|CD84|8832|CD84 molecule	CR933666|CD84|8832|CD84 molecule
hg19_v1_chr8_+_22210311_22210342	0.121485	LHX3,4.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg19_v1_chr3_-_101039403_101039441	0.12139	LHX3,4.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg19_v1_chr2_+_209271555_209271768	0.121298	LHX3,4.p2	BC036811|PTH2R|5746|parathyroid hormone 2 receptor	NM_005048|PTH2R|5746|parathyroid hormone 2 receptor	U25128|PTH2R|5746|parathyroid hormone 2 receptor	HQ257935|PTH2R|5746|parathyroid hormone 2 receptor	AY497546|PTH2R|5746|parathyroid hormone 2 receptor
hg19_v1_chr6_+_105404922_105404922	0.121243	LHX3,4.p2	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg19_v1_chr14_+_103851693_103851713	0.120089	LHX3,4.p2	NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr2_+_234296799_234296799	0.119505	LHX3,4.p2	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa	NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa
hg19_v1_chr1_+_213123853_213123982	0.119353	LHX3,4.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr10_-_22292362_22292537	0.117735	LHX3,4.p2	AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg19_v1_chr5_-_148016576_148016623	0.117516	LHX3,4.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg19_v1_chr10_+_123748688_123748777	0.117366	LHX3,4.p2	BC010219|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206861|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206862|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528098|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528099|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144599|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144600|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC150627|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC031036|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr11_-_71955201_71955204	0.117244	LHX3,4.p2	BC041564|PHOX2A|401|paired-like homeobox 2a
hg19_v1_chr11_+_5009420_5009439	0.117004	LHX3,4.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg19_v1_chr8_+_128748476_128748505	0.116883	LHX3,4.p2	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)
hg19_v1_chr11_-_123525300_123525314	0.116376	LHX3,4.p2	AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr3_+_99833773_99833773	0.116061	LHX3,4.p2	AK300704|C3orf26|84319|chromosome 3 open reading frame 26	NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26
hg19_v1_chr22_+_29449877_29449974	0.114967	LHX3,4.p2	BC042614|ZNRF3|84133|zinc and ring finger 3
hg19_v1_chr4_-_99851785_99851787	0.114907	LHX3,4.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chrM_+_10361_10600	0.114406	LHX3,4.p2	
hg19_v1_chrX_+_24073060_24073068	0.113486	LHX3,4.p2	BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v1_chr20_-_6104056_6104271	0.113271	LHX3,4.p2	AB105105|FERMT1|55612|fermitin family member 1	NM_017671|FERMT1|55612|fermitin family member 1
hg19_v1_chr14_+_103851775_103851997	0.113104	LHX3,4.p2	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr8_+_9953061_9953065	0.112305	LHX3,4.p2	AK293488|MSRA|4482|methionine sulfoxide reductase A	AY958430|MSRA|4482|methionine sulfoxide reductase A	AY958431|MSRA|4482|methionine sulfoxide reductase A	BC047552|MSRA|4482|methionine sulfoxide reductase A	NM_001135671|MSRA|4482|methionine sulfoxide reductase A	NM_001199729|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chrY_-_19882311_19882439	0.112116	LHX3,4.p2	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked
hg19_v1_chr15_+_25230199_25230249	0.11056	LHX3,4.p2	AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5
hg19_v1_chr13_+_111154013_111154089	0.110518	LHX3,4.p2	X05610|COL4A2|1284|collagen, type IV, alpha 2
hg19_v1_chr12_-_10605928_10605978	0.110395	LHX3,4.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg19_v1_chr20_+_24929904_24930141	0.109792	LHX3,4.p2	AF031824|CST7|8530|cystatin F (leukocystatin)	BC015507|CST7|8530|cystatin F (leukocystatin)	AB015225|CST7|8530|cystatin F (leukocystatin)	BT009825|CST7|8530|cystatin F (leukocystatin)	AF036342|CST7|8530|cystatin F (leukocystatin)	CR541860|CST7|8530|cystatin F (leukocystatin)	CR541878|CST7|8530|cystatin F (leukocystatin)
hg19_v1_chr1_-_213020947_213020990	0.108685	LHX3,4.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg19_v1_chr10_+_18240767_18240891	0.108532	LHX3,4.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg19_v1_chr8_-_72268720_72268978	0.108294	LHX3,4.p2	AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)	BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)	BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)	AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr2_-_178753464_178753465	0.108148	LHX3,4.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg19_v1_chr17_+_12569305_12569337	0.10767	LHX3,4.p2	AK128608|MYOCD|93649|myocardin	AK292885|MYOCD|93649|myocardin
hg19_v1_chr1_-_205091000_205091134	0.107374	LHX3,4.p2	DQ891205|RBBP5|5929|retinoblastoma binding protein 5	DQ894388|RBBP5|5929|retinoblastoma binding protein 5	BC075059|RBBP5|5929|retinoblastoma binding protein 5	BC075060|RBBP5|5929|retinoblastoma binding protein 5	AK290137|RBBP5|5929|retinoblastoma binding protein 5	BC037284|RBBP5|5929|retinoblastoma binding protein 5	AK296978|RBBP5|5929|retinoblastoma binding protein 5	X85134|RBBP5|5929|retinoblastoma binding protein 5	BC053856|RBBP5|5929|retinoblastoma binding protein 5
hg19_v1_chr18_-_70532933_70532933	0.106527	LHX3,4.p2	AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v1_chr8_-_102803178_102803188	0.10522	LHX3,4.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chrY_+_20297334_20297462	0.105219	LHX3,4.p2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2
hg19_v1_chr2_-_96150478_96150478	0.105215	LHX3,4.p2	NM_001164464|TRIM43B|653192|tripartite motif containing 43B
hg19_v1_chr3_+_108855560_108855566	0.104959	LHX3,4.p2	AK026416|FLJ22763|401081|uncharacterized LOC401081
hg19_v1_chr12_-_91398757_91398802	0.104142	LHX3,4.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg19_v1_chr17_-_42143937_42143995	0.104019	LHX3,4.p2	AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)	AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg19_v1_chr3_-_48130633_48130768	0.103932	LHX3,4.p2	AK054577|MAP4|4134|microtubule-associated protein 4	NM_001134364|MAP4|4134|microtubule-associated protein 4	NM_002375|MAP4|4134|microtubule-associated protein 4	NM_030885|MAP4|4134|microtubule-associated protein 4
hg19_v1_chr18_+_66465316_66465369	0.103848	LHX3,4.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr1_-_173886401_173886438	0.103833	LHX3,4.p2	D29832|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v1_chr1_-_200378832_200378986	0.103551	LHX3,4.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr17_-_38821286_38821415	0.103224	LHX3,4.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr4_-_80329354_80329381	0.102029	LHX3,4.p2	DQ891321|GK2|2712|glycerol kinase 2	DQ894505|GK2|2712|glycerol kinase 2	BC058888|GK2|2712|glycerol kinase 2	BC029820|GK2|2712|glycerol kinase 2	BC048274|GK2|2712|glycerol kinase 2	X78712|GK2|2712|glycerol kinase 2	NM_033214|GK2|2712|glycerol kinase 2	AK292241|GK2|2712|glycerol kinase 2	BC027598|GK2|2712|glycerol kinase 2
hg19_v1_chr10_-_90611675_90611731	0.100869	LHX3,4.p2	NM_144590|ANKRD22|118932|ankyrin repeat domain 22
hg19_v1_chrX_+_113818550_113818595	0.100656	LHX3,4.p2	NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C
hg19_v1_chr1_-_190446701_190446770	0.100007	LHX3,4.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr14_-_21058388_21058416	0.100006	LHX3,4.p2	BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)	NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)
hg19_v1_chr11_-_71955216_71955254	0.0997537	LHX3,4.p2	AK290645|PHOX2A|401|paired-like homeobox 2a	NM_005169|PHOX2A|401|paired-like homeobox 2a
hg19_v1_chr10_+_71561687_71561692	0.0995216	LHX3,4.p2	AJ293624|COL13A1|1305|collagen, type XIII, alpha 1
hg19_v1_chr21_+_30400229_30400257	0.0987862	LHX3,4.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg19_v1_chr2_-_109605668_109605827	0.0985593	LHX3,4.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg19_v1_chrX_-_130423387_130423438	0.0985026	LHX3,4.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr11_-_129062092_129062092	0.0984556	LHX3,4.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr5_-_148034089_148034091	0.0979839	LHX3,4.p2	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg19_v1_chr1_+_150459873_150459911	0.097962	LHX3,4.p2	AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr4_+_158141735_158142034	0.0979106	LHX3,4.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr21_-_43771069_43771207	0.0978095	LHX3,4.p2	X51698|TFF2|7032|trefoil factor 2	BC032820|TFF2|7032|trefoil factor 2	NM_005423|TFF2|7032|trefoil factor 2
hg19_v1_chr20_+_2944918_2944935	0.0973014	LHX3,4.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chrX_+_144902865_144903063	0.0958441	LHX3,4.p2	NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2
hg19_v1_chr3_-_62359189_62359189	0.0955283	LHX3,4.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg19_v1_chr3_-_124930192_124930242	0.095418	LHX3,4.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr5_+_40909617_40909673	0.0953939	LHX3,4.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr1_+_197237333_197237542	0.094878	LHX3,4.p2	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)	NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)	AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)	AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)	AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)	AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)	AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)	BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)	BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)	AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)
hg19_v1_chr22_+_18043147_18043291	0.0947892	LHX3,4.p2	AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18
hg19_v1_chr1_-_68915631_68915641	0.0947223	LHX3,4.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg19_v1_chr1_-_89357181_89357242	0.0939278	LHX3,4.p2	AB451296|GTF2B|2959|general transcription factor IIB	EU446894|GTF2B|2959|general transcription factor IIB	M76766|GTF2B|2959|general transcription factor IIB
hg19_v1_chr20_+_57414732_57414749	0.0922493	LHX3,4.p2	AK314549|GNAS|2778|GNAS complex locus
hg19_v1_chr10_-_42863435_42863492	0.0918106	LHX3,4.p2	AF519622|LOC441666|441666|zinc finger protein 91 pseudogene
hg19_v1_chr4_-_100212085_100212184	0.0912705	LHX3,4.p2	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v1_chr1_-_53608120_53608303	0.0905266	LHX3,4.p2	JF917096|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ892299|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ895498|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC012119|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC017242|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593061|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC000651|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	NM_006671|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593059|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593060|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7
hg19_v1_chr5_+_38445577_38445672	0.0903696	LHX3,4.p2	NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg19_v1_chr10_-_22292640_22292690	0.0903342	LHX3,4.p2	BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg19_v1_chr3_+_2280512_2280512	0.0892622	LHX3,4.p2	NM_001206955|CNTN4|152330|contactin 4
hg19_v1_chr15_+_93443418_93443555	0.0891185	LHX3,4.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr11_-_62911692_62911692	0.0885413	LHX3,4.p2	BC034394|SLC22A24|283238|solute carrier family 22, member 24	NM_001136506|SLC22A24|283238|solute carrier family 22, member 24
hg19_v1_chr14_-_64749530_64749796	0.0885346	LHX3,4.p2	AF074599|ESR2|2100|estrogen receptor 2 (ER beta)	AY438022|ESR2|2100|estrogen receptor 2 (ER beta)	X99101|ESR2|2100|estrogen receptor 2 (ER beta)	DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)	DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)	DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)	DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)	HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)	HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)	AF124790|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)	AB006590|ESR2|2100|estrogen receptor 2 (ER beta)
hg19_v1_chr5_+_42756919_42756958	0.0884398	LHX3,4.p2	AK303469|CCDC152|100129792|coiled-coil domain containing 152	NM_001134848|CCDC152|100129792|coiled-coil domain containing 152	AK127368|CCDC152|100129792|coiled-coil domain containing 152	BC015985|CCDC152|100129792|coiled-coil domain containing 152	BC039102|CCDC152|100129792|coiled-coil domain containing 152
hg19_v1_chrX_+_100354797_100354797	0.0881909	LHX3,4.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr9_+_105757592_105757662	0.0879424	LHX3,4.p2	BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2
hg19_v1_chrX_-_13835213_13835231	0.0878812	LHX3,4.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg19_v1_chr4_-_103245468_103245468	0.0876387	LHX3,4.p2	AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr5_+_71502700_71502827	0.0874877	LHX3,4.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr17_-_10421858_10421858	0.0871429	LHX3,4.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg19_v1_chr1_+_198608136_198608210	0.0869286	LHX3,4.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr2_+_32502956_32502969	0.0867646	LHX3,4.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr3_-_196242190_196242236	0.0864701	LHX3,4.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg19_v1_chrX_+_30248552_30248552	0.0859232	LHX3,4.p2	AK057441|MAGEB3|4114|melanoma antigen family B, 3	NM_002365|MAGEB3|4114|melanoma antigen family B, 3
hg19_v1_chr4_-_69817478_69817508	0.0857892	LHX3,4.p2	HQ258456|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3
hg19_v1_chr18_+_61370193_61370193	0.0852182	LHX3,4.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg19_v1_chr12_-_25150372_25150452	0.0845716	LHX3,4.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg19_v1_chr17_-_42144001_42144031	0.0839214	LHX3,4.p2	AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg19_v1_chr1_+_110543548_110543548	0.0836344	LHX3,4.p2	NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr9_-_21482311_21482311	0.0823447	LHX3,4.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg19_v1_chr7_-_92855780_92855786	0.0819267	LHX3,4.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr16_+_12058963_12059206	0.0818814	LHX3,4.p2	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17
hg19_v1_chr6_+_131894343_131894422	0.0817951	LHX3,4.p2	NM_000045|ARG1|383|arginase, liver	NM_001244438|ARG1|383|arginase, liver	AY074488|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg19_v1_chr10_-_52645384_52645402	0.0815268	LHX3,4.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr12_+_10163225_10163358	0.0814921	LHX3,4.p2	AY358810|CLEC12B|387837|C-type lectin domain family 12, member B	AK128243|CLEC12B|387837|C-type lectin domain family 12, member B	NM_001129998|CLEC12B|387837|C-type lectin domain family 12, member B	NM_205852|CLEC12B|387837|C-type lectin domain family 12, member B	BC136805|CLEC12B|387837|C-type lectin domain family 12, member B	BC136806|CLEC12B|387837|C-type lectin domain family 12, member B	AK131027|CLEC12B|387837|C-type lectin domain family 12, member B	BC036036|CLEC12B|387837|C-type lectin domain family 12, member B	DQ368812|CLEC12B|387837|C-type lectin domain family 12, member B
hg19_v1_chr1_+_57320442_57320574	0.0813245	LHX3,4.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide	HQ258328|C8A|731|complement component 8, alpha polypeptide
hg19_v1_chrX_+_49091931_49091965	0.0808784	LHX3,4.p2	AK298264|CCDC22|28952|coiled-coil domain containing 22	AK296911|CCDC22|28952|coiled-coil domain containing 22	AK291976|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr11_+_128563955_128563968	0.0808005	LHX3,4.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr16_+_69726751_69726828	0.080505	LHX3,4.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v1_chr14_-_24682667_24682773	0.0802476	LHX3,4.p2	AB100262|CHMP4A|29082|charged multivesicular body protein 4A	BC010893|CHMP4A|29082|charged multivesicular body protein 4A	AF161483|CHMP4A|29082|charged multivesicular body protein 4A	BC107699|CHMP4A|29082|charged multivesicular body protein 4A	HQ258138|CHMP4A|29082|charged multivesicular body protein 4A
hg19_v1_chr5_+_145316120_145316223	0.0792996	LHX3,4.p2	NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2	AK074234|SH3RF2|153769|SH3 domain containing ring finger 2	AK292576|SH3RF2|153769|SH3 domain containing ring finger 2	BC125106|SH3RF2|153769|SH3 domain containing ring finger 2	BC125107|SH3RF2|153769|SH3 domain containing ring finger 2
hg19_v1_chr17_-_10325266_10325266	0.0790137	LHX3,4.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg19_v1_chr17_-_39341126_39341146	0.0783409	LHX3,4.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg19_v1_chrX_-_154250769_154251027	0.0781728	LHX3,4.p2	FN811132|F8|2157|coagulation factor VIII, procoagulant component	AX746360|F8|2157|coagulation factor VIII, procoagulant component	X01179|F8|2157|coagulation factor VIII, procoagulant component	K01740|F8|2157|coagulation factor VIII, procoagulant component	AK292902|F8|2157|coagulation factor VIII, procoagulant component	M14113|F8|2157|coagulation factor VIII, procoagulant component	NM_000132|F8|2157|coagulation factor VIII, procoagulant component	AK307726|F8|2157|coagulation factor VIII, procoagulant component
hg19_v1_chr5_+_40841296_40841589	0.0770842	LHX3,4.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg19_v1_chr22_+_39966757_39966757	0.0764023	LHX3,4.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg19_v1_chr3_-_108248168_108248168	0.0757645	LHX3,4.p2	AB023217|MYH15|22989|myosin, heavy chain 15	NM_014981|MYH15|22989|myosin, heavy chain 15
hg19_v1_chr8_-_101936521_101936527	0.0756966	LHX3,4.p2	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg19_v1_chrX_-_21676416_21676447	0.0751796	LHX3,4.p2	BC109031|KLHL34|257240|kelch-like 34 (Drosophila)	AK092279|KLHL34|257240|kelch-like 34 (Drosophila)	NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)
hg19_v1_chr10_+_69869249_69869427	0.0751793	LHX3,4.p2	NM_032578|MYPN|84665|myopalladin	AK027343|MYPN|84665|myopalladin	BX647637|MYPN|84665|myopalladin	AL832002|MYPN|84665|myopalladin	AL834247|MYPN|84665|myopalladin	BC142609|MYPN|84665|myopalladin	BC144333|MYPN|84665|myopalladin	BC144334|MYPN|84665|myopalladin
hg19_v1_chr3_-_52294427_52294468	0.0748149	LHX3,4.p2	BC018941|WDR82|80335|WD repeat domain 82	AK074290|WDR82|80335|WD repeat domain 82
hg19_v1_chr3_+_148415657_148415717	0.0744088	LHX3,4.p2	NM_000685|AGTR1|185|angiotensin II receptor, type 1	NM_004835|AGTR1|185|angiotensin II receptor, type 1	NM_009585|AGTR1|185|angiotensin II receptor, type 1	NM_031850|AGTR1|185|angiotensin II receptor, type 1	AK291541|AGTR1|185|angiotensin II receptor, type 1	BC068494|AGTR1|185|angiotensin II receptor, type 1	BC022447|AGTR1|185|angiotensin II receptor, type 1	M87290|AGTR1|185|angiotensin II receptor, type 1	S77410|AGTR1|185|angiotensin II receptor, type 1	X65699|AGTR1|185|angiotensin II receptor, type 1
hg19_v1_chr3_+_119499330_119499330	0.0742915	LHX3,4.p2	AJ009936|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	AJ009937|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	NM_003889|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	NM_033013|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2
hg19_v1_chr1_+_203766650_203766650	0.074137	LHX3,4.p2	NM_001174108|ZBED6|100381270|zinc finger, BED-type containing 6
hg19_v1_chr4_+_22694547_22694638	0.0738747	LHX3,4.p2	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)
hg19_v1_chr6_-_32908583_32908846	0.0735242	LHX3,4.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg19_v1_chr3_-_164796275_164796282	0.0733328	LHX3,4.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr4_-_72649734_72650078	0.0727075	LHX3,4.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr12_-_112123506_112123595	0.0716814	LHX3,4.p2	AK308279|BRAP|8315|BRCA1 associated protein
hg19_v1_chr1_-_32385258_32385258	0.0715985	LHX3,4.p2	NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2
hg19_v1_chr9_+_131549561_131549632	0.0711967	LHX3,4.p2	AK289777|TBC1D13|54662|TBC1 domain family, member 13	BC150311|TBC1D13|54662|TBC1 domain family, member 13	AK123828|TBC1D13|54662|TBC1 domain family, member 13	BC014898|TBC1D13|54662|TBC1 domain family, member 13	BC132817|TBC1D13|54662|TBC1 domain family, member 13	BC136509|TBC1D13|54662|TBC1 domain family, member 13	AK001605|TBC1D13|54662|TBC1 domain family, member 13	BC140080|TBC1D13|54662|TBC1 domain family, member 13	BC143010|TBC1D13|54662|TBC1 domain family, member 13	HQ258408|TBC1D13|54662|TBC1 domain family, member 13	AB449899|TBC1D13|54662|TBC1 domain family, member 13
hg19_v1_chr2_-_158300517_158300611	0.0706832	LHX3,4.p2	L06633|CYTIP|9595|cytohesin 1 interacting protein	AF068836|CYTIP|9595|cytohesin 1 interacting protein	BC036449|CYTIP|9595|cytohesin 1 interacting protein	AK312753|CYTIP|9595|cytohesin 1 interacting protein	NM_004288|CYTIP|9595|cytohesin 1 interacting protein
hg19_v1_chr2_+_201473942_201474053	0.0704617	LHX3,4.p2	AK297930|AOX1|316|aldehyde oxidase 1	AK307738|AOX1|316|aldehyde oxidase 1
hg19_v1_chr7_+_86273219_86273231	0.0703522	LHX3,4.p2	BC041407|GRM3|2913|glutamate receptor, metabotropic 3	NM_000840|GRM3|2913|glutamate receptor, metabotropic 3
hg19_v1_chr6_-_74161978_74162011	0.0701663	LHX3,4.p2	BC113606|MB21D1|115004|Mab-21 domain containing 1	BC113608|MB21D1|115004|Mab-21 domain containing 1	BC143694|MB21D1|115004|Mab-21 domain containing 1	BC012928|MB21D1|115004|Mab-21 domain containing 1	AK097148|MB21D1|115004|Mab-21 domain containing 1	BC108714|MB21D1|115004|Mab-21 domain containing 1
hg19_v1_chr19_+_54466289_54466429	0.0700206	LHX3,4.p2	AF361354|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8	NM_031895|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8	AF288388|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8
hg19_v1_chr2_+_113816214_113816275	0.0698212	LHX3,4.p2	BC024747|IL36RN|26525|interleukin 36 receptor antagonist	NM_173170|IL36RN|26525|interleukin 36 receptor antagonist	AJ242738|IL36RN|26525|interleukin 36 receptor antagonist
hg19_v1_chrX_+_68835910_68835960	0.0697335	LHX3,4.p2	AF040628|EDA|1896|ectodysplasin A	AF060999|EDA|1896|ectodysplasin A	AF061189|EDA|1896|ectodysplasin A	AF061190|EDA|1896|ectodysplasin A	AF061191|EDA|1896|ectodysplasin A	AF061192|EDA|1896|ectodysplasin A	AF061193|EDA|1896|ectodysplasin A	AF061194|EDA|1896|ectodysplasin A	NM_001005609|EDA|1896|ectodysplasin A	NM_001005610|EDA|1896|ectodysplasin A	NM_001005612|EDA|1896|ectodysplasin A	NM_001005613|EDA|1896|ectodysplasin A	NM_001399|EDA|1896|ectodysplasin A	U59228|EDA|1896|ectodysplasin A	BC126143|EDA|1896|ectodysplasin A	BC144049|EDA|1896|ectodysplasin A	BC144051|EDA|1896|ectodysplasin A
hg19_v1_chr3_+_184033936_184033978	0.0692542	LHX3,4.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr1_-_51887740_51887792	0.0690445	LHX3,4.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr14_-_101036130_101036130	0.0681957	LHX3,4.p2	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)	NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)
hg19_v1_chr15_-_100882105_100882182	0.0680676	LHX3,4.p2	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17	NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17
hg19_v1_chr5_+_139876504_139876626	0.0678109	LHX3,4.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg19_v1_chr12_-_88423145_88423175	0.0673703	LHX3,4.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg19_v1_chr19_+_9361605_9361719	0.0668473	LHX3,4.p2	BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24	NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24
hg19_v1_chr1_+_40862471_40862506	0.0665835	LHX3,4.p2	AK316218|SMAP2|64744|small ArfGAP2	NM_001198980|SMAP2|64744|small ArfGAP2	AK298702|SMAP2|64744|small ArfGAP2
hg19_v1_chr19_+_52800424_52800450	0.0664212	LHX3,4.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg19_v1_chr3_+_40518601_40518685	0.0659895	LHX3,4.p2	NM_001145082|ZNF619|285267|zinc finger protein 619	NM_001145093|ZNF619|285267|zinc finger protein 619	AK304139|ZNF619|285267|zinc finger protein 619	NM_001145083|ZNF619|285267|zinc finger protein 619	AK075245|ZNF619|285267|zinc finger protein 619	AK304793|ZNF619|285267|zinc finger protein 619	AK304741|ZNF619|285267|zinc finger protein 619
hg19_v1_chr20_+_5986560_5986760	0.0657703	LHX3,4.p2	NM_019095|CRLS1|54675|cardiolipin synthase 1
hg19_v1_chr11_-_118084073_118084073	0.0656715	LHX3,4.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr1_+_171217632_171217691	0.0655566	LHX3,4.p2	AK290113|FMO1|2326|flavin containing monooxygenase 1	AK315100|FMO1|2326|flavin containing monooxygenase 1	M64082|FMO1|2326|flavin containing monooxygenase 1	NM_002021|FMO1|2326|flavin containing monooxygenase 1	AK296198|FMO1|2326|flavin containing monooxygenase 1
hg19_v1_chr2_+_137748461_137748461	0.0654665	LHX3,4.p2	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B
hg19_v1_chr6_-_49712055_49712167	0.0650221	LHX3,4.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr5_+_82767492_82767743	0.0645087	LHX3,4.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg19_v1_chr11_-_85425790_85425790	0.0644749	LHX3,4.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr6_+_101846668_101846686	0.0638294	LHX3,4.p2	BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg19_v1_chr13_-_103411421_103411421	0.0634133	LHX3,4.p2	NM_001146197|CCDC168|643677|coiled-coil domain containing 168
hg19_v1_chr13_-_38172862_38172980	0.0632716	LHX3,4.p2	EU262883|POSTN|10631|periostin, osteoblast specific factor	EU262884|POSTN|10631|periostin, osteoblast specific factor	EU262885|POSTN|10631|periostin, osteoblast specific factor	EU262886|POSTN|10631|periostin, osteoblast specific factor	AY140646|POSTN|10631|periostin, osteoblast specific factor	AY918092|POSTN|10631|periostin, osteoblast specific factor	BC106709|POSTN|10631|periostin, osteoblast specific factor	BC106710|POSTN|10631|periostin, osteoblast specific factor	D13666|POSTN|10631|periostin, osteoblast specific factor	GU354210|POSTN|10631|periostin, osteoblast specific factor	D13665|POSTN|10631|periostin, osteoblast specific factor	NM_001135934|POSTN|10631|periostin, osteoblast specific factor	NM_001135935|POSTN|10631|periostin, osteoblast specific factor	NM_001135936|POSTN|10631|periostin, osteoblast specific factor	NM_006475|POSTN|10631|periostin, osteoblast specific factor
hg19_v1_chrY_+_1660485_1660573	0.063112	LHX3,4.p2	BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A
hg19_v1_chr17_+_4692226_4692317	0.0618338	LHX3,4.p2	BC029290|GLTPD2|388323|glycolipid transfer protein domain containing 2	NM_001014985|GLTPD2|388323|glycolipid transfer protein domain containing 2
hg19_v1_chr15_-_75194542_75194610	0.0614384	LHX3,4.p2	AK025373|C15orf17|57184|chromosome 15 open reading frame 17
hg19_v1_chr5_+_40909558_40909606	0.0612513	LHX3,4.p2	AK290349|C7|730|complement component 7	Y11720|C7|730|complement component 7	NM_000587|C7|730|complement component 7	BC065305|C7|730|complement component 7	BC041807|C7|730|complement component 7
hg19_v1_chr17_-_6983503_6983599	0.0608181	LHX3,4.p2	D50532|CLEC10A|10462|C-type lectin domain family 10, member A	BC027858|CLEC10A|10462|C-type lectin domain family 10, member A	BC039011|CLEC10A|10462|C-type lectin domain family 10, member A	AK291975|CLEC10A|10462|C-type lectin domain family 10, member A	AK292363|CLEC10A|10462|C-type lectin domain family 10, member A	NM_006344|CLEC10A|10462|C-type lectin domain family 10, member A	NM_182906|CLEC10A|10462|C-type lectin domain family 10, member A
hg19_v1_chr11_-_4718948_4719075	0.0595443	LHX3,4.p2	BC020768|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AY033942|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AK314051|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	NM_030774|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2
hg19_v1_chr4_-_10041833_10042011	0.0591692	LHX3,4.p2	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9
hg19_v1_chr2_-_136594749_136594749	0.0591017	LHX3,4.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr13_+_78109808_78109894	0.0588788	LHX3,4.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr6_-_29012951_29013016	0.0585434	LHX3,4.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg19_v1_chrX_+_1710485_1710573	0.0584631	LHX3,4.p2	BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A
hg19_v1_chr7_-_155326538_155326556	0.0582474	LHX3,4.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg19_v1_chr16_+_2809933_2810070	0.0579176	LHX3,4.p2	
hg19_v1_chr2_+_103378489_103378676	0.0577196	LHX3,4.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182	HQ258113|TMEM182|130827|transmembrane protein 182
hg19_v1_chr2_+_90211704_90211733	0.0574903	LHX3,4.p2	
hg19_v1_chr20_+_20037289_20037351	0.0572244	LHX3,4.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg19_v1_chr3_+_172472246_172472359	0.0570322	LHX3,4.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr18_+_72201669_72201702	0.0553423	LHX3,4.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chr17_-_39041436_39041497	0.0550181	LHX3,4.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg19_v1_chrX_+_123234462_123234598	0.0547905	LHX3,4.p2	AK026678|STAG2|10735|stromal antigen 2
hg19_v1_chr14_+_39583426_39583509	0.0546509	LHX3,4.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr10_-_46619935_46620057	0.0544351	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg19_v1_chr12_+_54410641_54410714	0.0542183	LHX3,4.p2	NM_014620|HOXC4|3221|homeobox C4	NM_153693|HOXC6|3223|homeobox C6	X07495|HOXC4|3221|homeobox C4
hg19_v1_chr4_-_177116713_177116821	0.0535733	LHX3,4.p2	BC021731|SPATA4|132851|spermatogenesis associated 4	BC029428|SPATA4|132851|spermatogenesis associated 4	AY040204|SPATA4|132851|spermatogenesis associated 4	NM_144644|SPATA4|132851|spermatogenesis associated 4
hg19_v1_chr5_+_76382458_76382591	0.0527494	LHX3,4.p2	AK311179|LOC728723|728723|uncharacterized LOC728723
hg19_v1_chr9_-_123639462_123639495	0.0524269	LHX3,4.p2	AK122744|PHF19|26147|PHD finger protein 19	BC022374|PHF19|26147|PHD finger protein 19	AK303433|PHF19|26147|PHD finger protein 19
hg19_v1_chr1_-_67266930_67266941	0.0523469	LHX3,4.p2	BC101646|INSL5|10022|insulin-like 5	BC101648|INSL5|10022|insulin-like 5	AF133816|INSL5|10022|insulin-like 5	AY359030|INSL5|10022|insulin-like 5	NM_005478|INSL5|10022|insulin-like 5
hg19_v1_chr16_-_52581713_52581713	0.0513988	LHX3,4.p2	AK299202|TOX3|27324|TOX high mobility group box family member 3	NM_001146188|TOX3|27324|TOX high mobility group box family member 3
hg19_v1_chr12_-_91398744_91398750	0.0509266	LHX3,4.p2	U59111|EPYC|1833|epiphycan
hg19_v1_chr14_-_106733392_106733641	0.0504983	LHX3,4.p2	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr2_-_225378320_225378353	0.0504677	LHX3,4.p2	U58089|CUL3|8452|cullin 3
hg19_v1_chr3_+_156544075_156544147	0.0502584	LHX3,4.p2	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1	AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1	BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1
hg19_v1_chr5_-_94417185_94417351	0.0500689	LHX3,4.p2	AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1	AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1	BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1	AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1
hg19_v1_chr6_+_72596405_72596451	0.0496364	LHX3,4.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr10_-_115423640_115423804	0.0493745	LHX3,4.p2	AM392642|NRAP|4892|nebulin-related anchoring protein	AM393530|NRAP|4892|nebulin-related anchoring protein	BC126407|NRAP|4892|nebulin-related anchoring protein	BC143751|NRAP|4892|nebulin-related anchoring protein	AL831980|NRAP|4892|nebulin-related anchoring protein	AL832025|NRAP|4892|nebulin-related anchoring protein	AL832330|NRAP|4892|nebulin-related anchoring protein	BX640682|NRAP|4892|nebulin-related anchoring protein	AY177620|NRAP|4892|nebulin-related anchoring protein	AY177621|NRAP|4892|nebulin-related anchoring protein	BX641052|NRAP|4892|nebulin-related anchoring protein	BC005933|NRAP|4892|nebulin-related anchoring protein	BC017866|NRAP|4892|nebulin-related anchoring protein	BC058825|NRAP|4892|nebulin-related anchoring protein	BC070130|NRAP|4892|nebulin-related anchoring protein	AK056969|NRAP|4892|nebulin-related anchoring protein	AY081943|NRAP|4892|nebulin-related anchoring protein	NM_006175|NRAP|4892|nebulin-related anchoring protein	NM_198060|NRAP|4892|nebulin-related anchoring protein
hg19_v1_chr5_+_174151531_174151694	0.0492551	LHX3,4.p2	NM_002449|MSX2|4488|msh homeobox 2	D31771|MSX2|4488|msh homeobox 2	D89377|MSX2|4488|msh homeobox 2	S75361|MSX2|4488|msh homeobox 2	D26145|MSX2|4488|msh homeobox 2	BC015509|MSX2|4488|msh homeobox 2	X69295|MSX2|4488|msh homeobox 2	DQ891600|MSX2|4488|msh homeobox 2	DQ894795|MSX2|4488|msh homeobox 2	BT009814|MSX2|4488|msh homeobox 2
hg19_v1_chr4_+_147096834_147096900	0.049122	LHX3,4.p2	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr1_-_36789754_36789754	0.0486544	LHX3,4.p2	AK001509|FAM176B|55194|family with sequence similarity 176, member B	NM_018166|FAM176B|55194|family with sequence similarity 176, member B
hg19_v1_chr4_-_185139018_185139113	0.0481895	LHX3,4.p2	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6
hg19_v1_chr5_-_176981537_176981559	0.0480803	LHX3,4.p2	AB067518|FAM193B|54540|family with sequence similarity 193, member B	NM_001190946|FAM193B|54540|family with sequence similarity 193, member B
hg19_v1_chr2_-_169887832_169887832	0.0474602	LHX3,4.p2	AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v1_chr14_+_94492683_94492723	0.0473777	LHX3,4.p2	BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2
hg19_v1_chr3_-_170744458_170744522	0.0473122	LHX3,4.p2	J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2	AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2	BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2	AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2	AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v1_chr4_+_36283243_36283250	0.0472047	LHX3,4.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg19_v1_chr17_-_4938699_4938726	0.0470602	LHX3,4.p2	AB362534|GPR172B|55065|G protein-coupled receptor 172B	AK023570|GPR172B|55065|G protein-coupled receptor 172B	AB362533|GPR172B|55065|G protein-coupled receptor 172B	BC060810|GPR172B|55065|G protein-coupled receptor 172B	NM_001104577|GPR172B|55065|G protein-coupled receptor 172B	NM_017986|GPR172B|55065|G protein-coupled receptor 172B
hg19_v1_chr17_+_78518611_78518688	0.0470071	LHX3,4.p2	AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1	NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1	NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1	AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1	BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1
hg19_v1_chr6_+_151773421_151773421	0.0468604	LHX3,4.p2	AK022972|C6orf211|79624|chromosome 6 open reading frame 211	NM_024573|C6orf211|79624|chromosome 6 open reading frame 211
hg19_v1_chr1_+_211556141_211556154	0.046599	LHX3,4.p2	AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467
hg19_v1_chrM_+_9725_9967	0.0465691	LHX3,4.p2	
hg19_v1_chr3_+_35683848_35683848	0.0461455	LHX3,4.p2	BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr1_+_183774214_183774368	0.0458106	LHX3,4.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr16_+_21689834_21689837	0.0457818	LHX3,4.p2	BC129993|OTOA|146183|otoancorin	NM_144672|OTOA|146183|otoancorin	BC129992|OTOA|146183|otoancorin
hg19_v1_chr2_-_101925051_101925234	0.045556	LHX3,4.p2	AM392566|RNF149|284996|ring finger protein 149	BC019355|RNF149|284996|ring finger protein 149	BC032328|RNF149|284996|ring finger protein 149	AK074985|RNF149|284996|ring finger protein 149	AK075141|RNF149|284996|ring finger protein 149	AY450390|RNF149|284996|ring finger protein 149	BC045743|RNF149|284996|ring finger protein 149	AK129799|RNF149|284996|ring finger protein 149	NM_173647|RNF149|284996|ring finger protein 149
hg19_v1_chr4_+_159442865_159443128	0.0454681	LHX3,4.p2	NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1
hg19_v1_chr6_+_167525294_167525294	0.0448154	LHX3,4.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chr7_+_138818489_138818567	0.0447592	LHX3,4.p2	NM_001144920|TTC26|79989|tetratricopeptide repeat domain 26	NM_001144923|TTC26|79989|tetratricopeptide repeat domain 26	NM_024926|TTC26|79989|tetratricopeptide repeat domain 26	AK295092|TTC26|79989|tetratricopeptide repeat domain 26	AK022633|TTC26|79989|tetratricopeptide repeat domain 26	AK300807|TTC26|79989|tetratricopeptide repeat domain 26	BC013912|TTC26|79989|tetratricopeptide repeat domain 26	AL137393|TTC26|79989|tetratricopeptide repeat domain 26	AK299132|TTC26|79989|tetratricopeptide repeat domain 26	BC034466|TTC26|79989|tetratricopeptide repeat domain 26	BC126331|TTC26|79989|tetratricopeptide repeat domain 26	BC130339|TTC26|79989|tetratricopeptide repeat domain 26	BC144151|TTC26|79989|tetratricopeptide repeat domain 26	AK293444|TTC26|79989|tetratricopeptide repeat domain 26
hg19_v1_chr6_+_129204285_129204341	0.0443419	LHX3,4.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg19_v1_chrX_+_36254050_36254050	0.0441151	LHX3,4.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg19_v1_chr2_-_65159566_65159589	0.0439819	LHX3,4.p2	BC037562|LOC400958|400958|uncharacterized LOC400958
hg19_v1_chr3_-_33700932_33701071	0.0430951	LHX3,4.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr11_-_26593667_26593814	0.0429124	LHX3,4.p2	AK128337|MUC15|143662|mucin 15, cell surface associated	AJ417818|MUC15|143662|mucin 15, cell surface associated	AJ507429|MUC15|143662|mucin 15, cell surface associated	BC058007|MUC15|143662|mucin 15, cell surface associated	AY358668|MUC15|143662|mucin 15, cell surface associated	BC020912|MUC15|143662|mucin 15, cell surface associated	NM_001135091|MUC15|143662|mucin 15, cell surface associated	NM_001135092|MUC15|143662|mucin 15, cell surface associated	NM_145650|MUC15|143662|mucin 15, cell surface associated
hg19_v1_chr18_+_29027731_29027757	0.0417762	LHX3,4.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr10_-_27529263_27529825	0.0413308	LHX3,4.p2	AK295031|ACBD5|91452|acyl-CoA binding domain containing 5	AK304842|ACBD5|91452|acyl-CoA binding domain containing 5	BC025309|ACBD5|91452|acyl-CoA binding domain containing 5	BC030555|ACBD5|91452|acyl-CoA binding domain containing 5	BC011364|ACBD5|91452|acyl-CoA binding domain containing 5	AK294510|ACBD5|91452|acyl-CoA binding domain containing 5	NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5
hg19_v1_chr1_+_160175114_160175144	0.0403403	LHX3,4.p2	NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15	BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15
hg19_v1_chr17_-_67240955_67240986	0.0399924	LHX3,4.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg19_v1_chr7_+_23286401_23286410	0.0397434	LHX3,4.p2	AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr21_+_34442446_34442458	0.0391412	LHX3,4.p2	BC033290|OLIG1|116448|oligodendrocyte transcription factor 1	NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1	AL834450|OLIG1|116448|oligodendrocyte transcription factor 1	AB209791|OLIG1|116448|oligodendrocyte transcription factor 1
hg19_v1_chr4_+_70796798_70796819	0.0389946	LHX3,4.p2	NM_001025104|CSN1S1|1446|casein alpha s1	NM_001890|CSN1S1|1446|casein alpha s1	X78416|CSN1S1|1446|casein alpha s1	BC128227|CSN1S1|1446|casein alpha s1	BC128228|CSN1S1|1446|casein alpha s1	U23157|CSN1S1|1446|casein alpha s1
hg19_v1_chr8_-_7287651_7287686	0.0381364	LHX3,4.p2	AF217245|DEFB103B|55894|defensin, beta 103B	AF516673|DEFB103B|55894|defensin, beta 103B	AB037972|DEFB103B|55894|defensin, beta 103B	AJ237673|DEFB103B|55894|defensin, beta 103B	NM_018661|DEFB103B|55894|defensin, beta 103B	AF295370|DEFB103B|55894|defensin, beta 103B
hg19_v1_chr6_-_24877453_24877582	0.0374213	LHX3,4.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg19_v1_chr1_+_248201473_248201473	0.0373839	LHX3,4.p2	BC104792|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2	BC104794|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2	NM_001004686|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2
hg19_v1_chr14_+_45366426_45366571	0.0368836	LHX3,4.p2	NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28	BC105030|C14orf28|122525|chromosome 14 open reading frame 28	BC105032|C14orf28|122525|chromosome 14 open reading frame 28	AF250395|C14orf28|122525|chromosome 14 open reading frame 28
hg19_v1_chr14_-_35099296_35099415	0.0366625	LHX3,4.p2	BC001798|SNX6|58533|sorting nexin 6	NM_021249|SNX6|58533|sorting nexin 6	U83194|SNX6|58533|sorting nexin 6	AF121856|SNX6|58533|sorting nexin 6	AK292250|SNX6|58533|sorting nexin 6	AK308464|SNX6|58533|sorting nexin 6	AK296213|SNX6|58533|sorting nexin 6	NM_152233|SNX6|58533|sorting nexin 6
hg19_v1_chr5_+_132432880_132432902	0.0366039	LHX3,4.p2	AK315862|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr12_+_18414473_18414473	0.0365535	LHX3,4.p2	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide
hg19_v1_chr12_-_108991893_108991924	0.035675	LHX3,4.p2	AY358389|TMEM119|338773|transmembrane protein 119	NM_181724|TMEM119|338773|transmembrane protein 119
hg19_v1_chr13_-_49975734_49975734	0.0356318	LHX3,4.p2	NM_030925|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr8_-_95220769_95220819	0.0354303	LHX3,4.p2	U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)
hg19_v1_chr10_+_75532252_75532321	0.0352557	LHX3,4.p2	AK095482|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
hg19_v1_chrX_+_37639246_37639294	0.034979	LHX3,4.p2	NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide	AK289753|CYBB|1536|cytochrome b-245, beta polypeptide	BC032720|CYBB|1536|cytochrome b-245, beta polypeptide
hg19_v1_chr17_-_18177716_18177777	0.0348408	LHX3,4.p2	AF086042|TOP3A|7156|topoisomerase (DNA) III alpha
hg19_v1_chr16_-_30103204_30103290	0.0348111	LHX3,4.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr9_+_90497740_90497775	0.0339426	LHX3,4.p2	AK093206|C9orf79|286234|chromosome 9 open reading frame 79	AK125845|C9orf79|286234|chromosome 9 open reading frame 79	NM_178828|C9orf79|286234|chromosome 9 open reading frame 79	BC137349|C9orf79|286234|chromosome 9 open reading frame 79
hg19_v1_chr1_-_216896640_216896813	0.033822	LHX3,4.p2	HQ692853|ESRRG|2104|estrogen-related receptor gamma	AF117255|ESRRG|2104|estrogen-related receptor gamma	BC008218|ESRRG|2104|estrogen-related receptor gamma	AY388456|ESRRG|2104|estrogen-related receptor gamma	AK291647|ESRRG|2104|estrogen-related receptor gamma	AB020639|ESRRG|2104|estrogen-related receptor gamma	AK290945|ESRRG|2104|estrogen-related receptor gamma	BC064700|ESRRG|2104|estrogen-related receptor gamma	NM_001243515|ESRRG|2104|estrogen-related receptor gamma	NM_001243518|ESRRG|2104|estrogen-related receptor gamma	NM_001243519|ESRRG|2104|estrogen-related receptor gamma	NM_001438|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr11_-_8964579_8964579	0.033649	LHX3,4.p2	NM_020646|ASCL3|56676|achaete-scute complex homolog 3 (Drosophila)
hg19_v1_chr10_-_120938276_120938331	0.0336173	LHX3,4.p2	EF036492|PRDX3|10935|peroxiredoxin 3	BT020007|PRDX3|10935|peroxiredoxin 3	CR450344|PRDX3|10935|peroxiredoxin 3	AK222659|PRDX3|10935|peroxiredoxin 3	BC002685|PRDX3|10935|peroxiredoxin 3	D49396|PRDX3|10935|peroxiredoxin 3	BC009601|PRDX3|10935|peroxiredoxin 3	BC059169|PRDX3|10935|peroxiredoxin 3	BC111397|PRDX3|10935|peroxiredoxin 3	AK313169|PRDX3|10935|peroxiredoxin 3	BC008435|PRDX3|10935|peroxiredoxin 3	BC022373|PRDX3|10935|peroxiredoxin 3	AK130897|PRDX3|10935|peroxiredoxin 3	BC007062|PRDX3|10935|peroxiredoxin 3
hg19_v1_chrX_-_19988381_19988381	0.0328949	LHX3,4.p2	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg19_v1_chr6_+_134273307_134273422	0.0328551	LHX3,4.p2	NM_001253676|TBPL1|9519|TBP-like 1	AK292320|TBPL1|9519|TBP-like 1
hg19_v1_chr1_-_205391180_205391213	0.0325048	LHX3,4.p2	AB084764|LEMD1|93273|LEM domain containing 1	AB084765|LEMD1|93273|LEM domain containing 1	AB085610|LEMD1|93273|LEM domain containing 1	AB096677|LEMD1|93273|LEM domain containing 1	AB096678|LEMD1|93273|LEM domain containing 1	AB096679|LEMD1|93273|LEM domain containing 1	AB096680|LEMD1|93273|LEM domain containing 1	AB096681|LEMD1|93273|LEM domain containing 1	AB096682|LEMD1|93273|LEM domain containing 1	BC036636|LEMD1|93273|LEM domain containing 1	AK302392|LEMD1|93273|LEM domain containing 1	NM_001001552|LEMD1|93273|LEM domain containing 1	NM_001199050|LEMD1|93273|LEM domain containing 1	NM_001199051|LEMD1|93273|LEM domain containing 1	NM_001199052|LEMD1|93273|LEM domain containing 1
hg19_v1_chr22_-_41842432_41842479	0.0322477	LHX3,4.p2	CR456594|TOB2|10766|transducer of ERBB2, 2
hg19_v1_chr14_-_50697940_50698026	0.0321017	LHX3,4.p2	L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)	HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg19_v1_chrM_+_10123_10283	0.0317393	LHX3,4.p2	
hg19_v1_chr6_+_28193028_28193116	0.0313185	LHX3,4.p2	NM_001199479|ZNF193|7746|zinc finger protein 193	NM_001199480|ZNF193|7746|zinc finger protein 193	NM_006299|ZNF193|7746|zinc finger protein 193	AK304013|ZNF193|7746|zinc finger protein 193	BC010374|ZNF193|7746|zinc finger protein 193	AK226035|ZNF193|7746|zinc finger protein 193	AY261373|ZNF193|7746|zinc finger protein 193	U62392|ZNF193|7746|zinc finger protein 193
hg19_v1_chr8_-_27101240_27101316	0.0308288	LHX3,4.p2	DQ891040|STMN4|81551|stathmin-like 4	DQ894219|STMN4|81551|stathmin-like 4	AJ303455|STMN4|81551|stathmin-like 4
hg19_v1_chr3_+_97887543_97887543	0.0308157	LHX3,4.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg19_v1_chr18_-_51750934_51750997	0.0308026	LHX3,4.p2	BC032638|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr11_-_102595623_102595684	0.0306583	LHX3,4.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg19_v1_chr7_-_28220342_28220470	0.0305015	LHX3,4.p2	AK091311|JAZF1|221895|JAZF zinc finger 1	NM_175061|JAZF1|221895|JAZF zinc finger 1
hg19_v1_chr6_+_96969669_96969729	0.0297139	LHX3,4.p2	NM_015323|UFL1|23376|UFM1-specific ligase 1	BC015377|UFL1|23376|UFM1-specific ligase 1	AK307651|UFL1|23376|UFM1-specific ligase 1	BC036379|UFL1|23376|UFM1-specific ligase 1	BC028608|UFL1|23376|UFM1-specific ligase 1
hg19_v1_chr6_-_52774460_52774495	0.0295731	LHX3,4.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg19_v1_chr2_+_211342405_211342432	0.0295595	LHX3,4.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr19_-_57678855_57678855	0.0293482	LHX3,4.p2	NM_001012729|DUXA|503835|double homeobox A
hg19_v1_chr3_+_69812620_69812706	0.0277482	LHX3,4.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr11_+_107461807_107461816	0.0265303	LHX3,4.p2	AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1
hg19_v1_chr15_-_42749710_42749764	0.0262761	LHX3,4.p2	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)	NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg19_v1_chr15_+_91411884_91411884	0.0257985	LHX3,4.p2	NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)	X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)
hg19_v1_chr15_-_51397472_51397472	0.025755	LHX3,4.p2	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3
hg19_v1_chr3_-_147124595_147124595	0.0255614	LHX3,4.p2	NM_001243256|ZIC4|84107|Zic family member 4	NM_032153|ZIC4|84107|Zic family member 4
hg19_v1_chr3_+_159943252_159943422	0.02521	LHX3,4.p2	NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80
hg19_v1_chr1_-_60539425_60539441	0.0251451	LHX3,4.p2	BC027878|C1orf87|127795|chromosome 1 open reading frame 87	AK124828|C1orf87|127795|chromosome 1 open reading frame 87	NM_152377|C1orf87|127795|chromosome 1 open reading frame 87
hg19_v1_chr16_+_69680959_69681070	0.0248704	LHX3,4.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v1_chrY_+_4924128_4924130	0.0245844	LHX3,4.p2	AJ564959|PCDH11X|27328|protocadherin 11 X-linked	AF332216|PCDH11Y|83259|protocadherin 11 Y-linked	AF332217|PCDH11Y|83259|protocadherin 11 Y-linked	NM_032972|PCDH11Y|83259|protocadherin 11 Y-linked	NM_032973|PCDH11Y|83259|protocadherin 11 Y-linked
hg19_v1_chr7_+_95115212_95115374	0.0243358	LHX3,4.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr3_-_97754147_97754147	0.0241417	LHX3,4.p2	CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg19_v1_chr2_-_163695239_163695256	0.0239405	LHX3,4.p2	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v1_chr5_+_147582338_147582403	0.023673	LHX3,4.p2	GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6
hg19_v1_chr12_-_8219001_8219032	0.0235024	LHX3,4.p2	U62027|C3AR1|719|complement component 3a receptor 1
hg19_v1_chr20_+_5986761_5986892	0.0234112	LHX3,4.p2	BC069010|CRLS1|54675|cardiolipin synthase 1	DQ386730|CRLS1|54675|cardiolipin synthase 1
hg19_v1_chr4_+_26322627_26322646	0.0233134	LHX3,4.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr19_-_53758107_53758139	0.0233111	LHX3,4.p2	BC050038|ZNF677|342926|zinc finger protein 677	NM_182609|ZNF677|342926|zinc finger protein 677	AK308120|ZNF677|342926|zinc finger protein 677	BX648243|ZNF677|342926|zinc finger protein 677
hg19_v1_chr5_+_126988706_126988745	0.0222444	LHX3,4.p2	NM_001127385|CTXN3|613212|cortexin 3	AB219832|CTXN3|613212|cortexin 3	BC071790|CTXN3|613212|cortexin 3
hg19_v1_chrM_+_5769_6092	0.0211502	LHX3,4.p2	
hg19_v1_chr11_-_35278749_35278902	0.0198176	LHX3,4.p2	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr20_+_30697512_30697570	0.01956	LHX3,4.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr8_+_92114846_92114872	0.0192637	LHX3,4.p2	AK097393|LRRC69|100130742|leucine rich repeat containing 69	NM_001129890|LRRC69|100130742|leucine rich repeat containing 69	AK130865|LRRC69|100130742|leucine rich repeat containing 69
hg19_v1_chrX_+_14547419_14547482	0.0192509	LHX3,4.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg19_v1_chr5_+_55147206_55147333	0.0186716	LHX3,4.p2	AY358740|IL31RA|133396|interleukin 31 receptor A	NM_001242637|IL31RA|133396|interleukin 31 receptor A	NM_001242638|IL31RA|133396|interleukin 31 receptor A	NM_139017|IL31RA|133396|interleukin 31 receptor A	AK297938|IL31RA|133396|interleukin 31 receptor A	AY499342|IL31RA|133396|interleukin 31 receptor A	AY499339|IL31RA|133396|interleukin 31 receptor A	AY499340|IL31RA|133396|interleukin 31 receptor A	AY499341|IL31RA|133396|interleukin 31 receptor A
hg19_v1_chr2_-_211179765_211179913	0.0186354	LHX3,4.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg19_v1_chrX_+_57618268_57618268	0.0186217	LHX3,4.p2	NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B
hg19_v1_chr7_+_110731061_110731185	0.0184692	LHX3,4.p2	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3	NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3	NM_018334|LRRN3|54674|leucine rich repeat neuronal 3	AK001991|LRRN3|54674|leucine rich repeat neuronal 3	BC035133|LRRN3|54674|leucine rich repeat neuronal 3
hg19_v1_chr6_+_79787548_79787573	0.0178678	LHX3,4.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr9_+_124329398_124329398	0.0175466	LHX3,4.p2	NM_032552|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chr13_-_41593491_41593507	0.0174387	LHX3,4.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr17_-_27332888_27333162	0.0173638	LHX3,4.p2	AK125377|SEZ6|124925|seizure related 6 homolog (mouse)	AK223620|SEZ6|124925|seizure related 6 homolog (mouse)	AY038048|SEZ6|124925|seizure related 6 homolog (mouse)	NM_001098635|SEZ6|124925|seizure related 6 homolog (mouse)	NM_178860|SEZ6|124925|seizure related 6 homolog (mouse)	AF502129|SEZ6|124925|seizure related 6 homolog (mouse)	AF502130|SEZ6|124925|seizure related 6 homolog (mouse)
hg19_v1_chr8_+_42552561_42552689	0.0171427	LHX3,4.p2	BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3
hg19_v1_chr1_-_217113007_217113016	0.0167074	LHX3,4.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr3_-_71778268_71778268	0.016677	LHX3,4.p2	NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg19_v1_chr14_-_44976452_44976498	0.0166186	LHX3,4.p2	AK302615|FSCB|84075|fibrous sheath CABYR binding protein	CR933626|FSCB|84075|fibrous sheath CABYR binding protein	BC039878|FSCB|84075|fibrous sheath CABYR binding protein	CR933608|FSCB|84075|fibrous sheath CABYR binding protein	AK124110|FSCB|84075|fibrous sheath CABYR binding protein	NM_032135|FSCB|84075|fibrous sheath CABYR binding protein
hg19_v1_chr4_+_56815036_56815146	0.0165452	LHX3,4.p2	AK023683|CEP135|9662|centrosomal protein 135kDa	NM_025009|CEP135|9662|centrosomal protein 135kDa	BC136535|CEP135|9662|centrosomal protein 135kDa	BC136536|CEP135|9662|centrosomal protein 135kDa
hg19_v1_chr12_-_10962673_10962766	0.016355	LHX3,4.p2	BC069066|TAS2R9|50835|taste receptor, type 2, member 9	BC095519|TAS2R9|50835|taste receptor, type 2, member 9	NM_023917|TAS2R9|50835|taste receptor, type 2, member 9
hg19_v1_chr4_+_187148624_187148712	0.0163547	LHX3,4.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg19_v1_chrX_+_140096760_140096863	0.0163467	LHX3,4.p2	AF098307|SPANXB1|728695|SPANX family, member B1	AJ457796|SPANXF1|171490|SPANX family, member F1	NM_032461|SPANXB1|728695|SPANX family, member B1	NM_139019|SPANXF1|171490|SPANX family, member F1	NM_145664|SPANXB2|100133171|SPANX family, member B2	BC034472|SPANXB1|728695|SPANX family, member B1	BC137533|SPANXB1|728695|SPANX family, member B1	BC137536|SPANXB1|728695|SPANX family, member B1	DQ892330|SPANXB1|728695|SPANX family, member B1	DQ895534|SPANXB1|728695|SPANX family, member B1
hg19_v1_chrX_+_24167728_24167857	0.0156891	LHX3,4.p2	AB209892|ZFX|7543|zinc finger protein, X-linked	NM_001178086|ZFX|7543|zinc finger protein, X-linked	NM_001178095|ZFX|7543|zinc finger protein, X-linked	X59738|ZFX|7543|zinc finger protein, X-linked	NM_001178084|ZFX|7543|zinc finger protein, X-linked	NM_001178085|ZFX|7543|zinc finger protein, X-linked	NM_003410|ZFX|7543|zinc finger protein, X-linked
hg19_v1_chr20_+_58571416_58571428	0.0155937	LHX3,4.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg19_v1_chr15_-_49103183_49103342	0.0152055	LHX3,4.p2	BC117182|CEP152|22995|centrosomal protein 152kDa	AB020719|CEP152|22995|centrosomal protein 152kDa	BC069186|CEP152|22995|centrosomal protein 152kDa	AK303805|CEP152|22995|centrosomal protein 152kDa	BX648822|CEP152|22995|centrosomal protein 152kDa	BC107721|CEP152|22995|centrosomal protein 152kDa	NM_001194998|CEP152|22995|centrosomal protein 152kDa	NM_014985|CEP152|22995|centrosomal protein 152kDa
hg19_v1_chr1_+_24840800_24840918	0.0151527	LHX3,4.p2	HQ317426|RCAN3|11123|RCAN family member 3	JN203053|RCAN3|11123|RCAN family member 3	NM_001251980|RCAN3|11123|RCAN family member 3	NM_001251982|RCAN3|11123|RCAN family member 3	NM_001251985|RCAN3|11123|RCAN family member 3	EF467309|RCAN3|11123|RCAN family member 3	EF431960|RCAN3|11123|RCAN family member 3	EF529733|RCAN3|11123|RCAN family member 3	AF176116|RCAN3|11123|RCAN family member 3	AY906854|RCAN3|11123|RCAN family member 3	DQ892434|RCAN3|11123|RCAN family member 3	DQ895645|RCAN3|11123|RCAN family member 3	AF176117|RCAN3|11123|RCAN family member 3
hg19_v1_chr14_-_24683035_24683035	0.0146491	LHX3,4.p2	BC113533|CHMP4A|29082|charged multivesicular body protein 4A	BC113535|CHMP4A|29082|charged multivesicular body protein 4A	BC143834|CHMP4A|29082|charged multivesicular body protein 4A	NM_014169|CHMP4A|29082|charged multivesicular body protein 4A
hg19_v1_chr10_-_120938337_120938357	0.0136775	LHX3,4.p2	BC021691|PRDX3|10935|peroxiredoxin 3	NM_006793|PRDX3|10935|peroxiredoxin 3	NM_014098|PRDX3|10935|peroxiredoxin 3
hg19_v1_chrX_+_37639306_37639325	0.0133688	LHX3,4.p2	AK304033|CYBB|1536|cytochrome b-245, beta polypeptide	AK301491|CYBB|1536|cytochrome b-245, beta polypeptide	AK312929|CYBB|1536|cytochrome b-245, beta polypeptide	AK301476|CYBB|1536|cytochrome b-245, beta polypeptide	X04011|CYBB|1536|cytochrome b-245, beta polypeptide	DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide	DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide
hg19_v1_chr19_-_53662279_53662321	0.0132471	LHX3,4.p2	BC002938|ZNF347|84671|zinc finger protein 347	BC015611|ZNF347|84671|zinc finger protein 347	AY029765|ZNF347|84671|zinc finger protein 347	AK289994|ZNF347|84671|zinc finger protein 347	AK314603|ZNF347|84671|zinc finger protein 347	AK096623|ZNF347|84671|zinc finger protein 347	NM_001172674|ZNF347|84671|zinc finger protein 347	NM_001172675|ZNF347|84671|zinc finger protein 347	NM_032584|ZNF347|84671|zinc finger protein 347
hg19_v1_chr22_+_46731297_46731321	0.0130342	LHX3,4.p2	NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v1_chr1_+_186265404_186265410	0.0127324	LHX3,4.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg19_v1_chr11_+_65769409_65769549	0.0124214	LHX3,4.p2	AF068235|BANF1|8815|barrier to autointegration factor 1	NM_001143985|BANF1|8815|barrier to autointegration factor 1	NM_003860|BANF1|8815|barrier to autointegration factor 1
hg19_v1_chr12_-_54758228_54758272	0.0120198	LHX3,4.p2	AF237762|GPR84|53831|G protein-coupled receptor 84	AF282693|GPR84|53831|G protein-coupled receptor 84	BC020614|GPR84|53831|G protein-coupled receptor 84	NM_020370|GPR84|53831|G protein-coupled receptor 84	AK290394|GPR84|53831|G protein-coupled receptor 84
hg19_v1_chr17_-_45266536_45266621	0.0119523	LHX3,4.p2	DQ892780|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	DQ896027|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	BC011656|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	DQ786193|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	U00001|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	AK296881|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	S78234|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)
hg19_v1_chr9_-_34620489_34620497	0.0116682	LHX3,4.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chrX_+_37892786_37892786	0.0116421	LHX3,4.p2	NM_001163334|SYTL5|94122|synaptotagmin-like 5
hg19_v1_chr11_+_128563772_128563824	0.0115696	LHX3,4.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr4_+_123161119_123161129	0.0111571	LHX3,4.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr18_+_61254533_61254662	0.0109285	LHX3,4.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg19_v1_chr10_+_64133915_64134171	0.0109029	LHX3,4.p2	NM_014951|ZNF365|22891|zinc finger protein 365	NM_199450|ZNF365|22891|zinc finger protein 365	NM_199451|ZNF365|22891|zinc finger protein 365	AB020651|ZNF365|22891|zinc finger protein 365	AJ505148|ZNF365|22891|zinc finger protein 365	AJ505149|ZNF365|22891|zinc finger protein 365	BC035049|ZNF365|22891|zinc finger protein 365	BC060817|ZNF365|22891|zinc finger protein 365	BC017841|ZNF365|22891|zinc finger protein 365	BC070073|ZNF365|22891|zinc finger protein 365	AJ505147|ZNF365|22891|zinc finger protein 365	AK289808|ZNF365|22891|zinc finger protein 365	AK289515|ZNF365|22891|zinc finger protein 365
hg19_v1_chr19_+_52839497_52839610	0.0108278	LHX3,4.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg19_v1_chr17_-_45266627_45266651	0.0107448	LHX3,4.p2	AK299342|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)
hg19_v1_chr2_+_32502988_32503072	0.0107378	LHX3,4.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr10_+_18689512_18689615	0.0104323	LHX3,4.p2	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr17_+_74463629_74463686	0.0103428	LHX3,4.p2	NM_001088|AANAT|15|aralkylamine N-acetyltransferase	U40347|AANAT|15|aralkylamine N-acetyltransferase	AB593119|AANAT|15|aralkylamine N-acetyltransferase	BC069434|AANAT|15|aralkylamine N-acetyltransferase
hg19_v1_chr10_+_47746919_47747111	0.0101881	LHX3,4.p2	NM_001630|ANXA8L2|244|annexin A8-like 2	BC008813|ANXA8L2|244|annexin A8-like 2	BC073755|ANXA8|653145|annexin A8	AK313626|ANXA8L2|244|annexin A8-like 2	X16662|ANXA8L2|244|annexin A8-like 2	AK300191|ANXA8L2|244|annexin A8-like 2	AK223149|ANXA8L2|244|annexin A8-like 2
hg19_v1_chr2_+_32502971_32502978	0.00944881	LHX3,4.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr1_+_214776582_214776655	0.00943396	LHX3,4.p2	U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)
hg19_v1_chr3_-_113897849_113897983	0.00842808	LHX3,4.p2	AY228457|DRD3|1814|dopamine receptor D3	AY228458|DRD3|1814|dopamine receptor D3	NM_000796|DRD3|1814|dopamine receptor D3	NM_033663|DRD3|1814|dopamine receptor D3	AY228454|DRD3|1814|dopamine receptor D3
hg19_v1_chr20_+_2083418_2083613	0.00822299	LHX3,4.p2	BC140883|STK35|140901|serine/threonine kinase 35	BC140884|STK35|140901|serine/threonine kinase 35	AF195026|STK35|140901|serine/threonine kinase 35	BC111573|STK35|140901|serine/threonine kinase 35	BC017340|STK35|140901|serine/threonine kinase 35	AK302629|STK35|140901|serine/threonine kinase 35
hg19_v1_chr18_-_51750998_51751157	0.00794403	LHX3,4.p2	AF072242|MBD2|8932|methyl-CpG binding domain protein 2	NM_003927|MBD2|8932|methyl-CpG binding domain protein 2	NM_015832|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr10_+_48255223_48255428	0.00682397	LHX3,4.p2	AK298761|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	Z36830|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	X16662|ANXA8L2|244|annexin A8-like 2	AK300158|ANXA8|653145|annexin A8	AK223149|ANXA8L2|244|annexin A8-like 2	AK296573|ANXA8|653145|annexin A8	AK300139|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8
hg19_v1_chr8_+_17822093_17822128	0.00600153	LHX3,4.p2	AF068293|PCM1|5108|pericentriolar material 1
hg19_v1_chr1_-_211307314_211307456	0.00592869	LHX3,4.p2	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1
hg19_v1_chr17_-_45266664_45266705	0.00571362	LHX3,4.p2	NM_001114091|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	NM_001256|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)
hg19_v1_chr4_-_113437327_113437337	0.00568932	LHX3,4.p2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg19_v1_chr9_+_125133322_125133363	0.0055593	LHX3,4.p2	AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v1_chr22_+_22712091_22712390	0.00525954	LHX3,4.p2	BC030984|IGLV1-44|28823|immunoglobulin lambda variable 1-44	DQ892642|IGL@|3535|immunoglobulin lambda locus	DQ895879|IGL@|3535|immunoglobulin lambda locus	U96394|IGLV1-44|28823|immunoglobulin lambda variable 1-44
hg19_v1_chr9_-_21305311_21305311	0.00525119	LHX3,4.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr5_+_57787260_57787329	0.00496755	LHX3,4.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg19_v1_chr3_+_51575595_51575595	0.00494244	LHX3,4.p2	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)	NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)
hg19_v1_chr1_-_163113938_163114171	0.0048697	LHX3,4.p2	AK026775|RGS5|8490|regulator of G-protein signaling 5	AF113212|RGS5|8490|regulator of G-protein signaling 5	AF176919|RGS5|8490|regulator of G-protein signaling 5	AF172821|RGS5|8490|regulator of G-protein signaling 5
hg19_v1_chr19_+_49199227_49199295	0.00440743	LHX3,4.p2	NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)	NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)	AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)	D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)
hg19_v1_chr13_-_46626845_46626921	0.00424772	LHX3,4.p2	BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13	AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13	AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13	NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13
hg19_v1_chr6_+_47749774_47749802	0.00412551	LHX3,4.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5	HQ258199|OPN5|221391|opsin 5
hg19_v1_chrX_+_49091979_49092095	0.00365888	LHX3,4.p2	BC000972|CCDC22|28952|coiled-coil domain containing 22	AK316375|CCDC22|28952|coiled-coil domain containing 22	AJ005890|CCDC22|28952|coiled-coil domain containing 22	DQ894170|CCDC22|28952|coiled-coil domain containing 22	EU176573|CCDC22|28952|coiled-coil domain containing 22	BC011675|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr15_+_68346655_68346667	0.00352812	LHX3,4.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg19_v1_chr8_-_42623928_42623928	0.00350408	LHX3,4.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr18_+_21269528_21269647	0.00317416	LHX3,4.p2	BC093406|LAMA3|3909|laminin, alpha 3	NM_001127717|LAMA3|3909|laminin, alpha 3	NM_198129|LAMA3|3909|laminin, alpha 3	AY327115|LAMA3|3909|laminin, alpha 3	AY327116|LAMA3|3909|laminin, alpha 3
hg19_v1_chr1_+_244214552_244214560	0.00295691	LHX3,4.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr14_-_106539099_106539580	0.00295548	LHX3,4.p2	BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1	BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg19_v1_chrX_+_65384078_65384206	0.00286867	LHX3,4.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr19_-_3772208_3772218	0.00277959	LHX3,4.p2	AY211277|RAX2|84839|retina and anterior neural fold homeobox 2	BC007284|RAX2|84839|retina and anterior neural fold homeobox 2	BC018709|RAX2|84839|retina and anterior neural fold homeobox 2	BC032512|RAX2|84839|retina and anterior neural fold homeobox 2	NM_032753|RAX2|84839|retina and anterior neural fold homeobox 2
hg19_v1_chr6_-_26108320_26108364	0.00206694	LHX3,4.p2	EU446962|HIST1H1T|3010|histone cluster 1, H1t	HQ258096|HIST1H1T|3010|histone cluster 1, H1t	BC130350|HIST1H1T|3010|histone cluster 1, H1t	BC069517|HIST1H1T|3010|histone cluster 1, H1t	NM_005323|HIST1H1T|3010|histone cluster 1, H1t
hg19_v1_chr3_+_73110809_73110809	0.000953978	LHX3,4.p2	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2
hg19_v1_chr19_+_15838833_15838853	0.000624647	LHX3,4.p2	BC112178|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC113647|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	NM_013939|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	HQ258140|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069085|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069457|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2
hg19_v1_chr11_-_128807712_128807788	0.000162892	LHX3,4.p2	AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1
