hg19_v1_chr1_+_84647342_84647342	10.4897	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr4_-_101439071_101439249	8.18377	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg19_v1_chr4_-_186732047_186732047	7.30606	SOX2.p2	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr3_-_149051258_149051547	5.6391	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg19_v1_chr4_-_186732208_186732224	5.21536	SOX2.p2	BC011883|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145671|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr1_+_61547388_61547533	4.86366	SOX2.p2	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg19_v1_chr2_-_188312872_188313020	4.61644	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg19_v1_chr6_-_130031278_130031375	4.5318	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg19_v1_chr8_-_80993009_80993050	4.2351	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr1_+_100111430_100111704	3.93598	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin
hg19_v1_chr17_-_67138013_67138137	3.77715	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v1_chr7_-_11871735_11871844	3.53721	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chr4_+_41614933_41615091	3.4946	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr4_+_41614725_41614803	3.45919	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr4_+_41614911_41614927	3.39119	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chrX_+_86772714_86772896	3.20166	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg19_v1_chr4_+_41540187_41540224	3.13175	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr5_-_88199868_88199921	3.07526	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr1_+_61547625_61548491	2.9655	SOX2.p2	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg19_v1_chr4_+_41540320_41540334	2.8037	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr2_+_12857885_12857947	2.7131	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chr12_+_20724797_20724797	2.63236	SOX2.p2	AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited
hg19_v1_chr1_+_84768333_84768333	2.60856	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg19_v1_chr7_+_102553343_102553521	2.58756	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg19_v1_chr2_+_12856813_12857693	2.57732	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chr5_-_111091947_111091947	2.49529	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_61869699_61869747	2.48183	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg19_v1_chr2_-_111230651_111230651	2.38808	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr18_+_42260774_42260963	2.36843	SOX2.p2	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg19_v1_chr2_+_110656008_110656008	2.33092	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr6_-_32163890_32163924	2.23562	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg19_v1_chr18_+_72922725_72922765	2.19958	SOX2.p2	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1
hg19_v1_chr2_-_157189040_157189286	2.12681	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg19_v1_chr8_-_17579729_17579729	2.11265	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr1_+_84630575_84630648	2.02992	SOX2.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr15_-_82338348_82338385	2.02033	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr15_-_82338459_82338494	1.94613	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr17_+_65822242_65822257	1.93322	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr2_+_33359607_33359804	1.9191	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg19_v1_chr9_-_14313509_14313718	1.91013	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg19_v1_chr8_-_93029864_93029907	1.90484	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr17_+_65822206_65822229	1.89605	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr9_-_14313899_14313907	1.87475	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg19_v1_chr12_+_53443834_53443966	1.84687	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr2_-_165424993_165425016	1.84207	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg19_v1_chrX_+_100333835_100333871	1.83489	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg19_v1_chr6_-_76203256_76203497	1.81455	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg19_v1_chr9_-_14086901_14087003	1.75965	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg19_v1_chr8_-_93107442_93107489	1.74482	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr21_+_18885104_18885223	1.74378	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr2_+_109271484_109271492	1.69294	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr13_-_72440143_72440375	1.6721	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg19_v1_chr9_-_14398981_14398981	1.66186	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chr2_-_75788027_75788067	1.63909	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr1_+_84630014_84630064	1.6348	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chrX_+_80457302_80457504	1.63341	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr7_+_150690838_150690891	1.62319	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr1_-_153029987_153029987	1.60444	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg19_v1_chr1_-_182357757_182357770	1.59542	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr2_-_70475563_70475875	1.58007	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v1_chr17_+_39382878_39382907	1.57536	SOX2.p2	BC117287|KRTAP9-2|83899|keratin associated protein 9-2	BC110619|KRTAP9-2|83899|keratin associated protein 9-2	AJ406946|KRTAP9-2|83899|keratin associated protein 9-2	NM_031961|KRTAP9-2|83899|keratin associated protein 9-2	BC069560|KRTAP9-2|83899|keratin associated protein 9-2
hg19_v1_chr3_-_66024508_66024518	1.57518	SOX2.p2	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v1_chrX_+_80457559_80457593	1.57185	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr3_-_168864325_168864399	1.56392	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr11_-_71752099_71752188	1.54385	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr18_-_22932109_22932217	1.541	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr9_+_91003987_91004010	1.5277	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chr5_-_39424930_39424973	1.52445	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr18_-_53177999_53177999	1.48449	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr5_-_88119604_88119743	1.4778	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr10_+_35464514_35464549	1.46415	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chr19_-_17375522_17375572	1.46364	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg19_v1_chr2_-_136873740_136873857	1.46338	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg19_v1_chr12_+_93963597_93963597	1.45964	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg19_v1_chr12_+_53442732_53442789	1.45504	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr21_+_18885296_18885447	1.42979	SOX2.p2	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chrX_+_80457597_80457699	1.41988	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr7_+_16793320_16793592	1.40734	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg19_v1_chr1_+_87797371_87797459	1.39991	SOX2.p2	BC065818|LMO4|8543|LIM domain only 4
hg19_v1_chr3_+_134514044_134514259	1.39147	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg19_v1_chr5_-_39425030_39425098	1.38786	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr5_-_111092918_111092954	1.38759	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr20_-_39317875_39317880	1.38319	SOX2.p2	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg19_v1_chr20_+_42543417_42543557	1.33937	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg19_v1_chr10_+_35416089_35416182	1.32559	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg19_v1_chr3_+_151986731_151986754	1.32089	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg19_v1_chr13_-_99630243_99630337	1.32077	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chrX_-_99891690_99891847	1.31299	SOX2.p2	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg19_v1_chr12_-_9268513_9268520	1.30931	SOX2.p2	BC026246|A2M|2|alpha-2-macroglobulin	BX647329|A2M|2|alpha-2-macroglobulin	CR749334|A2M|2|alpha-2-macroglobulin
hg19_v1_chr12_-_9268522_9268594	1.29639	SOX2.p2	NM_000014|A2M|2|alpha-2-macroglobulin
hg19_v1_chr12_-_9268440_9268472	1.26101	SOX2.p2	AK307832|A2M|2|alpha-2-macroglobulin	AK312482|A2M|2|alpha-2-macroglobulin	AB209614|A2M|2|alpha-2-macroglobulin
hg19_v1_chrX_-_117107700_117107759	1.25971	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr3_+_20081523_20081523	1.2545	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg19_v1_chr5_-_100238870_100238987	1.2522	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v1_chr12_-_48963802_48963828	1.24745	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	HQ258062|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg19_v1_chr14_-_92414004_92414045	1.23988	SOX2.p2	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg19_v1_chr14_-_89883306_89883515	1.23427	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg19_v1_chr4_-_138453628_138453657	1.23327	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg19_v1_chr1_-_182357871_182357935	1.23294	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr8_-_124553448_124553514	1.22441	SOX2.p2	NM_001242463|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg19_v1_chr11_-_119234628_119234857	1.21935	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr9_+_82187469_82187579	1.21892	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v1_chr1_+_66797775_66797932	1.21692	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr14_-_92413738_92413810	1.1911	SOX2.p2	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg19_v1_chr15_-_82336880_82336886	1.18991	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr4_+_78079302_78079685	1.18492	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg19_v1_chr14_+_77228132_77228779	1.18447	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg19_v1_chr2_+_109271267_109271267	1.17327	SOX2.p2	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr6_+_84569427_84569501	1.1722	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr8_-_38325524_38325691	1.16639	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr12_+_14538232_14538312	1.16443	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg19_v1_chr10_+_18948276_18948566	1.15962	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg19_v1_chr8_-_93115453_93115457	1.15155	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr16_+_30389632_30389634	1.14864	SOX2.p2	NM_001214906|ZNF48|197407|zinc finger protein 48	NM_001214907|ZNF48|197407|zinc finger protein 48
hg19_v1_chrX_-_117119282_117119375	1.1377	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr8_-_6420454_6420929	1.13641	SOX2.p2	HQ258258|ANGPT2|285|angiopoietin 2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg19_v1_chr1_+_228337414_228337414	1.10903	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg19_v1_chr14_+_63671101_63671261	1.10882	SOX2.p2	NM_020663|RHOJ|57381|ras homolog gene family, member J	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg19_v1_chr6_+_144612872_144612964	1.10784	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg19_v1_chr11_-_66445218_66445305	1.1075	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr6_+_119215240_119215577	1.10415	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chr10_+_35426709_35426763	1.10405	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr2_+_203499819_203499900	1.09877	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr8_-_93075190_93075190	1.09767	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr9_-_8733893_8733945	1.09756	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr15_-_70994608_70994646	1.09601	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v1_chr1_+_82266081_82266081	1.09394	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr2_-_26205327_26205367	1.08834	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr20_-_45985411_45985566	1.08017	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr1_+_84630374_84630386	1.07859	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr5_+_138677570_138677617	1.07615	SOX2.p2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr5_+_138677546_138677568	1.07097	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr2_-_160472960_160473079	1.06561	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg19_v1_chrX_+_135251795_135251795	1.0646	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr12_-_9268475_9268511	1.05828	SOX2.p2	M11313|A2M|2|alpha-2-macroglobulin	BC040071|A2M|2|alpha-2-macroglobulin	AY591530|A2M|2|alpha-2-macroglobulin
hg19_v1_chr1_+_90098693_90098836	1.05389	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr7_+_116312412_116312532	1.04636	SOX2.p2	EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg19_v1_chr20_+_11898536_11898579	1.04181	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg19_v1_chr4_+_55523906_55524362	1.03476	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v1_chr19_-_14260728_14260872	1.0335	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg19_v1_chr5_+_57878901_57878938	1.03183	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr1_+_212475147_212475147	1.03123	SOX2.p2	AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha
hg19_v1_chrX_-_10645726_10645787	1.01237	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr6_+_116832807_116832835	1.01093	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg19_v1_chr12_+_9142136_9142231	0.986867	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg19_v1_chr5_-_95158365_95158435	0.986663	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr20_+_30598244_30598252	0.985962	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg19_v1_chr19_+_45971249_45971290	0.985723	SOX2.p2	EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v1_chr9_-_126030854_126030923	0.983787	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chr8_-_93107643_93107711	0.979371	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr11_-_66445318_66445397	0.977958	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr18_-_52988916_52989089	0.976877	SOX2.p2	M74718|TCF4|6925|transcription factor 4	FR748220|TCF4|6925|transcription factor 4	FR748221|TCF4|6925|transcription factor 4	AK300038|TCF4|6925|transcription factor 4	NM_001243234|TCF4|6925|transcription factor 4	NM_001243235|TCF4|6925|transcription factor 4
hg19_v1_chr10_-_116444374_116444413	0.976746	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg19_v1_chr9_-_16727887_16727908	0.976456	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg19_v1_chr1_+_66458389_66458417	0.975832	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr9_+_91003238_91003428	0.971942	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg19_v1_chr8_-_38326115_38326188	0.971672	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr5_-_95158465_95158576	0.970103	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chrX_+_135251454_135251454	0.965882	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr13_+_58205788_58205788	0.964944	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr5_-_111092865_111092908	0.963718	SOX2.p2	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_90098643_90098648	0.962349	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr1_-_234743488_234743564	0.960447	SOX2.p2	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2
hg19_v1_chr11_+_129991582_129991674	0.9587	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr14_+_91580713_91580785	0.958164	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr9_+_82187599_82187772	0.953793	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v1_chr6_+_153019029_153019181	0.953635	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg19_v1_chr10_-_88717319_88717424	0.949348	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg19_v1_chr7_+_94297448_94297456	0.948314	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr7_-_86688944_86689013	0.942513	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr2_-_75788079_75788102	0.941951	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr15_+_57210972_57211029	0.92907	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg19_v1_chr4_-_70626429_70626429	0.924791	SOX2.p2	BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1	NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1
hg19_v1_chr2_+_70056773_70056841	0.924213	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr7_-_27213873_27213954	0.922784	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg19_v1_chr17_+_67498391_67498569	0.920003	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr14_+_91580467_91580558	0.917691	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr6_+_122720750_122720882	0.915484	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg19_v1_chrX_-_80457440_80457440	0.913088	SOX2.p2	AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5	NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5
hg19_v1_chr2_+_70056920_70057023	0.911354	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr14_+_91580967_91581087	0.889924	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr15_+_66994669_66994680	0.885551	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg19_v1_chrX_+_135229536_135229731	0.882641	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr14_-_105444693_105444723	0.882101	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr8_-_93111915_93111915	0.881099	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr18_+_7946885_7946928	0.878378	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg19_v1_chr8_-_74659082_74659235	0.877309	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr5_-_39425297_39425338	0.877266	SOX2.p2	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr1_+_221052845_221052984	0.877245	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg19_v1_chrX_+_10124984_10125125	0.877161	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg19_v1_chr7_-_107643330_107643880	0.876994	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr3_+_25469833_25469901	0.875244	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr8_-_93107881_93107881	0.870544	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr1_-_234743820_234743842	0.863821	SOX2.p2	
hg19_v1_chr3_-_141747434_141747506	0.863411	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v1_chr16_+_30406432_30406432	0.856908	SOX2.p2	NM_001214909|ZNF48|197407|zinc finger protein 48
hg19_v1_chr12_-_42877743_42877774	0.852272	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr5_-_114631964_114631986	0.851799	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg19_v1_chr6_+_89790464_89790613	0.851445	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg19_v1_chr7_+_115850546_115850760	0.849564	SOX2.p2	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg19_v1_chr2_-_26205437_26205444	0.847006	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr1_+_185703470_185703682	0.845627	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg19_v1_chr1_+_221053000_221053199	0.845459	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg19_v1_chr9_+_90112754_90112983	0.843227	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr8_-_38325241_38325362	0.838208	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr6_+_122720685_122720706	0.834891	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_001243094|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg19_v1_chrX_+_28605558_28605680	0.832999	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr8_-_124553253_124553447	0.832966	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32
hg19_v1_chr4_-_186877413_186877531	0.832036	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr2_+_169923531_169923719	0.82763	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg19_v1_chr1_-_156051788_156051809	0.826811	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr12_+_27397077_27397171	0.825065	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr15_-_34659245_34659915	0.822357	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr3_+_183353355_183353445	0.813707	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg19_v1_chr9_+_75136716_75136716	0.810702	SOX2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg19_v1_chr1_-_234743855_234743861	0.809805	SOX2.p2	
hg19_v1_chr16_+_30406711_30406771	0.807112	SOX2.p2	NM_152652|ZNF48|197407|zinc finger protein 48
hg19_v1_chr1_+_155099935_155099948	0.805204	SOX2.p2	AK057845|EFNA1|1942|ephrin-A1
hg19_v1_chr18_-_52969714_52969851	0.805033	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr3_-_149375584_149375887	0.800948	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr8_-_17580024_17580083	0.796115	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr7_-_158611301_158611440	0.795161	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg19_v1_chr9_-_140196702_140196738	0.794354	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg19_v1_chr1_+_87794576_87794787	0.793704	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr7_+_26400503_26400554	0.793663	SOX2.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chrX_+_149613719_149613846	0.788827	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chr12_-_6772252_6772360	0.787903	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg19_v1_chr7_-_86595203_86595290	0.785838	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr5_-_32388595_32388645	0.782519	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr10_+_102106771_102106912	0.782168	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chr11_-_61124223_61124360	0.780761	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr1_+_66798095_66798096	0.778059	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr5_+_139028483_139028534	0.777908	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg19_v1_chr9_-_35748875_35749029	0.776487	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg19_v1_chr7_+_150688143_150688191	0.775874	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr1_-_182360181_182360261	0.775567	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr12_-_31743822_31744014	0.76953	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg19_v1_chr13_+_39612440_39612631	0.76764	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3
hg19_v1_chr11_-_130184459_130184606	0.763758	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg19_v1_chr3_+_134514300_134514302	0.757637	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg19_v1_chr15_+_66585822_66585977	0.756764	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr12_-_42877785_42877814	0.755346	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr7_+_89843133_89843133	0.747418	SOX2.p2	AF526382|STEAP2|261729|STEAP family member 2, metalloreductase	AY358267|STEAP2|261729|STEAP family member 2, metalloreductase	NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase
hg19_v1_chr9_+_123850573_123850604	0.741503	SOX2.p2	NM_007018|CNTRL|11064|centriolin	BC137284|CNTRL|11064|centriolin	BC137286|CNTRL|11064|centriolin	AF513978|CNTRL|11064|centriolin
hg19_v1_chr18_+_20715726_20715726	0.7369	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr2_-_110874142_110874142	0.736345	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr2_+_189839132_189839215	0.732392	SOX2.p2	X07240|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr5_+_95066628_95067109	0.726807	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr4_-_89744154_89744408	0.721687	SOX2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg19_v1_chr4_-_76598558_76598562	0.72158	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr3_-_69037498_69037515	0.720255	SOX2.p2	AK123213|C3orf64|285203|chromosome 3 open reading frame 64
hg19_v1_chr17_-_21156577_21156755	0.718789	SOX2.p2	AK126856|C17orf103|256302|chromosome 17 open reading frame 103	NM_152914|C17orf103|256302|chromosome 17 open reading frame 103	BC029527|C17orf103|256302|chromosome 17 open reading frame 103
hg19_v1_chr11_+_113931228_113931287	0.711783	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg19_v1_chr3_+_182971592_182971620	0.711569	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chrX_+_70503041_70503041	0.709944	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr4_+_78078394_78078526	0.706862	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg19_v1_chr13_-_74708361_74708431	0.703797	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr6_+_15246299_15246526	0.694402	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr19_+_1026608_1026612	0.689822	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg19_v1_chr11_-_71791434_71791599	0.688148	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr17_-_39728304_39728309	0.685317	SOX2.p2	BC121170|KRT9|3857|keratin 9	NM_000226|KRT9|3857|keratin 9	S69510|KRT9|3857|keratin 9	Z29074|KRT9|3857|keratin 9
hg19_v1_chr6_+_89790412_89790462	0.685117	SOX2.p2	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg19_v1_chr10_-_14646237_14646398	0.68496	SOX2.p2	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr12_-_56615484_56615661	0.681377	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr6_-_134373618_134373788	0.680909	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v1_chr1_+_43766565_43766742	0.680758	SOX2.p2	NM_001253357|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg19_v1_chr10_-_11574273_11574273	0.679523	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr9_-_126030792_126030848	0.679521	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chr5_-_150284429_150284464	0.678228	SOX2.p2	AK300528|ZNF300|91975|zinc finger protein 300
hg19_v1_chr4_+_140587086_140587182	0.677729	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg19_v1_chr13_+_111855406_111855439	0.674695	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr12_-_56615679_56615772	0.672639	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr9_-_72287097_72287311	0.669753	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v1_chr1_+_163038934_163039274	0.667526	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr5_+_138678130_138678198	0.667026	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr1_+_163038564_163038763	0.664331	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr3_+_49568370_49568448	0.662804	SOX2.p2	AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)
hg19_v1_chr2_+_189157551_189157612	0.662133	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr10_+_35484054_35484117	0.661221	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg19_v1_chr7_+_93551015_93551098	0.660752	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg19_v1_chr12_-_71003622_71003623	0.658347	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg19_v1_chr2_-_218843541_218843551	0.656894	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg19_v1_chr2_-_99347430_99347562	0.653345	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr2_+_109204777_109204794	0.653088	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr7_+_63773185_63773185	0.651893	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg19_v1_chr15_-_64995346_64995374	0.651465	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr6_+_90276556_90276694	0.650744	SOX2.p2	NM_001242814|ANKRD6|22881|ankyrin repeat domain 6	AK096867|ANKRD6|22881|ankyrin repeat domain 6
hg19_v1_chr18_+_13611664_13611664	0.649363	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg19_v1_chr17_+_65821625_65821780	0.649081	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr18_-_53089722_53089722	0.648911	SOX2.p2	AK300612|TCF4|6925|transcription factor 4	NM_001243233|TCF4|6925|transcription factor 4
hg19_v1_chr4_+_54243731_54243808	0.647889	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr2_-_208031570_208031680	0.647176	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg19_v1_chr1_+_33004771_33004771	0.642024	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr1_-_32801606_32801856	0.641945	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chr9_-_36375965_36376036	0.636429	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg19_v1_chr12_+_79439432_79439471	0.636316	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg19_v1_chr4_+_134073180_134073387	0.635236	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg19_v1_chr5_-_168271852_168271866	0.632515	SOX2.p2	
hg19_v1_chr6_+_34857021_34857179	0.630498	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr2_+_181845803_181845852	0.630085	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr2_+_177016112_177016314	0.629743	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr7_-_37025696_37025745	0.629291	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr11_-_47207425_47207431	0.626729	SOX2.p2	AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3
hg19_v1_chr18_-_53257033_53257044	0.625732	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr4_+_54243822_54243828	0.623329	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr14_+_100259445_100259963	0.620404	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg19_v1_chr9_-_107690526_107690532	0.620221	SOX2.p2	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr1_-_94586678_94586704	0.615071	SOX2.p2	AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v1_chr12_+_60083125_60083154	0.612846	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg19_v1_chr21_-_39870303_39870427	0.610959	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg19_v1_chr20_+_306205_306268	0.610184	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg19_v1_chr22_+_19711065_19711070	0.60846	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg19_v1_chr4_+_54243829_54243899	0.608001	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr15_+_96869156_96869166	0.606282	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr10_+_22605300_22605351	0.603493	SOX2.p2	NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	AY542159|COMMD3|23412|COMM domain containing 3
hg19_v1_chr5_+_86563594_86563777	0.60022	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr3_-_168864066_168864092	0.599248	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr9_+_27109138_27109146	0.597172	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg19_v1_chr2_+_208394692_208394750	0.595931	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr10_-_65028825_65029005	0.595248	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg19_v1_chr11_+_128563955_128563968	0.594943	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr7_-_148581297_148581358	0.593438	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr12_-_7848324_7848388	0.592731	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg19_v1_chr15_-_64995388_64995416	0.592399	SOX2.p2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr6_+_84569394_84569410	0.591914	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr12_-_6233684_6233835	0.591033	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg19_v1_chr9_-_35650852_35650946	0.5879	SOX2.p2	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg19_v1_chr14_+_85996512_85996571	0.587248	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr17_-_67057046_67057135	0.585459	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr3_+_123813527_123813684	0.583237	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chrX_-_135962929_135962942	0.583199	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr2_-_110873638_110873650	0.583157	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr9_-_74525846_74526005	0.582992	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg19_v1_chr7_+_80267782_80267831	0.580013	SOX2.p2	NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)	NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr15_+_25200069_25200191	0.579436	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg19_v1_chrX_+_54947228_54947287	0.579177	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chr1_-_52520768_52520888	0.578631	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr10_-_14646407_14646451	0.577236	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr1_+_221052735_221052788	0.576751	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg19_v1_chr5_-_111093792_111093914	0.573733	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr12_+_56324945_56325082	0.573146	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg19_v1_chr1_+_16085245_16085309	0.571818	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr3_-_125820390_125820399	0.571423	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr5_-_111093251_111093465	0.568866	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr13_-_48987247_48987263	0.567984	SOX2.p2	BX537445|LPAR6|10161|lysophosphatidic acid receptor 6	AK123059|LPAR6|10161|lysophosphatidic acid receptor 6	BX537392|LPAR6|10161|lysophosphatidic acid receptor 6	BX537438|LPAR6|10161|lysophosphatidic acid receptor 6	BX647109|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr1_-_622033_622052	0.567414	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg19_v1_chrX_+_70503496_70503508	0.56734	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr3_+_44626453_44626459	0.566849	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg19_v1_chr1_-_52521046_52521046	0.565344	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr2_+_120517206_120517594	0.564488	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v1_chr20_-_45976626_45976669	0.563831	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr10_+_97803064_97803699	0.563745	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr5_+_139027868_139027881	0.562968	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg19_v1_chr6_-_75965845_75965927	0.562113	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr13_-_74707913_74708065	0.560244	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr19_+_48972464_48972572	0.559341	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2
hg19_v1_chr13_+_32605436_32605446	0.555624	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg19_v1_chr19_-_42806928_42806954	0.553022	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr14_+_37667148_37667292	0.552482	SOX2.p2	BC035870|MIPOL1|145282|mirror-image polydactyly 1	BX537396|MIPOL1|145282|mirror-image polydactyly 1	AK291850|MIPOL1|145282|mirror-image polydactyly 1	BC036523|MIPOL1|145282|mirror-image polydactyly 1	BC036124|MIPOL1|145282|mirror-image polydactyly 1	BX647795|MIPOL1|145282|mirror-image polydactyly 1	AY059470|MIPOL1|145282|mirror-image polydactyly 1
hg19_v1_chr15_+_57210852_57210885	0.55248	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg19_v1_chr6_-_32191779_32191843	0.550908	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg19_v1_chr11_-_10830034_10830078	0.550006	SOX2.p2	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr1_+_33722158_33722173	0.549258	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg19_v1_chr1_+_16090993_16091029	0.545651	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr9_+_115631814_115631917	0.542556	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg19_v1_chr12_-_9913415_9913496	0.54238	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg19_v1_chr5_+_65222494_65222554	0.541872	SOX2.p2	AF276423|ERBB2IP|55914|erbb2 interacting protein	BC050692|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr9_-_123476578_123476857	0.541747	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg19_v1_chr2_-_192711651_192711826	0.54117	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chrX_+_70521627_70521654	0.540709	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg19_v1_chr5_+_139027955_139028013	0.540213	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg19_v1_chr19_+_1026271_1026327	0.539929	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg19_v1_chr5_+_68800003_68800071	0.538508	SOX2.p2	NM_001205255|OCLN|100506658|occludin	FJ786083|OCLN|100506658|occludin	FJ786084|OCLN|100506658|occludin	GQ225096|OCLN|100506658|occludin	GQ225097|OCLN|100506658|occludin	GQ225098|OCLN|100506658|occludin	GQ402517|OCLN|100506658|occludin	DQ892423|OCLN|100506658|occludin	DQ895637|OCLN|100506658|occludin	AB451306|OCLN|100506658|occludin	AB451437|OCLN|100506658|occludin
hg19_v1_chr14_+_105941061_105941199	0.536783	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg19_v1_chr15_-_64995459_64995479	0.535143	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr11_+_128564130_128564154	0.535134	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr5_+_139027907_139027953	0.534556	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5
hg19_v1_chr10_-_79628870_79628948	0.534173	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg19_v1_chr15_+_66585632_66585659	0.533295	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr19_+_34710327_34710434	0.532588	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v1_chr12_-_25801487_25801487	0.532539	SOX2.p2	AK296816|IFLTD1|160492|intermediate filament tail domain containing 1	NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1
hg19_v1_chr1_+_81771844_81772011	0.53243	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chrX_+_70503469_70503494	0.528546	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr2_+_14772839_14772864	0.527145	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr4_+_140586921_140587059	0.527037	SOX2.p2	NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2	NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2	NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg19_v1_chr1_+_164528914_164529059	0.526554	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg19_v1_chr17_+_4046417_4046549	0.525398	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr19_-_42806460_42806861	0.524743	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr20_+_2944918_2944935	0.522513	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr3_-_128294928_128294928	0.520024	SOX2.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg19_v1_chr18_-_48723689_48723736	0.519241	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr5_+_140602914_140603078	0.518958	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg19_v1_chr6_+_111135823_111135843	0.513814	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg19_v1_chr7_+_20370324_20370350	0.510657	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg19_v1_chr4_-_138453564_138453620	0.510422	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg19_v1_chr4_+_78078332_78078391	0.507502	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg19_v1_chr15_-_101792125_101792145	0.506971	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chrX_+_70503512_70503532	0.50695	SOX2.p2	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr1_+_87794548_87794570	0.505819	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg19_v1_chr9_+_4490193_4490681	0.504611	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr19_+_10713055_10713212	0.50459	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg19_v1_chr8_-_22550708_22550861	0.504531	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg19_v1_chr15_-_59665069_59665072	0.502853	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr4_+_54243810_54243821	0.50285	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr5_-_38595506_38595506	0.502626	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg19_v1_chr3_-_149095458_149095486	0.501467	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr21_+_27107731_27107801	0.500542	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr6_+_84569364_84569393	0.500286	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr13_-_48987017_48987244	0.491177	SOX2.p2	AK223389|LPAR6|10161|lysophosphatidic acid receptor 6	BC070295|LPAR6|10161|lysophosphatidic acid receptor 6	BC054346|LPAR6|10161|lysophosphatidic acid receptor 6	BC040850|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr2_+_109384601_109384766	0.490868	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg19_v1_chr1_-_225840660_225840915	0.4905	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg19_v1_chr2_+_217498082_217498190	0.48627	SOX2.p2	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg19_v1_chr8_-_38205652_38205732	0.483125	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v1_chr9_-_74383301_74383855	0.48208	SOX2.p2	BC140773|TMEM2|23670|transmembrane protein 2	BC144510|TMEM2|23670|transmembrane protein 2	BC171782|TMEM2|23670|transmembrane protein 2	AB037833|TMEM2|23670|transmembrane protein 2	BC146780|TMEM2|23670|transmembrane protein 2	AF137030|TMEM2|23670|transmembrane protein 2	AK300405|TMEM2|23670|transmembrane protein 2	NM_001135820|TMEM2|23670|transmembrane protein 2	NM_013390|TMEM2|23670|transmembrane protein 2
hg19_v1_chr4_-_152149042_152149181	0.479888	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19	NM_001243349|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr6_-_112575880_112575911	0.477705	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chr3_-_112359547_112359558	0.476727	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr4_-_54424345_54424355	0.475806	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr4_-_141075232_141075433	0.475655	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg19_v1_chr4_-_54424402_54424435	0.475372	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr2_-_158731622_158731622	0.474068	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg19_v1_chr21_-_27512668_27512777	0.474006	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr17_+_31254927_31254927	0.473707	SOX2.p2	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98
hg19_v1_chr21_-_47705235_47705275	0.473372	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg19_v1_chr14_+_75229995_75230069	0.471829	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg19_v1_chr1_+_162351519_162351652	0.469445	SOX2.p2	AK125122|C1orf226|400793|chromosome 1 open reading frame 226	NM_001085375|C1orf226|400793|chromosome 1 open reading frame 226	BC127743|C1orf226|400793|chromosome 1 open reading frame 226	BC127744|C1orf226|400793|chromosome 1 open reading frame 226
hg19_v1_chr17_-_39661803_39661865	0.46937	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	HQ258420|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg19_v1_chr10_+_35415768_35415957	0.468409	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg19_v1_chr18_-_53255361_53255479	0.464259	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg19_v1_chr3_+_111578026_111578116	0.462813	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg19_v1_chr22_+_27017927_27017935	0.462157	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg19_v1_chr2_+_208394756_208394806	0.461884	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr3_+_132318980_132318980	0.461195	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg19_v1_chr13_-_48987652_48987652	0.459513	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr9_-_95298251_95298373	0.459107	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr7_-_148581359_148581376	0.458044	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr1_-_150241210_150241399	0.457281	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr14_-_105531739_105531758	0.456644	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr11_-_76155704_76155747	0.455067	SOX2.p2	
hg19_v1_chr5_+_121647773_121647943	0.454021	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr21_+_27107522_27107531	0.453415	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr21_+_35190586_35190755	0.453164	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr4_+_144435076_144435153	0.452636	SOX2.p2	
hg19_v1_chrX_-_139866582_139866722	0.451708	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg19_v1_chr5_-_39394423_39394520	0.451336	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr22_+_23522551_23522690	0.451018	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg19_v1_chr1_+_33004969_33005120	0.450156	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr5_+_139028025_139028309	0.449883	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg19_v1_chr15_+_57511616_57511718	0.449367	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg19_v1_chr2_+_208394823_208394828	0.4489	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr17_-_46651809_46651848	0.448744	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg19_v1_chr1_+_155036201_155036299	0.448197	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr3_-_151987332_151987359	0.447893	SOX2.p2	AK304857|LOC401093|401093|uncharacterized LOC401093	AK316515|LOC401093|401093|uncharacterized LOC401093
hg19_v1_chr6_-_79944324_79944392	0.447328	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr3_+_136649316_136649358	0.446524	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr17_+_4046941_4047078	0.445319	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr1_-_21377387_21377394	0.445313	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr2_+_181845605_181845681	0.444596	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chrY_-_15591799_15591868	0.444397	SOX2.p2	AK292858|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC071744|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC029389|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC012581|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked
hg19_v1_chr17_+_48348766_48348766	0.444338	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg19_v1_chr20_-_25013307_25013341	0.443028	SOX2.p2	AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1	AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1	NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1
hg19_v1_chr2_-_198540583_198540767	0.441456	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg19_v1_chr12_+_101988746_101988846	0.438627	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr11_+_9596233_9596233	0.436527	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg19_v1_chr8_-_29940487_29940658	0.436372	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg19_v1_chr4_+_113152838_113153331	0.43585	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg19_v1_chr9_-_36400817_36400977	0.435284	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr17_-_39675078_39675269	0.434847	SOX2.p2	BT007261|KRT15|3866|keratin 15	DQ892990|KRT15|3866|keratin 15	DQ896238|KRT15|3866|keratin 15	BC110649|KRT15|3866|keratin 15	BC002641|KRT15|3866|keratin 15	X07696|KRT15|3866|keratin 15	AK304059|KRT15|3866|keratin 15	NM_002275|KRT15|3866|keratin 15
hg19_v1_chr5_+_137514416_137514416	0.432901	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr18_+_3594056_3594228	0.432883	SOX2.p2	AK093095|FLJ35776|649446|uncharacterized LOC649446	BC137437|FLJ35776|649446|uncharacterized LOC649446
hg19_v1_chr1_+_150039341_150039438	0.432453	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr7_-_21985421_21985543	0.429857	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg19_v1_chr3_+_143692166_143692268	0.429637	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg19_v1_chr5_+_126112819_126112844	0.429278	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg19_v1_chr1_-_150978879_150979384	0.428581	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg19_v1_chr2_+_191273012_191273115	0.428546	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr19_+_39903749_39903749	0.428418	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg19_v1_chr3_+_19988861_19988941	0.427619	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr10_+_94594469_94594469	0.426817	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg19_v1_chr6_+_52935770_52935770	0.426528	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg19_v1_chr5_+_140739589_140739702	0.426526	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr6_-_79944397_79944454	0.426387	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr14_-_73493744_73493919	0.425439	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg19_v1_chr1_-_68697997_68698317	0.425131	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr3_-_114343052_114343052	0.424811	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr20_+_10415949_10416004	0.424508	SOX2.p2	BC020787|C20orf94|128710|chromosome 20 open reading frame 94	BC026094|C20orf94|128710|chromosome 20 open reading frame 94	NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94
hg19_v1_chr10_-_103874661_103874795	0.42439	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg19_v1_chr4_-_85887543_85887543	0.423956	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg19_v1_chr11_+_58390145_58390225	0.421912	SOX2.p2	BC069167|CNTF|1270|ciliary neurotrophic factor	NM_000614|CNTF|1270|ciliary neurotrophic factor	BC068030|CNTF|1270|ciliary neurotrophic factor	AK314118|CNTF|1270|ciliary neurotrophic factor	BC074963|CNTF|1270|ciliary neurotrophic factor	BC074964|CNTF|1270|ciliary neurotrophic factor	S72921|CNTF|1270|ciliary neurotrophic factor
hg19_v1_chr6_-_75915566_75915745	0.421596	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr1_-_17308072_17308080	0.420948	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr17_+_28705960_28705972	0.420772	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg19_v1_chr20_-_43150673_43150683	0.420538	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg19_v1_chr11_+_128563993_128564117	0.420232	SOX2.p2	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr2_-_164592512_164592522	0.419828	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg19_v1_chr13_-_41593405_41593482	0.419348	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr2_+_179059071_179059377	0.418161	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg19_v1_chr1_+_86046434_86046668	0.416745	SOX2.p2	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg19_v1_chr9_-_74979625_74979825	0.41653	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr4_+_170581212_170581298	0.416415	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3	NM_001243374|CLCN3|1182|chloride channel 3
hg19_v1_chr2_+_62934030_62934031	0.416249	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg19_v1_chr4_+_144434555_144434902	0.414546	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v1_chr1_-_249120063_249120153	0.414479	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg19_v1_chr1_+_244214576_244214591	0.414183	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chr14_+_64971504_64971542	0.414118	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr5_+_137514753_137514878	0.413634	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr9_-_124989755_124989864	0.412379	SOX2.p2	AM392697|LHX6|26468|LIM homeobox 6	AM393362|LHX6|26468|LIM homeobox 6	EU446700|LHX6|26468|LIM homeobox 6	AB031041|LHX6|26468|LIM homeobox 6	AB031042|LHX6|26468|LIM homeobox 6	AK313808|LHX6|26468|LIM homeobox 6	AK289827|LHX6|26468|LIM homeobox 6	NM_001242334|LHX6|26468|LIM homeobox 6
hg19_v1_chr5_-_111093030_111093133	0.411678	SOX2.p2	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr6_-_132834165_132834336	0.411546	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr14_-_105531764_105531783	0.411288	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132	AX775935|GPR132|29933|G protein-coupled receptor 132	AX775841|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr5_+_10353980_10354037	0.410889	SOX2.p2	
hg19_v1_chr2_+_115219153_115219179	0.410102	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg19_v1_chr1_-_86043932_86044049	0.408679	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr11_-_89224413_89224732	0.40854	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg19_v1_chr12_+_56360547_56360632	0.408531	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr4_+_90816002_90816122	0.407563	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1	HQ258009|MMRN1|22915|multimerin 1
hg19_v1_chr22_+_39052671_39052721	0.407518	SOX2.p2	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)	AL050345|CBY1|25776|chibby homolog 1 (Drosophila)	BC016139|CBY1|25776|chibby homolog 1 (Drosophila)	AF331041|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr12_-_96184346_96184393	0.406758	SOX2.p2	AF297711|NTN4|59277|netrin 4	AK226070|NTN4|59277|netrin 4	AK315796|NTN4|59277|netrin 4
hg19_v1_chr5_+_61874561_61874716	0.40667	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg19_v1_chr7_-_27183225_27183286	0.406591	SOX2.p2	BT009744|HOXA5|3202|homeobox A5	CR542256|HOXA5|3202|homeobox A5	CR542277|HOXA5|3202|homeobox A5	DQ890593|HOXA5|3202|homeobox A5	DQ893761|HOXA5|3202|homeobox A5	BC013682|HOXA5|3202|homeobox A5	NM_019102|HOXA5|3202|homeobox A5
hg19_v1_chr11_+_101983170_101983244	0.404614	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr8_-_17942410_17942507	0.404509	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr2_+_10262694_10262824	0.403897	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr2_+_109204745_109204767	0.403655	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr3_-_149095413_149095452	0.402049	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr10_+_69644708_69644876	0.401739	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg19_v1_chr9_-_32550818_32550908	0.400581	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr2_-_39664291_39664311	0.400291	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr1_-_21503304_21503344	0.400113	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr1_-_26233367_26233367	0.399833	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chr22_+_39052628_39052669	0.399814	SOX2.p2	AK307265|CBY1|25776|chibby homolog 1 (Drosophila)	AK311928|CBY1|25776|chibby homolog 1 (Drosophila)	NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)	NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr20_-_18810838_18810838	0.399766	SOX2.p2	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496
hg19_v1_chr9_-_140142165_140142221	0.398803	SOX2.p2	HQ258370|FAM166A|401565|family with sequence similarity 166, member A	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg19_v1_chr9_-_80646150_80646218	0.398675	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v1_chr8_-_102803196_102803204	0.397817	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr3_-_112359660_112359673	0.397628	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr10_-_115934363_115934363	0.397293	SOX2.p2	NM_018017|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr2_+_210444364_210444424	0.396654	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr9_+_127119114_127119225	0.395888	SOX2.p2	
hg19_v1_chr4_+_30721865_30722133	0.395731	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr5_-_78282356_78282356	0.394082	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg19_v1_chr5_+_95067511_95067562	0.39313	SOX2.p2	
hg19_v1_chr3_-_114790221_114790260	0.392923	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr2_+_16080639_16080737	0.391633	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr22_+_23522699_23522728	0.391502	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg19_v1_chr2_-_99347588_99347638	0.391167	SOX2.p2	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr17_+_61851557_61851584	0.390466	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg19_v1_chr5_+_126112847_126112918	0.390144	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg19_v1_chr8_-_81787015_81787015	0.389868	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr12_+_48516428_48516562	0.389781	SOX2.p2	D21861|PFKM|5213|phosphofructokinase, muscle	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg19_v1_chr16_+_58534045_58534152	0.389618	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr3_-_69129502_69129544	0.389549	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr4_+_76649806_76649825	0.389482	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chrX_+_73641084_73641409	0.389027	SOX2.p2	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
hg19_v1_chr8_+_11660297_11660341	0.387129	SOX2.p2	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr6_-_27440459_27440944	0.386441	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg19_v1_chrX_-_18690187_18690222	0.384924	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr15_+_65822842_65823005	0.383559	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr17_+_67410825_67410927	0.382993	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr11_+_129979330_129979349	0.382674	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr6_-_35696359_35696359	0.381812	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg19_v1_chr5_+_43602738_43602941	0.381733	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg19_v1_chr2_-_39664129_39664290	0.381685	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr17_+_31255170_31255236	0.381287	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg19_v1_chrX_-_24690740_24690978	0.381179	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr12_-_57400199_57400304	0.380683	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg19_v1_chr2_+_109204904_109205034	0.38008	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr5_-_14871555_14872155	0.380079	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg19_v1_chr3_-_15839674_15839690	0.37988	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chr17_+_61851512_61851532	0.379876	SOX2.p2	
hg19_v1_chrX_+_21958714_21958938	0.378973	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chr1_-_21503352_21503388	0.37846	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr15_+_65822738_65822840	0.377876	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr1_-_47695442_47695442	0.377462	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chr7_-_148725500_148725610	0.376896	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr6_-_139094788_139094815	0.376844	SOX2.p2	AK092592|LOC100507462|100507462|uncharacterized LOC100507462	NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462
hg19_v1_chr9_-_4741049_4741068	0.376279	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg19_v1_chr14_+_64971226_64971291	0.376258	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr3_-_112359251_112359260	0.37586	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr4_-_174450529_174450571	0.375489	SOX2.p2	BC101406|HAND2|9464|heart and neural crest derivatives expressed 2	BC101974|HAND2|9464|heart and neural crest derivatives expressed 2	BC109383|HAND2|9464|heart and neural crest derivatives expressed 2
hg19_v1_chr5_+_140624916_140624980	0.375457	SOX2.p2	AK312794|PCDHB15|56121|protocadherin beta 15	BC038797|PCDHB15|56121|protocadherin beta 15
hg19_v1_chr15_-_40633122_40633167	0.374872	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg19_v1_chr18_-_53303129_53303187	0.374335	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_65222381_65222437	0.373643	SOX2.p2	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_001253697|ERBB2IP|55914|erbb2 interacting protein	NM_001253698|ERBB2IP|55914|erbb2 interacting protein	NM_001253699|ERBB2IP|55914|erbb2 interacting protein	NM_001253701|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AF263744|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chrX_-_134185978_134186280	0.373005	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg19_v1_chr11_+_128563973_128563988	0.372659	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr19_+_1249882_1249886	0.372189	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg19_v1_chr8_-_29940464_29940485	0.370635	SOX2.p2	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg19_v1_chr10_+_54074037_54074194	0.370581	SOX2.p2	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)
hg19_v1_chr8_+_21777165_21777214	0.369671	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr20_-_45927496_45927643	0.36948	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr1_+_97187174_97187394	0.369093	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg19_v1_chr8_-_74659056_74659079	0.368942	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|uncharacterized LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr7_+_94024201_94024342	0.368363	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr3_-_17741511_17741511	0.368113	SOX2.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg19_v1_chr3_-_112359443_112359478	0.366469	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chrX_-_77041486_77041576	0.366401	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr7_-_148581379_148581383	0.36621	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr16_+_2083264_2083296	0.366113	SOX2.p2	NM_001252073|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252075|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252076|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg19_v1_chr5_-_32403310_32403396	0.364529	SOX2.p2	BC062986|ZFR|51663|zinc finger RNA binding protein	BC051893|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr11_+_76092336_76092511	0.364081	SOX2.p2	AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like
hg19_v1_chr11_-_27681195_27681195	0.362789	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr20_-_43150592_43150672	0.362524	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg19_v1_chr6_-_136610894_136610927	0.362417	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chrX_-_77041678_77041774	0.360518	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr5_-_138210992_138211035	0.360496	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr1_-_244006885_244006885	0.358526	SOX2.p2	AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)	NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
hg19_v1_chr1_-_53018630_53018704	0.358249	SOX2.p2	BC131734|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC048301|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg19_v1_chr22_+_23522743_23522858	0.357802	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg19_v1_chr2_-_192711923_192712020	0.357384	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr18_+_56530677_56531034	0.356047	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr7_+_26242007_26242107	0.355472	SOX2.p2	
hg19_v1_chr15_-_50411405_50411527	0.355183	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg19_v1_chr7_+_128828712_128828712	0.354844	SOX2.p2	BC009989|SMO|6608|smoothened, frizzled family receptor	NM_005631|SMO|6608|smoothened, frizzled family receptor
hg19_v1_chr15_+_80364902_80364950	0.354585	SOX2.p2	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6	AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6	AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr14_-_31676680_31676690	0.354518	SOX2.p2	NM_015382|HECTD1|25831|HECT domain containing 1
hg19_v1_chr8_-_29206321_29206321	0.354446	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg19_v1_chr3_-_112359565_112359589	0.353912	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr8_+_124194751_124194829	0.353027	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr7_-_14031049_14031049	0.352597	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg19_v1_chr15_+_85144219_85144343	0.351868	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg19_v1_chr1_+_182808481_182808540	0.351021	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr14_+_85996454_85996493	0.350918	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr3_+_113616317_113616402	0.349267	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chr11_-_63536112_63536281	0.349045	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg19_v1_chr17_-_56296965_56296965	0.347011	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg19_v1_chr4_-_104020964_104021036	0.346941	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg19_v1_chr11_+_10879763_10879809	0.346523	SOX2.p2	BC014360|LOC729013|729013|uncharacterized LOC729013	BC036635|LOC729013|729013|uncharacterized LOC729013
hg19_v1_chr3_-_47957475_47957611	0.345088	SOX2.p2	
hg19_v1_chr4_+_76649739_76649790	0.34487	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chrX_-_63425484_63425669	0.344833	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg19_v1_chr4_+_54243909_54244009	0.344642	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr18_-_21852189_21852195	0.344417	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr2_+_66662516_66662531	0.343802	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg19_v1_chrX_-_24665225_24665425	0.34365	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr20_-_17511973_17512012	0.34225	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr2_+_10262853_10262925	0.341676	SOX2.p2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr6_+_160183510_160183544	0.341348	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg19_v1_chr2_-_110873353_110873457	0.341071	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr2_+_198669316_198669425	0.33986	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg19_v1_chr13_+_36050885_36050965	0.339012	SOX2.p2	AK294737|NBEA|26960|neurobeachin	NM_001204197|NBEA|26960|neurobeachin	AK315939|NBEA|26960|neurobeachin
hg19_v1_chr2_-_208489972_208490006	0.338979	SOX2.p2	NM_001127395|METTL21A|151194|methyltransferase like 21A
hg19_v1_chr17_+_28705981_28705998	0.338106	SOX2.p2	U65090|CPD|1362|carboxypeptidase D
hg19_v1_chr5_-_111754738_111755009	0.337841	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg19_v1_chrX_-_10535476_10535642	0.337815	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr2_+_66662692_66662988	0.337127	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg19_v1_chr4_-_76598563_76598596	0.336905	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chrX_-_64196268_64196430	0.336521	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg19_v1_chr10_-_14816895_14816895	0.336375	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr8_+_11660272_11660291	0.335995	SOX2.p2	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr9_-_97356007_97356074	0.335226	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg19_v1_chr1_-_75199091_75199091	0.33483	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg19_v1_chr1_+_36387788_36387930	0.334508	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr12_+_120933911_120933915	0.333501	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr11_-_114271052_114271297	0.333274	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71
hg19_v1_chr11_+_125034604_125034649	0.333155	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg19_v1_chr19_+_1248548_1248600	0.33303	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg19_v1_chr12_-_70083055_70083056	0.332871	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg19_v1_chr19_-_43098980_43099081	0.332799	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg19_v1_chr21_+_30671736_30671736	0.33279	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v1_chr6_+_148664124_148664259	0.332644	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr12_-_8815479_8815486	0.331983	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr7_-_128415843_128415843	0.331981	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg19_v1_chrX_+_135579670_135579843	0.33188	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chrX_-_19817854_19817897	0.33151	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg19_v1_chr3_+_193853930_193853936	0.331195	SOX2.p2	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg19_v1_chr15_-_56388662_56388733	0.331147	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg19_v1_chr5_-_76382905_76383181	0.331068	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg19_v1_chr8_-_28347733_28347826	0.330897	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16
hg19_v1_chr1_+_207002221_207002221	0.330673	SOX2.p2	AF453946|IL19|29949|interleukin 19	NM_013371|IL19|29949|interleukin 19
hg19_v1_chr12_-_50595303_50595315	0.329252	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr14_-_20774089_20774125	0.329108	SOX2.p2	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr5_+_140213968_140213968	0.328108	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg19_v1_chr1_+_100818031_100818050	0.326716	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr2_+_206547131_206547226	0.32655	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg19_v1_chr17_-_39538635_39538654	0.326274	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg19_v1_chr5_+_36606667_36606790	0.325203	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr2_+_191301020_191301120	0.324542	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr8_+_42195972_42196142	0.323404	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr2_+_61292999_61293036	0.323312	SOX2.p2	AK131267|KIAA1841|84542|KIAA1841	NM_001129993|KIAA1841|84542|KIAA1841	BC039298|KIAA1841|84542|KIAA1841	AK309749|KIAA1841|84542|KIAA1841
hg19_v1_chr5_+_42548144_42548144	0.32306	SOX2.p2	NM_001242402|GHR|2690|growth hormone receptor
hg19_v1_chr4_+_86699858_86699939	0.322988	SOX2.p2	BC098580|ARHGAP24|83478|Rho GTPase activating protein 24	AK098193|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr2_+_48757292_48757358	0.32296	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg19_v1_chr21_+_27107671_27107726	0.322942	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr14_-_20774129_20774154	0.322763	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr1_+_196621007_196621247	0.322708	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg19_v1_chr12_-_46766563_46766644	0.322608	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr9_-_34620499_34620533	0.322386	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr22_-_46933066_46933162	0.322305	SOX2.p2	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
hg19_v1_chr16_+_58497628_58497648	0.321843	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr11_+_7618416_7618421	0.32128	SOX2.p2	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v1_chr3_+_43328001_43328137	0.320897	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg19_v1_chr3_-_49459870_49460011	0.320842	SOX2.p2	BC007546|AMT|275|aminomethyltransferase	AK293481|AMT|275|aminomethyltransferase	AK293594|AMT|275|aminomethyltransferase	AK294592|AMT|275|aminomethyltransferase	AK290600|AMT|275|aminomethyltransferase	AK301072|AMT|275|aminomethyltransferase	AK091738|AMT|275|aminomethyltransferase	BC094771|AMT|275|aminomethyltransferase	AK296177|AMT|275|aminomethyltransferase	AK096062|AMT|275|aminomethyltransferase	D13811|AMT|275|aminomethyltransferase
hg19_v1_chr1_+_367639_367658	0.320268	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chr3_+_82035288_82035316	0.319532	SOX2.p2	
hg19_v1_chr1_-_221910801_221910801	0.318966	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg19_v1_chr2_+_132480063_132480063	0.3182	SOX2.p2	AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A	NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A
hg19_v1_chr1_-_150241409_150241608	0.318134	SOX2.p2	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr15_-_49338496_49338777	0.317242	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg19_v1_chr11_+_6897855_6897878	0.317136	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg19_v1_chr12_+_112204690_112204694	0.317092	SOX2.p2	NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr12_+_112204711_112204786	0.316885	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr17_+_27573874_27573881	0.316696	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1	HQ258110|CRYBA1|1411|crystallin, beta A1
hg19_v1_chr1_-_153067000_153067000	0.31668	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg19_v1_chr2_-_44586854_44586887	0.315926	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr1_-_225616556_225616556	0.315306	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr7_-_148581403_148581449	0.313671	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr5_+_140254930_140255057	0.313017	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12	HQ258507|PCDHA12|56137|protocadherin alpha 12
hg19_v1_chr10_+_63661012_63661012	0.312258	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg19_v1_chr4_-_152096655_152096703	0.311818	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr10_-_64578926_64578926	0.310926	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg19_v1_chrX_+_84498993_84499002	0.31073	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg19_v1_chr18_-_53255734_53255861	0.309811	SOX2.p2	FR748216|TCF4|6925|transcription factor 4	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_001243230|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg19_v1_chr5_-_149466173_149466293	0.309302	SOX2.p2	BC047521|CSF1R|1436|colony stimulating factor 1 receptor	AK304491|CSF1R|1436|colony stimulating factor 1 receptor	M25786|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr21_-_44846927_44847064	0.308961	SOX2.p2	AB047786|SIK1|150094|salt-inducible kinase 1	NM_173354|SIK1|150094|salt-inducible kinase 1	BC038504|SIK1|150094|salt-inducible kinase 1
hg19_v1_chr9_-_74979829_74980371	0.308539	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr22_+_21271723_21271939	0.308105	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr5_+_78531848_78531934	0.307989	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg19_v1_chr7_-_148581377_148581378	0.307959	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr2_-_99279935_99279935	0.307773	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr3_+_52828783_52828815	0.306838	SOX2.p2	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3
hg19_v1_chr3_+_148583042_148583094	0.306512	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg19_v1_chrX_-_128788913_128788932	0.305235	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg19_v1_chr12_-_8043743_8043794	0.304944	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v1_chr18_+_3449972_3450188	0.304476	SOX2.p2	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr8_-_117023_117023	0.304427	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg19_v1_chr10_+_69644938_69644960	0.304202	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg19_v1_chr6_-_79675672_79675833	0.304044	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr16_+_8814567_8814593	0.303313	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr20_+_35202956_35202956	0.302916	SOX2.p2	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2	NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough
hg19_v1_chr19_-_58067724_58067724	0.302678	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg19_v1_chrX_+_107683015_107683153	0.300362	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr6_+_155538096_155538160	0.300232	SOX2.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg19_v1_chr5_+_65372744_65372866	0.299039	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr14_-_35344080_35344137	0.29838	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr17_-_56065474_56065594	0.29831	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr1_+_100818007_100818027	0.29788	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr5_-_137514299_137514368	0.297519	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg19_v1_chr20_-_44718545_44718562	0.296904	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr1_+_22778347_22778505	0.296706	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr17_-_1248346_1248366	0.296482	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr15_-_23932364_23932396	0.296469	SOX2.p2	
hg19_v1_chr16_+_58497548_58497612	0.296393	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr6_+_157099873_157099878	0.295512	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg19_v1_chr20_-_5100443_5100668	0.295503	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr15_+_52043738_52043908	0.295239	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg19_v1_chr12_-_30830143_30830177	0.295055	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg19_v1_chr4_-_54457723_54457765	0.295049	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr13_-_75901897_75901948	0.294741	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr7_-_130792839_130792879	0.294738	SOX2.p2	BC047367|FLJ43663|378805|uncharacterized LOC378805
hg19_v1_chr15_-_37393364_37393521	0.294061	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_001220482|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg19_v1_chr7_+_74072055_74072190	0.293762	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg19_v1_chr2_+_181845368_181845372	0.292207	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr5_+_42548314_42548314	0.291982	SOX2.p2	NM_001242403|GHR|2690|growth hormone receptor	Z11802|GHR|2690|growth hormone receptor
hg19_v1_chr1_-_76397975_76398115	0.291532	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg19_v1_chr7_+_77167351_77167385	0.291375	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr3_-_160101443_160101553	0.291237	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v1_chr19_+_39899749_39899837	0.290905	SOX2.p2	
hg19_v1_chr1_-_246580710_246580713	0.290597	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg19_v1_chr12_-_71148383_71148538	0.289829	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr15_+_72766689_72766744	0.28974	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr2_+_181845088_181845363	0.289051	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr16_-_4562979_4563123	0.289027	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr21_+_33784751_33784751	0.288843	SOX2.p2	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63
hg19_v1_chr11_+_129940462_129940462	0.288375	SOX2.p2	AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chrX_-_135962872_135962916	0.287924	SOX2.p2	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr9_+_103235634_103235825	0.287414	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr22_+_21271619_21271720	0.28697	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr22_+_19701968_19702117	0.286036	SOX2.p2	NM_002688|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg19_v1_chr5_-_137475076_137475131	0.284522	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr12_+_48876285_48876285	0.284289	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg19_v1_chr17_+_48821106_48821114	0.28425	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg19_v1_chr9_+_12774988_12775045	0.283472	SOX2.p2	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg19_v1_chr7_+_105603656_105603741	0.283461	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg19_v1_chr7_-_28998028_28998036	0.283326	SOX2.p2	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr19_+_1269244_1269366	0.283166	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein
hg19_v1_chr14_-_23288912_23289019	0.28261	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v1_chr8_+_61429551_61429578	0.282069	SOX2.p2	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr14_-_21852085_21852160	0.281931	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr10_-_72142344_72142385	0.281286	SOX2.p2	AK094734|LRRC20|55222|leucine rich repeat containing 20	AK001613|LRRC20|55222|leucine rich repeat containing 20	AK001706|LRRC20|55222|leucine rich repeat containing 20	NM_018205|LRRC20|55222|leucine rich repeat containing 20	NM_018239|LRRC20|55222|leucine rich repeat containing 20
hg19_v1_chr3_-_48754589_48754710	0.280846	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg19_v1_chr16_-_90085786_90086013	0.280519	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg19_v1_chr1_+_12834983_12834983	0.279541	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg19_v1_chr8_+_103563847_103563876	0.279101	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg19_v1_chr19_-_49865638_49865713	0.278449	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg19_v1_chr3_-_114343791_114343798	0.278137	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr2_-_73964427_73964516	0.278084	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg19_v1_chr9_+_133971862_133971894	0.277939	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg19_v1_chr2_+_153191830_153192116	0.277438	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg19_v1_chr2_+_1418179_1418180	0.276255	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg19_v1_chr12_+_94071150_94071217	0.27594	SOX2.p2	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v1_chr6_+_56911422_56911552	0.275759	SOX2.p2	BC012011|KIAA1586|57691|KIAA1586	BC029372|KIAA1586|57691|KIAA1586	AK295519|KIAA1586|57691|KIAA1586	AK290988|KIAA1586|57691|KIAA1586
hg19_v1_chrX_+_41192650_41192650	0.275734	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr20_+_32250089_32250141	0.275328	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg19_v1_chr11_-_18062304_18062334	0.274745	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg19_v1_chr18_+_77253324_77253436	0.274646	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg19_v1_chr1_+_36348813_36348815	0.273821	SOX2.p2	BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr16_-_28550227_28550317	0.273195	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg19_v1_chr1_-_85930610_85930640	0.27309	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr14_-_54955664_54955707	0.272773	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chr12_-_21757752_21757780	0.2724	SOX2.p2	AK308373|GYS2|2998|glycogen synthase 2 (liver)	D29685|GYS2|2998|glycogen synthase 2 (liver)	NM_021957|GYS2|2998|glycogen synthase 2 (liver)
hg19_v1_chr17_+_63133501_63133658	0.272231	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg19_v1_chr10_+_105005643_105005704	0.271697	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg19_v1_chr3_-_112359863_112359904	0.271133	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr11_-_102714240_102714353	0.27103	SOX2.p2	DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v1_chr13_+_50025687_50025774	0.271011	SOX2.p2	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg19_v1_chr14_-_90085325_90085866	0.270944	SOX2.p2	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg19_v1_chr3_-_114478117_114478123	0.270455	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr21_-_31859666_31859754	0.269828	SOX2.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg19_v1_chr7_+_134464372_134464407	0.269282	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr14_-_21852161_21852178	0.269175	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr1_-_153606567_153606567	0.26835	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr10_+_81073763_81073916	0.267799	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg19_v1_chrX_+_18709044_18709045	0.267538	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr18_+_3447607_3447627	0.267406	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr4_+_123747815_123747873	0.266656	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg19_v1_chr7_-_28997907_28997952	0.266313	SOX2.p2	AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats	BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr5_-_171710794_171710837	0.266082	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg19_v1_chr11_+_128563772_128563824	0.26584	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr16_-_11375094_11375191	0.265703	SOX2.p2	BT006746|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1
hg19_v1_chr17_-_48271968_48272123	0.265185	SOX2.p2	
hg19_v1_chr6_+_139094656_139094925	0.264601	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr10_-_21814610_21814610	0.263561	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg19_v1_chr12_-_10022457_10022457	0.262844	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr2_-_238499317_238499375	0.262834	SOX2.p2	BC009827|RAB17|64284|RAB17, member RAS oncogene family	BC050426|RAB17|64284|RAB17, member RAS oncogene family	AL136645|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr5_+_140571903_140572125	0.262814	SOX2.p2	AK056391|PCDHB10|56126|protocadherin beta 10	BC031837|PCDHB10|56126|protocadherin beta 10	NM_018930|PCDHB10|56126|protocadherin beta 10	AY358720|PCDHB10|56126|protocadherin beta 10	AF152489|PCDHB10|56126|protocadherin beta 10	AF217748|PCDHB10|56126|protocadherin beta 10
hg19_v1_chr3_-_187452669_187452694	0.26236	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg19_v1_chr3_+_183770834_183770843	0.262109	SOX2.p2	AF459285|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	NM_130770|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	BC131799|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C
hg19_v1_chr5_+_180794268_180794287	0.261498	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chr14_+_21152335_21152371	0.261338	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr1_+_76540374_76540550	0.260063	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v1_chr15_+_72766665_72766670	0.25968	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr2_-_9143742_9143901	0.259645	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg19_v1_chr9_+_91926109_91926207	0.259391	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr2_-_152590983_152591000	0.259387	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg19_v1_chr20_-_43150686_43150729	0.25925	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg19_v1_chr8_+_9911797_9911961	0.259023	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr18_+_63417487_63417487	0.258934	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg19_v1_chr11_+_46402333_46402617	0.258927	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr19_+_12780516_12780603	0.258572	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg19_v1_chr3_+_182970853_182971044	0.257731	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr5_-_133747592_133747607	0.256394	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg19_v1_chr11_+_89392464_89392464	0.256088	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg19_v1_chr5_+_162930230_162930347	0.255809	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta
hg19_v1_chr3_-_139258373_139258472	0.255784	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr10_-_123687380_123687671	0.255747	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg19_v1_chr1_-_173962050_173962209	0.25533	SOX2.p2	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg19_v1_chr11_-_124310980_124311053	0.254707	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg19_v1_chr2_-_198299739_198299763	0.254542	SOX2.p2	BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg19_v1_chr9_-_129870311_129870393	0.254455	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg19_v1_chr18_+_11851388_11851510	0.253857	SOX2.p2	NM_020412|CHMP1B|57132|charged multivesicular body protein 1B	AK314068|CHMP1B|57132|charged multivesicular body protein 1B	BC065933|CHMP1B|57132|charged multivesicular body protein 1B	BC012733|CHMP1B|57132|charged multivesicular body protein 1B	AF281064|CHMP1B|57132|charged multivesicular body protein 1B
hg19_v1_chr1_+_100818052_100818155	0.253683	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chrX_-_2847351_2847426	0.253156	SOX2.p2	AK314479|ARSD|414|arylsulfatase D	AK021472|ARSD|414|arylsulfatase D	X83572|ARSD|414|arylsulfatase D	NM_001669|ARSD|414|arylsulfatase D
hg19_v1_chr9_-_5968367_5968450	0.253035	SOX2.p2	
hg19_v1_chr8_+_80523351_80523367	0.252913	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2
hg19_v1_chr13_-_76055872_76056805	0.252724	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr22_+_27068690_27068790	0.252257	SOX2.p2	AK026502|LOC100507637|100507637|uncharacterized LOC100507637
hg19_v1_chr2_+_38155901_38155901	0.252153	SOX2.p2	BC024243|FAM82A1|151393|family with sequence similarity 82, member A1	NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1
hg19_v1_chr10_-_25241504_25241561	0.251665	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg19_v1_chr17_-_42992852_42992919	0.251115	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr13_+_34392254_34392315	0.250968	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr5_+_148961035_148961134	0.250619	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v1_chrX_-_55057408_55057496	0.250378	SOX2.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr15_-_23932410_23932455	0.249675	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)
hg19_v1_chr7_-_143599163_143599367	0.24963	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A	NM_001206938|FAM115A|9747|family with sequence similarity 115, member A
hg19_v1_chrX_+_106171328_106171458	0.24913	SOX2.p2	AY358474|CLDN2|9075|claudin 2	BC014424|CLDN2|9075|claudin 2	DQ892216|CLDN2|9075|claudin 2	DQ895412|CLDN2|9075|claudin 2	AF250558|CLDN2|9075|claudin 2
hg19_v1_chr9_-_36400212_36400295	0.249048	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr16_+_67063214_67063363	0.24885	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg19_v1_chrX_-_112066353_112066353	0.248374	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr16_-_46865039_46865137	0.248276	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg19_v1_chr9_-_98268866_98268881	0.247932	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233423|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg19_v1_chr1_+_159259503_159259503	0.247819	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg19_v1_chr3_+_14860468_14860468	0.247482	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg19_v1_chr3_+_19988530_19988849	0.24739	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr12_-_59314297_59314307	0.246771	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v1_chr5_-_138211054_138211064	0.246597	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr7_+_101459092_101459327	0.246336	SOX2.p2	NM_001202543|CUX1|1523|cut-like homeobox 1	NM_001202544|CUX1|1523|cut-like homeobox 1	NM_001202545|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	NM_001202546|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1
hg19_v1_chr5_-_176937337_176937428	0.246044	SOX2.p2	AK097258|DOK3|79930|docking protein 3	BC004564|DOK3|79930|docking protein 3	NM_001144875|DOK3|79930|docking protein 3	NM_001144876|DOK3|79930|docking protein 3
hg19_v1_chr4_-_110624550_110624632	0.245931	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg19_v1_chr19_+_47421932_47421932	0.245342	SOX2.p2	AB051509|ARHGAP35|2909|Rho GTPase activating protein 35	AF159851|ARHGAP35|2909|Rho GTPase activating protein 35	BC131565|ARHGAP35|2909|Rho GTPase activating protein 35	BC150257|ARHGAP35|2909|Rho GTPase activating protein 35	NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35
hg19_v1_chr12_+_72079873_72079886	0.245206	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg19_v1_chr11_-_119066583_119066583	0.245074	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg19_v1_chr14_-_23904849_23904870	0.244792	SOX2.p2	M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta
hg19_v1_chr15_-_83876769_83876824	0.244782	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr10_-_13390189_13390345	0.244666	SOX2.p2	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr16_+_29086269_29086342	0.244311	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg19_v1_chr2_+_204571379_204571419	0.244234	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg19_v1_chr14_-_60097314_60097374	0.243501	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr2_+_202047620_202047620	0.242976	SOX2.p2	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr12_+_12938540_12938614	0.242207	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg19_v1_chr14_+_71996041_71996041	0.241673	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr4_+_52709165_52709408	0.241283	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg19_v1_chr6_+_17282931_17283077	0.240571	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr3_-_151034514_151034635	0.240205	SOX2.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg19_v1_chr14_-_35182944_35183033	0.239871	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg19_v1_chr2_-_171923482_171923482	0.239293	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg19_v1_chr17_+_56769953_56770049	0.238835	SOX2.p2	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chr7_+_96745904_96745904	0.238662	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg19_v1_chr12_+_8666135_8666328	0.238547	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg19_v1_chrX_-_33229428_33229672	0.238479	SOX2.p2	S60972|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg19_v1_chr12_-_54121203_54121306	0.238308	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg19_v1_chr1_+_229440128_229440128	0.237831	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg19_v1_chrX_+_103357106_103357262	0.237598	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg19_v1_chr7_-_106301329_106301678	0.237364	SOX2.p2	AK093350|C7orf74|168455|chromosome 7 open reading frame 74	BC013906|C7orf74|168455|chromosome 7 open reading frame 74	NM_175884|C7orf74|168455|chromosome 7 open reading frame 74
hg19_v1_chr21_-_31869427_31869471	0.237311	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	HQ258034|KRTAP19-4|337971|keratin associated protein 19-4	HQ258698|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg19_v1_chr12_+_7055753_7055888	0.237117	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr17_-_47755340_47755524	0.236522	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chr5_+_140557370_140557370	0.2363	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg19_v1_chr10_+_102123420_102123604	0.236245	SOX2.p2	
hg19_v1_chr14_-_35344490_35344525	0.235649	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr11_+_22696318_22696354	0.235629	SOX2.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg19_v1_chr14_-_95608054_95608054	0.235598	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr1_-_156217717_156217863	0.235562	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI
hg19_v1_chr3_-_18466759_18466836	0.235384	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg19_v1_chr10_+_97471535_97471535	0.234966	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr1_+_182808436_182808478	0.234671	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr11_+_13690230_13690244	0.234296	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr19_+_3572958_3572999	0.234291	SOX2.p2	AK314201|HMG20B|10362|high mobility group 20B	AK090733|HMG20B|10362|high mobility group 20B	AK310601|HMG20B|10362|high mobility group 20B	AF318366|HMG20B|10362|high mobility group 20B
hg19_v1_chr12_-_54653369_54653373	0.234243	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chr3_+_58223415_58223646	0.234089	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr9_+_22113542_22113676	0.233869	SOX2.p2	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)
hg19_v1_chr12_+_50898744_50898767	0.233242	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v1_chr11_-_102323353_102323874	0.23312	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg19_v1_chr12_-_102455739_102455761	0.232574	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr14_-_35344526_35344549	0.231311	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr9_-_113100076_113100124	0.229798	SOX2.p2	HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)
hg19_v1_chr4_-_26491888_26492083	0.229797	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg19_v1_chr3_-_150996153_150996229	0.229032	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg19_v1_chr17_+_28705922_28705957	0.22881	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg19_v1_chr4_+_160188997_160188997	0.228559	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v1_chr1_+_109419748_109419826	0.22852	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr2_-_27579277_27579386	0.2271	SOX2.p2	BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v1_chr4_+_30722191_30722198	0.226802	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg19_v1_chr10_-_91011586_91011659	0.226724	SOX2.p2	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr17_+_72427535_72427674	0.226621	SOX2.p2	BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg19_v1_chr6_+_17600504_17600695	0.226538	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg19_v1_chr4_+_88343702_88344056	0.226039	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr8_+_79428335_79428335	0.225835	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v1_chr6_+_87865261_87865318	0.225534	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg19_v1_chr11_+_65266642_65266956	0.225507	SOX2.p2	
hg19_v1_chr15_-_41166336_41166558	0.224729	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg19_v1_chr1_-_21113147_21113158	0.224429	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr2_-_188419185_188419218	0.223673	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v1_chr8_+_61429494_61429494	0.223566	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr8_+_107460151_107460151	0.223191	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr17_-_37557851_37557949	0.2226	SOX2.p2	BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20	DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20
hg19_v1_chr5_-_88178964_88179049	0.222475	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr9_+_36036900_36036994	0.222457	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v1_chr7_-_19812403_19812403	0.222429	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg19_v1_chr5_-_32388687_32388762	0.220939	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr1_-_235491448_235491487	0.220365	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr14_+_39649711_39649842	0.220338	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg19_v1_chr12_-_10282680_10282867	0.220229	SOX2.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg19_v1_chr8_-_7681359_7681411	0.21989	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg19_v1_chr17_+_73553883_73553887	0.219532	SOX2.p2	AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)
hg19_v1_chr8_+_7345190_7345242	0.219231	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg19_v1_chr19_+_58790306_58790446	0.218946	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg19_v1_chr11_+_114271372_114271432	0.218691	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chrX_-_100872926_100872990	0.218644	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr9_-_86082656_86082663	0.218009	SOX2.p2	NM_001244960|FRMD3|257019|FERM domain containing 3	AY137774|FRMD3|257019|FERM domain containing 3
hg19_v1_chr2_-_200325200_200325283	0.217853	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr7_+_91570150_91570412	0.217471	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg19_v1_chr12_+_120933832_120933903	0.217277	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr6_+_16143281_16143339	0.217131	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg19_v1_chrX_-_73512376_73512434	0.216743	SOX2.p2	AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)
hg19_v1_chr2_+_202047803_202047917	0.216523	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr7_-_99679192_99679462	0.216241	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg19_v1_chr6_-_28304151_28304151	0.216215	SOX2.p2	NM_001243241|ZNF323|64288|zinc finger protein 323	NM_001243242|ZNF323|64288|zinc finger protein 323	NM_001243244|ZNF323|64288|zinc finger protein 323	NM_030899|ZNF323|64288|zinc finger protein 323
hg19_v1_chr6_-_79787887_79787890	0.216003	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr14_+_64971417_64971470	0.215868	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr5_-_9630462_9630462	0.215849	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg19_v1_chr3_+_159557745_159557973	0.215437	SOX2.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr11_-_6676851_6677075	0.215424	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg19_v1_chr3_-_14988939_14988974	0.215015	SOX2.p2	BC014104|LOC100505641|100505641|uncharacterized LOC100505641	BC063441|LOC100505641|100505641|uncharacterized LOC100505641	BC039246|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr7_-_92855780_92855786	0.214719	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr12_+_120933916_120933953	0.214139	SOX2.p2	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr1_+_198608216_198608234	0.214098	SOX2.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr19_+_3572950_3572957	0.214019	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr2_-_20512016_20512083	0.213649	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr19_+_3572903_3572949	0.213493	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr9_-_86536283_86536495	0.213418	SOX2.p2	AK297689|KIF27|55582|kinesin family member 27	BC140788|KIF27|55582|kinesin family member 27	AY237536|KIF27|55582|kinesin family member 27	AY237537|KIF27|55582|kinesin family member 27	AY237538|KIF27|55582|kinesin family member 27	NM_017576|KIF27|55582|kinesin family member 27
hg19_v1_chr17_+_73452663_73452813	0.213088	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg19_v1_chr2_+_189839078_189839111	0.213061	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr15_+_77287688_77287725	0.212718	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr18_-_72920989_72921013	0.212463	SOX2.p2	
hg19_v1_chr16_+_15528324_15528477	0.212304	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chr2_+_128928040_128928054	0.212209	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v1_chr14_-_38725253_38725315	0.211673	SOX2.p2	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg19_v1_chr8_-_95961543_95961772	0.211593	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg19_v1_chr11_-_119234859_119234906	0.210299	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr14_-_88459459_88459468	0.210012	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg19_v1_chr3_+_182971213_182971343	0.209614	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr8_+_70405080_70405098	0.209299	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg19_v1_chr7_+_2671630_2671777	0.209286	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr12_-_62997207_62997213	0.208905	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg19_v1_chr9_-_4726226_4726249	0.208644	SOX2.p2	NM_001199856|AK3|50808|adenylate kinase 3	AK124824|AK3|50808|adenylate kinase 3
hg19_v1_chr19_-_14629227_14629233	0.208327	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr18_+_3453771_3453771	0.207478	SOX2.p2	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr5_+_55062712_55062738	0.206506	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr12_+_109535922_109536131	0.205832	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg19_v1_chr12_-_71148331_71148370	0.205677	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr5_+_42565963_42565965	0.2055	SOX2.p2	BC136496|GHR|2690|growth hormone receptor	NM_001242460|GHR|2690|growth hormone receptor	NM_001242461|GHR|2690|growth hormone receptor	NM_001242462|GHR|2690|growth hormone receptor
hg19_v1_chr3_+_57994087_57994207	0.205265	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg19_v1_chr15_-_77154284_77154284	0.205154	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg19_v1_chr7_+_74072007_74072036	0.205034	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg19_v1_chr5_+_140625146_140625146	0.205012	SOX2.p2	AF152494|PCDHB15|56121|protocadherin beta 15	AF217742|PCDHB15|56121|protocadherin beta 15	DQ893315|PCDHB15|56121|protocadherin beta 15	DQ896630|PCDHB15|56121|protocadherin beta 15	NM_018935|PCDHB15|56121|protocadherin beta 15
hg19_v1_chr11_+_63706433_63706535	0.205002	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg19_v1_chr3_-_125775609_125775617	0.204688	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr3_-_105587710_105587905	0.204668	SOX2.p2	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg19_v1_chr10_+_115511212_115511212	0.204522	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chrX_-_2882288_2882493	0.204349	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg19_v1_chr13_-_31040035_31040081	0.203576	SOX2.p2	AK057120|HMGB1|3146|high mobility group box 1	AK310975|HMGB1|3146|high mobility group box 1	AK291494|HMGB1|3146|high mobility group box 1	AK304506|HMGB1|3146|high mobility group box 1	NM_002128|HMGB1|3146|high mobility group box 1
hg19_v1_chr19_+_34175433_34175433	0.203077	SOX2.p2	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg19_v1_chr14_-_88459469_88459650	0.203047	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001201401|GALC|2581|galactosylceramidase
hg19_v1_chr12_+_12869818_12870435	0.202805	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v1_chr12_-_46766019_46766560	0.201119	SOX2.p2	AK291644|SLC38A2|54407|solute carrier family 38, member 2	BC040342|SLC38A2|54407|solute carrier family 38, member 2	AK001700|SLC38A2|54407|solute carrier family 38, member 2	AJ344099|SLC38A2|54407|solute carrier family 38, member 2	AF298897|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr5_+_140593508_140593537	0.200643	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg19_v1_chr14_-_81405883_81405883	0.200618	SOX2.p2	NM_152446|CEP128|145508|centrosomal protein 128kDa
hg19_v1_chr3_+_186915273_186915411	0.199447	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg19_v1_chr12_-_91573264_91573358	0.19942	SOX2.p2	AK291309|DCN|1634|decorin	BX571756|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg19_v1_chr6_+_123109970_123109970	0.199352	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr9_+_103235489_103235519	0.199131	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr5_+_147648374_147648422	0.198676	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr12_-_53558276_53558276	0.198498	SOX2.p2	AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase	NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase
hg19_v1_chr11_+_118175294_118175667	0.198479	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg19_v1_chr2_-_128421965_128422166	0.198237	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr11_-_71781091_71781137	0.198048	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr9_-_139658959_139658964	0.197872	SOX2.p2	BC093893|LCN15|389812|lipocalin 15	BC093895|LCN15|389812|lipocalin 15	AY358618|LCN15|389812|lipocalin 15	NM_203347|LCN15|389812|lipocalin 15
hg19_v1_chr22_-_18923654_18923809	0.197097	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg19_v1_chr12_-_54653317_54653332	0.196895	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr5_+_134303595_134303635	0.196648	SOX2.p2	BC110384|CATSPER3|347732|cation channel, sperm associated 3	NM_178019|CATSPER3|347732|cation channel, sperm associated 3	AK292427|CATSPER3|347732|cation channel, sperm associated 3	AF432876|CATSPER3|347732|cation channel, sperm associated 3	BC101692|CATSPER3|347732|cation channel, sperm associated 3
hg19_v1_chr1_+_200708604_200708738	0.196144	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr11_+_46299585_46299662	0.19596	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg19_v1_chr11_+_7273141_7273246	0.195912	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg19_v1_chr5_-_134734886_134734891	0.195478	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr6_+_130339715_130339735	0.195465	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg19_v1_chr1_-_16161279_16161390	0.195462	SOX2.p2	
hg19_v1_chr16_+_69141442_69141442	0.195376	SOX2.p2	AF234839|HAS3|3038|hyaluronan synthase 3	NM_005329|HAS3|3038|hyaluronan synthase 3
hg19_v1_chr7_+_111846642_111846702	0.195298	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg19_v1_chr1_+_22778343_22778346	0.195115	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr14_+_75283664_75283737	0.194397	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg19_v1_chr21_-_34143978_34144171	0.194369	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg19_v1_chr5_+_36606456_36606456	0.194077	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr4_+_141178439_141178439	0.193787	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg19_v1_chr4_+_119947816_119947855	0.193688	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg19_v1_chr19_+_40194945_40195141	0.193605	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg19_v1_chr6_-_108582307_108582463	0.193533	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chr3_-_151058439_151058584	0.193203	SOX2.p2	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg19_v1_chr7_+_73868397_73868474	0.192941	SOX2.p2	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr17_-_18950238_18950335	0.192598	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein
hg19_v1_chr6_+_39760138_39760141	0.192295	SOX2.p2	
hg19_v1_chr1_-_224621714_224621807	0.192269	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg19_v1_chr1_+_27023932_27024006	0.192133	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr4_-_149363498_149363671	0.19198	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg19_v1_chr3_-_129158675_129158761	0.191819	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr12_-_102874340_102874344	0.191721	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr14_-_24777160_24777176	0.191565	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr8_+_86376130_86376310	0.191519	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	AF015039|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg19_v1_chr16_-_1832571_1832575	0.191063	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr13_+_78315294_78315518	0.1906	SOX2.p2	NM_001242869|SLAIN1|122060|SLAIN motif family, member 1	NM_001242870|SLAIN1|122060|SLAIN motif family, member 1	NM_001242871|SLAIN1|122060|SLAIN motif family, member 1	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg19_v1_chr3_-_149510609_149510609	0.190176	SOX2.p2	BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1	NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1
hg19_v1_chr15_+_57210889_57210915	0.189719	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg19_v1_chr16_-_15188089_15188167	0.189693	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg19_v1_chr7_+_2598611_2598644	0.189529	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg19_v1_chr12_+_69979447_69979652	0.189427	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr13_+_76210449_76210492	0.189338	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg19_v1_chr1_-_224622000_224622000	0.189322	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg19_v1_chr14_-_90421032_90421088	0.189184	SOX2.p2	BC001787|EFCAB11|90141|EF-hand calcium binding domain 11	BX247991|EFCAB11|90141|EF-hand calcium binding domain 11	AK298930|EFCAB11|90141|EF-hand calcium binding domain 11	AK094740|EFCAB11|90141|EF-hand calcium binding domain 11	NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11
hg19_v1_chr4_-_83347778_83347787	0.189021	SOX2.p2	AK057480|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr12_+_7055736_7055739	0.18899	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr3_-_48601200_48601221	0.188886	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg19_v1_chr8_-_124749573_124749665	0.188546	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr15_+_31619043_31619633	0.188381	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg19_v1_chrX_+_101854095_101854275	0.188059	SOX2.p2	AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5	BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough
hg19_v1_chr6_-_33168438_33168438	0.187688	SOX2.p2	AK301096|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr12_-_106532447_106532918	0.187658	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr4_-_88312221_88312322	0.187558	SOX2.p2	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg19_v1_chr2_-_31352489_31352505	0.18753	SOX2.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr11_-_66115016_66115166	0.187134	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v1_chr11_-_14386051_14386051	0.187078	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr19_+_30863318_30863443	0.18694	SOX2.p2	BC150171|ZNF536|9745|zinc finger protein 536	AB002388|ZNF536|9745|zinc finger protein 536	BC146757|ZNF536|9745|zinc finger protein 536	NM_014717|ZNF536|9745|zinc finger protein 536	BC132720|ZNF536|9745|zinc finger protein 536	BC132722|ZNF536|9745|zinc finger protein 536
hg19_v1_chr12_-_48119224_48119354	0.186694	SOX2.p2	AK314688|ENDOU|8909|endonuclease, polyU-specific	BC069715|ENDOU|8909|endonuclease, polyU-specific	BC069698|ENDOU|8909|endonuclease, polyU-specific	BC074763|ENDOU|8909|endonuclease, polyU-specific	AX772808|ENDOU|8909|endonuclease, polyU-specific	AK300169|ENDOU|8909|endonuclease, polyU-specific	AK075446|ENDOU|8909|endonuclease, polyU-specific	BC111782|ENDOU|8909|endonuclease, polyU-specific	M32402|ENDOU|8909|endonuclease, polyU-specific	M36109|ENDOU|8909|endonuclease, polyU-specific	NM_001172439|ENDOU|8909|endonuclease, polyU-specific	NM_001172440|ENDOU|8909|endonuclease, polyU-specific	NM_006025|ENDOU|8909|endonuclease, polyU-specific
hg19_v1_chr2_+_85360373_85360946	0.186675	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v1_chr11_+_13690151_13690229	0.18649	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr5_-_137089990_137090031	0.186378	SOX2.p2	U23803|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC019271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC001008|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC011972|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr3_-_129158779_129158816	0.186348	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr10_-_17171789_17171878	0.186255	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr7_+_22766765_22766881	0.186043	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr9_+_15422630_15422786	0.185909	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr8_+_74207093_74207445	0.185837	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg19_v1_chr1_+_109419601_109419621	0.185394	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr4_+_128554079_128554200	0.185284	SOX2.p2	NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)
hg19_v1_chr7_+_77469446_77469572	0.185265	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chrX_+_24712063_24712067	0.185199	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v1_chr1_-_109935869_109935978	0.184569	SOX2.p2	AK310147|SORT1|6272|sortilin 1	AK301548|SORT1|6272|sortilin 1	NM_001205228|SORT1|6272|sortilin 1
hg19_v1_chr7_-_26232148_26232154	0.184535	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr12_+_32260084_32260263	0.1841	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg19_v1_chr3_-_129158849_129158894	0.183767	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr3_+_196466806_196466845	0.183415	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v1_chr4_-_89080010_89080065	0.183237	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr19_-_46272102_46272128	0.18322	SOX2.p2	
hg19_v1_chr6_+_44355440_44355560	0.182947	SOX2.p2	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)
hg19_v1_chr4_-_88312329_88312454	0.182907	SOX2.p2	AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg19_v1_chr3_+_157827937_157827944	0.182186	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr13_-_31039966_31040021	0.181622	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr4_-_54457628_54457659	0.181468	SOX2.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr18_-_21891469_21891469	0.181404	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr4_+_76649826_76650003	0.181368	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr10_+_35535952_35535952	0.18109	SOX2.p2	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg19_v1_chr3_-_14989857_14989930	0.180868	SOX2.p2	AK096279|LOC100505641|100505641|uncharacterized LOC100505641	BC033386|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr11_-_78052925_78052925	0.1808	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chr2_+_208394615_208394671	0.180138	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr6_+_87969619_87969709	0.18003	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg19_v1_chr16_-_77468930_77469010	0.179961	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg19_v1_chr17_-_1412995_1413071	0.179573	SOX2.p2	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K
hg19_v1_chr14_-_23445885_23445986	0.17918	SOX2.p2	AK025567|AJUBA|84962|ajuba LIM protein
hg19_v1_chr8_+_11660207_11660269	0.179149	SOX2.p2	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr6_-_79787939_79788175	0.178977	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr9_-_97402530_97402546	0.178933	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg19_v1_chr10_+_225932_225961	0.178827	SOX2.p2	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11	X86098|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11	AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr4_-_87028805_87028805	0.178738	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr1_+_173684061_173684131	0.177952	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr5_+_125967405_125967426	0.177629	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48	HQ258080|C5orf48|389320|chromosome 5 open reading frame 48
hg19_v1_chr16_+_69726751_69726828	0.177613	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v1_chr20_+_31755882_31755959	0.177525	SOX2.p2	AK291854|BPIFA2|140683|BPI fold containing family A, member 2	BC065726|BPIFA2|140683|BPI fold containing family A, member 2	NM_080574|BPIFA2|140683|BPI fold containing family A, member 2
hg19_v1_chr17_-_76124791_76124886	0.177505	SOX2.p2	AK096076|TMC6|11322|transmembrane channel-like 6	AY099356|TMC6|11322|transmembrane channel-like 6	AY099357|TMC6|11322|transmembrane channel-like 6	AK303584|TMC6|11322|transmembrane channel-like 6	AK310734|TMC6|11322|transmembrane channel-like 6	NM_001127198|TMC6|11322|transmembrane channel-like 6	AK021738|TMC6|11322|transmembrane channel-like 6
hg19_v1_chr11_-_130184314_130184349	0.176923	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg19_v1_chr2_-_190627923_190627952	0.176775	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg19_v1_chr12_-_30848744_30848797	0.176738	SOX2.p2	U77494|IPO8|10526|importin 8
hg19_v1_chr4_+_123091757_123091757	0.176464	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg19_v1_chr1_-_182360400_182360677	0.176274	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr16_-_15835382_15835512	0.176004	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg19_v1_chr17_+_3377346_3377403	0.175563	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr5_-_22853730_22853730	0.17519	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr3_-_15540378_15540378	0.175084	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v1_chr1_+_167064086_167064086	0.175067	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg19_v1_chr11_-_104769396_104769396	0.175007	SOX2.p2	AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)	NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)
hg19_v1_chr21_-_35014013_35014159	0.17487	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chr19_-_11305186_11305265	0.17465	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg19_v1_chr10_+_105727469_105727505	0.173961	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg19_v1_chr11_+_65271145_65271876	0.173924	SOX2.p2	
hg19_v1_chr3_-_149095517_149095567	0.173793	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr2_+_149633173_149633186	0.173581	SOX2.p2	
hg19_v1_chr16_+_127017_127017	0.173399	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg19_v1_chr17_-_62914902_62914902	0.173394	SOX2.p2	AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3	NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg19_v1_chr11_-_61129352_61129360	0.173382	SOX2.p2	AK075559|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr22_-_23484208_23484279	0.172841	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg19_v1_chr11_-_118889039_118889078	0.172617	SOX2.p2	BC004986|RPS25|6230|ribosomal protein S25	AK311883|RPS25|6230|ribosomal protein S25	M64716|RPS25|6230|ribosomal protein S25	D28369|RPS25|6230|ribosomal protein S25	NM_001028|RPS25|6230|ribosomal protein S25
hg19_v1_chr18_-_22930826_22931470	0.172462	SOX2.p2	
hg19_v1_chr2_+_201997687_201997758	0.172251	SOX2.p2	NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator
hg19_v1_chr12_-_24103953_24103970	0.172104	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr2_-_238499713_238499768	0.171916	SOX2.p2	BC023661|RAB17|64284|RAB17, member RAS oncogene family	AK225423|RAB17|64284|RAB17, member RAS oncogene family	AK022600|RAB17|64284|RAB17, member RAS oncogene family	NM_022449|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr7_-_14030864_14030873	0.171895	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg19_v1_chr7_+_73868236_73868380	0.171341	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr6_+_32939371_32939371	0.170862	SOX2.p2	NM_001199455|BRD2|6046|bromodomain containing 2
hg19_v1_chr12_-_31477080_31477095	0.170655	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg19_v1_chr2_-_198299766_198299804	0.17042	SOX2.p2	BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg19_v1_chr17_+_57297827_57297970	0.170216	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v1_chr14_-_91884138_91884159	0.169845	SOX2.p2	AF070587|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr8_+_61429543_61429550	0.169786	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr18_+_72998258_72998426	0.169461	SOX2.p2	AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1	BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1
hg19_v1_chr3_-_165555167_165555220	0.169148	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr8_+_11660179_11660189	0.169119	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr15_-_83876165_83876664	0.169028	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr1_+_53480573_53480613	0.168783	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg19_v1_chr14_+_65878579_65878661	0.168541	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr2_-_100722259_100722277	0.168248	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr6_-_16761600_16761794	0.168073	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg19_v1_chr18_-_74728963_74729028	0.168065	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr4_-_152147520_152147659	0.16792	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr17_-_42264023_42264073	0.167542	SOX2.p2	AK055685|C17orf65|339201|chromosome 17 open reading frame 65
hg19_v1_chr2_-_198299722_198299737	0.16746	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg19_v1_chr17_-_43510204_43510250	0.167067	SOX2.p2	AK290650|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr7_-_108142934_108143010	0.167041	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg19_v1_chr11_-_73693883_73693888	0.166955	SOX2.p2	AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)
hg19_v1_chrX_+_145891301_145891301	0.166874	SOX2.p2	NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A	NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B
hg19_v1_chr7_+_116502529_116502585	0.166604	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr8_+_10530146_10530173	0.166545	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74	HQ258143|C8orf74|203076|chromosome 8 open reading frame 74
hg19_v1_chr3_-_149095333_149095399	0.166024	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr7_-_15601574_15601639	0.165937	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg19_v1_chr10_-_105110844_105110876	0.165794	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr11_-_61584228_61584375	0.165492	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr20_-_30288094_30288101	0.165065	SOX2.p2	
hg19_v1_chr16_-_19533285_19533468	0.164997	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg19_v1_chr4_+_15480833_15480865	0.164955	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr1_+_36748164_36748236	0.164935	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg19_v1_chr9_-_36401149_36401201	0.164833	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg19_v1_chr22_-_22089975_22090122	0.164639	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg19_v1_chrX_-_50557019_50557203	0.164498	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg19_v1_chr2_+_32288579_32288822	0.164435	SOX2.p2	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg19_v1_chr13_+_48877886_48877886	0.164399	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg19_v1_chr10_-_22498911_22498911	0.164099	SOX2.p2	NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1
hg19_v1_chr22_-_38840032_38840032	0.163402	SOX2.p2	NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4
hg19_v1_chr18_-_32924381_32924416	0.162851	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg19_v1_chr17_-_4269610_4269812	0.162344	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr3_-_165555252_165555283	0.16228	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr9_+_18474138_18474228	0.161884	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr17_-_42264075_42264107	0.161698	SOX2.p2	NM_178542|C17orf65|339201|chromosome 17 open reading frame 65
hg19_v1_chrX_+_150151757_150151857	0.161313	SOX2.p2	BX537505|HMGB3|3149|high mobility group box 3	NM_005342|HMGB3|3149|high mobility group box 3	Y10043|HMGB3|3149|high mobility group box 3	BC070482|HMGB3|3149|high mobility group box 3
hg19_v1_chr12_-_11184005_11184005	0.160661	SOX2.p2	NM_176885|TAS2R31|259290|taste receptor, type 2, member 31
hg19_v1_chr2_+_169312755_169312764	0.160225	SOX2.p2	AK172775|CERS6|253782|ceramide synthase 6
hg19_v1_chr3_+_159557649_159557738	0.160225	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr2_-_161056573_161056601	0.15992	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg19_v1_chr10_+_114709963_114710641	0.15982	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v1_chr5_+_140797270_140797426	0.159523	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr16_+_31494438_31494438	0.159034	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg19_v1_chr15_-_74726000_74726058	0.158745	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v1_chr5_-_179044835_179044916	0.158573	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr4_-_83351294_83351413	0.158222	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_001207000|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr1_-_3447974_3448011	0.158196	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg19_v1_chr7_+_80267922_80267965	0.157782	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr11_-_62472901_62472984	0.157558	SOX2.p2	
hg19_v1_chr6_-_131291480_131291622	0.157226	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr13_+_53216564_53216567	0.157154	SOX2.p2	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2
hg19_v1_chr20_-_29993955_29994068	0.156768	SOX2.p2	HQ258031|DEFB121|245934|defensin, beta 121	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg19_v1_chr7_-_104909442_104909525	0.15671	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr17_-_76921076_76921155	0.156397	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr15_+_77287428_77287553	0.156087	SOX2.p2	AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr8_-_87520849_87520978	0.155947	SOX2.p2	BX640636|FAM82B|51115|family with sequence similarity 82, member B	AK303122|FAM82B|51115|family with sequence similarity 82, member B	BC009671|FAM82B|51115|family with sequence similarity 82, member B	AK297896|FAM82B|51115|family with sequence similarity 82, member B	AF151848|FAM82B|51115|family with sequence similarity 82, member B	AK000672|FAM82B|51115|family with sequence similarity 82, member B
hg19_v1_chrX_+_71364033_71364033	0.155598	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg19_v1_chr10_-_735522_735861	0.155323	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v1_chr9_-_21228132_21228313	0.154587	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg19_v1_chr3_-_112359962_112359992	0.154584	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr3_-_114866090_114866139	0.15407	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr8_+_21777216_21777281	0.153965	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr20_+_37209837_37209843	0.153904	SOX2.p2	BC029594|ADIG|149685|adipogenin	NM_001018082|ADIG|149685|adipogenin	BC119704|ADIG|149685|adipogenin	BC119705|ADIG|149685|adipogenin
hg19_v1_chr19_-_12780448_12780464	0.153902	SOX2.p2	AF078861|WDR83OS|51398|WD repeat domain 83 opposite strand	AF151898|WDR83OS|51398|WD repeat domain 83 opposite strand	NM_016145|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr20_-_1472004_1472067	0.153736	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr15_-_28567249_28567294	0.153694	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2
hg19_v1_chr7_-_27142301_27142393	0.15361	SOX2.p2	AK096742|HOXA2|3199|homeobox A2	NM_006735|HOXA2|3199|homeobox A2
hg19_v1_chr16_+_10479911_10479924	0.153269	SOX2.p2	AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg19_v1_chr7_+_142560512_142560518	0.153022	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg19_v1_chr11_-_61129273_61129324	0.152575	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr11_+_36616039_36616170	0.152203	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg19_v1_chr11_+_66278076_66278157	0.152146	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg19_v1_chr20_+_57470200_57470251	0.151769	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg19_v1_chrX_-_138914384_138914446	0.151511	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg19_v1_chr10_+_45496272_45496382	0.150822	SOX2.p2	NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)
hg19_v1_chr7_+_20370724_20370745	0.150815	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg19_v1_chr6_+_32939974_32940002	0.150767	SOX2.p2	BC007715|BRD2|6046|bromodomain containing 2	BC001885|BRD2|6046|bromodomain containing 2	BC000477|BRD2|6046|bromodomain containing 2
hg19_v1_chr14_-_22005035_22005336	0.150208	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr17_-_39156106_39156145	0.150158	SOX2.p2	DQ892403|KRTAP3-2|83897|keratin associated protein 3-2	DQ895615|KRTAP3-2|83897|keratin associated protein 3-2	AJ406932|KRTAP3-2|83897|keratin associated protein 3-2	NM_031959|KRTAP3-2|83897|keratin associated protein 3-2	BC034582|KRTAP3-2|83897|keratin associated protein 3-2
hg19_v1_chrX_+_153030956_153030966	0.149911	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg19_v1_chr11_-_18548363_18548502	0.149401	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg19_v1_chr2_-_32264819_32264918	0.149308	SOX2.p2	AF226998|DPY30|84661|dpy-30 homolog (C. elegans)	NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)	BC015970|DPY30|84661|dpy-30 homolog (C. elegans)
hg19_v1_chr19_-_14629235_14629346	0.149053	SOX2.p2	
hg19_v1_chrY_+_20137666_20137693	0.148611	SOX2.p2	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr16_+_69680959_69681070	0.148572	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v1_chr15_+_63796793_63796962	0.148527	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg19_v1_chr11_-_5706186_5706341	0.148102	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr1_-_45140117_45140179	0.148089	SOX2.p2	AK296548|TMEM53|79639|transmembrane protein 53	BC007521|TMEM53|79639|transmembrane protein 53
hg19_v1_chrX_-_15288588_15288588	0.148049	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg19_v1_chr5_+_140220811_140220906	0.147801	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg19_v1_chr19_+_41771013_41771069	0.147779	SOX2.p2	AK297127|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr8_-_145027975_145028087	0.147773	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg19_v1_chr6_-_79787784_79787854	0.147642	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr2_+_210444154_210444187	0.147118	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr10_-_105110890_105110897	0.146888	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr5_+_36876899_36877242	0.146666	SOX2.p2	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)	BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)	BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)	AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)
hg19_v1_chr1_+_245133067_245133170	0.146367	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg19_v1_chr15_-_45493372_45493372	0.145689	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg19_v1_chr17_-_16097882_16097955	0.145215	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg19_v1_chr3_+_98250742_98250877	0.145056	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg19_v1_chr2_+_169312793_169312958	0.144984	SOX2.p2	NM_203463|CERS6|253782|ceramide synthase 6	BC109284|CERS6|253782|ceramide synthase 6	BC109285|CERS6|253782|ceramide synthase 6
hg19_v1_chr3_-_47823337_47823342	0.144972	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr12_-_25055228_25055321	0.144725	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr4_-_17806820_17806917	0.14464	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg19_v1_chr16_-_10788729_10788801	0.144587	SOX2.p2	HQ258441|TEKT5|146279|tektin 5	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg19_v1_chr17_+_58499854_58499905	0.144542	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg19_v1_chr5_-_74062885_74063041	0.144414	SOX2.p2	AK307839|GFM2|84340|G elongation factor, mitochondrial 2	BC015712|GFM2|84340|G elongation factor, mitochondrial 2	AY453587|GFM2|84340|G elongation factor, mitochondrial 2	BC030612|GFM2|84340|G elongation factor, mitochondrial 2	AK308422|GFM2|84340|G elongation factor, mitochondrial 2	AF111808|GFM2|84340|G elongation factor, mitochondrial 2	AK025314|GFM2|84340|G elongation factor, mitochondrial 2	AK315705|GFM2|84340|G elongation factor, mitochondrial 2	AF367997|GFM2|84340|G elongation factor, mitochondrial 2	NM_032380|GFM2|84340|G elongation factor, mitochondrial 2	NM_170681|GFM2|84340|G elongation factor, mitochondrial 2	NM_170691|GFM2|84340|G elongation factor, mitochondrial 2
hg19_v1_chr4_+_156680125_156680283	0.144297	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr6_-_52860076_52860179	0.144255	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg19_v1_chrX_+_100805415_100805588	0.144144	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr8_-_101315457_101315486	0.144024	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr2_+_48757063_48757180	0.143999	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg19_v1_chr13_-_45150391_45150470	0.143829	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr9_+_103204187_103204220	0.143816	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr1_+_40915773_40915827	0.143667	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg19_v1_chr12_+_75784878_75784893	0.142766	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr4_+_184580483_184580539	0.142661	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr20_-_1472168_1472232	0.142544	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr9_+_116342939_116342939	0.142338	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr20_-_40246991_40247132	0.142318	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg19_v1_chr14_-_50697940_50698026	0.142194	SOX2.p2	L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)	HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg19_v1_chrX_+_12993224_12993256	0.142189	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr2_+_11295539_11295564	0.142061	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg19_v1_chr5_+_140165875_140165875	0.141592	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr13_+_37393306_37393493	0.141479	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg19_v1_chr17_+_18768781_18768861	0.141219	SOX2.p2	NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v1_chr20_-_20036685_20036689	0.141138	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg19_v1_chr22_-_36903086_36903149	0.141038	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg19_v1_chr16_-_1832576_1832608	0.141035	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr1_+_90460650_90460783	0.140824	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg19_v1_chrX_+_69353764_69353797	0.140714	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg19_v1_chr18_-_44497307_44497520	0.140574	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr14_+_58906398_58906455	0.140562	SOX2.p2	AK302579|KIAA0586|9786|KIAA0586	NM_001244193|KIAA0586|9786|KIAA0586	AK310356|KIAA0586|9786|KIAA0586	AK302718|KIAA0586|9786|KIAA0586
hg19_v1_chr17_+_30814552_30814643	0.140521	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr1_+_78444922_78445023	0.140266	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v1_chr10_+_97515408_97515672	0.139769	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr9_+_2622134_2622188	0.139651	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr14_+_69658482_69658551	0.139641	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr10_+_88985204_88985256	0.139546	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001099338|FAM22A|728118|family with sequence similarity 22, member A	AB095940|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr12_-_91452130_91452130	0.139545	SOX2.p2	NM_007035|KERA|11081|keratocan
hg19_v1_chr20_-_44718564_44718658	0.139138	SOX2.p2	NM_020967|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr4_-_69111333_69111411	0.139132	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg19_v1_chr21_+_35014624_35015086	0.139029	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr10_-_98119058_98119091	0.138688	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg19_v1_chr3_+_122044010_122044139	0.138646	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg19_v1_chr12_-_71148063_71148236	0.138467	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr22_+_40573879_40574120	0.138391	SOX2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg19_v1_chr20_-_50384861_50384895	0.138355	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr20_+_31367637_31367657	0.138225	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr3_+_25469749_25469769	0.13812	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr20_-_50384899_50384957	0.137075	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr14_-_38725539_38725573	0.13705	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg19_v1_chr5_+_86564146_86564164	0.137047	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr9_-_97402556_97402569	0.136703	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg19_v1_chr5_+_140186658_140186772	0.13595	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4	HQ258500|PCDHA4|56144|protocadherin alpha 4
hg19_v1_chrX_+_123095598_123095677	0.135873	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg19_v1_chr1_-_70671160_70671261	0.135612	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg19_v1_chr8_-_121824287_121824726	0.135478	SOX2.p2	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v1_chr4_-_87281374_87281374	0.135442	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr8_+_70405027_70405051	0.135413	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg19_v1_chr4_-_156787377_156787424	0.135267	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg19_v1_chr1_-_54871681_54871895	0.135118	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg19_v1_chr12_+_69979268_69979286	0.135097	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr11_+_17332454_17332513	0.135058	SOX2.p2	
hg19_v1_chr20_-_62462568_62462626	0.134684	SOX2.p2	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46	BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46
hg19_v1_chr16_-_30798206_30798588	0.13461	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg19_v1_chr5_+_102201526_102201535	0.13459	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg19_v1_chr7_+_94292737_94292755	0.134466	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chr17_-_76921205_76921452	0.134286	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chrX_+_12994286_12994400	0.134143	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr13_-_21635629_21635702	0.134109	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr1_-_235490801_235490801	0.13408	SOX2.p2	AB210032|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_001206794|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr9_+_2622099_2622126	0.13384	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr3_-_156878481_156878548	0.13384	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg19_v1_chr5_+_140501399_140501421	0.133755	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr9_+_84543342_84543401	0.132297	SOX2.p2	NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4	AK125847|FAM75D4|389761|family with sequence similarity 75, member D4	AK308327|FAM75D4|389761|family with sequence similarity 75, member D4
hg19_v1_chrX_+_44703248_44703378	0.132099	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg19_v1_chr1_+_209602164_209602167	0.132057	SOX2.p2	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)
hg19_v1_chr10_-_50732142_50732358	0.131931	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg19_v1_chr11_-_10715297_10715321	0.131869	SOX2.p2	AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr10_-_33224485_33224485	0.13181	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr12_-_11002051_11002074	0.131649	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_001098538|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg19_v1_chrX_-_40036581_40036581	0.131559	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg19_v1_chr15_-_74494851_74494866	0.131552	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr4_-_189026401_189026407	0.13145	SOX2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg19_v1_chr1_+_12185955_12186077	0.131245	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg19_v1_chrX_+_152954965_152954965	0.130997	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg19_v1_chr3_+_186435097_186435330	0.13099	SOX2.p2	NM_000893|KNG1|3827|kininogen 1	NM_001102416|KNG1|3827|kininogen 1	NM_001166451|KNG1|3827|kininogen 1	AK303768|KNG1|3827|kininogen 1	AK298440|KNG1|3827|kininogen 1	AK315230|KNG1|3827|kininogen 1	AK290839|KNG1|3827|kininogen 1	BC060039|KNG1|3827|kininogen 1	K02566|KNG1|3827|kininogen 1	BC026253|KNG1|3827|kininogen 1
hg19_v1_chr22_+_31090792_31090898	0.130765	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg19_v1_chr17_-_3182267_3182267	0.130663	SOX2.p2	BC095517|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2	NM_002551|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2
hg19_v1_chr4_-_83350452_83350547	0.130593	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr8_+_39771327_39771441	0.130538	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1	JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg19_v1_chr3_-_48470715_48471045	0.129997	SOX2.p2	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg19_v1_chr13_-_60587298_60587342	0.129968	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg19_v1_chr7_-_148580600_148580626	0.12932	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr13_-_41593491_41593507	0.129197	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr9_-_127269689_127269719	0.128992	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg19_v1_chr11_+_92085261_92085261	0.128968	SOX2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr10_+_24755440_24755448	0.128964	SOX2.p2	AK300422|KIAA1217|56243|KIAA1217
hg19_v1_chrX_-_100914816_100914862	0.128844	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr9_+_116343169_116343207	0.128694	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr12_+_69979202_69979247	0.128454	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr1_-_50889102_50889121	0.128356	SOX2.p2	NM_032110|DMRTA2|63950|DMRT-like family A2
hg19_v1_chr19_+_7660698_7660944	0.128251	SOX2.p2	BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3
hg19_v1_chr11_+_33279859_33279879	0.128193	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr18_-_45663667_45663731	0.128059	SOX2.p2	AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C	NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C	EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C
hg19_v1_chr11_-_8190535_8190592	0.127903	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg19_v1_chr4_+_106629905_106630041	0.127695	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr5_+_138089118_138089145	0.127645	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr8_+_87111132_87111157	0.12748	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v1_chr12_-_102591547_102591613	0.127413	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg19_v1_chr8_-_17942304_17942352	0.127177	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr2_+_1417232_1417278	0.127174	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_001206744|TPO|7173|thyroid peroxidase	NM_001206745|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg19_v1_chr11_-_82782883_82782912	0.127163	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr5_+_53813494_53813596	0.127143	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg19_v1_chr18_+_56530060_56530179	0.127052	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chr12_-_57704245_57704245	0.126912	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg19_v1_chr10_-_105110823_105110842	0.126867	SOX2.p2	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr2_+_11295569_11295593	0.12679	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg19_v1_chr1_+_6684924_6684924	0.126613	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chrX_+_100354797_100354797	0.12626	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr21_+_34922923_34923018	0.126194	SOX2.p2	BC002422|SON|6651|SON DNA binding protein
hg19_v1_chr16_-_71610948_71610997	0.126053	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg19_v1_chr14_-_45603658_45603667	0.125996	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chr2_-_10952855_10952986	0.125899	SOX2.p2	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg19_v1_chr7_-_14029641_14029641	0.125817	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr8_+_29952971_29953028	0.125712	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr11_-_3013522_3013529	0.125638	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr5_+_140474198_140474414	0.125595	SOX2.p2	AK027526|PCDHB2|56133|protocadherin beta 2	BC098575|PCDHB2|56133|protocadherin beta 2	NM_018936|PCDHB2|56133|protocadherin beta 2	AK314642|PCDHB2|56133|protocadherin beta 2	BC098347|PCDHB2|56133|protocadherin beta 2	AF152495|PCDHB2|56133|protocadherin beta 2	AF217756|PCDHB2|56133|protocadherin beta 2	AB209745|PCDHB2|56133|protocadherin beta 2
hg19_v1_chr2_+_102927961_102928022	0.125362	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg19_v1_chr8_-_38325825_38326072	0.125184	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr6_+_25279765_25280023	0.125165	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr13_-_107220444_107220527	0.124983	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg19_v1_chr22_+_38092994_38093010	0.124892	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg19_v1_chr1_+_24286311_24286382	0.124506	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr17_-_27467395_27467428	0.124486	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg19_v1_chr2_-_128568666_128568741	0.124464	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg19_v1_chr3_+_9476506_9476527	0.124423	SOX2.p2	
hg19_v1_chr10_+_52750904_52750911	0.124386	SOX2.p2	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chr7_+_22767101_22767136	0.124248	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr12_-_8693391_8693558	0.124203	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg19_v1_chr3_+_172472246_172472359	0.124116	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr13_-_45150601_45150700	0.123771	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr10_-_69752385_69752431	0.123674	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr6_+_44187241_44187471	0.123648	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr11_-_62475060_62475178	0.123605	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr5_-_134734915_134734927	0.123479	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr1_-_242162364_242162384	0.123433	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg19_v1_chr4_+_2820540_2820540	0.123394	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr2_+_68592317_68592427	0.122913	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg19_v1_chr17_+_58677603_58677775	0.122774	SOX2.p2	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v1_chr1_-_115269672_115269687	0.122735	SOX2.p2	AK130392|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr5_+_176875325_176875334	0.122604	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg19_v1_chr14_+_21152735_21152817	0.122466	SOX2.p2	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr14_-_23446431_23446431	0.122103	SOX2.p2	AK096128|AJUBA|84962|ajuba LIM protein	NM_198086|AJUBA|84962|ajuba LIM protein
hg19_v1_chr12_-_10573041_10573193	0.122007	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg19_v1_chr14_-_50999178_50999442	0.121942	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v1_chr12_-_102455793_102455930	0.121911	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr3_+_44690216_44690276	0.121891	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg19_v1_chr11_+_118215058_118215111	0.121846	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg19_v1_chr11_+_130184326_130184418	0.121795	SOX2.p2	AK091840|FLJ34521|646383|uncharacterized LOC646383
hg19_v1_chr2_-_136288768_136288805	0.121573	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg19_v1_chr22_+_29999649_30000080	0.121512	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg19_v1_chr19_+_20011700_20011869	0.12148	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chrX_-_73834427_73834429	0.121435	SOX2.p2	
hg19_v1_chr10_+_180404_180423	0.12143	SOX2.p2	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr9_-_107690336_107690433	0.121403	SOX2.p2	BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr1_+_100315806_100316044	0.121251	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr1_-_21501229_21501250	0.12112	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr20_-_34195409_34195436	0.12102	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg19_v1_chr10_+_118350470_118350641	0.120923	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg19_v1_chr22_-_27013959_27014007	0.120878	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg19_v1_chr6_+_29364331_29364476	0.120858	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg19_v1_chr6_+_28092386_28092412	0.120589	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg19_v1_chr10_-_49482912_49482940	0.120552	SOX2.p2	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2	NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2
hg19_v1_chr1_-_204165542_204165620	0.119959	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor
hg19_v1_chr15_-_31947541_31947541	0.119896	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr11_+_33279167_33279404	0.119449	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr15_+_57210823_57210832	0.119245	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg19_v1_chr12_+_120907599_120907691	0.118937	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr9_+_131644427_131644478	0.11879	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr15_-_70390229_70390258	0.118568	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr4_-_7941092_7941684	0.118011	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg19_v1_chr13_+_48877775_48877885	0.117987	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg19_v1_chr10_+_99079017_99079097	0.11798	SOX2.p2	NM_005479|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AK307245|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	U58975|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	BC034476|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AB074890|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas
hg19_v1_chr13_+_48877900_48877943	0.117819	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg19_v1_chr17_+_76210329_76210465	0.117688	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	HM625836|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg19_v1_chr1_-_33813261_33813332	0.117663	SOX2.p2	
hg19_v1_chr10_-_33623978_33624019	0.117466	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg19_v1_chrX_-_117250624_117250827	0.117087	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr11_+_5509914_5509914	0.116863	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg19_v1_chr7_+_23145916_23145916	0.116746	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chr8_+_29952921_29952965	0.116621	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr8_+_26240522_26240646	0.116367	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v1_chr11_+_63137260_63137528	0.116316	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg19_v1_chr5_-_133747520_133747589	0.116265	SOX2.p2	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg19_v1_chr15_+_96875793_96875793	0.116015	SOX2.p2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr13_+_97794050_97794115	0.115782	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr2_+_204571197_204571363	0.11575	SOX2.p2	NM_001243077|CD28|940|CD28 molecule	NM_001243078|CD28|940|CD28 molecule	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg19_v1_chr2_+_31456879_31456964	0.115684	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr7_+_23636970_23637060	0.115636	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg19_v1_chr15_+_99191671_99192272	0.115391	SOX2.p2	AB425196|IGF1R|3480|insulin-like growth factor 1 receptor
hg19_v1_chr18_+_72201799_72201902	0.115299	SOX2.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	HQ258259|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chr1_+_39547088_39547088	0.115201	SOX2.p2	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1	NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1
hg19_v1_chr7_+_72300044_72300155	0.11512	SOX2.p2	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg19_v1_chr16_+_55600583_55600667	0.115096	SOX2.p2	BC006000|CAPNS2|84290|calpain, small subunit 2	NM_032330|CAPNS2|84290|calpain, small subunit 2	BC005397|CAPNS2|84290|calpain, small subunit 2	AY052551|CAPNS2|84290|calpain, small subunit 2	EU832656|CAPNS2|84290|calpain, small subunit 2
hg19_v1_chr15_+_80390757_80390757	0.115083	SOX2.p2	NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chrX_+_106143393_106143393	0.114936	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg19_v1_chr17_+_38474513_38474536	0.114849	SOX2.p2	AK292205|RARA|5914|retinoic acid receptor, alpha	FJ487576|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr6_+_32940860_32940860	0.114585	SOX2.p2	BX647233|BRD2|6046|bromodomain containing 2	NM_001199456|BRD2|6046|bromodomain containing 2
hg19_v1_chr7_-_50518021_50518087	0.114504	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg19_v1_chr5_+_140771482_140771482	0.114476	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr12_-_102455763_102455791	0.114432	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr3_-_47823343_47823358	0.114272	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr2_+_160569027_160569054	0.114183	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr7_+_94292816_94292946	0.114154	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr6_+_13924676_13924676	0.113979	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg19_v1_chr10_-_30316338_30316525	0.113776	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg19_v1_chr2_-_56151273_56151297	0.113725	SOX2.p2	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg19_v1_chr11_-_70672644_70672714	0.113628	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg19_v1_chr1_-_115259381_115259388	0.113568	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr1_+_24286300_24286310	0.113075	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr7_+_2671582_2671624	0.113014	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr5_+_121647385_121647440	0.112903	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr16_+_24551672_24552056	0.112806	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr5_+_92918924_92919042	0.112447	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr8_-_102803438_102803438	0.112147	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chr20_+_17207669_17207674	0.112115	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr14_+_59951141_59951314	0.112099	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg19_v1_chr14_-_60097223_60097308	0.112031	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chr17_-_76921453_76921501	0.111511	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr5_-_179051586_179051669	0.111463	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr14_+_70918873_70918873	0.111076	SOX2.p2	NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21
hg19_v1_chr13_-_21635703_21635729	0.110866	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr15_+_43663350_43663552	0.110803	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg19_v1_chr6_-_108582124_108582163	0.110794	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chr2_-_211018294_211018388	0.110697	SOX2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chrX_+_16668280_16668314	0.110594	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg19_v1_chr14_+_69658215_69658290	0.110589	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr18_+_3451589_3451674	0.11057	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr12_-_50790391_50790404	0.110528	SOX2.p2	BC054024|FAM186A|121006|family with sequence similarity 186, member A	AL833333|FAM186A|121006|family with sequence similarity 186, member A	NM_001145475|FAM186A|121006|family with sequence similarity 186, member A
hg19_v1_chr5_+_170846659_170846666	0.110137	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr17_+_4613931_4614025	0.109712	SOX2.p2	BC007427|ARRB2|409|arrestin, beta 2	BC067368|ARRB2|409|arrestin, beta 2	AF106941|ARRB2|409|arrestin, beta 2	CR749218|ARRB2|409|arrestin, beta 2	AB209786|ARRB2|409|arrestin, beta 2	AK290951|ARRB2|409|arrestin, beta 2	AK297181|ARRB2|409|arrestin, beta 2	BC095450|ARRB2|409|arrestin, beta 2	DQ893226|ARRB2|409|arrestin, beta 2	DQ896556|ARRB2|409|arrestin, beta 2	EU176778|ARRB2|409|arrestin, beta 2	CR450310|ARRB2|409|arrestin, beta 2	DQ664180|ARRB2|409|arrestin, beta 2	EU883572|ARRB2|409|arrestin, beta 2	Z11501|ARRB2|409|arrestin, beta 2	BC039066|ARRB2|409|arrestin, beta 2
hg19_v1_chr3_-_47823377_47823378	0.109596	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr2_+_153191591_153191750	0.109471	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg19_v1_chr19_+_55888203_55888203	0.109467	SOX2.p2	AF442729|TMEM190|147744|transmembrane protein 190	BC128189|TMEM190|147744|transmembrane protein 190	BC128190|TMEM190|147744|transmembrane protein 190	NM_139172|TMEM190|147744|transmembrane protein 190
hg19_v1_chr3_-_183735617_183735765	0.109412	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr10_+_89117424_89117476	0.10919	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001009610|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr20_+_30795698_30795698	0.109171	SOX2.p2	D80002|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr4_-_2263808_2263839	0.109088	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr16_+_68344868_68345050	0.108902	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg19_v1_chr16_-_8962842_8962878	0.108604	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg19_v1_chr11_-_3013550_3013560	0.108283	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr11_+_112047088_112047122	0.108208	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg19_v1_chr11_+_71791376_71791376	0.108008	SOX2.p2	NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing
hg19_v1_chr3_+_178866124_178866352	0.107974	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr5_-_147211141_147211199	0.107619	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg19_v1_chr8_+_64081187_64081213	0.107472	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr5_+_132209354_132209359	0.107388	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg19_v1_chr1_-_213020947_213020990	0.107101	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg19_v1_chr7_-_8302141_8302205	0.107085	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr1_-_1623942_1623988	0.107079	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg19_v1_chr4_+_71768056_71768171	0.106864	SOX2.p2	NM_001244766|MOB1B|92597|MOB kinase activator 1B	NM_001244767|MOB1B|92597|MOB kinase activator 1B	NM_173468|MOB1B|92597|MOB kinase activator 1B	AK093545|MOB1B|92597|MOB kinase activator 1B	AK299481|MOB1B|92597|MOB kinase activator 1B	BC038112|MOB1B|92597|MOB kinase activator 1B	AK313513|MOB1B|92597|MOB kinase activator 1B
hg19_v1_chr1_+_10509775_10509775	0.106857	SOX2.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chr4_+_106473776_106473788	0.106756	SOX2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg19_v1_chr8_+_80523304_80523313	0.10671	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg19_v1_chrX_+_123095555_123095591	0.106672	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg19_v1_chr19_+_18530087_18530167	0.10667	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4
hg19_v1_chr2_-_170218972_170218991	0.106531	SOX2.p2	AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2	AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2
hg19_v1_chr10_-_123687936_123688064	0.10651	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg19_v1_chr20_+_30795699_30795763	0.106275	SOX2.p2	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr15_+_65914269_65914269	0.105902	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg19_v1_chr16_+_21611132_21611177	0.105828	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg19_v1_chr1_+_203764802_203764807	0.10578	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr14_-_23451704_23451847	0.105688	SOX2.p2	BC034968|AJUBA|84962|ajuba LIM protein	NM_032876|AJUBA|84962|ajuba LIM protein
hg19_v1_chr6_-_108582167_108582221	0.105664	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr7_-_23571443_23571685	0.105554	SOX2.p2	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)
hg19_v1_chr16_+_4845265_4845378	0.10555	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chrX_-_31526414_31526414	0.104945	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg19_v1_chr6_-_108279212_108279302	0.104902	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr15_-_59225800_59225863	0.104724	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr6_-_83775453_83775597	0.104576	SOX2.p2	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg19_v1_chr20_-_50179338_50179431	0.104557	SOX2.p2	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v1_chr22_+_44576769_44576856	0.104379	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg19_v1_chr6_+_39760772_39760865	0.104376	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg19_v1_chr8_-_87520981_87521011	0.103928	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg19_v1_chr5_+_140552201_140552416	0.103822	SOX2.p2	AK315054|PCDHB7|56129|protocadherin beta 7	AK222560|PCDHB7|56129|protocadherin beta 7	AK024641|PCDHB7|56129|protocadherin beta 7	NM_018940|PCDHB7|56129|protocadherin beta 7	AK222678|PCDHB7|56129|protocadherin beta 7	BC098574|PCDHB7|56129|protocadherin beta 7	BC130331|PCDHB7|56129|protocadherin beta 7	BC130333|PCDHB7|56129|protocadherin beta 7	AF152500|PCDHB7|56129|protocadherin beta 7	AF217750|PCDHB7|56129|protocadherin beta 7	HQ258360|PCDHB7|56129|protocadherin beta 7
hg19_v1_chrX_+_128674181_128674416	0.103412	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr14_+_50234783_50234891	0.103375	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr14_+_32183774_32183774	0.10322	SOX2.p2	AK093789|NUBPL|80224|nucleotide binding protein-like	NM_001201574|NUBPL|80224|nucleotide binding protein-like
hg19_v1_chr3_-_47823368_47823372	0.103093	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr5_+_140787769_140787769	0.102891	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg19_v1_chr3_-_160283166_160283219	0.102857	SOX2.p2	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr12_-_92539614_92539672	0.102621	SOX2.p2	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg19_v1_chrX_-_24665454_24665465	0.102513	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chrX_+_135579237_135579398	0.102501	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr21_-_27107959_27107983	0.10238	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v1_chr22_+_44568835_44568878	0.102283	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg19_v1_chr2_-_142889269_142889269	0.102262	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr6_+_148663728_148663798	0.101922	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr1_+_45792544_45792576	0.101829	SOX2.p2	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg19_v1_chr15_+_84115979_84116141	0.101618	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr7_-_37488408_37488529	0.101303	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr16_+_27078218_27078277	0.101256	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg19_v1_chr7_+_142960502_142960586	0.101199	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr17_+_2240795_2241009	0.101187	SOX2.p2	NM_014853|SGSM2|9905|small G protein signaling modulator 2	AB007857|SGSM2|9905|small G protein signaling modulator 2	NM_001098509|SGSM2|9905|small G protein signaling modulator 2	BC039204|SGSM2|9905|small G protein signaling modulator 2	AK294955|SGSM2|9905|small G protein signaling modulator 2	AB275762|SGSM2|9905|small G protein signaling modulator 2	AB449878|SGSM2|9905|small G protein signaling modulator 2	AK304263|SGSM2|9905|small G protein signaling modulator 2
hg19_v1_chr14_-_35344450_35344488	0.101183	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr6_-_150057659_150057707	0.101115	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg19_v1_chr16_-_15736964_15737022	0.100838	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg19_v1_chr7_-_83270746_83270746	0.100833	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr1_-_115259433_115259514	0.100682	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr2_+_90077732_90077776	0.100647	SOX2.p2	
hg19_v1_chr8_+_17780492_17780499	0.100483	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg19_v1_chr7_+_73245192_73245350	0.100463	SOX2.p2	NM_001305|CLDN4|1364|claudin 4	AK026651|CLDN4|1364|claudin 4	AK124076|CLDN4|1364|claudin 4	BC000671|CLDN4|1364|claudin 4	AB000712|CLDN4|1364|claudin 4
hg19_v1_chr3_+_129158949_129159071	0.100341	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr14_-_54955714_54955796	0.100224	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr2_+_8822112_8822294	0.100219	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v1_chr1_-_216978708_216978708	0.100091	SOX2.p2	AY388461|ESRRG|2104|estrogen-related receptor gamma	NM_001243514|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr9_+_116356199_116356222	0.0997818	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr16_-_23521794_23521801	0.099753	SOX2.p2	BC000284|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	AK308425|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr15_-_59225766_59225798	0.0996879	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr11_-_5537815_5537955	0.099683	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg19_v1_chr16_+_67927170_67927275	0.09964	SOX2.p2	AK309272|PSKH1|5681|protein serine kinase H1	NM_006742|PSKH1|5681|protein serine kinase H1	BC062616|PSKH1|5681|protein serine kinase H1	AJ272212|PSKH1|5681|protein serine kinase H1
hg19_v1_chr12_-_51477138_51477234	0.0995561	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr6_+_25279651_25279666	0.0993512	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr3_-_139258477_139258489	0.0993172	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr8_+_79578258_79578383	0.0990083	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg19_v1_chr19_-_6279927_6280004	0.0988512	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v1_chr5_-_137090049_137090095	0.098401	SOX2.p2	
hg19_v1_chr20_-_44718517_44718531	0.0983686	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr14_+_60712469_60712474	0.09834	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v1_chr5_-_147211235_147211259	0.0982081	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg19_v1_chr1_-_31538762_31538804	0.0981222	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr9_+_125795787_125795948	0.0978689	SOX2.p2	AK294531|RABGAP1|23637|RAB GTPase activating protein 1	AK299686|GPR21|2844|G protein-coupled receptor 21	AK313539|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr5_+_140797243_140797259	0.0978624	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr2_+_48844936_48845014	0.097851	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg19_v1_chr1_-_45140062_45140113	0.0978041	SOX2.p2	CR457348|TMEM53|79639|transmembrane protein 53	AK026006|TMEM53|79639|transmembrane protein 53	AK225405|TMEM53|79639|transmembrane protein 53	BC064520|TMEM53|79639|transmembrane protein 53	NM_024587|TMEM53|79639|transmembrane protein 53	AL832539|TMEM53|79639|transmembrane protein 53
hg19_v1_chr1_-_153013593_153013594	0.0976512	SOX2.p2	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg19_v1_chr7_-_44887567_44887589	0.0975989	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg19_v1_chr14_-_88792923_88793084	0.0974501	SOX2.p2	AK315263|KCNK10|54207|potassium channel, subfamily K, member 10	EU978938|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr5_+_140809957_140810084	0.0974184	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr10_+_17270469_17270604	0.097358	SOX2.p2	BC066956|VIM|7431|vimentin
hg19_v1_chr6_-_29323971_29324053	0.0971652	SOX2.p2	BC069149|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	AJ459859|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	NM_030876|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1
hg19_v1_chr1_-_17765052_17765071	0.0971109	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr2_+_219264477_219264603	0.0971003	SOX2.p2	AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg19_v1_chr7_+_56119439_56119461	0.0967589	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr5_-_78281688_78281765	0.0967366	SOX2.p2	BC029051|ARSB|411|arylsulfatase B	NM_198709|ARSB|411|arylsulfatase B
hg19_v1_chr3_+_183873309_183873421	0.0966004	SOX2.p2	BC032459|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	AF006013|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	DQ891616|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	DQ894808|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)
hg19_v1_chr6_+_26251826_26251878	0.0964715	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr6_-_108582225_108582252	0.0964668	SOX2.p2	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg19_v1_chr12_+_122652265_122652265	0.0962804	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg19_v1_chr7_-_37393271_37393271	0.0962117	SOX2.p2	AK291784|ELMO1|9844|engulfment and cell motility 1	NM_001206482|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr9_-_19033183_19033255	0.0961264	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg19_v1_chr3_-_124842442_124842468	0.0960466	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr7_-_27159213_27159213	0.0960431	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg19_v1_chr2_+_61293038_61293118	0.0959594	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg19_v1_chr7_+_23286386_23286387	0.0958593	SOX2.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr14_+_69658193_69658214	0.0956148	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr3_-_93782066_93782066	0.0954424	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr2_-_190648996_190649072	0.0954364	SOX2.p2	AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg19_v1_chr1_+_203096835_203096860	0.0953133	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg19_v1_chr5_+_138089073_138089116	0.0952993	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr8_+_81398416_81398552	0.09526	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg19_v1_chr12_-_8815370_8815432	0.0952253	SOX2.p2	U37283|MFAP5|8076|microfibrillar associated protein 5	NM_003480|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr10_+_127408225_127408399	0.0951213	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr3_+_184033936_184033978	0.0948339	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr3_-_101231973_101232084	0.0947467	SOX2.p2	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg19_v1_chr13_-_22033310_22033470	0.0947245	SOX2.p2	BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20	BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20
hg19_v1_chr5_+_85913762_85913872	0.094635	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr6_+_18387580_18387755	0.0940956	SOX2.p2	AK096832|RNF144B|255488|ring finger protein 144B	NM_182757|RNF144B|255488|ring finger protein 144B	AB076367|RNF144B|255488|ring finger protein 144B	BC063311|RNF144B|255488|ring finger protein 144B	AL832329|RNF144B|255488|ring finger protein 144B
hg19_v1_chr7_+_129007942_129008030	0.0940399	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr14_+_76071804_76071804	0.093998	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg19_v1_chr7_+_116502597_116502668	0.0938591	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr9_+_2717525_2717525	0.0937009	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg19_v1_chr3_+_184038050_184038206	0.0935993	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr19_+_41699140_41699186	0.0933069	SOX2.p2	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr10_-_99052358_99052390	0.0932701	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr12_+_98909405_98909409	0.0930581	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr3_-_149086884_149086954	0.0930416	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr20_+_30795574_30795696	0.0930271	SOX2.p2	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr12_+_70759974_70760559	0.0927885	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr4_-_54930466_54930587	0.09246	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr3_+_138066489_138066538	0.0922209	SOX2.p2	NM_001252091|MRAS|22808|muscle RAS oncogene homolog	NM_012219|MRAS|22808|muscle RAS oncogene homolog	AK124954|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr1_+_181003066_181003137	0.0921845	SOX2.p2	AK304645|MR1|3140|major histocompatibility complex, class I-related	AK290374|MR1|3140|major histocompatibility complex, class I-related	AK222910|MR1|3140|major histocompatibility complex, class I-related
hg19_v1_chr6_+_148663953_148664027	0.0919034	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr2_+_79347610_79347631	0.0918015	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg19_v1_chr12_+_49212253_49212314	0.0915567	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg19_v1_chr15_+_59908724_59908787	0.0914445	SOX2.p2	AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr20_+_31823801_31823824	0.0912381	SOX2.p2	AF417256|BPIFA1|51297|BPI fold containing family A, member 1	AF417257|BPIFA1|51297|BPI fold containing family A, member 1	BC012549|BPIFA1|51297|BPI fold containing family A, member 1	NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1	NM_016583|BPIFA1|51297|BPI fold containing family A, member 1	NM_130852|BPIFA1|51297|BPI fold containing family A, member 1	AK292778|BPIFA1|51297|BPI fold containing family A, member 1	AY359020|BPIFA1|51297|BPI fold containing family A, member 1	AB024937|BPIFA1|51297|BPI fold containing family A, member 1	AF158745|BPIFA1|51297|BPI fold containing family A, member 1	AF439448|BPIFA1|51297|BPI fold containing family A, member 1	AF172993|BPIFA1|51297|BPI fold containing family A, member 1
hg19_v1_chr7_-_44887663_44887675	0.0910423	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg19_v1_chr1_-_21113160_21113184	0.0909921	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chrY_-_6742028_6742067	0.0909712	SOX2.p2	BC074976|AMELY|266|amelogenin, Y-linked	BC074977|AMELY|266|amelogenin, Y-linked	BC069138|AMELY|266|amelogenin, Y-linked	M86933|AMELY|266|amelogenin, Y-linked	NM_001143|AMELY|266|amelogenin, Y-linked
hg19_v1_chr3_+_157827849_157827933	0.0908792	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr5_+_36608430_36608563	0.0908643	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr3_+_179322572_179322615	0.0908567	SOX2.p2	NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v1_chr1_+_153940345_153940403	0.090731	SOX2.p2	AK297703|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AY049977|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AK304665|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AB052778|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	NM_130898|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	BC038962|CREB3L4|148327|cAMP responsive element binding protein 3-like 4
hg19_v1_chr2_+_11680079_11680128	0.0906404	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr19_+_55141907_55142027	0.0902343	SOX2.p2	NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
hg19_v1_chr8_-_110620220_110620232	0.0900811	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr16_+_8806825_8806846	0.0900528	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr12_+_100661203_100661548	0.0900167	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg19_v1_chr9_-_98269480_98269480	0.0899686	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg19_v1_chr13_+_99058147_99058266	0.0899666	SOX2.p2	
hg19_v1_chr11_+_43665772_43665796	0.089923	SOX2.p2	
hg19_v1_chr16_-_51184507_51184507	0.0895984	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg19_v1_chr8_-_110693233_110693233	0.0894211	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr5_+_54398473_54398510	0.0891765	SOX2.p2	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg19_v1_chr17_-_63557764_63557772	0.0888906	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg19_v1_chr9_+_97521930_97522065	0.0887653	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr17_-_27402626_27402626	0.0887447	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg19_v1_chr15_+_48498497_48498498	0.0887445	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg19_v1_chr5_+_140514787_140515017	0.088603	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg19_v1_chr20_-_49547451_49547996	0.0885816	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg19_v1_chr17_+_68071386_68071475	0.0885022	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr16_+_57702156_57702259	0.0884836	SOX2.p2	AK172801|GPR97|222487|G protein-coupled receptor 97	NM_170776|GPR97|222487|G protein-coupled receptor 97	BC064508|GPR97|222487|G protein-coupled receptor 97	AB049169|GPR97|222487|G protein-coupled receptor 97	AK310124|GPR97|222487|G protein-coupled receptor 97	AK301258|GPR97|222487|G protein-coupled receptor 97	BC044222|GPR97|222487|G protein-coupled receptor 97	AY140959|GPR97|222487|G protein-coupled receptor 97
hg19_v1_chr2_-_166060552_166060603	0.088367	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr8_+_133879202_133879245	0.0882787	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg19_v1_chr16_-_11367451_11367451	0.0882187	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg19_v1_chr3_-_47823419_47823595	0.088027	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr21_-_34185943_34186052	0.0880143	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg19_v1_chr2_+_46926323_46926479	0.0879047	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr19_+_41869848_41869870	0.0878593	SOX2.p2	NM_001098825|TMEM91|641649|transmembrane protein 91
hg19_v1_chr4_-_55991746_55991763	0.0876027	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v1_chr17_-_4269814_4270002	0.087497	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr9_+_77112251_77112298	0.0872862	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr11_+_7041699_7041699	0.0866339	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg19_v1_chr7_+_73868111_73868218	0.0865063	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr12_-_90049818_90049884	0.0863079	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg19_v1_chr19_-_7698569_7698633	0.0861675	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg19_v1_chr22_+_38599026_38599026	0.0860196	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr3_+_135741576_135741660	0.0859925	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr9_+_131644368_131644398	0.0859227	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr16_-_71917411_71917443	0.0859186	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821	NM_001201553|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821
hg19_v1_chr5_+_85913755_85913761	0.0858047	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr11_-_2162340_2162583	0.0857418	SOX2.p2	NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg19_v1_chr14_-_58618916_58618932	0.0857287	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr5_-_22853435_22853458	0.0857152	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr18_+_657461_657632	0.085496	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr10_-_5045967_5046093	0.0853171	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr1_+_92495484_92495636	0.0852342	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg19_v1_chr5_+_140480056_140480233	0.0852279	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg19_v1_chr10_-_99052391_99052427	0.085159	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr10_+_70502251_70502305	0.0851245	SOX2.p2	AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg19_v1_chr2_-_27545901_27545984	0.085109	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg19_v1_chr3_+_138067969_138067969	0.0849743	SOX2.p2	NM_001252090|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr3_-_38992051_38992051	0.0849732	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v1_chr7_-_44887620_44887654	0.0849415	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg19_v1_chr1_+_161736033_161736107	0.0848947	SOX2.p2	NM_007348|ATF6|22926|activating transcription factor 6	AB015856|ATF6|22926|activating transcription factor 6
hg19_v1_chr5_-_134734796_134734833	0.0848819	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr2_+_74120132_74120143	0.0846266	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr19_+_58144510_58144621	0.084624	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg19_v1_chrX_-_133931146_133931261	0.0845914	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg19_v1_chr8_+_80523376_80523431	0.0844768	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg19_v1_chr3_-_112359277_112359287	0.0844648	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_-_30848805_30848928	0.0843229	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg19_v1_chr5_-_147162264_147162347	0.0842367	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr17_+_76000248_76000317	0.0839682	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg19_v1_chr17_+_4613780_4613928	0.0839433	SOX2.p2	NM_004313|ARRB2|409|arrestin, beta 2	NM_199004|ARRB2|409|arrestin, beta 2	AK297059|ARRB2|409|arrestin, beta 2	AK097542|ARRB2|409|arrestin, beta 2
hg19_v1_chr19_+_9296269_9296269	0.0838447	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg19_v1_chr17_+_34171647_34171928	0.0837887	SOX2.p2	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg19_v1_chr2_-_211035913_211036187	0.0837484	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chrX_-_106959597_106959710	0.0837076	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chrX_+_41306686_41306712	0.083583	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg19_v1_chr14_+_58894709_58894754	0.0835563	SOX2.p2	NM_014749|KIAA0586|9786|KIAA0586	BC066647|KIAA0586|9786|KIAA0586
hg19_v1_chr5_+_176562084_176562141	0.0834034	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr18_+_29027731_29027757	0.083239	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr1_+_100316530_100316598	0.0830846	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr22_+_30792929_30793101	0.083022	SOX2.p2	NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg19_v1_chr6_+_27777713_27777851	0.0828844	SOX2.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg19_v1_chr13_-_101327027_101327085	0.0828578	SOX2.p2	AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4
hg19_v1_chr7_-_44887697_44887756	0.0828445	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg19_v1_chr3_-_124930192_124930242	0.0826546	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr12_-_55028624_55028678	0.0825501	SOX2.p2	AF238867|LACRT|90070|lacritin	BC069317|LACRT|90070|lacritin	NM_033277|LACRT|90070|lacritin	BC062217|LACRT|90070|lacritin
hg19_v1_chr19_+_18530423_18530457	0.0824543	SOX2.p2	
hg19_v1_chrX_+_55246790_55246845	0.0822517	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg19_v1_chr7_+_55433396_55433748	0.0821492	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr1_+_15272414_15272414	0.0821483	SOX2.p2	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg19_v1_chr20_+_21283921_21284030	0.0821285	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg19_v1_chrX_-_41782230_41782421	0.0819021	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v1_chr12_-_118406027_118406027	0.0818828	SOX2.p2	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg19_v1_chr19_+_9434447_9434447	0.0818028	SOX2.p2	NM_001202406|ZNF559|84527|zinc finger protein 559	NM_001202407|ZNF559|84527|zinc finger protein 559	NM_001202408|ZNF559|84527|zinc finger protein 559	NM_001202409|ZNF559|84527|zinc finger protein 559	NM_001202410|ZNF559|84527|zinc finger protein 559	NM_001202411|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559
hg19_v1_chr1_-_44482996_44483011	0.0815025	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr15_-_52263947_52263978	0.081479	SOX2.p2	BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v1_chr10_+_104179570_104179588	0.0813794	SOX2.p2	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15	BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15
hg19_v1_chr14_-_58618807_58618906	0.0813737	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr15_+_93447702_93447819	0.0813414	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr17_+_61627916_61627973	0.0812565	SOX2.p2	U94747|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr4_+_184580419_184580480	0.081095	SOX2.p2	NM_021942|C4orf41|60684|chromosome 4 open reading frame 41	NM_199053|C4orf41|60684|chromosome 4 open reading frame 41	AL833571|C4orf41|60684|chromosome 4 open reading frame 41	AK096345|C4orf41|60684|chromosome 4 open reading frame 41	BX648499|C4orf41|60684|chromosome 4 open reading frame 41	BX647127|C4orf41|60684|chromosome 4 open reading frame 41	BX538044|C4orf41|60684|chromosome 4 open reading frame 41	BC040530|C4orf41|60684|chromosome 4 open reading frame 41	BC051724|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr3_-_194353908_194353945	0.0810585	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44	HQ258241|TMEM44|93109|transmembrane protein 44
hg19_v1_chr19_+_50016490_50016498	0.0810359	SOX2.p2	BC008734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha
hg19_v1_chr7_-_37488554_37488556	0.0809898	SOX2.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr1_-_168698412_168698447	0.0808265	SOX2.p2	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg19_v1_chr3_-_155394104_155394204	0.0807082	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr3_+_156392369_156392435	0.0806287	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr13_+_103451398_103451885	0.0804564	SOX2.p2	AF411385|BIVM|54841|basic, immunoglobulin-like variable motif containing	NM_001159596|BIVM|54841|basic, immunoglobulin-like variable motif containing	NM_017693|BIVM|54841|basic, immunoglobulin-like variable motif containing	AK290658|BIVM|54841|basic, immunoglobulin-like variable motif containing	AK304391|BIVM|54841|basic, immunoglobulin-like variable motif containing	BC112339|BIVM|54841|basic, immunoglobulin-like variable motif containing
hg19_v1_chr11_-_102401430_102401489	0.0803946	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v1_chr5_+_180650709_180650742	0.080164	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr11_+_22689653_22689653	0.0801516	SOX2.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg19_v1_chr6_-_31830551_31830592	0.0801447	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg19_v1_chr9_-_116061319_116061319	0.0800703	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg19_v1_chr20_-_1600589_1600688	0.0799509	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg19_v1_chr19_-_40324747_40324849	0.0797318	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v1_chr5_+_140749830_140749961	0.0796809	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr12_+_45609867_45609875	0.079607	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg19_v1_chr22_-_44893903_44894333	0.0792408	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg19_v1_chr8_+_80523048_80523048	0.0790855	SOX2.p2	NM_001199214|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2
hg19_v1_chr1_+_90098624_90098642	0.0789563	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr1_-_1624180_1624254	0.0786534	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr17_-_63557615_63557744	0.078605	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg19_v1_chr2_+_219264719_219264843	0.0783524	SOX2.p2	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg19_v1_chr19_+_41770349_41770527	0.0783489	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr14_-_50698090_50698111	0.0782729	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg19_v1_chr19_-_10613266_10613611	0.0782236	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg19_v1_chr3_-_111314181_111314181	0.0781357	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr8_+_40010986_40011051	0.0781097	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4
hg19_v1_chr3_-_160283071_160283118	0.0780984	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr14_-_21979364_21979506	0.078065	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg19_v1_chr13_+_48877887_48877896	0.0780565	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg19_v1_chr7_-_105162551_105162772	0.0780254	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg19_v1_chr22_+_40297085_40297163	0.0779218	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr19_-_17414083_17414281	0.0779183	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg19_v1_chr19_+_13135745_13135776	0.0778483	SOX2.p2	L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr1_+_63833324_63833337	0.0776683	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg19_v1_chr6_-_167040506_167040649	0.0775991	SOX2.p2	DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr6_+_123100645_123100753	0.0775806	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr3_-_47823275_47823303	0.0773486	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr8_-_72274466_72274485	0.0773289	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr7_-_27192201_27192216	0.0771519	SOX2.p2	
hg19_v1_chr18_+_657674_657748	0.0770688	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr1_+_202183282_202183282	0.0769558	SOX2.p2	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v1_chr1_+_155293727_155293727	0.0769315	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr19_-_17571724_17571762	0.0768924	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg19_v1_chr3_-_155421996_155421996	0.076848	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr1_+_153606550_153606574	0.0768161	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr12_-_80307690_80307690	0.0767938	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chrX_+_140677834_140677894	0.0767169	SOX2.p2	NM_145662|SPANXA2|728712|SPANX family, member A2	AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1
hg19_v1_chr16_+_76311175_76311305	0.0765623	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg19_v1_chr2_+_160568973_160569017	0.0765219	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr22_-_50221445_50221517	0.0765019	SOX2.p2	AK304776|BRD1|23774|bromodomain containing 1
hg19_v1_chr4_+_106067031_106067031	0.0763386	SOX2.p2	BX640738|TET2|54790|tet methylcytosine dioxygenase 2	NM_017628|TET2|54790|tet methylcytosine dioxygenase 2
hg19_v1_chr12_-_75603510_75603510	0.0763097	SOX2.p2	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr15_+_91447419_91447419	0.0763087	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg19_v1_chr1_-_31538486_31538549	0.076283	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr9_+_116356407_116356556	0.0759967	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr17_-_30669133_30669281	0.0759575	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr5_-_135231504_135231515	0.0758901	SOX2.p2	BC066283|IL9|3578|interleukin 9	BC066284|IL9|3578|interleukin 9	BC066285|IL9|3578|interleukin 9	BC066286|IL9|3578|interleukin 9	BC066287|IL9|3578|interleukin 9	M30134|IL9|3578|interleukin 9	NM_000590|IL9|3578|interleukin 9	S63356|IL9|3578|interleukin 9	X17543|IL9|3578|interleukin 9
hg19_v1_chr2_+_74120092_74120111	0.07589	SOX2.p2	NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chrY_-_19992072_19992099	0.0756657	SOX2.p2	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr1_-_173638970_173639002	0.0756144	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg19_v1_chr5_-_35118223_35118223	0.075586	SOX2.p2	NM_001204314|PRLR|5618|prolactin receptor	NM_001204315|PRLR|5618|prolactin receptor	NM_001204316|PRLR|5618|prolactin receptor	NM_001204317|PRLR|5618|prolactin receptor	NM_001204318|PRLR|5618|prolactin receptor
hg19_v1_chr15_+_48010685_48010685	0.0755034	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v1_chr11_-_27742224_27742325	0.0754708	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr3_+_184038445_184038482	0.0754155	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr9_-_21305311_21305311	0.0754053	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr2_+_44502596_44502674	0.0751939	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg19_v1_chr12_+_22778008_22778078	0.0751582	SOX2.p2	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr2_+_207804277_207804323	0.0749914	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg19_v1_chr1_+_93913566_93913878	0.0749325	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg19_v1_chr19_+_13135809_13135860	0.0747127	SOX2.p2	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr21_-_40685418_40685526	0.0746828	SOX2.p2	BC140079|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292465|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292466|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080586|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080587|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ238214|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr11_-_104034685_104034903	0.0746302	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg19_v1_chr1_-_182361311_182361370	0.0746146	SOX2.p2	AK122784|GLUL|2752|glutamate-ammonia ligase	NM_001033044|GLUL|2752|glutamate-ammonia ligase	NM_002065|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr21_-_27543445_27543445	0.0744979	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr12_-_75603214_75603243	0.0744763	SOX2.p2	AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr2_+_238536183_238536535	0.0744491	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg19_v1_chr6_+_47749774_47749802	0.0744188	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5	HQ258199|OPN5|221391|opsin 5
hg19_v1_chr5_+_140560979_140560979	0.0743171	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg19_v1_chr5_+_92920592_92920744	0.0743033	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr17_+_72581056_72581056	0.0742441	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg19_v1_chr5_+_147774274_147774339	0.0740263	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg19_v1_chr5_-_122759003_122759285	0.0740055	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg19_v1_chr7_-_20826503_20826565	0.0739931	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg19_v1_chr10_+_91461333_91461418	0.0739558	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg19_v1_chr9_+_131644780_131644780	0.073908	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr4_+_40198526_40198757	0.0739041	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg19_v1_chr19_-_12780206_12780249	0.0738952	SOX2.p2	BC001192|WDR83OS|51398|WD repeat domain 83 opposite strand	AK311944|WDR83OS|51398|WD repeat domain 83 opposite strand	AF059620|WDR83OS|51398|WD repeat domain 83 opposite strand	BC042919|WDR83OS|51398|WD repeat domain 83 opposite strand	BC061912|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr1_+_145507556_145507666	0.0738566	SOX2.p2	NM_005105|RBM8A|9939|RNA binding motif protein 8A	BC071577|RBM8A|9939|RNA binding motif protein 8A	BC017088|RBM8A|9939|RNA binding motif protein 8A	AF198620|RBM8A|9939|RNA binding motif protein 8A	AF182415|RBM8A|9939|RNA binding motif protein 8A	BC017770|RBM8A|9939|RNA binding motif protein 8A	AK075009|RBM8A|9939|RNA binding motif protein 8A	AF161463|RBM8A|9939|RNA binding motif protein 8A	AF231511|RBM8A|9939|RNA binding motif protein 8A	AF127761|RBM8A|9939|RNA binding motif protein 8A	AF299118|RBM8A|9939|RNA binding motif protein 8A	CR541805|RBM8A|9939|RNA binding motif protein 8A	CR541823|RBM8A|9939|RNA binding motif protein 8A	GQ129283|RBM8A|9939|RNA binding motif protein 8A	GQ129284|RBM8A|9939|RNA binding motif protein 8A
hg19_v1_chr21_-_43735705_43735760	0.0737449	SOX2.p2	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)	AF432265|TFF3|7033|trefoil factor 3 (intestinal)
hg19_v1_chr2_+_14772809_14772834	0.0735751	SOX2.p2	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr16_+_1128780_1128868	0.0734756	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg19_v1_chr1_-_17764811_17764913	0.073352	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr10_-_99052429_99052449	0.073332	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19	NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr17_-_79869033_79869105	0.0732235	SOX2.p2	AK297996|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine	AK093328|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine
hg19_v1_chr22_-_50221195_50221337	0.073217	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg19_v1_chr12_-_6716475_6716528	0.0731272	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chr2_+_241375235_241375295	0.0731256	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg19_v1_chr1_+_53527822_53527900	0.0727253	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_001199081|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg19_v1_chr11_-_73881859_73882278	0.0727238	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg19_v1_chr6_+_41040713_41040732	0.072555	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr6_-_107435635_107435635	0.0724281	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg19_v1_chrX_+_22291029_22291108	0.0722572	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645	HQ258412|ZNF645|158506|zinc finger protein 645	HQ258552|ZNF645|158506|zinc finger protein 645
hg19_v1_chr6_-_105850765_105850927	0.0721384	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg19_v1_chr6_+_28249313_28249487	0.0720143	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg19_v1_chr1_-_45672225_45672278	0.0719908	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg19_v1_chr19_+_1026627_1026697	0.0719673	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg19_v1_chr10_+_28822508_28822585	0.0718001	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr6_-_167040659_167040679	0.0717533	SOX2.p2	X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr19_-_11450254_11450347	0.0716586	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg19_v1_chr13_+_53602829_53602995	0.0713688	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	HQ258281|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg19_v1_chr12_+_132379262_132379284	0.0709719	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg19_v1_chr7_-_8301767_8301815	0.0709119	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chrX_+_15525430_15525430	0.0708727	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr2_+_79347487_79347586	0.0708517	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg19_v1_chr1_-_152086555_152086555	0.0708344	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg19_v1_chr12_+_22778085_22778210	0.0708013	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr20_+_42086468_42086516	0.0707015	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg19_v1_chr16_-_4588738_4588846	0.0704404	SOX2.p2	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chrX_+_77166223_77166262	0.0702578	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr12_-_122107559_122107559	0.0701485	SOX2.p2	BC057760|MORN3|283385|MORN repeat containing 3	NM_173855|MORN3|283385|MORN repeat containing 3
hg19_v1_chr6_-_24583454_24583454	0.0701401	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr10_-_11653529_11653744	0.0699447	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr10_+_124320180_124320272	0.0696862	SOX2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg19_v1_chr9_-_114521792_114521812	0.0696225	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg19_v1_chr10_+_93558281_93558447	0.0696011	SOX2.p2	AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr19_-_42947050_42947199	0.0695854	SOX2.p2	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17	BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17	NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17
hg19_v1_chr14_-_106725620_106725737	0.069569	SOX2.p2	AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31	X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23	AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC015760|IGHM|3507|immunoglobulin heavy constant mu	BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097950|IGHM|3507|immunoglobulin heavy constant mu	AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg19_v1_chr8_-_66753968_66753968	0.0695012	SOX2.p2	NM_001242318|PDE7A|5150|phosphodiesterase 7A
hg19_v1_chr2_-_170430312_170430423	0.0693612	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg19_v1_chr12_-_102874158_102874273	0.069179	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr5_+_150157507_150157507	0.0691731	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg19_v1_chr7_-_66460403_66460598	0.0691229	SOX2.p2	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg19_v1_chr1_+_198608136_198608210	0.0688308	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr14_+_24439082_24439315	0.0687935	SOX2.p2	NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v1_chr17_-_39942937_39943029	0.0687675	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg19_v1_chrX_-_15683153_15683153	0.0687406	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chr19_+_19976625_19976743	0.0687358	SOX2.p2	BC053607|ZNF253|56242|zinc finger protein 253	BC014148|ZNF253|56242|zinc finger protein 253	NM_021047|ZNF253|56242|zinc finger protein 253	BC065572|ZNF253|56242|zinc finger protein 253	AK074757|ZNF253|56242|zinc finger protein 253	BC125063|ZNF253|56242|zinc finger protein 253	BC125064|ZNF253|56242|zinc finger protein 253
hg19_v1_chr1_-_1677430_1677493	0.0687303	SOX2.p2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_001199787|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr2_-_203776200_203776429	0.0687152	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg19_v1_chr14_-_24036939_24037064	0.0686963	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr2_-_128439359_128439359	0.0684797	SOX2.p2	NM_001161404|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr7_+_99070515_99070685	0.0684222	SOX2.p2	BC089424|ZNF789|285989|zinc finger protein 789	BC050286|ZNF789|285989|zinc finger protein 789	BX648360|ZNF789|285989|zinc finger protein 789
hg19_v1_chr6_-_48078909_48078942	0.0683903	SOX2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg19_v1_chr2_-_242556883_242556915	0.0683867	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg19_v1_chr14_-_105261850_105261895	0.0681503	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr12_+_57943843_57944051	0.0681018	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr6_+_17282294_17282294	0.0680073	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr14_-_94423766_94423766	0.0677579	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg19_v1_chr15_-_31283617_31283918	0.0675815	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg19_v1_chrX_+_41193409_41193505	0.0674869	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr5_+_52284903_52285337	0.0669385	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr15_-_40331316_40331388	0.0669185	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg19_v1_chr2_+_231729638_231729653	0.0665376	SOX2.p2	AK075361|ITM2C|81618|integral membrane protein 2C	AK090975|ITM2C|81618|integral membrane protein 2C	AK303199|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr10_-_74114655_74114701	0.0664992	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg19_v1_chr16_+_1728290_1728323	0.066458	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr3_-_48936227_48936436	0.066296	SOX2.p2	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
hg19_v1_chrX_-_2847315_2847348	0.0661106	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg19_v1_chr17_-_20946088_20946457	0.0660933	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg19_v1_chr11_+_68367824_68367929	0.0659587	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg19_v1_chr22_-_31742329_31742340	0.0658937	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr2_+_189839113_189839123	0.0658251	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chrX_-_51812249_51812367	0.0657867	SOX2.p2	BC063838|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr17_+_27920479_27920526	0.0656866	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg19_v1_chr3_+_129159138_129159138	0.0655223	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr1_+_29241002_29241160	0.0654859	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg19_v1_chr3_-_187009469_187009809	0.0654741	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v1_chr4_+_84457390_84457772	0.0654649	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v1_chr4_+_123161119_123161129	0.0653618	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr10_+_105726935_105726994	0.0653346	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg19_v1_chr10_-_97321094_97321184	0.0653234	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg19_v1_chr22_+_31477231_31477334	0.0652712	SOX2.p2	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg19_v1_chr3_+_38307297_38307396	0.0652143	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg19_v1_chr10_-_5446781_5446796	0.0651965	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr14_+_38677186_38677203	0.065176	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg19_v1_chrX_-_15872921_15872937	0.0651691	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr17_-_46667596_46667630	0.0651439	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg19_v1_chr20_-_34329872_34330023	0.0650225	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr1_+_65730423_65730436	0.065016	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chr15_+_39542884_39542966	0.0649869	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg19_v1_chr3_+_129159150_129159175	0.0648533	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr2_+_46926049_46926098	0.0646938	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr3_+_118864996_118864997	0.0646446	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg19_v1_chr3_+_129159089_129159136	0.0645709	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr6_+_123110345_123110490	0.0645544	SOX2.p2	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr5_-_176326314_176326332	0.0644556	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg19_v1_chr6_-_111888520_111888520	0.0643472	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg19_v1_chr4_+_170541728_170541987	0.0642292	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg19_v1_chr3_-_194354304_194354423	0.0641491	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg19_v1_chr22_+_29168628_29168661	0.0640902	SOX2.p2	AK289516|CCDC117|150275|coiled-coil domain containing 117	NM_173510|CCDC117|150275|coiled-coil domain containing 117
hg19_v1_chr3_+_129159075_129159087	0.0639264	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr4_+_8951476_8951476	0.0638418	SOX2.p2	NM_001040071|LOC650293|650293|seven transmembrane helix receptor
hg19_v1_chr12_+_72080136_72080318	0.0636004	SOX2.p2	AK001798|TMEM19|55266|transmembrane protein 19	AK223148|TMEM19|55266|transmembrane protein 19	AK315587|TMEM19|55266|transmembrane protein 19
hg19_v1_chr12_-_120907411_120907497	0.0635897	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr20_+_1246959_1246998	0.0635534	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr16_+_70333096_70333200	0.0634799	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr1_+_153190059_153190059	0.0634269	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg19_v1_chr20_-_36152952_36152952	0.063391	SOX2.p2	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg19_v1_chr7_+_55980330_55980367	0.063297	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg19_v1_chr5_+_86564044_86564089	0.0632055	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr5_-_178054072_178054088	0.0631509	SOX2.p2	AK308879|CLK4|57396|CDC-like kinase 4	BC151233|CLK4|57396|CDC-like kinase 4
hg19_v1_chr6_+_13925423_13925463	0.0631426	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg19_v1_chr12_+_98909331_98909404	0.0629503	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg19_v1_chr5_-_149466126_149466166	0.0628981	SOX2.p2	AB208819|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr2_+_10091791_10091910	0.0628866	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg19_v1_chr9_+_27524311_27524334	0.0628817	SOX2.p2	AF146759|IFNK|56832|interferon, kappa	AF315688|IFNK|56832|interferon, kappa	NM_020124|IFNK|56832|interferon, kappa	AY358855|IFNK|56832|interferon, kappa
hg19_v1_chr16_-_75300678_75300706	0.062835	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr1_+_159557615_159557711	0.0627676	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg19_v1_chr2_+_113279582_113279727	0.062497	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg19_v1_chr6_-_105850958_105850958	0.0624437	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg19_v1_chr12_-_28124915_28124915	0.0623396	SOX2.p2	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chrX_-_140786561_140786654	0.0623145	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg19_v1_chr6_-_123957941_123958237	0.0621834	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr4_+_86749045_86749064	0.0621623	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr14_-_50100657_50100736	0.0621387	SOX2.p2	BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2	BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2	BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2	AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2
hg19_v1_chr19_-_46272496_46272496	0.0620856	SOX2.p2	NM_175875|SIX5|147912|SIX homeobox 5
hg19_v1_chr19_-_1567875_1568056	0.0620475	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr14_-_24777153_24777155	0.0620276	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr2_+_190648810_190648810	0.0618328	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr6_-_31774725_31774765	0.0618185	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr8_-_82395401_82395475	0.0617728	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg19_v1_chr2_-_48132656_48132931	0.0616955	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg19_v1_chr12_-_6716550_6716563	0.0615193	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chrX_-_19817907_19817918	0.0613605	SOX2.p2	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg19_v1_chrX_+_1733940_1734067	0.0612536	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr17_-_27045172_27045285	0.0611998	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg19_v1_chr13_+_98086681_98086724	0.0611974	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg19_v1_chr4_+_17616246_17616286	0.0610554	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg19_v1_chr11_-_61129462_61129839	0.0609724	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr5_+_140810181_140810205	0.0609105	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr16_+_72698996_72699132	0.0608943	SOX2.p2	
hg19_v1_chr2_+_170590454_170590521	0.0607876	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr8_+_64081108_64081181	0.0605515	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr12_-_54582588_54582785	0.0604877	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v1_chr16_-_75299713_75299938	0.0604326	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr12_-_120907535_120907613	0.0603961	SOX2.p2	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr4_+_75023807_75023924	0.060368	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg19_v1_chr21_-_40721010_40721050	0.0602888	SOX2.p2	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr1_+_112938857_112938880	0.0602673	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|uncharacterized LOC100129406
hg19_v1_chr1_-_31538553_31538631	0.0600353	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chrX_-_16730669_16731058	0.0598823	SOX2.p2	NM_175859|CTPS2|56474|CTP synthase II	BC034986|CTPS2|56474|CTP synthase II	AK125348|CTPS2|56474|CTP synthase II	AF226667|CTPS2|56474|CTP synthase II	AK024070|CTPS2|56474|CTP synthase II	AK023549|CTPS2|56474|CTP synthase II	NM_019857|CTPS2|56474|CTP synthase II
hg19_v1_chr10_+_111969988_111969988	0.0596051	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg19_v1_chr19_+_50192440_50192561	0.0594629	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr11_+_6947591_6947693	0.059454	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg19_v1_chr9_+_35042222_35042262	0.0594183	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr1_-_21113090_21113146	0.0593551	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr2_-_85788550_85788633	0.0593368	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr4_+_119948322_119948327	0.0593011	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg19_v1_chr12_+_98909410_98909413	0.0592657	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr13_-_52733995_52733995	0.0592112	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr9_-_99064385_99064433	0.0590311	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v1_chr17_+_61627841_61627849	0.0589261	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr11_+_111807857_111807960	0.0589139	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr3_-_46904879_46904972	0.0588832	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg19_v1_chr15_-_79103571_79103930	0.0588215	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg19_v1_chrX_+_51927918_51928036	0.0587527	SOX2.p2	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr1_+_248058857_248058888	0.0587032	SOX2.p2	BC146848|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831764|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831842|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	NM_001001957|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3
hg19_v1_chr17_-_56065596_56065640	0.0586768	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr1_+_223566714_223566817	0.0586589	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg19_v1_chr17_+_61627850_61627879	0.0585522	SOX2.p2	AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr11_+_114271294_114271368	0.0585319	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr5_-_149466094_149466108	0.0585279	SOX2.p2	BC129939|CSF1R|1436|colony stimulating factor 1 receptor	BX648599|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chrX_+_106161589_106161589	0.05845	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg19_v1_chr2_+_27799388_27799392	0.0584156	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg19_v1_chr3_+_184032849_184033283	0.0584062	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr7_-_8301681_8301752	0.0582126	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr9_+_123837235_123837289	0.0581827	SOX2.p2	AK307387|CNTRL|11064|centriolin	BC089415|CNTRL|11064|centriolin
hg19_v1_chr10_+_13203547_13203589	0.0580961	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr3_+_191046873_191047460	0.0578586	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg19_v1_chr17_+_37896219_37896219	0.057651	SOX2.p2	AK290115|GRB7|2886|growth factor receptor-bound protein 7	NM_001242443|GRB7|2886|growth factor receptor-bound protein 7
hg19_v1_chr5_-_134871638_134871655	0.0574971	SOX2.p2	BC008687|NEUROG1|4762|neurogenin 1	BC028226|NEUROG1|4762|neurogenin 1	NM_006161|NEUROG1|4762|neurogenin 1	AB593107|NEUROG1|4762|neurogenin 1
hg19_v1_chr4_+_119948273_119948273	0.0573903	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg19_v1_chr3_+_58223228_58223338	0.0572615	SOX2.p2	NM_020676|ABHD6|57406|abhydrolase domain containing 6	AK225942|ABHD6|57406|abhydrolase domain containing 6	AK172797|ABHD6|57406|abhydrolase domain containing 6	AK313168|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr16_-_70557430_70557459	0.0571605	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg19_v1_chr18_+_657633_657663	0.0568583	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chrX_+_70503534_70503553	0.0567895	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr5_+_140810126_140810168	0.0567756	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr11_+_94800316_94800372	0.0567178	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr14_-_24777184_24777188	0.0566869	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chrX_+_119384490_119384683	0.0566504	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg19_v1_chr1_-_179833581_179833588	0.056642	SOX2.p2	
hg19_v1_chr15_+_74218794_74218809	0.0565211	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr17_-_31204071_31204176	0.0565124	SOX2.p2	AK127942|MYO1D|4642|myosin ID
hg19_v1_chr15_+_23810808_23810928	0.0565008	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr3_-_178969644_178969644	0.0562035	SOX2.p2	NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr13_-_39564857_39564995	0.0561641	SOX2.p2	DQ891676|STOML3|161003|stomatin (EPB72)-like 3	EU176604|STOML3|161003|stomatin (EPB72)-like 3	AK313632|STOML3|161003|stomatin (EPB72)-like 3	BC025760|STOML3|161003|stomatin (EPB72)-like 3	AK304159|STOML3|161003|stomatin (EPB72)-like 3	NM_001144033|STOML3|161003|stomatin (EPB72)-like 3	NM_145286|STOML3|161003|stomatin (EPB72)-like 3
hg19_v1_chr15_-_43212911_43213053	0.0561018	SOX2.p2	AF525400|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg19_v1_chr11_-_65326129_65326252	0.0560621	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr14_+_91580356_91580455	0.0560574	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr20_+_30326903_30327171	0.0559986	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg19_v1_chr19_+_41770329_41770330	0.0559074	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr17_-_56494889_56494898	0.0558165	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg19_v1_chr15_-_45670955_45670979	0.05581	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v1_chr8_-_110661007_110661131	0.0557609	SOX2.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr17_+_38474544_38474551	0.0556576	SOX2.p2	AK130192|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr16_-_20416032_20416058	0.0556527	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg19_v1_chr12_-_123706393_123706440	0.0556035	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg19_v1_chr1_-_149859465_149859562	0.0555909	SOX2.p2	NM_175065|HIST2H2AB|317772|histone cluster 2, H2ab	AK289725|HIST2H2BE|8349|histone cluster 2, H2be
hg19_v1_chr5_-_77844975_77845071	0.0555548	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr2_-_128568744_128568768	0.0554765	SOX2.p2	BC005401|WDR33|55339|WD repeat domain 33	NM_001006622|WDR33|55339|WD repeat domain 33	NM_001006623|WDR33|55339|WD repeat domain 33	NM_018383|WDR33|55339|WD repeat domain 33
hg19_v1_chr1_+_28696056_28696394	0.0554426	SOX2.p2	NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4	CR749449|PHACTR4|65979|phosphatase and actin regulator 4	AK025436|PHACTR4|65979|phosphatase and actin regulator 4	BC029266|PHACTR4|65979|phosphatase and actin regulator 4	BC016152|PHACTR4|65979|phosphatase and actin regulator 4	BC068508|PHACTR4|65979|phosphatase and actin regulator 4
hg19_v1_chr5_+_34839268_34839327	0.0554363	SOX2.p2	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like	NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like
hg19_v1_chr19_+_21324826_21324887	0.0553637	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr1_-_179112178_179112223	0.055212	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg19_v1_chr20_+_30697512_30697570	0.0551754	SOX2.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr16_-_30546145_30546235	0.0548647	SOX2.p2	AB209546|ZNF747|65988|zinc finger protein 747	AK054567|ZNF747|65988|zinc finger protein 747	BC001361|ZNF747|65988|zinc finger protein 747	NM_023931|ZNF747|65988|zinc finger protein 747
hg19_v1_chr6_+_56911310_56911383	0.0548041	SOX2.p2	BC041125|KIAA1586|57691|KIAA1586	NM_020931|KIAA1586|57691|KIAA1586
hg19_v1_chr8_+_110346549_110346637	0.0547843	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg19_v1_chrX_-_74743299_74743336	0.0547697	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr15_+_84116172_84116285	0.0547341	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr17_-_46655544_46655742	0.0547063	SOX2.p2	AL137449|HOXB4|3214|homeobox B4	BC049204|HOXB4|3214|homeobox B4	NM_024015|HOXB4|3214|homeobox B4
hg19_v1_chr11_+_57365577_57365767	0.054333	SOX2.p2	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr22_+_30279201_30279321	0.0542924	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg19_v1_chr9_-_132586440_132586534	0.0541935	SOX2.p2	NM_000113|TOR1A|1861|torsin family 1, member A (torsin A)	AK294677|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr6_-_33385662_33385709	0.0541155	SOX2.p2	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg19_v1_chr3_+_138067678_138067758	0.0540448	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr11_-_82782870_82782877	0.0539798	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr20_-_34330179_34330261	0.0537837	SOX2.p2	NM_001242599|RBM39|9584|RNA binding motif protein 39	NM_001242600|RBM39|9584|RNA binding motif protein 39	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr15_+_58724174_58724231	0.0537677	SOX2.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic	HQ258274|LIPC|3990|lipase, hepatic
hg19_v1_chr11_+_94300473_94300683	0.0536854	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg19_v1_chr1_-_26324534_26324647	0.0536248	SOX2.p2	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg19_v1_chr10_-_13390018_13390061	0.0536175	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr1_-_1243246_1243537	0.0536113	SOX2.p2	BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v1_chr12_+_130647002_130647019	0.0535612	SOX2.p2	BC070037|FZD10|11211|frizzled family receptor 10	NM_007197|FZD10|11211|frizzled family receptor 10
hg19_v1_chr1_-_93399531_93399654	0.0535427	SOX2.p2	
hg19_v1_chr10_+_70482210_70482316	0.0534173	SOX2.p2	BC026036|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC089420|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg19_v1_chr6_+_56954978_56954984	0.0534113	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg19_v1_chr2_+_220309373_220309394	0.0533276	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg19_v1_chr2_+_177028804_177028804	0.0533241	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg19_v1_chr7_-_100061893_100061893	0.0532807	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg19_v1_chr9_-_132597561_132597598	0.053258	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr15_+_40886217_40886233	0.052944	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr19_-_22379752_22379752	0.0529279	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg19_v1_chr14_+_103800534_103800546	0.0528325	SOX2.p2	AL080102|EIF5|1983|eukaryotic translation initiation factor 5	AK026933|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr5_+_53751430_53751619	0.0528301	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	HQ258075|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg19_v1_chr10_-_128209996_128210009	0.0527926	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg19_v1_chr5_-_33891967_33892123	0.0526773	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr13_-_111567335_111567395	0.0523662	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10
hg19_v1_chr11_-_115088628_115088669	0.0521947	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr20_+_30697291_30697447	0.0520511	SOX2.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr18_-_29264394_29264685	0.0519992	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr6_-_38670915_38670919	0.0519279	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg19_v1_chr19_+_38397880_38397945	0.0519005	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr14_+_77648082_77648102	0.0517926	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg19_v1_chr1_-_190446701_190446770	0.0517301	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr15_-_34502188_34502262	0.0517135	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29
hg19_v1_chr14_+_54976545_54976677	0.051703	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg19_v1_chr14_+_90863302_90863345	0.0515108	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr6_+_56954985_56955008	0.0514423	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg19_v1_chr1_+_150039815_150039913	0.0514058	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr15_+_82944772_82944812	0.0510542	SOX2.p2	AK309746|AGSK1|80154|golgin subfamily A member 2-like	AK310769|AGSK1|80154|golgin subfamily A member 2-like	BC072390|AGSK1|80154|golgin subfamily A member 2-like	AK291684|AGSK1|80154|golgin subfamily A member 2-like	AK309420|AGSK1|80154|golgin subfamily A member 2-like	AK309732|AGSK1|80154|golgin subfamily A member 2-like	AK307285|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr16_-_3930685_3930711	0.0508537	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg19_v1_chr2_+_10183630_10183955	0.0508019	SOX2.p2	BC063286|KLF11|8462|Kruppel-like factor 11	NM_003597|KLF11|8462|Kruppel-like factor 11	AK315345|KLF11|8462|Kruppel-like factor 11	AF272830|KLF11|8462|Kruppel-like factor 11	AK289816|KLF11|8462|Kruppel-like factor 11	BC069383|KLF11|8462|Kruppel-like factor 11	BC074922|KLF11|8462|Kruppel-like factor 11	AF028008|KLF11|8462|Kruppel-like factor 11	AJ275989|KLF11|8462|Kruppel-like factor 11	AK316439|KLF11|8462|Kruppel-like factor 11	NM_001177716|KLF11|8462|Kruppel-like factor 11
hg19_v1_chr3_-_47823333_47823335	0.0507145	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr12_+_45609832_45609866	0.0506329	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg19_v1_chr6_-_29455678_29455733	0.0504828	SOX2.p2	BC069127|MAS1L|116511|MAS1 oncogene-like	BC069345|MAS1L|116511|MAS1 oncogene-like	BC101176|MAS1L|116511|MAS1 oncogene-like	BC101177|MAS1L|116511|MAS1 oncogene-like	NM_052967|MAS1L|116511|MAS1 oncogene-like	BC095511|MAS1L|116511|MAS1 oncogene-like
hg19_v1_chr4_-_54930706_54930764	0.0504251	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr19_-_14629160_14629226	0.0504024	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr7_-_105319608_105319608	0.0503632	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg19_v1_chr11_-_118901570_118901619	0.0503403	SOX2.p2	BC014663|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AB209026|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK294993|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK298395|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK300646|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK289642|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK312628|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164277|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164278|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164279|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001467|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v1_chr21_-_40685697_40685711	0.0501522	SOX2.p2	NM_001007246|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_018963|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_033656|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr5_+_133707105_133707288	0.0500918	SOX2.p2	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B
hg19_v1_chr19_-_2717272_2717427	0.0499742	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg19_v1_chr10_+_111967302_111967416	0.0498767	SOX2.p2	BC035128|MXI1|4601|MAX interactor 1	NM_130439|MXI1|4601|MAX interactor 1
hg19_v1_chr11_+_64018996_64019118	0.049794	SOX2.p2	BC146645|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC142681|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC032659|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	AB385031|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)
hg19_v1_chr20_-_34241830_34241830	0.0497638	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg19_v1_chr1_-_46152183_46152301	0.0497342	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg19_v1_chr20_-_4804067_4804321	0.0496948	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr1_-_31345361_31345435	0.0496815	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg19_v1_chr5_+_137673953_137673955	0.0496645	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr13_+_97999289_97999300	0.0495649	SOX2.p2	
hg19_v1_chr19_+_21106058_21106115	0.0494102	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85
hg19_v1_chr3_+_39371196_39371294	0.0493919	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg19_v1_chr5_+_137673956_137674010	0.0493388	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr6_-_31509769_31509832	0.0492409	SOX2.p2	AK127767|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK294939|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK298194|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK316469|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295854|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AB209217|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr6_-_127664511_127664535	0.0492247	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chrX_-_32430370_32430370	0.0491735	SOX2.p2	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg19_v1_chr17_-_26926044_26926071	0.0490755	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr3_-_56698073_56698073	0.0490583	SOX2.p2	BC029354|FAM208A|23272|family with sequence similarity 208, member A	NM_015224|FAM208A|23272|family with sequence similarity 208, member A
hg19_v1_chr1_-_52344433_52344608	0.0489493	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr19_+_41515495_41515581	0.0489295	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg19_v1_chr17_+_75283972_75283986	0.0489066	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg19_v1_chr2_-_45838383_45838432	0.0488348	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg19_v1_chr10_+_71812536_71812658	0.0487961	SOX2.p2	BC016172|H2AFY2|55506|H2A histone family, member Y2	AK022776|H2AFY2|55506|H2A histone family, member Y2	AK131057|H2AFY2|55506|H2A histone family, member Y2	AF151534|H2AFY2|55506|H2A histone family, member Y2	AF336304|H2AFY2|55506|H2A histone family, member Y2	AK022475|H2AFY2|55506|H2A histone family, member Y2
hg19_v1_chr20_-_5591487_5591688	0.0487456	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v1_chr7_-_14029286_14029323	0.0487109	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg19_v1_chr3_-_15373807_15374076	0.0486091	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg19_v1_chr3_-_178969402_178969417	0.0485499	SOX2.p2	AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr12_-_46357949_46357972	0.0483569	SOX2.p2	
hg19_v1_chr1_-_52344377_52344400	0.048305	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr1_+_155294217_155294367	0.0482898	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr5_+_140800613_140800794	0.048271	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr10_+_71812356_71812356	0.0482033	SOX2.p2	NM_018649|H2AFY2|55506|H2A histone family, member Y2
hg19_v1_chr11_+_60691911_60691959	0.0481815	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg19_v1_chr15_-_55700456_55700707	0.0480493	SOX2.p2	AK292795|CCPG1|9236|cell cycle progression 1	BC039871|CCPG1|9236|cell cycle progression 1	BC027621|CCPG1|9236|cell cycle progression 1	AB033080|CCPG1|9236|cell cycle progression 1	AK022459|CCPG1|9236|cell cycle progression 1	BC015203|CCPG1|9236|cell cycle progression 1	NM_004748|CCPG1|9236|cell cycle progression 1	NM_001204450|CCPG1|9236|cell cycle progression 1	NM_001204451|CCPG1|9236|cell cycle progression 1	NM_020739|CCPG1|9236|cell cycle progression 1
hg19_v1_chr9_+_125796845_125796845	0.0480083	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr6_+_153071931_153072041	0.0479433	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg19_v1_chr19_-_37019169_37019247	0.0479196	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg19_v1_chr2_-_24307179_24307212	0.047913	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3
hg19_v1_chr1_+_153606457_153606546	0.0478198	SOX2.p2	NM_001206612|CHTOP|26097|chromatin target of PRMT1	NM_001244664|CHTOP|26097|chromatin target of PRMT1	NM_015607|CHTOP|26097|chromatin target of PRMT1	AF261137|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr1_-_217250230_217250311	0.0478145	SOX2.p2	AB362218|ESRRG|2104|estrogen-related receptor gamma	AK131193|ESRRG|2104|estrogen-related receptor gamma	NM_001243507|ESRRG|2104|estrogen-related receptor gamma	NM_001243509|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr17_-_8079607_8079713	0.0477769	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr11_+_94800397_94800420	0.0476888	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr6_-_24877453_24877582	0.0476648	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg19_v1_chr7_-_129845216_129845337	0.0475788	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg19_v1_chr15_+_74218786_74218792	0.0475442	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr19_+_49468587_49468620	0.047505	SOX2.p2	Y09188|FTL|2512|ferritin, light polypeptide	BC018990|FTL|2512|ferritin, light polypeptide	BC002991|FTL|2512|ferritin, light polypeptide	M11147|FTL|2512|ferritin, light polypeptide
hg19_v1_chr5_+_137673702_137673814	0.0474954	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr1_+_43148359_43148810	0.0474172	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg19_v1_chr19_-_45996470_45996517	0.0473601	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg19_v1_chr8_-_93977715_93977816	0.0473557	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg19_v1_chr3_+_141457035_141457103	0.0473059	SOX2.p2	NM_001201370|RNF7|9616|ring finger protein 7	NM_014245|RNF7|9616|ring finger protein 7	NM_183237|RNF7|9616|ring finger protein 7
hg19_v1_chr6_-_105850976_105851014	0.0472152	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg19_v1_chr19_-_12992249_12992334	0.0471581	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg19_v1_chr5_-_33892292_33892298	0.0471238	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr6_-_159466019_159466183	0.0471113	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg19_v1_chr9_+_35041101_35041101	0.047094	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr2_-_89292396_89292431	0.0470658	SOX2.p2	AY894991|IGKC|3514|immunoglobulin kappa constant	BC056256|IGKC|3514|immunoglobulin kappa constant
hg19_v1_chr9_-_95166827_95166980	0.047007	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr5_+_133861685_133861926	0.0469582	SOX2.p2	D87076|PHF15|23338|PHD finger protein 15	NM_015288|PHF15|23338|PHD finger protein 15	AK290471|PHF15|23338|PHD finger protein 15
hg19_v1_chrX_-_15872905_15872913	0.0469306	SOX2.p2	
hg19_v1_chr5_+_90676131_90676193	0.04693	SOX2.p2	BC043415|LOC100129716|100129716|uncharacterized LOC100129716
hg19_v1_chr11_-_1771823_1771826	0.0468637	SOX2.p2	NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10
hg19_v1_chr7_-_36764000_36764153	0.046847	SOX2.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg19_v1_chr21_+_17102286_17102364	0.0467068	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr14_+_20923289_20923325	0.0466158	SOX2.p2	NM_001244249|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr22_+_40297183_40297312	0.0465435	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr14_+_20923341_20923355	0.0465244	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr3_+_136537860_136537979	0.0464694	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chrX_+_30233674_30233692	0.046457	SOX2.p2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2
hg19_v1_chr7_+_56119466_56119566	0.0464309	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr5_+_180650233_180650264	0.0463522	SOX2.p2	NM_033549|TRIM41|90933|tripartite motif containing 41	NM_201627|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr14_-_70826303_70826389	0.0461692	SOX2.p2	CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v1_chr22_+_31003069_31003317	0.0461018	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II
hg19_v1_chr9_-_132586398_132586415	0.0459107	SOX2.p2	BC000674|TOR1A|1861|torsin family 1, member A (torsin A)	AF007871|TOR1A|1861|torsin family 1, member A (torsin A)	AK056062|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr2_+_86947387_86947422	0.0457473	SOX2.p2	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr2_-_162931051_162931062	0.0457196	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr5_-_127873734_127873949	0.0456698	SOX2.p2	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2
hg19_v1_chr2_+_237478379_237478477	0.0454987	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg19_v1_chr15_-_37390372_37390561	0.0454476	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg19_v1_chr19_+_9938555_9938580	0.0453498	SOX2.p2	NM_001048241|UBL5|59286|ubiquitin-like 5	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg19_v1_chr20_-_39766522_39766695	0.0452571	SOX2.p2	
hg19_v1_chr4_-_2263706_2263798	0.0450444	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr9_-_4741085_4741262	0.0450295	SOX2.p2	AB021870|AK3|50808|adenylate kinase 3	DQ891660|AK3|50808|adenylate kinase 3	DQ894847|AK3|50808|adenylate kinase 3	AK027534|AK3|50808|adenylate kinase 3	BC013771|AK3|50808|adenylate kinase 3	NM_001199854|AK3|50808|adenylate kinase 3	AK001951|AK3|50808|adenylate kinase 3	AK001553|AK3|50808|adenylate kinase 3	AK298200|AK3|50808|adenylate kinase 3
hg19_v1_chr8_-_101158027_101158098	0.0450139	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg19_v1_chr2_-_38830014_38830067	0.0449876	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr10_-_33623299_33623608	0.0449398	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg19_v1_chr10_-_33247178_33247297	0.0449253	SOX2.p2	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chrX_+_129139163_129139250	0.0449182	SOX2.p2	NM_021946|BCORL1|63035|BCL6 corepressor-like 1	AK074089|BCORL1|63035|BCL6 corepressor-like 1
hg19_v1_chr8_-_103137134_103137134	0.0448693	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg19_v1_chr16_-_67217825_67217899	0.0448495	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr3_+_156392204_156392204	0.0448159	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr6_+_96025343_96025460	0.0446075	SOX2.p2	NM_024641|MANEA|79694|mannosidase, endo-alpha	BX640869|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg19_v1_chr16_-_67217403_67217479	0.0445555	SOX2.p2	AK094787|KIAA0895L|653319|KIAA0895-like	AK096855|KIAA0895L|653319|KIAA0895-like	BC080183|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr16_-_1832304_1832566	0.0445037	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr15_+_78730568_78730679	0.0444543	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	HQ258663|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr6_+_56954801_56954828	0.0444387	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg19_v1_chr5_+_140729723_140729827	0.0443619	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr6_+_41040687_41040712	0.0442276	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr16_-_23521803_23521818	0.0441967	SOX2.p2	AK024619|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	NM_015044|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr2_+_172821874_172822000	0.0440443	SOX2.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr4_-_40517913_40518003	0.044009	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr19_-_12595547_12595605	0.0439956	SOX2.p2	BC136746|ZNF709|163051|zinc finger protein 709	BC136751|ZNF709|163051|zinc finger protein 709	AK290911|ZNF709|163051|zinc finger protein 709	BC036481|ZNF709|163051|zinc finger protein 709
hg19_v1_chr2_+_86947429_86947542	0.0439219	SOX2.p2	AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr20_-_30310597_30310736	0.0439177	SOX2.p2	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg19_v1_chr10_-_45455136_45455158	0.0438489	SOX2.p2	AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)
hg19_v1_chr19_+_41699076_41699132	0.0435322	SOX2.p2	AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr4_+_3371723_3371723	0.0434245	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr12_+_32112381_32112407	0.0432917	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg19_v1_chr14_-_107013474_107013478	0.0431084	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr1_+_53925482_53925579	0.0430379	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr19_-_7701852_7701854	0.0430357	SOX2.p2	
hg19_v1_chr9_-_88715024_88715145	0.0428469	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg19_v1_chr7_-_50628744_50628774	0.0428342	SOX2.p2	AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v1_chr5_-_134735565_134735581	0.0428012	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr6_-_112080284_112080333	0.0426905	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chr19_-_44809126_44809203	0.0426649	SOX2.p2	AK315242|ZNF235|9310|zinc finger protein 235	BC105807|ZNF235|9310|zinc finger protein 235	BC143484|ZNF235|9310|zinc finger protein 235	BC117215|ZNF235|9310|zinc finger protein 235	BC143482|ZNF235|9310|zinc finger protein 235	AF027513|ZNF235|9310|zinc finger protein 235	AK307103|ZNF235|9310|zinc finger protein 235	AK300317|ZNF235|9310|zinc finger protein 235	NM_004234|ZNF235|9310|zinc finger protein 235
hg19_v1_chr15_+_74218811_74218819	0.042305	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chrX_-_154299253_154299642	0.0421414	SOX2.p2	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1
hg19_v1_chr4_-_157892466_157892490	0.04214	SOX2.p2	BC136662|PDGFC|56034|platelet derived growth factor C	BC144348|PDGFC|56034|platelet derived growth factor C
hg19_v1_chr1_-_52344406_52344424	0.0421198	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr9_+_132597651_132597717	0.0419812	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr1_-_232651227_232651311	0.04198	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr12_-_11286842_11286842	0.0419525	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg19_v1_chrX_+_134124967_134124967	0.0418955	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chrY_+_1683940_1684067	0.0418895	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr8_+_19796730_19796808	0.0418621	SOX2.p2	AK092286|LPL|4023|lipoprotein lipase	AK290290|LPL|4023|lipoprotein lipase	AK222464|LPL|4023|lipoprotein lipase	AK312311|LPL|4023|lipoprotein lipase	M15856|LPL|4023|lipoprotein lipase	X54516|LPL|4023|lipoprotein lipase
hg19_v1_chr15_-_101459410_101459538	0.0418308	SOX2.p2	
hg19_v1_chr9_+_132597728_132597802	0.0418133	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr1_-_208417635_208417664	0.0417932	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg19_v1_chr10_-_50396380_50396473	0.0417746	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg19_v1_chrX_+_44732402_44732470	0.0417595	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg19_v1_chr10_+_11047274_11047297	0.0417513	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr20_+_39765849_39765876	0.0415767	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg19_v1_chrX_+_51636608_51636798	0.0414599	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg19_v1_chr6_-_38670904_38670912	0.0414479	SOX2.p2	BC011365|GLO1|2739|glyoxalase I
hg19_v1_chr1_-_205719340_205719371	0.0414141	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr1_+_52521966_52521973	0.0414046	SOX2.p2	BC070378|BTF3L4|91408|basic transcription factor 3-like 4	AK027750|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chr6_+_118869441_118869490	0.0413248	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg19_v1_chr17_-_73775822_73775861	0.041297	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg19_v1_chr3_+_46616044_46616044	0.0412163	SOX2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg19_v1_chr10_-_115933884_115933981	0.0410392	SOX2.p2	BC100670|C10orf118|55088|chromosome 10 open reading frame 118	BC103499|C10orf118|55088|chromosome 10 open reading frame 118	BC103504|C10orf118|55088|chromosome 10 open reading frame 118	BC105632|C10orf118|55088|chromosome 10 open reading frame 118	BC152306|C10orf118|55088|chromosome 10 open reading frame 118	BC107430|C10orf118|55088|chromosome 10 open reading frame 118	BC070368|C10orf118|55088|chromosome 10 open reading frame 118	BX537964|C10orf118|55088|chromosome 10 open reading frame 118	AK307517|C10orf118|55088|chromosome 10 open reading frame 118	AK092620|C10orf118|55088|chromosome 10 open reading frame 118	BC020842|C10orf118|55088|chromosome 10 open reading frame 118	BC030557|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr6_+_168418552_168418580	0.0409943	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg19_v1_chr7_+_80267972_80268035	0.0407948	SOX2.p2	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr11_+_63753827_63753896	0.0407568	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr2_+_216986817_216986917	0.0407181	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr3_+_194407412_194407594	0.0406623	SOX2.p2	BC039689|FAM43A|131583|family with sequence similarity 43, member A	AK074503|FAM43A|131583|family with sequence similarity 43, member A
hg19_v1_chr17_-_46671043_46671158	0.0406531	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg19_v1_chr10_+_104613966_104614036	0.0406341	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg19_v1_chr17_+_66031814_66031866	0.0405342	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr5_+_176560056_176560079	0.040507	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr4_-_76598289_76598344	0.0404892	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr22_+_26825220_26825428	0.0404639	SOX2.p2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg19_v1_chr7_-_128550761_128550772	0.040459	SOX2.p2	AK122706|KCP|375616|kielin/chordin-like protein	NM_001135914|KCP|375616|kielin/chordin-like protein	NM_199349|KCP|375616|kielin/chordin-like protein
hg19_v1_chr16_-_21663908_21663933	0.040451	SOX2.p2	DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6	DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6	EU176227|IGSF6|10261|immunoglobulin superfamily, member 6	EU176324|IGSF6|10261|immunoglobulin superfamily, member 6	AK313860|IGSF6|10261|immunoglobulin superfamily, member 6	AK223286|IGSF6|10261|immunoglobulin superfamily, member 6	AK290910|IGSF6|10261|immunoglobulin superfamily, member 6	AK293703|IGSF6|10261|immunoglobulin superfamily, member 6	BC017844|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr5_+_170288863_170288999	0.0402659	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	NM_022897|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg19_v1_chr3_-_167371701_167371746	0.0401284	SOX2.p2	AK097556|WDR49|151790|WD repeat domain 49
hg19_v1_chrX_+_72223351_72223481	0.0401179	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg19_v1_chr19_+_18530211_18530240	0.0400697	SOX2.p2	BC000274|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg19_v1_chr8_-_86253863_86253942	0.0399967	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg19_v1_chr1_-_206785694_206785817	0.0399809	SOX2.p2	DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D	DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D	BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D	BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D	AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D	BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D	AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D	AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D	AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D	AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D
hg19_v1_chr1_-_169336999_169337185	0.0399774	SOX2.p2	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr17_+_61627818_61627834	0.039895	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr4_-_151936377_151936459	0.0398731	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr3_-_50360109_50360280	0.0398351	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr14_+_24641084_24641101	0.039795	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg19_v1_chr20_+_17680592_17680604	0.0397114	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg19_v1_chr22_+_41487787_41487794	0.0396988	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg19_v1_chr1_-_43919547_43919659	0.0396305	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg19_v1_chr1_-_23694497_23694900	0.0395991	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg19_v1_chr2_-_85788644_85788666	0.0395399	SOX2.p2	NM_000821|GGCX|2677|gamma-glutamyl carboxylase	NM_001142269|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr1_+_87170222_87170280	0.0395341	SOX2.p2	NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr1_+_116925991_116925991	0.0395038	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg19_v1_chr4_+_88742549_88742562	0.0395006	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chr19_+_41770336_41770347	0.0394982	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr10_+_99400469_99400499	0.0394847	SOX2.p2	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr1_+_185126191_185126350	0.0393956	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v1_chr4_-_155412411_155412554	0.03938	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr15_-_44955832_44955856	0.0393773	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg19_v1_chr12_+_54674531_54674593	0.0393178	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg19_v1_chr20_-_1165116_1165116	0.0392965	SOX2.p2	AK002052|TMEM74B|55321|transmembrane protein 74B	NM_018354|TMEM74B|55321|transmembrane protein 74B
hg19_v1_chr19_-_50266514_50266542	0.0392753	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg19_v1_chr6_-_33168163_33168253	0.0391487	SOX2.p2	BT007280|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr14_-_106691698_106691978	0.0390819	SOX2.p2	
hg19_v1_chr6_+_31783280_31783306	0.0389988	SOX2.p2	NM_005345|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chrX_-_46404821_46404891	0.0389597	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg19_v1_chr12_-_113573267_113573558	0.0389596	SOX2.p2	DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg19_v1_chr1_-_85741992_85742279	0.0389405	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr14_-_24037266_24037278	0.0389172	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr11_+_82783118_82783119	0.0387603	SOX2.p2	BC031316|LOC100506233|100506233|uncharacterized LOC100506233
hg19_v1_chr9_+_90112419_90112753	0.0387385	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr15_-_93632161_93632546	0.0387204	SOX2.p2	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg19_v1_chr12_+_7282963_7283286	0.0387031	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr5_-_71803119_71803248	0.0386025	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg19_v1_chr5_+_72251753_72251817	0.038584	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg19_v1_chr4_-_144826659_144826715	0.038407	SOX2.p2	EU176664|GYPE|2996|glycophorin E (MNS blood group)	BC064396|GYPE|2996|glycophorin E (MNS blood group)	BC017864|GYPE|2996|glycophorin E (MNS blood group)	M29610|GYPE|2996|glycophorin E (MNS blood group)	NM_002102|GYPE|2996|glycophorin E (MNS blood group)	NM_198682|GYPE|2996|glycophorin E (MNS blood group)
hg19_v1_chr9_-_132597540_132597559	0.0384043	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr20_-_3762060_3762112	0.0384001	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg19_v1_chr10_+_121578768_121578785	0.0383662	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr4_+_3294711_3294809	0.0383062	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr7_+_100209724_100209815	0.03825	SOX2.p2	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr20_+_32077904_32078039	0.0380997	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v1_chr14_-_20923266_20923266	0.0380629	SOX2.p2	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr5_+_172483285_172483483	0.0379255	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg19_v1_chr17_+_48638339_48638448	0.0378444	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr4_+_54292035_54292107	0.0378374	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr1_+_192127591_192127616	0.0378109	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr6_+_31783314_31783357	0.0377563	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK295398|HSPA1B|3304|heat shock 70kDa protein 1B	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chr12_-_49449106_49449106	0.0377238	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg19_v1_chr11_-_62473502_62473890	0.0376957	SOX2.p2	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr14_-_59951125_59951130	0.037596	SOX2.p2	
hg19_v1_chr19_+_41770285_41770328	0.0375457	SOX2.p2	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr19_-_57656569_57656569	0.0375267	SOX2.p2	AF365931|ZIM3|114026|zinc finger, imprinted 3	NM_052882|ZIM3|114026|zinc finger, imprinted 3
hg19_v1_chr1_-_186430216_186430238	0.0374543	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg19_v1_chr22_+_38598065_38598107	0.0373742	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr2_+_231729501_231729620	0.037352	SOX2.p2	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr1_+_236686738_236686738	0.0372271	SOX2.p2	AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8
hg19_v1_chr19_-_36233311_36233350	0.0372152	SOX2.p2	BC126481|IGFLR1|79713|IGF-like family receptor 1	BC126483|IGFLR1|79713|IGF-like family receptor 1	BC144205|IGFLR1|79713|IGF-like family receptor 1	AX775837|IGFLR1|79713|IGF-like family receptor 1	AK026226|IGFLR1|79713|IGF-like family receptor 1	NM_024660|IGFLR1|79713|IGF-like family receptor 1
hg19_v1_chr15_-_70390226_70390228	0.0370834	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr17_+_57642885_57643089	0.0369459	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v1_chrX_-_49121171_49121287	0.0368041	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg19_v1_chr1_+_151227237_151227258	0.0367863	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr3_-_71179736_71179745	0.0366819	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg19_v1_chr7_+_27779810_27779828	0.0366454	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr1_+_226250407_226250412	0.0366342	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr8_-_21988518_21988662	0.0365283	SOX2.p2	NM_005144|HR|55806|hairless homolog (mouse)	NM_018411|HR|55806|hairless homolog (mouse)
hg19_v1_chr7_+_123249076_123249111	0.0365033	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg19_v1_chr10_-_32635842_32636083	0.036488	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg19_v1_chrX_+_47092264_47092361	0.0364545	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr6_-_133035180_133035196	0.036421	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg19_v1_chr8_-_103666018_103666167	0.0363975	SOX2.p2	BC011538|KLF10|7071|Kruppel-like factor 10	NM_001032282|KLF10|7071|Kruppel-like factor 10	S81439|KLF10|7071|Kruppel-like factor 10
hg19_v1_chr4_+_150999412_150999638	0.0363734	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg19_v1_chr5_+_137673223_137673286	0.0363499	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr5_-_43313492_43313571	0.0363207	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr17_+_7487125_7487139	0.0363128	SOX2.p2	AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr6_-_139695739_139695783	0.0362729	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chr15_-_73925555_73925617	0.0361728	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr13_+_49684388_49684524	0.0361107	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg19_v1_chr9_-_88969256_88969322	0.0359848	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr15_+_38544119_38544671	0.0359551	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg19_v1_chr4_-_74088773_74088786	0.0359174	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg19_v1_chr2_+_234600320_234600347	0.0358997	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v1_chr22_-_31688329_31688519	0.0357711	SOX2.p2	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg19_v1_chr2_-_161056762_161056829	0.0357638	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg19_v1_chr11_+_10482677_10482686	0.035728	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg19_v1_chr1_-_156828665_156828711	0.0356384	SOX2.p2	AF064078|INSRR|3645|insulin receptor-related receptor	AK310760|INSRR|3645|insulin receptor-related receptor	NM_014215|INSRR|3645|insulin receptor-related receptor
hg19_v1_chr2_-_70313399_70313418	0.0356163	SOX2.p2	AK056822|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)
hg19_v1_chr14_-_20922841_20922962	0.0356113	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr4_+_41983712_41983839	0.035404	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg19_v1_chr19_+_41903723_41903741	0.0354	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr21_-_32253843_32253873	0.0353986	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg19_v1_chr19_-_6459735_6459875	0.0353895	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr17_-_26926015_26926038	0.0353566	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr8_+_17780510_17780536	0.0353533	SOX2.p2	BC065022|PCM1|5108|pericentriolar material 1	BC027477|PCM1|5108|pericentriolar material 1	BC140946|PCM1|5108|pericentriolar material 1
hg19_v1_chr15_+_50647105_50647215	0.035091	SOX2.p2	BC014238|LOC100129387|100129387|uncharacterized LOC100129387	BC004103|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr17_+_39411635_39411635	0.0349627	SOX2.p2	NM_030975|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr11_+_73019662_73019668	0.0347836	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v1_chr8_-_145050896_145050958	0.0347769	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg19_v1_chrX_+_47092362_47092568	0.0347551	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr7_-_130353579_130353611	0.0347007	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg19_v1_chr4_+_106631966_106631969	0.0347004	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr7_-_23509631_23509728	0.0346194	SOX2.p2	
hg19_v1_chr18_+_23713815_23713882	0.0346127	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg19_v1_chr7_+_77166750_77166863	0.0345637	SOX2.p2	NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr2_-_50574891_50574953	0.0343903	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg19_v1_chr7_+_143412938_143412962	0.0343078	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg19_v1_chrX_-_65859107_65859139	0.0342397	SOX2.p2	AK314881|EDA2R|60401|ectodysplasin A2 receptor	NM_001199687|EDA2R|60401|ectodysplasin A2 receptor
hg19_v1_chr10_+_17271277_17271297	0.0342265	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg19_v1_chr14_+_58894102_58894153	0.0341861	SOX2.p2	AK302836|KIAA0586|9786|KIAA0586	NM_001244189|KIAA0586|9786|KIAA0586	NM_001244190|KIAA0586|9786|KIAA0586	NM_001244191|KIAA0586|9786|KIAA0586	NM_001244192|KIAA0586|9786|KIAA0586	AB011158|KIAA0586|9786|KIAA0586	AK302635|KIAA0586|9786|KIAA0586	AY359881|KIAA0586|9786|KIAA0586
hg19_v1_chr2_+_170590241_170590430	0.0341217	SOX2.p2	NM_144711|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chrX_-_71792610_71792718	0.034101	SOX2.p2	EU446822|HDAC8|55869|histone deacetylase 8	EU832800|HDAC8|55869|histone deacetylase 8	GQ129378|HDAC8|55869|histone deacetylase 8	AF245664|HDAC8|55869|histone deacetylase 8	AY429539|HDAC8|55869|histone deacetylase 8	BC050433|HDAC8|55869|histone deacetylase 8	AK300895|HDAC8|55869|histone deacetylase 8	AJ277724|HDAC8|55869|histone deacetylase 8	AK294903|HDAC8|55869|histone deacetylase 8	AF212246|HDAC8|55869|histone deacetylase 8	AK298767|HDAC8|55869|histone deacetylase 8
hg19_v1_chr5_+_36876838_36876891	0.0340961	SOX2.p2	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg19_v1_chr1_+_226250421_226250431	0.0340362	SOX2.p2	AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4
hg19_v1_chr17_+_42634598_42635055	0.03398	SOX2.p2	NM_001466|FZD2|2535|frizzled family receptor 2	BC052266|FZD2|2535|frizzled family receptor 2	L37882|FZD2|2535|frizzled family receptor 2	BC113402|FZD2|2535|frizzled family receptor 2	BC113404|FZD2|2535|frizzled family receptor 2	AB017364|FZD2|2535|frizzled family receptor 2
hg19_v1_chr12_-_8765438_8765441	0.0338688	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase
hg19_v1_chr14_-_94984180_94984180	0.0338627	SOX2.p2	BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
hg19_v1_chr6_-_38670922_38670953	0.0337795	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg19_v1_chr17_-_3867585_3867818	0.0337665	SOX2.p2	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous
hg19_v1_chrX_-_53449122_53449165	0.0337059	SOX2.p2	BX640922|SMC1A|8243|structural maintenance of chromosomes 1A
hg19_v1_chr14_-_70826393_70826447	0.0336844	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v1_chr20_+_44044706_44044803	0.0336735	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg19_v1_chr6_-_131321868_131321906	0.0336423	SOX2.p2	CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr6_-_131949188_131949386	0.0335277	SOX2.p2	AF135022|MED23|9439|mediator complex subunit 23	AM393572|MED23|9439|mediator complex subunit 23	EU832308|MED23|9439|mediator complex subunit 23	EU832392|MED23|9439|mediator complex subunit 23	EU392526|MED23|9439|mediator complex subunit 23	EU392528|MED23|9439|mediator complex subunit 23	EU392529|MED23|9439|mediator complex subunit 23	EU392530|MED23|9439|mediator complex subunit 23	EU392531|MED23|9439|mediator complex subunit 23	AK315030|MED23|9439|mediator complex subunit 23	AF105332|MED23|9439|mediator complex subunit 23	EU392520|MED23|9439|mediator complex subunit 23	EU392522|MED23|9439|mediator complex subunit 23	EU392527|MED23|9439|mediator complex subunit 23	EU392532|MED23|9439|mediator complex subunit 23	BC060759|MED23|9439|mediator complex subunit 23	AF104255|MED23|9439|mediator complex subunit 23	AL136776|MED23|9439|mediator complex subunit 23	AB033042|MED23|9439|mediator complex subunit 23	BC007088|MED23|9439|mediator complex subunit 23	NM_004830|MED23|9439|mediator complex subunit 23	NM_015979|MED23|9439|mediator complex subunit 23
hg19_v1_chr17_-_43510279_43510295	0.0333036	SOX2.p2	BC067345|ARHGAP27|201176|Rho GTPase activating protein 27	NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr11_-_61560052_61560088	0.0331782	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg19_v1_chr9_-_98269686_98269714	0.0330613	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg19_v1_chr5_+_99871234_99871306	0.0330065	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr19_+_11708234_11708349	0.0329484	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg19_v1_chr1_+_203764750_203764798	0.0329129	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr17_-_72527512_72527574	0.0329044	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg19_v1_chr1_+_173684136_173684231	0.0328922	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chrX_+_99899388_99899402	0.0328708	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr10_+_5005453_5005576	0.0328145	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg19_v1_chr17_-_56609361_56609363	0.0327996	SOX2.p2	BC018055|SEPT4|5414|septin 4
hg19_v1_chr1_-_169555624_169555705	0.032769	SOX2.p2	AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)	M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)	M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)
hg19_v1_chr13_-_61989654_61989654	0.0327336	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg19_v1_chr15_-_43910959_43910997	0.0326211	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg19_v1_chr8_-_7274353_7274353	0.0325409	SOX2.p2	NM_001205266|DEFB4B|100289462|defensin, beta 4B
hg19_v1_chr2_+_61389628_61389628	0.0324346	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg19_v1_chr22_+_38597938_38598017	0.0323382	SOX2.p2	NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr19_-_41903226_41903372	0.032338	SOX2.p2	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg19_v1_chr1_+_32827797_32827861	0.0321356	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg19_v1_chr4_+_1902352_1902381	0.0318807	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr1_-_67519698_67519855	0.031875	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg19_v1_chr11_+_34460421_34460528	0.0316768	SOX2.p2	AK291585|CAT|847|catalase	NM_001752|CAT|847|catalase	BC110398|CAT|847|catalase	AK315350|CAT|847|catalase	X04076|CAT|847|catalase	BC112217|CAT|847|catalase	BC112219|CAT|847|catalase
hg19_v1_chr1_-_203155910_203155942	0.0315257	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr4_+_175204827_175204894	0.0314623	SOX2.p2	NM_001040157|CEP44|80817|centrosomal protein 44kDa
hg19_v1_chr15_+_69307033_69307070	0.0313513	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg19_v1_chr9_-_15510899_15511022	0.0313249	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg19_v1_chrX_+_77166178_77166208	0.0312395	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chrX_-_114468604_114468634	0.0310895	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg19_v1_chr1_+_2036154_2036154	0.0310553	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr4_-_155412867_155412947	0.0309583	SOX2.p2	AK127704|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr1_+_20208908_20208920	0.0309396	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr9_+_70971814_70971814	0.030908	SOX2.p2	BC033073|PGM5|5239|phosphoglucomutase 5	NM_021965|PGM5|5239|phosphoglucomutase 5
hg19_v1_chr2_-_87303105_87303560	0.0308634	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg19_v1_chr1_+_6845381_6845601	0.0307521	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg19_v1_chr22_+_44577256_44577256	0.0306782	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg19_v1_chr10_+_17271302_17271316	0.0305958	SOX2.p2	Z19554|VIM|7431|vimentin
hg19_v1_chr1_+_203764822_203764835	0.0304893	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr7_+_2598676_2598703	0.030476	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg19_v1_chr17_+_58677489_58677599	0.0304721	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v1_chr5_-_127873477_127873557	0.0304471	SOX2.p2	AK300440|FBN2|2201|fibrillin 2
hg19_v1_chr12_+_72057676_72057936	0.0304354	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr14_+_90863365_90863489	0.0303445	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr1_+_87794150_87794164	0.0301264	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg19_v1_chr1_-_177133950_177134023	0.0301069	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg19_v1_chr9_-_132597500_132597538	0.0300926	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr20_-_34330177_34330177	0.0299815	SOX2.p2	BX537770|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr20_+_55108265_55108301	0.0299625	SOX2.p2	BC014951|FAM209B|388799|family with sequence similarity 209, member B	NM_001013646|FAM209B|388799|family with sequence similarity 209, member B
hg19_v1_chr20_+_17206751_17206751	0.0299204	SOX2.p2	BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr15_-_73051650_73051778	0.0298766	SOX2.p2	
hg19_v1_chr7_+_142960588_142960614	0.029835	SOX2.p2	AK289570|GSTK1|373156|glutathione S-transferase kappa 1	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr14_-_21994342_21994483	0.0297843	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr5_+_178487332_178487606	0.0297836	SOX2.p2	BC063312|ZNF354C|30832|zinc finger protein 354C	AF525463|ZNF354C|30832|zinc finger protein 354C	NM_014594|ZNF354C|30832|zinc finger protein 354C
hg19_v1_chr2_+_173292344_173292614	0.029781	SOX2.p2	X53586|ITGA6|3655|integrin, alpha 6	BC136455|ITGA6|3655|integrin, alpha 6	BC136456|ITGA6|3655|integrin, alpha 6	X59512|ITGA6|3655|integrin, alpha 6	AB208842|ITGA6|3655|integrin, alpha 6
hg19_v1_chr19_-_42569921_42569956	0.0297507	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr2_-_133429069_133429151	0.0296556	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr7_-_16921596_16921612	0.0296022	SOX2.p2	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)
hg19_v1_chr8_-_133687761_133687894	0.0295778	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg19_v1_chr1_-_101360337_101360403	0.0295708	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr12_+_7080077_7080078	0.0294926	SOX2.p2	AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr18_+_67956242_67956280	0.0294802	SOX2.p2	BC020082|SOCS6|9306|suppressor of cytokine signaling 6
hg19_v1_chr15_-_60771118_60771430	0.0293454	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg19_v1_chr10_+_17271276_17271276	0.0292173	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg19_v1_chr1_-_226186987_226187017	0.0292166	SOX2.p2	BC016290|C1orf55|163859|chromosome 1 open reading frame 55
hg19_v1_chr2_-_26541916_26541969	0.0291911	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg19_v1_chr11_+_63753902_63753938	0.0291622	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr9_-_40792062_40792111	0.0290425	SOX2.p2	AK057375|ZNF658|26149|zinc finger protein 658	AK292150|ZNF658|26149|zinc finger protein 658	NM_033160|ZNF658|26149|zinc finger protein 658
hg19_v1_chr1_-_52343690_52343711	0.0290423	SOX2.p2	AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr11_-_1629614_1629692	0.0289836	SOX2.p2	AY597812|KRTAP5-3|387266|keratin associated protein 5-3	AB126072|KRTAP5-3|387266|keratin associated protein 5-3	NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3
hg19_v1_chrM_+_5769_6092	0.0289221	SOX2.p2	
hg19_v1_chr14_-_35344852_35344852	0.0288932	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr1_+_52521975_52522021	0.0288697	SOX2.p2	AK027582|BTF3L4|91408|basic transcription factor 3-like 4	BC022371|BTF3L4|91408|basic transcription factor 3-like 4	BC021004|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chrX_-_106960028_106960230	0.0288248	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chr3_+_109128836_109128836	0.0288103	SOX2.p2	AK058092|FLJ25363|401082|uncharacterized LOC401082	NM_001145553|FLJ25363|401082|uncharacterized LOC401082
hg19_v1_chr9_+_125376947_125377016	0.0288043	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg19_v1_chr10_-_75410778_75410799	0.0287339	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg19_v1_chr16_+_524843_524856	0.0287082	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg19_v1_chr15_-_56035176_56035277	0.0286817	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg19_v1_chr1_-_247494990_247495044	0.0285221	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg19_v1_chr7_+_150020548_150020604	0.028511	SOX2.p2	BC001354|LRRC61|65999|leucine rich repeat containing 61
hg19_v1_chr3_+_142342265_142342343	0.0285072	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr12_-_110906007_110906053	0.0284794	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr10_-_108924287_108924465	0.0284001	SOX2.p2	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg19_v1_chr12_-_56709656_56709772	0.0283005	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr1_-_76081693_76081799	0.0281552	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg19_v1_chr22_+_45072936_45073004	0.0281505	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg19_v1_chr21_+_41239346_41239408	0.0281101	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg19_v1_chr1_-_157567733_157567869	0.028067	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg19_v1_chr1_-_149889362_149889446	0.0280326	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr8_+_68864341_68864363	0.0279108	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr2_+_16080559_16080569	0.0279032	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr2_-_31637598_31637624	0.0278275	SOX2.p2	NM_000379|XDH|7498|xanthine dehydrogenase
hg19_v1_chr17_+_59477473_59477519	0.0277547	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr2_-_86116016_86116156	0.0277192	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chrY_+_1664347_1664347	0.0276759	SOX2.p2	NM_004043|ASMT|438|acetylserotonin O-methyltransferase	U11090|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr5_-_137090033_137090036	0.0276741	SOX2.p2	BC018800|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr15_+_85427891_85427931	0.0275698	SOX2.p2	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
hg19_v1_chr6_-_166582129_166582130	0.0275635	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg19_v1_chr9_-_125590809_125590934	0.0275225	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr5_+_140207562_140207676	0.0274803	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg19_v1_chr3_+_30648372_30648435	0.0274391	SOX2.p2	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg19_v1_chr15_-_74494780_74494825	0.0273721	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr17_-_46671322_46671412	0.0273496	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg19_v1_chr19_-_5340700_5340889	0.0273183	SOX2.p2	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S
hg19_v1_chr11_+_65339819_65340044	0.0273017	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B
hg19_v1_chr5_+_99871023_99871123	0.0272758	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr17_-_5026396_5026412	0.0271882	SOX2.p2	NM_014519|ZNF232|7775|zinc finger protein 232	AK316369|ZNF232|7775|zinc finger protein 232
hg19_v1_chr6_-_2842069_2842096	0.0271511	SOX2.p2	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg19_v1_chr11_+_57529233_57529445	0.027124	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chr12_+_66583029_66583078	0.0270893	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr1_+_225997804_225997851	0.0270811	SOX2.p2	U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr19_-_20844312_20844412	0.0269942	SOX2.p2	AK096221|ZNF626|199777|zinc finger protein 626	CR749233|ZNF626|199777|zinc finger protein 626	BC007116|ZNF626|199777|zinc finger protein 626	BX648764|ZNF626|199777|zinc finger protein 626	BC107803|ZNF626|199777|zinc finger protein 626	NM_001076675|ZNF626|199777|zinc finger protein 626	NM_145297|ZNF626|199777|zinc finger protein 626
hg19_v1_chr11_+_112046207_112046478	0.0269642	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg19_v1_chr1_-_235491494_235491531	0.0269574	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr1_+_20208837_20208891	0.0269508	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr18_+_77905804_77905931	0.0268705	SOX2.p2	AK056304|LOC100130522|100130522|uncharacterized LOC100130522
hg19_v1_chrX_+_119384685_119384696	0.0267594	SOX2.p2	
hg19_v1_chr17_+_42299282_42299409	0.0267284	SOX2.p2	
hg19_v1_chr1_+_27101217_27101360	0.0266758	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr1_-_52344010_52344058	0.026645	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr4_-_190948396_190948411	0.0265136	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	NM_001005217|FRG2|448831|FSHD region gene 2	NM_001199232|LOC100288255|100288255|FSHD region gene 2-like
hg19_v1_chr14_-_60097531_60097536	0.0264779	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr1_-_153085963_153085988	0.0264509	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg19_v1_chr6_-_108279320_108279347	0.0263915	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr2_+_204192915_204193355	0.0262878	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg19_v1_chr2_+_219646704_219647079	0.0262321	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr17_+_37784750_37784773	0.0262288	SOX2.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg19_v1_chr7_+_123295860_123296015	0.0262233	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg19_v1_chr19_-_56988698_56988769	0.0260045	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr6_-_31745048_31745107	0.0259928	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg19_v1_chr2_+_54683276_54683948	0.0259517	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg19_v1_chr14_+_77292714_77292876	0.0258367	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg19_v1_chr6_-_47253962_47254003	0.0257879	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_-_168105902_168105938	0.0257477	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr20_-_43024303_43024345	0.0257398	SOX2.p2	
hg19_v1_chr19_+_4402658_4402775	0.0256986	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chr14_-_20922969_20923022	0.0256222	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr11_-_40315663_40315663	0.0255942	SOX2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg19_v1_chr14_+_24540742_24540797	0.0255869	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg19_v1_chr10_+_69644341_69644474	0.0255506	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg19_v1_chr3_+_14444083_14444149	0.0254654	SOX2.p2	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr12_-_57634474_57634526	0.0252983	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v1_chr2_-_219906237_219906248	0.0252776	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg19_v1_chr20_-_34330093_34330176	0.0252085	SOX2.p2	BC008204|RBM39|9584|RNA binding motif protein 39	U92990|RBM39|9584|RNA binding motif protein 39	BC141835|RBM39|9584|RNA binding motif protein 39	BC158172|RBM39|9584|RNA binding motif protein 39	AK303910|RBM39|9584|RNA binding motif protein 39	AL833168|RBM39|9584|RNA binding motif protein 39	AK299165|RBM39|9584|RNA binding motif protein 39	CR749443|RBM39|9584|RNA binding motif protein 39	AK299678|RBM39|9584|RNA binding motif protein 39	BX640714|RBM39|9584|RNA binding motif protein 39	BX640812|RBM39|9584|RNA binding motif protein 39
hg19_v1_chr3_-_47205413_47205466	0.025154	SOX2.p2	AK131371|SETD2|29072|SET domain containing 2	NM_014159|SETD2|29072|SET domain containing 2
hg19_v1_chr7_+_100209941_100210203	0.0251287	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr9_-_88969323_88969424	0.0250292	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr13_+_31774122_31774298	0.0249755	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr3_-_116164321_116164341	0.0248974	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr14_-_54908035_54908197	0.0248671	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr2_-_169746921_169746962	0.024838	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr15_+_40886442_40886486	0.0247475	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr5_+_140792507_140792742	0.0247266	SOX2.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chrX_+_46404927_46404962	0.0246695	SOX2.p2	BC034616|LOC401588|401588|uncharacterized LOC401588	AK056314|LOC401588|401588|uncharacterized LOC401588
hg19_v1_chr11_-_790103_790125	0.0246596	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr11_+_126081618_126081707	0.0246481	SOX2.p2	NM_024556|FAM118B|79607|family with sequence similarity 118, member B	AK315615|FAM118B|79607|family with sequence similarity 118, member B	AK024756|FAM118B|79607|family with sequence similarity 118, member B	AK225081|FAM118B|79607|family with sequence similarity 118, member B	BC001647|FAM118B|79607|family with sequence similarity 118, member B
hg19_v1_chr8_-_105601124_105601226	0.0246171	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chrX_-_72299224_72299350	0.0244597	SOX2.p2	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A
hg19_v1_chr6_-_108279307_108279318	0.0244533	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr6_-_34101272_34101532	0.0243644	SOX2.p2	EU432124|GRM4|2914|glutamate receptor, metabotropic 4	HQ258665|GRM4|2914|glutamate receptor, metabotropic 4	HQ258669|GRM4|2914|glutamate receptor, metabotropic 4	U92457|GRM4|2914|glutamate receptor, metabotropic 4	BC130526|GRM4|2914|glutamate receptor, metabotropic 4	BC130528|GRM4|2914|glutamate receptor, metabotropic 4	BC144057|GRM4|2914|glutamate receptor, metabotropic 4	NM_000841|GRM4|2914|glutamate receptor, metabotropic 4	X80818|GRM4|2914|glutamate receptor, metabotropic 4
hg19_v1_chr10_-_98325100_98325183	0.0243253	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr11_+_34073188_34073238	0.0243138	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg19_v1_chr14_+_50360359_50360454	0.0242344	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg19_v1_chr2_+_190649109_190649291	0.0242276	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr9_-_115774471_115774471	0.0241308	SOX2.p2	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg19_v1_chr1_-_162381805_162381927	0.0241146	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg19_v1_chr9_-_91793375_91793554	0.0239536	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr15_-_57210672_57210801	0.0239411	SOX2.p2	AK096657|LOC145783|145783|uncharacterized LOC145783
hg19_v1_chr15_+_99192696_99192816	0.0238985	SOX2.p2	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg19_v1_chr5_-_176900591_176900650	0.0237696	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg19_v1_chr16_-_58663727_58663731	0.0237373	SOX2.p2	BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr19_+_41770273_41770281	0.0237315	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr19_+_41903693_41903716	0.0236792	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr1_-_153895450_153895452	0.0236543	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg19_v1_chr19_+_9938587_9938639	0.0236371	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg19_v1_chr1_+_201709051_201709079	0.0236069	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg19_v1_chr10_+_70980058_70980104	0.0235673	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg19_v1_chr5_+_137688386_137688484	0.0235543	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr11_-_27723061_27723179	0.0235409	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr6_+_167525294_167525294	0.0235337	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chrX_+_70315637_70316378	0.0235219	SOX2.p2	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg19_v1_chr7_+_20686965_20687217	0.0234723	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v1_chr1_-_224033603_224033644	0.023469	SOX2.p2	BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2	AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2	U58334|TP53BP2|7159|tumor protein p53 binding protein, 2	BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2
hg19_v1_chr14_+_23842017_23842327	0.0234423	SOX2.p2	AF461739|IL25|64806|interleukin 25	NM_172314|IL25|64806|interleukin 25	AF305200|IL25|64806|interleukin 25	AY359127|IL25|64806|interleukin 25	NM_022789|IL25|64806|interleukin 25	BC104929|IL25|64806|interleukin 25	BC104931|IL25|64806|interleukin 25	AF458059|IL25|64806|interleukin 25	BC069565|IL25|64806|interleukin 25	EU831823|IL25|64806|interleukin 25	EU831900|IL25|64806|interleukin 25
hg19_v1_chr1_+_242012032_242012139	0.0234408	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr3_-_99833348_99833356	0.0234101	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr13_-_50699775_50699855	0.0233783	SOX2.p2	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)
hg19_v1_chr12_+_7080081_7080186	0.0233439	SOX2.p2	AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr2_+_37311593_37311702	0.023309	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg19_v1_chr9_-_132586363_132586397	0.0232887	SOX2.p2	BT006931|TOR1A|1861|torsin family 1, member A (torsin A)	DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)	DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)	BC014484|TOR1A|1861|torsin family 1, member A (torsin A)	AK314505|TOR1A|1861|torsin family 1, member A (torsin A)	AK075343|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr16_+_57769626_57769665	0.0231948	SOX2.p2	NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr6_+_42982013_42982022	0.0230975	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr21_-_35288027_35288157	0.0230668	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v1_chr1_+_231664398_231664465	0.0230513	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg19_v1_chr5_+_175969511_175969511	0.0229832	SOX2.p2	AK315055|CDHR2|54825|cadherin-related family member 2	NM_001171976|CDHR2|54825|cadherin-related family member 2
hg19_v1_chr1_+_159409511_159409548	0.0229541	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg19_v1_chr8_+_26435920_26435934	0.0229314	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr3_+_127634317_127634319	0.0228208	SOX2.p2	AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg19_v1_chr12_-_110906056_110906088	0.0227641	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr9_-_99329092_99329202	0.0226846	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg19_v1_chr13_-_48877796_48877822	0.0226505	SOX2.p2	
hg19_v1_chr18_+_11751470_11751561	0.0226447	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chrX_+_17653412_17653412	0.0226369	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v1_chr5_+_139175385_139175428	0.0225965	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg19_v1_chr11_-_75236418_75236598	0.0224135	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg19_v1_chr5_-_11904127_11904242	0.0223895	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr20_-_43977023_43977087	0.022386	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg19_v1_chr3_+_126911973_126912016	0.022354	SOX2.p2	AK097460|C3orf56|285311|chromosome 3 open reading frame 56	BC137154|C3orf56|285311|chromosome 3 open reading frame 56	BC137155|C3orf56|285311|chromosome 3 open reading frame 56
hg19_v1_chr13_-_52733669_52733784	0.0223463	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr16_-_46782104_46782220	0.0223452	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg19_v1_chr12_-_48152860_48152888	0.0223153	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr8_-_22785228_22785420	0.022301	SOX2.p2	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4	BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4	NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4
hg19_v1_chr1_+_53527723_53527759	0.0222948	SOX2.p2	NM_001199080|PODN|127435|podocan	NM_001199082|PODN|127435|podocan	NM_153703|PODN|127435|podocan
hg19_v1_chr20_+_35201948_35202055	0.0222784	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg19_v1_chr8_+_19796581_19796723	0.022227	SOX2.p2	NM_000237|LPL|4023|lipoprotein lipase	S78266|LPL|4023|lipoprotein lipase
hg19_v1_chr11_-_66313474_66313501	0.0221497	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg19_v1_chr13_-_29292961_29293149	0.0220795	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg19_v1_chr17_+_42264582_42264653	0.0219574	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr17_+_75369372_75369479	0.0219065	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg19_v1_chr16_-_72206348_72206348	0.0218559	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr13_-_53024730_53024805	0.0218539	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v1_chr15_+_68346655_68346667	0.0218374	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg19_v1_chr17_+_30677187_30677304	0.0217774	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg19_v1_chr7_-_105516923_105517047	0.0217374	SOX2.p2	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg19_v1_chr2_+_219646448_219646500	0.0217359	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr7_+_11013453_11013567	0.0217293	SOX2.p2	AK294419|PHF14|9678|PHD finger protein 14	NM_014660|PHF14|9678|PHD finger protein 14	AK295461|PHF14|9678|PHD finger protein 14	AB018326|PHF14|9678|PHD finger protein 14	BC152414|PHF14|9678|PHD finger protein 14
hg19_v1_chr1_+_45266048_45266216	0.0216837	SOX2.p2	AB209875|PLK3|1263|polo-like kinase 3	EU832631|PLK3|1263|polo-like kinase 3	EU832706|PLK3|1263|polo-like kinase 3	BC004135|PLK3|1263|polo-like kinase 3	BC004198|PLK3|1263|polo-like kinase 3	BC013960|PLK3|1263|polo-like kinase 3	U56998|PLK3|1263|polo-like kinase 3
hg19_v1_chr6_+_42981986_42981992	0.0216836	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr1_-_79472360_79472494	0.0216646	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v1_chr7_-_150020661_150020757	0.0215497	SOX2.p2	BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)	NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)
hg19_v1_chr20_+_57556295_57556319	0.0214839	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr7_+_116660263_116660272	0.0214029	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr10_-_127408000_127408068	0.0213404	SOX2.p2	AK094354|FLJ37035|399821|uncharacterized LOC399821
hg19_v1_chrY_+_24454994_24455056	0.0213376	SOX2.p2	BC047768|RBMY1A1|5940|RNA binding motif protein, Y-linked, family 1, member A1	BC026077|RBMY2FP|159162|RNA binding motif protein, Y-linked, family 2, member F pseudogene	BC030018|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	NM_152585|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	X76060|RBMY1F|159163|RNA binding motif protein, Y-linked, family 1, member F	BC144577|RBMY1B|378948|RNA binding motif protein, Y-linked, family 1, member B	BC146853|RBMY1A1|5940|RNA binding motif protein, Y-linked, family 1, member A1
hg19_v1_chr1_-_205719273_205719308	0.0212823	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr19_+_13080431_13080474	0.0211959	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5	HQ258091|DAND5|199699|DAN domain family, member 5
hg19_v1_chr16_+_58498216_58498308	0.0211886	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr20_-_3388219_3388285	0.0211497	SOX2.p2	NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194
hg19_v1_chr5_+_140800536_140800602	0.0209766	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr6_-_146056896_146057158	0.0209681	SOX2.p2	AF284580|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_001018041|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_005670|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AF454491|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AK299497|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
hg19_v1_chr1_+_28844647_28844759	0.0209583	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr12_+_49741040_49741040	0.0209206	SOX2.p2	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22	NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22
hg19_v1_chr2_-_133427624_133427783	0.0208829	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr3_+_52813936_52813941	0.0208496	SOX2.p2	AK303156|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	NM_001166435|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	AK303110|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	NM_001166436|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1
hg19_v1_chr1_-_217113007_217113016	0.0208413	SOX2.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr3_+_38347426_38347517	0.020822	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14	HQ258465|SLC22A14|9389|solute carrier family 22, member 14
hg19_v1_chr15_-_82824842_82824944	0.0208168	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	NM_001199057|RPS17L|100505503|ribosomal protein S17-like	BC062715|RPS17|6218|ribosomal protein S17
hg19_v1_chr3_-_184971815_184971885	0.0208109	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg19_v1_chr7_+_44836273_44836301	0.0207637	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr21_+_38791206_38791206	0.0207448	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chr22_+_29664216_29664339	0.0207132	SOX2.p2	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg19_v1_chr3_+_127771307_127771337	0.0206643	SOX2.p2	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr5_+_76382458_76382591	0.0206005	SOX2.p2	AK311179|LOC728723|728723|uncharacterized LOC728723
hg19_v1_chr14_-_74180341_74181182	0.0205523	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg19_v1_chr22_-_17640076_17640152	0.0205206	SOX2.p2	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr15_+_41625152_41625179	0.0204979	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg19_v1_chr7_+_44836309_44836323	0.0204748	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr15_-_65477645_65477727	0.0204705	SOX2.p2	AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr15_-_26108236_26108471	0.0204326	SOX2.p2	EU831492|ATP10A|57194|ATPase, class V, type 10A	EU831579|ATP10A|57194|ATPase, class V, type 10A	NM_024490|ATP10A|57194|ATPase, class V, type 10A	BC052251|ATP10A|57194|ATPase, class V, type 10A
hg19_v1_chr19_+_36139221_36139228	0.0204079	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr2_-_38829973_38830012	0.0202325	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr10_+_70748476_70748594	0.0202184	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr17_-_79828691_79828789	0.0202045	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr17_-_79829237_79829260	0.020146	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr3_+_127771342_127771391	0.0201274	SOX2.p2	
hg19_v1_chr1_+_225997742_225997802	0.0201034	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr2_+_86947570_86947789	0.0200533	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr15_-_35087748_35087926	0.0199528	SOX2.p2	AK129892|ACTC1|70|actin, alpha, cardiac muscle 1	AK056592|ACTC1|70|actin, alpha, cardiac muscle 1	AK129902|ACTC1|70|actin, alpha, cardiac muscle 1	AK290616|ACTC1|70|actin, alpha, cardiac muscle 1	BC009978|ACTC1|70|actin, alpha, cardiac muscle 1	NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1
hg19_v1_chr7_-_64451413_64451413	0.0199153	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg19_v1_chr13_+_31774087_31774119	0.0198692	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr5_-_40835283_40835323	0.0198311	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg19_v1_chr14_+_20923705_20923804	0.0197695	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr3_-_119278402_119278480	0.0197018	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg19_v1_chr4_-_175204617_175204851	0.019672	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg19_v1_chr22_-_31742217_31742314	0.0196525	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr1_+_200993041_200993134	0.0194894	SOX2.p2	
hg19_v1_chr21_+_17102370_17102712	0.0194438	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chrX_-_15872938_15872938	0.0193912	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr9_-_91267004_91267074	0.0193698	SOX2.p2	BC101432|LOC286238|286238|uncharacterized LOC286238	BC101439|LOC286238|286238|uncharacterized LOC286238	BC101440|LOC286238|286238|uncharacterized LOC286238	BC101442|LOC286238|286238|uncharacterized LOC286238	AK098532|LOC286238|286238|uncharacterized LOC286238	NM_001100111|LOC286238|286238|uncharacterized LOC286238
hg19_v1_chr6_-_127664448_127664503	0.0192883	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr3_+_48956244_48956268	0.0192243	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr3_-_48229328_48229528	0.0191816	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg19_v1_chr12_-_56709831_56710127	0.0191155	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr1_+_23695441_23695549	0.0190783	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg19_v1_chr9_-_32552573_32552632	0.0189668	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr8_+_143545376_143545376	0.0188862	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg19_v1_chr1_+_53925071_53925144	0.0188815	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr4_+_106068009_106068079	0.0188011	SOX2.p2	AK055149|TET2|54790|tet methylcytosine dioxygenase 2	BC150180|TET2|54790|tet methylcytosine dioxygenase 2	BC150201|TET2|54790|tet methylcytosine dioxygenase 2
hg19_v1_chr1_-_203155813_203155825	0.0188001	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr20_+_21106623_21106706	0.0186781	SOX2.p2	NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1	AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1	BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1	AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1
hg19_v1_chr20_+_57556322_57556377	0.0186517	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr12_-_21810754_21810766	0.018611	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr3_-_128712918_128712985	0.0185827	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg19_v1_chr4_-_17783134_17783134	0.0185307	SOX2.p2	AK308144|FAM184B|27146|family with sequence similarity 184, member B	NM_015688|FAM184B|27146|family with sequence similarity 184, member B
hg19_v1_chr22_+_25615611_25615611	0.0184641	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg19_v1_chr17_+_26794838_26794968	0.0183731	SOX2.p2	
hg19_v1_chr3_-_93781659_93781830	0.018329	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr6_+_142468382_142468399	0.0183099	SOX2.p2	AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr18_-_24722757_24723001	0.0183021	SOX2.p2	AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
hg19_v1_chr10_-_64576123_64576171	0.0182831	SOX2.p2	NM_000399|EGR2|1959|early growth response 2	NM_001136177|EGR2|1959|early growth response 2	NM_001136179|EGR2|1959|early growth response 2
hg19_v1_chr19_-_6279797_6279809	0.0182796	SOX2.p2	
hg19_v1_chr4_-_24586015_24586137	0.0182749	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr1_-_143767849_143767880	0.0182578	SOX2.p2	HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg19_v1_chr14_+_24521099_24521253	0.0182577	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chrX_-_119603136_119603154	0.0182097	SOX2.p2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr6_+_42531767_42531787	0.0181987	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr6_+_42981975_42981984	0.018158	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr1_+_22328148_22328166	0.0181496	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg19_v1_chr3_-_109035239_109035363	0.0181471	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg19_v1_chr6_+_142468415_142468430	0.0180227	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr19_-_20748540_20748630	0.0179797	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg19_v1_chr16_+_67876211_67876219	0.0179516	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg19_v1_chr15_-_80216004_80216072	0.017888	SOX2.p2	AF249277|ST20|400410|suppressor of tumorigenicity 20
hg19_v1_chrX_+_102611379_102611462	0.0178358	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr1_+_36348795_36348812	0.0177827	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr14_+_20923364_20923443	0.0177265	SOX2.p2	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr1_-_173991506_173991524	0.0176165	SOX2.p2	
hg19_v1_chr4_+_159690176_159690181	0.0176155	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg19_v1_chr2_-_203776948_203776948	0.0175786	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chr1_-_241799101_241799231	0.0175767	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr7_-_143059144_143059172	0.0175665	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr6_+_72892371_72892454	0.0175561	SOX2.p2	AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr7_-_27196163_27196328	0.0174339	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg19_v1_chr5_-_54603401_54603522	0.0173795	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg19_v1_chr12_-_57119310_57119327	0.0173344	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg19_v1_chr5_+_150400132_150400214	0.0173339	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg19_v1_chr17_+_66031885_66031892	0.0172738	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr19_+_58361219_58361406	0.0172613	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg19_v1_chr12_-_21810733_21810752	0.0171615	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr19_+_9732136_9732217	0.0171535	SOX2.p2	NM_001242812|LOC284385|284385|uncharacterized LOC284385	AK097685|LOC284385|284385|uncharacterized LOC284385	BC143540|LOC284385|284385|uncharacterized LOC284385
hg19_v1_chr6_+_42982002_42982011	0.017143	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr4_-_54930771_54930824	0.0171026	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr19_+_35417806_35417951	0.0170413	SOX2.p2	NM_001099437|ZNF30|90075|zinc finger protein 30	NM_001099438|ZNF30|90075|zinc finger protein 30	NM_194325|ZNF30|90075|zinc finger protein 30	BC142996|ZNF30|90075|zinc finger protein 30	BX640666|ZNF30|90075|zinc finger protein 30	AK295515|ZNF30|90075|zinc finger protein 30	AK290435|ZNF30|90075|zinc finger protein 30
hg19_v1_chr6_-_38670882_38670902	0.0170211	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I
hg19_v1_chr11_+_3829765_3829783	0.0170207	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2
hg19_v1_chr6_+_43149905_43149924	0.0169537	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg19_v1_chr12_-_21810720_21810732	0.0169336	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr14_-_69619870_69619960	0.0168884	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg19_v1_chr9_-_35828728_35828743	0.0168778	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg19_v1_chr1_+_115572414_115572414	0.0168584	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg19_v1_chr19_+_58545399_58545473	0.0168461	SOX2.p2	BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1	NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1	BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1
hg19_v1_chr12_+_58120029_58120108	0.0168091	SOX2.p2	AK301303|LOC100130776|100130776|uncharacterized LOC100130776	BC069024|LOC100130776|100130776|uncharacterized LOC100130776	BC039697|LOC100130776|100130776|uncharacterized LOC100130776	BC019026|LOC100130776|100130776|uncharacterized LOC100130776
hg19_v1_chr10_-_64576074_64576121	0.0167765	SOX2.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg19_v1_chr6_-_30585016_30585022	0.016701	SOX2.p2	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chr13_+_96085852_96085857	0.0166767	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr5_-_36001126_36001129	0.0166468	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg19_v1_chr17_+_7487153_7487180	0.016618	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr1_-_205719129_205719156	0.0165983	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chrX_+_79675945_79675979	0.0165121	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg19_v1_chr3_+_160394946_160394964	0.0164171	SOX2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg19_v1_chr2_+_119699744_119699897	0.016407	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure
hg19_v1_chr12_+_133707212_133707213	0.0164002	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg19_v1_chr1_-_115300615_115300670	0.0163432	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chrX_-_38079980_38080271	0.0163311	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg19_v1_chr22_-_17640153_17640167	0.0163252	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr12_+_110562139_110562303	0.0162996	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg19_v1_chr7_+_93535819_93535819	0.0162875	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v1_chr22_-_39151457_39151472	0.0162447	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2	NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2
hg19_v1_chr5_-_40835325_40835386	0.0162294	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg19_v1_chr3_-_160167600_160167647	0.0162275	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg19_v1_chr1_+_151032866_151032873	0.016178	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr16_-_72206023_72206063	0.0160569	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr6_+_27775898_27775985	0.0160292	SOX2.p2	BC112254|HIST1H2AI|8329|histone cluster 1, H2ai	BC112256|HIST1H2AI|8329|histone cluster 1, H2ai	AK311766|HIST1H2AI|8329|histone cluster 1, H2ai	BC062305|HIST1H3F|8968|histone cluster 1, H3f	NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai	HQ258047|HIST1H2AM|8336|histone cluster 1, H2am
hg19_v1_chr9_+_117349993_117350083	0.0159992	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v1_chr16_-_75272524_75272557	0.0159422	SOX2.p2	AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr12_-_117742856_117742856	0.0157734	SOX2.p2	NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg19_v1_chr9_-_86322593_86322607	0.0157561	SOX2.p2	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg19_v1_chr1_-_200379072_200379162	0.0157399	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr1_-_26232890_26232992	0.0157188	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr19_-_42463437_42463499	0.0156612	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr13_+_99852678_99852678	0.015637	SOX2.p2	AK290342|UBAC2|337867|UBA domain containing 2	NM_001144072|UBAC2|337867|UBA domain containing 2
hg19_v1_chr5_-_41071404_41071443	0.0156109	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg19_v1_chr19_+_36139124_36139210	0.0155909	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr3_-_64672285_64672305	0.0155637	SOX2.p2	AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg19_v1_chr17_-_29641068_29641074	0.0154859	SOX2.p2	AK312822|EVI2B|2124|ecotropic viral integration site 2B
hg19_v1_chrX_+_57618440_57618481	0.0154799	SOX2.p2	AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B
hg19_v1_chr6_+_21593963_21594781	0.0154738	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr1_-_177133818_177133833	0.0154401	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg19_v1_chr6_-_47277640_47277640	0.0153832	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chrX_+_133507299_133507455	0.0153739	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg19_v1_chr19_-_42463500_42463541	0.0152969	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr11_+_44117746_44117772	0.0152913	SOX2.p2	NM_000401|EXT2|2132|exostosin 2	BX648142|EXT2|2132|exostosin 2
hg19_v1_chr21_-_46293598_46293608	0.0152912	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg19_v1_chr19_+_4007690_4007768	0.0152713	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg19_v1_chr6_+_42981840_42981954	0.0152546	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr21_-_40720938_40721003	0.015238	SOX2.p2	BC071643|HMGN1|3150|high mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr11_-_17498419_17498454	0.0151895	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr15_-_73925658_73925795	0.0151829	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chr2_-_27531113_27531129	0.0151776	SOX2.p2	BC104470|UCN|7349|urocortin	BC104471|UCN|7349|urocortin	NM_003353|UCN|7349|urocortin
hg19_v1_chr17_-_35969401_35969500	0.0151677	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg19_v1_chr17_-_74099603_74099845	0.0151397	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg19_v1_chr6_+_42982027_42982066	0.0151165	SOX2.p2	BC001793|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr15_+_69745156_69745287	0.0151021	SOX2.p2	NM_001003|RPLP1|6176|ribosomal protein, large, P1	NM_213725|RPLP1|6176|ribosomal protein, large, P1	AK130958|RPLP1|6176|ribosomal protein, large, P1	AK026579|RPLP1|6176|ribosomal protein, large, P1	D28366|RPLP1|6176|ribosomal protein, large, P1	M17886|RPLP1|6176|ribosomal protein, large, P1	AY303789|RPLP1|6176|ribosomal protein, large, P1	BC003369|RPLP1|6176|ribosomal protein, large, P1	BC007590|RPLP1|6176|ribosomal protein, large, P1	CR450339|RPLP1|6176|ribosomal protein, large, P1	CR542209|RPLP1|6176|ribosomal protein, large, P1
hg19_v1_chrX_-_16888462_16888533	0.01505	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr10_+_26505235_26505235	0.0150162	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v1_chr11_-_2925174_2925174	0.0149873	SOX2.p2	NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense
hg19_v1_chr4_-_84376943_84377024	0.01498	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg19_v1_chr7_+_129008044_129008133	0.0149706	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr20_-_34542385_34542547	0.0149393	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr6_-_89673270_89673346	0.01479	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr18_+_21269404_21269424	0.0147761	SOX2.p2	AK096422|LAMA3|3909|laminin, alpha 3
hg19_v1_chr5_+_134209909_134210195	0.0147707	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg19_v1_chr2_+_17935379_17935443	0.0147627	SOX2.p2	CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)
hg19_v1_chr2_+_196521851_196521965	0.0147614	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr14_+_50234907_50234935	0.0147578	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr6_-_38670871_38670880	0.0147559	SOX2.p2	BC015934|GLO1|2739|glyoxalase I
hg19_v1_chr6_+_142468401_142468411	0.0147476	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr22_-_17640168_17640190	0.0146468	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr1_-_1510260_1510284	0.014646	SOX2.p2	NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
hg19_v1_chr6_-_99797530_99797530	0.0145963	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg19_v1_chr3_+_23986735_23986895	0.0145683	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg19_v1_chr10_-_69991854_69991869	0.0145358	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)
hg19_v1_chr6_+_121756744_121756906	0.0145074	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chrX_-_74743085_74743152	0.014499	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr6_+_42981955_42981958	0.0143722	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr11_+_125496123_125496336	0.0142507	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chrX_+_70752911_70752940	0.0142175	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chr16_+_58283819_58283918	0.0142128	SOX2.p2	AK299066|CCDC113|29070|coiled-coil domain containing 113	NM_001142302|CCDC113|29070|coiled-coil domain containing 113	NM_014157|CCDC113|29070|coiled-coil domain containing 113	AK314300|CCDC113|29070|coiled-coil domain containing 113	AL136785|CCDC113|29070|coiled-coil domain containing 113	BC126445|CCDC113|29070|coiled-coil domain containing 113	BC126447|CCDC113|29070|coiled-coil domain containing 113	AF161550|CCDC113|29070|coiled-coil domain containing 113	AM392831|CCDC113|29070|coiled-coil domain containing 113	CR533506|CCDC113|29070|coiled-coil domain containing 113	HQ258203|CCDC113|29070|coiled-coil domain containing 113
hg19_v1_chr22_-_51016343_51016505	0.0142048	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg19_v1_chr2_+_201936461_201936756	0.0141294	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v1_chr9_+_40700290_40700290	0.0140965	SOX2.p2	NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3
hg19_v1_chr2_+_70314983_70315013	0.0140914	SOX2.p2	
hg19_v1_chr10_-_88730928_88731067	0.0140293	SOX2.p2	AK128041|LOC100133190|100133190|uncharacterized LOC100133190
hg19_v1_chr17_+_65373574_65373603	0.0139944	SOX2.p2	AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr10_-_28591844_28592020	0.0139746	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v1_chr12_-_21810769_21810778	0.0139569	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr7_+_2598712_2598782	0.0139035	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg19_v1_chr9_+_39355665_39355706	0.0138995	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr14_-_21852424_21852424	0.0138679	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr17_-_29641087_29641092	0.0138109	SOX2.p2	BC005926|EVI2B|2124|ecotropic viral integration site 2B
hg19_v1_chr11_-_77348758_77348871	0.0137877	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg19_v1_chr17_+_79981187_79981279	0.0137847	SOX2.p2	BC014109|LRRC45|201255|leucine rich repeat containing 45	NM_144999|LRRC45|201255|leucine rich repeat containing 45
hg19_v1_chr6_-_13711952_13711996	0.0136854	SOX2.p2	BC052781|RANBP9|10048|RAN binding protein 9
hg19_v1_chr5_-_82373253_82373271	0.0136612	SOX2.p2	NM_174909|TMEM167A|153339|transmembrane protein 167A
hg19_v1_chr1_-_58716173_58716192	0.0136244	SOX2.p2	CR933698|DAB1|1600|disabled homolog 1 (Drosophila)	AB210012|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr2_+_241375030_241375131	0.0135414	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg19_v1_chr16_+_28858009_28858064	0.0133543	SOX2.p2	AK055104|SH2B1|25970|SH2B adaptor protein 1
hg19_v1_chr6_-_127664691_127664753	0.0132625	SOX2.p2	AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1	BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1	AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr20_-_56286540_56286540	0.0132521	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg19_v1_chr7_-_93633527_93633702	0.0131475	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg19_v1_chr4_+_30722445_30722474	0.0131272	SOX2.p2	AB006756|PCDH7|5099|protocadherin 7
hg19_v1_chr16_-_18573334_18573449	0.0131268	SOX2.p2	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg19_v1_chr1_-_176176113_176176217	0.0131041	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr19_+_9473695_9473695	0.0131018	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chrY_-_2368579_2368579	0.0130183	SOX2.p2	BC015030|ZBED1|9189|zinc finger, BED-type containing 1	NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1
hg19_v1_chr5_+_180650274_180650289	0.012977	SOX2.p2	AK027601|TRIM41|90933|tripartite motif containing 41	AX775793|TRIM41|90933|tripartite motif containing 41	AX775799|TRIM41|90933|tripartite motif containing 41	AX775801|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr17_-_61819120_61819163	0.0129644	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr17_+_42148097_42148302	0.0128758	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg19_v1_chr19_+_9434854_9435016	0.0128616	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	NM_001202412|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough
hg19_v1_chrX_-_15872882_15872891	0.0127959	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr4_-_46995440_46995553	0.012743	SOX2.p2	DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v1_chr6_+_42982221_42982242	0.0126541	SOX2.p2	NM_001242872|KLHDC3|116138|kelch domain containing 3	AK302336|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr19_-_44143943_44144031	0.0126057	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg19_v1_chr9_+_125703111_125703346	0.012599	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg19_v1_chrX_+_99899162_99899303	0.0125841	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr2_+_70314696_70314711	0.0124017	SOX2.p2	U24223|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr10_-_123734641_123734702	0.0123422	SOX2.p2	
hg19_v1_chr3_+_100211554_100211612	0.0123202	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chr8_+_80523339_80523339	0.0122686	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg19_v1_chr17_-_79479780_79479830	0.0122355	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1
hg19_v1_chr17_+_7184978_7185253	0.0120534	SOX2.p2	AK313372|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC034387|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	NM_001042|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	M20747|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC069615|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC069621|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC113592|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC126164|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	HQ258267|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v1_chrX_+_153237990_153237990	0.0119785	SOX2.p2	NM_003492|TMEM187|8269|transmembrane protein 187
hg19_v1_chr10_-_123734708_123734812	0.0119584	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg19_v1_chrX_-_100306859_100306919	0.0119152	SOX2.p2	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v1_chr2_-_178128527_178128616	0.0118807	SOX2.p2	AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg19_v1_chr8_-_33424642_33424684	0.0118594	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg19_v1_chr6_-_89673127_89673255	0.0118146	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr11_+_44117098_44117251	0.0117963	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg19_v1_chr7_-_73256838_73256886	0.0117097	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg19_v1_chr19_+_41257086_41257312	0.0116841	SOX2.p2	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr19_-_6767417_6767598	0.0116441	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg19_v1_chr16_-_48419148_48419357	0.011625	SOX2.p2	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg19_v1_chrX_-_16888175_16888436	0.0115897	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr13_-_26795927_26796027	0.0115877	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr1_-_203155867_203155909	0.0115423	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chrX_-_71792897_71792952	0.0115393	SOX2.p2	AK074326|HDAC8|55869|histone deacetylase 8	AK296641|HDAC8|55869|histone deacetylase 8	NM_001166418|HDAC8|55869|histone deacetylase 8	NM_001166419|HDAC8|55869|histone deacetylase 8	NM_001166420|HDAC8|55869|histone deacetylase 8	NM_001166422|HDAC8|55869|histone deacetylase 8	NM_001166448|HDAC8|55869|histone deacetylase 8	NM_018486|HDAC8|55869|histone deacetylase 8
hg19_v1_chr5_+_68666531_68666531	0.0114709	SOX2.p2	AF076838|RAD17|5884|RAD17 homolog (S. pombe)	NM_002873|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr3_-_10067989_10068077	0.0114282	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg19_v1_chr2_-_170681352_170681419	0.0113457	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg19_v1_chrX_-_128657381_128657436	0.0113101	SOX2.p2	BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v1_chrX_-_16888442_16888460	0.0112477	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr6_-_27799304_27799337	0.0112349	SOX2.p2	NM_003541|HIST1H4K|8362|histone cluster 1, H4k	BC148271|HIST1H4J|8363|histone cluster 1, H4j	DQ892605|HIST1H4F|8361|histone cluster 1, H4f	DQ895845|HIST1H4F|8361|histone cluster 1, H4f	EU446976|HIST1H4A|8359|histone cluster 1, H4a	AK312028|HIST1H4K|8362|histone cluster 1, H4k
hg19_v1_chr16_+_14927586_14927700	0.0112279	SOX2.p2	NM_014287|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1
hg19_v1_chr9_-_32552550_32552568	0.0112236	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chrX_-_154842492_154842621	0.0111954	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg19_v1_chr6_+_13925097_13925235	0.0111653	SOX2.p2	NM_001165032|RNF182|221687|ring finger protein 182	NM_152737|RNF182|221687|ring finger protein 182	AK315528|RNF182|221687|ring finger protein 182	BC030666|RNF182|221687|ring finger protein 182	BC050030|RNF182|221687|ring finger protein 182
hg19_v1_chr7_-_122839999_122840024	0.0111625	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr17_+_64960754_64961025	0.0111388	SOX2.p2	NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4
hg19_v1_chr7_-_42276617_42276617	0.0111272	SOX2.p2	NM_000168|GLI3|2737|GLI family zinc finger 3
hg19_v1_chr3_+_49977476_49977577	0.0111132	SOX2.p2	AK291719|RBM6|10180|RNA binding motif protein 6	NM_001167582|RBM6|10180|RNA binding motif protein 6	NM_005777|RBM6|10180|RNA binding motif protein 6	AK298108|RBM6|10180|RNA binding motif protein 6	AF069517|RBM6|10180|RNA binding motif protein 6	AL832236|RBM6|10180|RNA binding motif protein 6	BX648535|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr3_+_49977582_49977625	0.0111058	SOX2.p2	AK308794|RBM6|10180|RNA binding motif protein 6	AK303371|RBM6|10180|RNA binding motif protein 6	AF091264|RBM6|10180|RNA binding motif protein 6	AK093836|RBM6|10180|RNA binding motif protein 6	AY216800|RBM6|10180|RNA binding motif protein 6	BC030057|RBM6|10180|RNA binding motif protein 6	BC046643|RBM6|10180|RNA binding motif protein 6	AF042857|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr15_-_63892950_63893135	0.011105	SOX2.p2	BC017581|LOC100130855|100130855|uncharacterized LOC100130855	BC036918|LOC100130855|100130855|uncharacterized LOC100130855	AK093077|LOC100130855|100130855|uncharacterized LOC100130855
hg19_v1_chr16_-_21663962_21663991	0.0110296	SOX2.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr17_+_59477169_59477304	0.0109236	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg19_v1_chr19_-_12595625_12595632	0.0108774	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg19_v1_chr19_-_52490050_52490102	0.0108163	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg19_v1_chr15_+_43885251_43885293	0.0107979	SOX2.p2	NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B	AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A
hg19_v1_chr8_+_19796840_19796890	0.0107909	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg19_v1_chr2_-_128615691_128615704	0.0107089	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr7_-_2595327_2595404	0.0106512	SOX2.p2	AK131083|BRAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BRAT1|221927|BRCA1-associated ATM activator 1
hg19_v1_chr3_-_195310985_195311075	0.0106409	SOX2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr17_+_73720775_73720783	0.0106275	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr8_-_105479147_105479284	0.0105064	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg19_v1_chr11_+_94800055_94800281	0.0104827	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr2_+_183943511_183943787	0.0104626	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg19_v1_chr19_-_18548118_18548118	0.0104574	SOX2.p2	AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr22_-_27014037_27014088	0.0103977	SOX2.p2	BC036790|CRYBB1|1414|crystallin, beta B1
hg19_v1_chr8_+_61429724_61429777	0.0103395	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr6_-_29644930_29644930	0.0103188	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg19_v1_chr9_+_39884941_39884982	0.0103052	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr17_+_61627976_61628049	0.0103001	SOX2.p2	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr3_+_9851643_9851643	0.0102642	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg19_v1_chr1_+_161169104_161169104	0.0102569	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg19_v1_chr11_+_118889140_118889240	0.0101057	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr10_-_73848263_73848274	0.01008	SOX2.p2	AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr3_+_73046081_73046159	0.0100287	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr19_-_18548788_18548965	0.00998891	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr5_-_150138554_150138656	0.00998826	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg19_v1_chr19_-_21950322_21950429	0.0099648	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg19_v1_chr19_-_46148606_46148841	0.00991147	SOX2.p2	AK296258|EML2|24139|echinoderm microtubule associated protein like 2	AK294668|EML2|24139|echinoderm microtubule associated protein like 2	NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2	BC029304|EML2|24139|echinoderm microtubule associated protein like 2
hg19_v1_chr2_+_204801453_204801536	0.00990785	SOX2.p2	AK314985|ICOS|29851|inducible T-cell co-stimulator	AJ277832|ICOS|29851|inducible T-cell co-stimulator	NM_012092|ICOS|29851|inducible T-cell co-stimulator	BC028006|ICOS|29851|inducible T-cell co-stimulator	BC028210|ICOS|29851|inducible T-cell co-stimulator	AB023135|ICOS|29851|inducible T-cell co-stimulator
hg19_v1_chr15_-_37392358_37392755	0.00987969	SOX2.p2	AK056216|MEIS2|4212|Meis homeobox 2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2
hg19_v1_chr19_-_19626237_19626493	0.00985701	SOX2.p2	DQ891603|TSSK6|83983|testis-specific serine kinase 6	DQ894797|TSSK6|83983|testis-specific serine kinase 6	AF329483|TSSK6|83983|testis-specific serine kinase 6	AK058166|TSSK6|83983|testis-specific serine kinase 6	AK313767|TSSK6|83983|testis-specific serine kinase 6	BC014611|TSSK6|83983|testis-specific serine kinase 6	NM_032037|TSSK6|83983|testis-specific serine kinase 6	AF348077|TSSK6|83983|testis-specific serine kinase 6
hg19_v1_chr14_+_103800492_103800528	0.00985626	SOX2.p2	NM_001969|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr4_-_151770611_151770688	0.00984364	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr6_+_35704858_35704858	0.00980481	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg19_v1_chr19_+_44488331_44488380	0.00971857	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg19_v1_chr17_-_72527592_72527612	0.00962906	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg19_v1_chr5_+_88185257_88185272	0.00958991	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg19_v1_chr20_-_55100980_55100980	0.00956427	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg19_v1_chr16_+_30419363_30419476	0.00952249	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg19_v1_chr15_-_99789585_99789827	0.00950992	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr14_+_69726680_69726680	0.00949195	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chrX_-_33357725_33357725	0.00948377	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg19_v1_chr16_+_66638632_66638650	0.00946939	SOX2.p2	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr5_-_43313581_43313612	0.00944431	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr22_+_31366662_31366813	0.00937132	SOX2.p2	
hg19_v1_chr10_+_85899184_85899331	0.00936393	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein
hg19_v1_chr14_+_62164339_62164339	0.00935978	SOX2.p2	FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr4_-_1685717_1685987	0.00928631	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg19_v1_chr12_+_19282402_19282729	0.00919781	SOX2.p2	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5
hg19_v1_chr7_+_27779743_27779807	0.00911785	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr1_+_52521856_52521944	0.00906845	SOX2.p2	NM_001136497|BTF3L4|91408|basic transcription factor 3-like 4	NM_001243767|BTF3L4|91408|basic transcription factor 3-like 4	NM_152265|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chr6_-_10415217_10415334	0.00902109	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr17_+_45973515_45973646	0.00892275	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg19_v1_chrX_-_130423034_130423034	0.00890915	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr2_+_27665232_27665312	0.00887066	SOX2.p2	BC101689|KRTCAP3|200634|keratinocyte associated protein 3	NM_001168364|KRTCAP3|200634|keratinocyte associated protein 3	NM_173853|KRTCAP3|200634|keratinocyte associated protein 3	BC101687|KRTCAP3|200634|keratinocyte associated protein 3	BC143574|KRTCAP3|200634|keratinocyte associated protein 3	AY157576|KRTCAP3|200634|keratinocyte associated protein 3	AY358993|KRTCAP3|200634|keratinocyte associated protein 3
hg19_v1_chr14_-_50583194_50583347	0.00885555	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg19_v1_chr6_+_71276606_71276645	0.00880227	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg19_v1_chr19_-_54824343_54824408	0.00879941	SOX2.p2	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
hg19_v1_chr6_+_3259185_3259293	0.00879892	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr12_+_133657439_133657469	0.00878863	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg19_v1_chr6_+_52285804_52285804	0.00876164	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg19_v1_chr2_+_136288953_136289168	0.00875902	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg19_v1_chr1_+_150255228_150255258	0.00873595	SOX2.p2	BC047238|C1orf51|148523|chromosome 1 open reading frame 51	NM_144697|C1orf51|148523|chromosome 1 open reading frame 51	AK098755|C1orf51|148523|chromosome 1 open reading frame 51	AK315397|C1orf51|148523|chromosome 1 open reading frame 51
hg19_v1_chr15_-_26961911_26961911	0.0086644	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v1_chr4_+_2819888_2819939	0.00863341	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr17_-_79212775_79212872	0.0085071	SOX2.p2	AK128728|C17orf56|146705|chromosome 17 open reading frame 56	BC064483|C17orf56|146705|chromosome 17 open reading frame 56	BC042155|C17orf56|146705|chromosome 17 open reading frame 56	AK056090|C17orf56|146705|chromosome 17 open reading frame 56
hg19_v1_chr19_+_16178170_16178350	0.00847051	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr10_+_93558182_93558197	0.00837123	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chrX_+_150863729_150863729	0.00834228	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg19_v1_chr19_+_35531409_35531409	0.00829326	SOX2.p2	M18930|HPN|3249|hepsin	NM_002151|HPN|3249|hepsin	NM_182983|HPN|3249|hepsin	X07732|HPN|3249|hepsin
hg19_v1_chr7_+_44836166_44836268	0.0082485	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr10_-_93669184_93669257	0.00824632	SOX2.p2	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3	BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3	AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3	NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3
hg19_v1_chr7_+_27779706_27779742	0.00818506	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr20_-_31239558_31239782	0.00816949	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg19_v1_chr19_+_36139233_36139272	0.00816208	SOX2.p2	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr15_-_65398578_65398696	0.00815089	SOX2.p2	BC127916|UBAP1L|390595|ubiquitin associated protein 1-like	NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like
hg19_v1_chr17_+_41924515_41924584	0.00813666	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg19_v1_chr7_-_155326538_155326556	0.00812685	SOX2.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg19_v1_chr12_+_69080722_69080805	0.0080676	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr1_-_108742738_108742802	0.00800527	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr8_+_76452202_76452227	0.00799975	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma	HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr14_+_39703119_39703318	0.00788433	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	HQ258350|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg19_v1_chr10_+_28822428_28822438	0.00785409	SOX2.p2	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chrX_-_85302538_85302565	0.00785384	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg19_v1_chr17_-_79478236_79478585	0.0078455	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chrX_+_100878101_100878182	0.00783228	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg19_v1_chr1_+_245133283_245133441	0.00781923	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg19_v1_chr6_-_137540544_137540546	0.00781466	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chrX_-_140336628_140336647	0.00779538	SOX2.p2	AJ238277|SPANXC|64663|SPANX family, member C	NM_022661|SPANXC|64663|SPANX family, member C	BC054023|SPANXC|64663|SPANX family, member C	AK225988|SPANXC|64663|SPANX family, member C
hg19_v1_chr16_+_70333058_70333095	0.00777806	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr13_-_26795821_26795893	0.00768251	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr16_+_69458562_69458566	0.00763227	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chrX_+_102192199_102192199	0.00755824	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg19_v1_chr7_+_139025104_139025240	0.00755352	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg19_v1_chr19_+_41770976_41770985	0.00754726	SOX2.p2	AK290729|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr2_-_74781061_74781087	0.00754441	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg19_v1_chr16_-_2836605_2836841	0.00753246	SOX2.p2	AF536382|PRSS33|260429|protease, serine, 33	BC062334|PRSS33|260429|protease, serine, 33	NM_152891|PRSS33|260429|protease, serine, 33
hg19_v1_chr1_+_226250433_226250434	0.00749947	SOX2.p2	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC081561|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr7_-_99698278_99698385	0.00748674	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr22_+_50312278_50312330	0.00746064	SOX2.p2	DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr11_-_14380030_14380072	0.00743953	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr3_-_49158256_49158271	0.00740705	SOX2.p2	AK294756|USP19|10869|ubiquitin specific peptidase 19
hg19_v1_chr12_+_7045437_7045476	0.00740674	SOX2.p2	
hg19_v1_chr12_+_57916607_57916693	0.00740444	SOX2.p2	AK056399|MBD6|114785|methyl-CpG binding domain protein 6	AK296990|MBD6|114785|methyl-CpG binding domain protein 6	NM_052897|MBD6|114785|methyl-CpG binding domain protein 6	BC065530|MBD6|114785|methyl-CpG binding domain protein 6
hg19_v1_chr12_+_58138663_58138937	0.00728021	SOX2.p2	AK315765|TSPAN31|6302|tetraspanin 31	NM_005981|TSPAN31|6302|tetraspanin 31	BX647402|TSPAN31|6302|tetraspanin 31	BC010377|TSPAN31|6302|tetraspanin 31	U01160|TSPAN31|6302|tetraspanin 31	AK294128|TSPAN31|6302|tetraspanin 31	CR407647|TSPAN31|6302|tetraspanin 31	DQ892877|TSPAN31|6302|tetraspanin 31	DQ896127|TSPAN31|6302|tetraspanin 31
hg19_v1_chr11_-_17498322_17498365	0.00726373	SOX2.p2	U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr6_+_71123105_71123122	0.00725437	SOX2.p2	NM_001105531|FAM135A|57579|family with sequence similarity 135, member A	NM_020819|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr3_-_39322763_39322763	0.00724277	SOX2.p2	NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg19_v1_chr9_-_34612075_34612109	0.00721283	SOX2.p2	BC032136|C9orf23|138716|chromosome 9 open reading frame 23	NM_148178|C9orf23|138716|chromosome 9 open reading frame 23	NM_148179|C9orf23|138716|chromosome 9 open reading frame 23
hg19_v1_chr3_-_10149763_10149914	0.00720289	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg19_v1_chr3_-_183145854_183146025	0.00715188	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg19_v1_chr16_+_69458489_69458543	0.00714357	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr12_+_110940004_110940147	0.00710708	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg19_v1_chr7_+_23530136_23530198	0.00703951	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chr2_+_3627725_3627765	0.00702097	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg19_v1_chr7_+_116660291_116660440	0.00683207	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr1_-_169764030_169764034	0.00671619	SOX2.p2	AL035369|METTL18|92342|methyltransferase like 18	NM_033418|METTL18|92342|methyltransferase like 18	AK313909|METTL18|92342|methyltransferase like 18
hg19_v1_chr17_+_42264300_42264417	0.00670545	SOX2.p2	AK294198|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AK096631|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_001076674|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_024107|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AY358780|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC063489|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC004306|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr16_+_68573115_68573281	0.00663703	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr3_+_73045939_73045975	0.00660987	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr3_+_48956272_48956295	0.00651741	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr12_+_133657478_133657596	0.00650941	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg19_v1_chr9_+_130830595_130830643	0.00647141	SOX2.p2	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v1_chr12_-_111893857_111893989	0.00646343	SOX2.p2	
hg19_v1_chr7_-_99774821_99775034	0.0064324	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg19_v1_chr2_+_183580960_183581189	0.00637881	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr11_-_64889581_64889671	0.00635385	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg19_v1_chr6_-_2751153_2751199	0.00634476	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg19_v1_chr11_+_61129831_61129878	0.00634427	SOX2.p2	AK027724|TMEM138|51524|transmembrane protein 138	AK307371|TMEM138|51524|transmembrane protein 138	AF151030|TMEM138|51524|transmembrane protein 138	AK303219|TMEM138|51524|transmembrane protein 138	BC005201|TMEM138|51524|transmembrane protein 138	AF151032|TMEM138|51524|transmembrane protein 138
hg19_v1_chr6_-_10694837_10694838	0.00618605	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg19_v1_chr4_-_141677470_141677529	0.00615831	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg19_v1_chr17_+_35767311_35767311	0.00615081	SOX2.p2	AK022767|TADA2A|6871|transcriptional adaptor 2A	NM_001488|TADA2A|6871|transcriptional adaptor 2A	NM_133439|TADA2A|6871|transcriptional adaptor 2A
hg19_v1_chr6_-_47277246_47277283	0.00606086	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr19_-_12912602_12912727	0.00605659	SOX2.p2	BC000452|PRDX2|7001|peroxiredoxin 2	BC003022|PRDX2|7001|peroxiredoxin 2	BC064138|PRDX2|7001|peroxiredoxin 2	Z22548|PRDX2|7001|peroxiredoxin 2	AK289485|PRDX2|7001|peroxiredoxin 2	AK293957|PRDX2|7001|peroxiredoxin 2	BC039428|PRDX2|7001|peroxiredoxin 2	AK022395|PRDX2|7001|peroxiredoxin 2	NM_005809|PRDX2|7001|peroxiredoxin 2	NM_181738|PRDX2|7001|peroxiredoxin 2
hg19_v1_chrX_-_74742871_74742879	0.00604408	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr3_+_186358148_186358383	0.00602576	SOX2.p2	AF534529|FETUB|26998|fetuin B	AJ242928|FETUB|26998|fetuin B	NM_014375|FETUB|26998|fetuin B	AB017551|FETUB|26998|fetuin B	BC069670|FETUB|26998|fetuin B	BC069820|FETUB|26998|fetuin B	BC114616|FETUB|26998|fetuin B	BC074734|FETUB|26998|fetuin B	AY373820|FETUB|26998|fetuin B	AY373821|FETUB|26998|fetuin B	AK309647|FETUB|26998|fetuin B
hg19_v1_chr13_+_34392205_34392250	0.00602074	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr6_+_139456240_139456272	0.00600916	SOX2.p2	BC070068|HECA|51696|headcase homolog (Drosophila)	AB033492|HECA|51696|headcase homolog (Drosophila)	NM_016217|HECA|51696|headcase homolog (Drosophila)
hg19_v1_chr6_-_105627857_105627857	0.00598889	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr2_+_196521470_196521681	0.00598569	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr1_+_151227188_151227206	0.00595648	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr1_+_28844762_28844803	0.00595024	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr3_+_126423037_126423118	0.00592745	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg19_v1_chr6_-_136610932_136610988	0.00585268	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr15_+_79575145_79575145	0.00582787	SOX2.p2	AK127037|ANKRD34C|390616|ankyrin repeat domain 34C	NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C
hg19_v1_chr11_-_10879365_10879672	0.00579452	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg19_v1_chr7_-_99699426_99699566	0.00577145	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr18_-_54305839_54305990	0.00576408	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr12_+_50869531_50869643	0.00566617	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr17_+_80416606_80416679	0.00566541	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr9_+_136293730_136293750	0.00565905	SOX2.p2	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13
hg19_v1_chr7_+_107301079_107301079	0.00564321	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg19_v1_chr6_+_111279762_111279898	0.0055747	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg19_v1_chr6_+_31982538_31982619	0.00548983	SOX2.p2	BC063289|C4A|720|complement component 4A (Rodgers blood group)	AK304564|C4B|721|complement component 4B (Chido blood group)	NM_001002029|C4B|721|complement component 4B (Chido blood group)	NM_001242823|LOC100293534|100293534|complement C4-B-like	NM_001252204|C4A|720|complement component 4A (Rodgers blood group)	NM_007293|C4A|720|complement component 4A (Rodgers blood group)	AB209989|C4A|720|complement component 4A (Rodgers blood group)	BC146673|C4A|720|complement component 4A (Rodgers blood group)	BC151204|C4A|720|complement component 4A (Rodgers blood group)	AK293364|C4A|720|complement component 4A (Rodgers blood group)	BC144546|C4A|720|complement component 4A (Rodgers blood group)	BC146849|C4A|720|complement component 4A (Rodgers blood group)	BC171786|C4A|720|complement component 4A (Rodgers blood group)
hg19_v1_chr1_-_205719157_205719227	0.00548316	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr12_+_66583004_66583016	0.00547521	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr19_-_52408240_52408304	0.00545879	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg19_v1_chr1_+_226250413_226250420	0.00541834	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr12_+_7079943_7080075	0.00538496	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr3_+_186648515_186648640	0.00537068	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr7_-_148725731_148725755	0.00529374	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr3_+_138067444_138067579	0.00528602	SOX2.p2	NM_001085049|MRAS|22808|muscle RAS oncogene homolog	NM_001252093|MRAS|22808|muscle RAS oncogene homolog	BC047690|MRAS|22808|muscle RAS oncogene homolog	AF043938|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr6_-_47277511_47277639	0.00520728	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_-_91487013_91487064	0.00517941	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg19_v1_chr16_+_1203240_1203412	0.0051745	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr3_+_171757432_171757437	0.00517438	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg19_v1_chr7_+_23286420_23286476	0.00516366	SOX2.p2	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb	BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb	BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb	BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr7_+_139025896_139025896	0.00513957	SOX2.p2	NM_197964|C7orf55|154791|chromosome 7 open reading frame 55
hg19_v1_chr1_+_161068150_161068191	0.00503586	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg19_v1_chr3_+_150264576_150264596	0.00501645	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr17_+_15602890_15603036	0.00496873	SOX2.p2	NM_001130842|ZNF286A|57335|zinc finger protein 286A	NM_020652|ZNF286A|57335|zinc finger protein 286A
hg19_v1_chr19_-_58609606_58609729	0.00493544	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr17_-_38256548_38256897	0.004874	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg19_v1_chr22_-_30867944_30868033	0.00484246	SOX2.p2	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)
hg19_v1_chr4_-_103266286_103266367	0.00480007	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr9_+_125281418_125281420	0.00478964	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg19_v1_chr17_-_56429495_56429577	0.00478373	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg19_v1_chr5_+_179921423_179921493	0.00477759	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr12_+_66582914_66583002	0.00467035	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr14_-_24553817_24553843	0.00465031	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper	AB593104|NRL|4901|neural retina leucine zipper	AB593106|NRL|4901|neural retina leucine zipper	AB593102|NRL|4901|neural retina leucine zipper
hg19_v1_chr11_+_126173646_126173646	0.00463387	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr2_+_207024614_207024703	0.00462566	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr11_-_124180661_124180732	0.00462099	SOX2.p2	AF238489|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	NM_001002917|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136950|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136954|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1
hg19_v1_chr1_+_199996729_199997010	0.00461965	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg19_v1_chr17_-_79478956_79479000	0.00460901	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chr17_+_27046990_27047027	0.00459441	SOX2.p2	NM_000984|RPL23A|6147|ribosomal protein L23a	U43701|RPL23A|6147|ribosomal protein L23a	AK130965|RPL23A|6147|ribosomal protein L23a	AK312123|RPL23A|6147|ribosomal protein L23a	BC058041|RPL23A|6147|ribosomal protein L23a	U37230|RPL23A|6147|ribosomal protein L23a	BC014459|RPL23A|6147|ribosomal protein L23a	U02032|RPL23A|6147|ribosomal protein L23a
hg19_v1_chr3_+_193310997_193311138	0.00456943	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr17_+_65373362_65373456	0.0045595	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr10_+_12110968_12111047	0.00454469	SOX2.p2	BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1
hg19_v1_chr5_+_137688270_137688291	0.00453621	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr3_+_150264514_150264575	0.0044637	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr22_+_50312333_50312417	0.00441772	SOX2.p2	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2	AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2	BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2	AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr12_+_56435685_56435721	0.00429925	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg19_v1_chr2_-_47403613_47403639	0.0042008	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr18_+_60383895_60383958	0.00416586	SOX2.p2	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1
hg19_v1_chr4_-_100242487_100242571	0.00415963	SOX2.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v1_chr10_+_93558139_93558165	0.00409087	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr1_-_173837122_173837133	0.00408661	SOX2.p2	AL110141|GAS5|60674|growth arrest-specific 5 (non-protein coding)	BC038733|GAS5|60674|growth arrest-specific 5 (non-protein coding)
hg19_v1_chr12_+_121163570_121163688	0.00408262	SOX2.p2	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg19_v1_chr6_-_88299666_88299690	0.00402641	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr15_-_83209185_83209287	0.00402609	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC020453|RPS17|6218|ribosomal protein S17	BC019899|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	NM_001199057|RPS17L|100505503|ribosomal protein S17-like	BC062715|RPS17|6218|ribosomal protein S17
hg19_v1_chr15_+_80352488_80352513	0.00402356	SOX2.p2	NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr6_-_47277646_47277744	0.00400698	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_+_87170515_87170594	0.00396623	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr11_+_124120422_124120422	0.00395672	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg19_v1_chr16_+_57769667_57769781	0.00393397	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr5_+_1801493_1801531	0.00392373	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg19_v1_chr7_-_50132789_50132859	0.0039057	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg19_v1_chr6_+_132873829_132873831	0.0038908	SOX2.p2	AY183468|TAAR8|83551|trace amine associated receptor 8	BC069166|TAAR8|83551|trace amine associated receptor 8	NM_053278|TAAR8|83551|trace amine associated receptor 8
hg19_v1_chr3_+_10068123_10068129	0.00381856	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr19_+_50180492_50180551	0.00376379	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr12_-_52995215_52995321	0.00374907	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	HQ258454|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg19_v1_chr19_+_55385548_55385745	0.00368786	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg19_v1_chr1_-_167883243_167883452	0.00366624	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg19_v1_chr1_+_151227209_151227234	0.00365724	SOX2.p2	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr6_-_137540551_137540566	0.00362992	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chrX_+_148769902_148769902	0.00361631	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg19_v1_chr2_+_220492286_220492423	0.00361305	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr6_+_126070813_126070872	0.00359661	SOX2.p2	AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr6_-_11232883_11232899	0.00359449	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr12_+_58176527_58176592	0.00359302	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial
hg19_v1_chr13_-_111213865_111214079	0.00358303	SOX2.p2	AJ272065|RAB20|55647|RAB20, member RAS oncogene family	DQ892145|RAB20|55647|RAB20, member RAS oncogene family	DQ895340|RAB20|55647|RAB20, member RAS oncogene family	AK000436|RAB20|55647|RAB20, member RAS oncogene family	AK000446|RAB20|55647|RAB20, member RAS oncogene family	NM_017817|RAB20|55647|RAB20, member RAS oncogene family	BC026025|RAB20|55647|RAB20, member RAS oncogene family
hg19_v1_chr11_-_82997376_82997434	0.00357997	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg19_v1_chr1_-_205719078_205719101	0.00357433	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr19_-_2015628_2015713	0.00356278	SOX2.p2	AF355797|BTBD2|55643|BTB (POZ) domain containing 2	NM_017797|BTBD2|55643|BTB (POZ) domain containing 2	AK225831|BTBD2|55643|BTB (POZ) domain containing 2
hg19_v1_chr3_-_47555079_47555206	0.00354365	SOX2.p2	DQ787088|C3orf75|54859|chromosome 3 open reading frame 75	BC000623|C3orf75|54859|chromosome 3 open reading frame 75	BC014204|C3orf75|54859|chromosome 3 open reading frame 75	AK225721|C3orf75|54859|chromosome 3 open reading frame 75	AK000218|C3orf75|54859|chromosome 3 open reading frame 75	AK298202|C3orf75|54859|chromosome 3 open reading frame 75	NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75
hg19_v1_chr19_-_17137449_17137632	0.00344494	SOX2.p2	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg19_v1_chr2_-_122159140_122159171	0.00342568	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr17_+_42786060_42786065	0.00339256	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr2_+_63277936_63277995	0.00337328	SOX2.p2	NM_014562|OTX1|5013|orthodenticle homeobox 1	AK095680|OTX1|5013|orthodenticle homeobox 1	AK297308|OTX1|5013|orthodenticle homeobox 1	BC007621|OTX1|5013|orthodenticle homeobox 1
hg19_v1_chr2_+_24807345_24807409	0.00336039	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg19_v1_chr2_+_29117503_29117573	0.00329298	SOX2.p2	NM_015131|WDR43|23160|WD repeat domain 43	D26488|WDR43|23160|WD repeat domain 43
hg19_v1_chr14_-_73925214_73925251	0.00328548	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr1_-_23696267_23696358	0.00327651	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr15_-_74495399_74495445	0.00325716	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr6_-_105307747_105307778	0.00322545	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr14_-_23564294_23564334	0.003153	SOX2.p2	AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1	AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1
hg19_v1_chr11_-_10715160_10715174	0.00314442	SOX2.p2	AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog	AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr10_-_23633771_23633771	0.0031364	SOX2.p2	BC035732|C10orf67|256815|chromosome 10 open reading frame 67	NM_153714|C10orf67|256815|chromosome 10 open reading frame 67
hg19_v1_chr17_-_3500335_3500391	0.00312974	SOX2.p2	AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1
hg19_v1_chr2_+_70314560_70314629	0.00311315	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr15_-_65477441_65477562	0.00310473	SOX2.p2	BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr11_+_61276271_61276271	0.003045	SOX2.p2	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B
hg19_v1_chr3_-_196242190_196242236	0.00303952	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg19_v1_chr15_+_55700722_55700868	0.00303247	SOX2.p2	NM_001198784|FLJ27352|145788|uncharacterized LOC145788	AK130862|FLJ27352|145788|uncharacterized LOC145788	BX648577|FLJ27352|145788|uncharacterized LOC145788
hg19_v1_chr3_-_157221127_157221135	0.00303158	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr17_-_2304217_2304415	0.00303158	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr20_+_34042908_34043241	0.0030071	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg19_v1_chr15_+_64388082_64388198	0.00297084	SOX2.p2	NM_001242933|SNX1|6642|sorting nexin 1	NM_003099|SNX1|6642|sorting nexin 1	NM_148955|SNX1|6642|sorting nexin 1	AB209013|SNX1|6642|sorting nexin 1	AK128179|SNX1|6642|sorting nexin 1	AK222561|SNX1|6642|sorting nexin 1	AK291752|SNX1|6642|sorting nexin 1
hg19_v1_chr15_+_33603162_33603176	0.00294644	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr22_-_42084819_42084912	0.00292886	SOX2.p2	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v1_chr2_+_84743576_84743578	0.0029078	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg19_v1_chr11_-_47664014_47664212	0.00277787	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier 2	DQ894993|MTCH2|23788|mitochondrial carrier 2	AK223097|MTCH2|23788|mitochondrial carrier 2	BC000875|MTCH2|23788|mitochondrial carrier 2	AY380792|MTCH2|23788|mitochondrial carrier 2	AF085361|MTCH2|23788|mitochondrial carrier 2	AF176008|MTCH2|23788|mitochondrial carrier 2	AK295218|MTCH2|23788|mitochondrial carrier 2	AK313032|MTCH2|23788|mitochondrial carrier 2	NM_014342|MTCH2|23788|mitochondrial carrier 2
hg19_v1_chrX_-_132092224_132092289	0.0027303	SOX2.p2	AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2
hg19_v1_chr17_+_74075262_74075348	0.0027277	SOX2.p2	AK122638|ZACN|353174|zinc activated ligand-gated ion channel	NM_180990|ZACN|353174|zinc activated ligand-gated ion channel	AF512521|ZACN|353174|zinc activated ligand-gated ion channel	BC110596|ZACN|353174|zinc activated ligand-gated ion channel	BC110597|ZACN|353174|zinc activated ligand-gated ion channel	AB223030|ZACN|353174|zinc activated ligand-gated ion channel
hg19_v1_chr4_+_175205044_175205182	0.0027192	SOX2.p2	NM_001145314|CEP44|80817|centrosomal protein 44kDa	BC038667|CEP44|80817|centrosomal protein 44kDa	AB051499|CEP44|80817|centrosomal protein 44kDa	AK094961|CEP44|80817|centrosomal protein 44kDa	AK292484|CEP44|80817|centrosomal protein 44kDa
hg19_v1_chr11_-_62783281_62783316	0.00271389	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg19_v1_chr20_+_62152101_62152166	0.00268397	SOX2.p2	BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg19_v1_chr2_-_190649075_190649122	0.00262117	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg19_v1_chr20_+_58571416_58571428	0.00259237	SOX2.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg19_v1_chr8_-_95565669_95565745	0.00259205	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429
hg19_v1_chr17_-_10372875_10372875	0.00249256	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr3_+_111718006_111718269	0.00248196	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg19_v1_chr11_-_6633178_6633238	0.00244146	SOX2.p2	AL833496|TAF10|6881|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v1_chr2_-_74875163_74875163	0.00244109	SOX2.p2	BC025997|C2orf65|130951|chromosome 2 open reading frame 65	NM_138804|C2orf65|130951|chromosome 2 open reading frame 65
hg19_v1_chr12_-_91398757_91398802	0.00241997	SOX2.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg19_v1_chr17_-_74068522_74068575	0.00241441	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr3_-_143567163_143567372	0.00237395	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg19_v1_chr18_-_54305657_54305837	0.00235971	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr5_+_140501579_140501580	0.00231534	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr12_+_133656984_133657046	0.00229386	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg19_v1_chr6_-_30028755_30028971	0.00227618	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BC067890|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg19_v1_chr15_+_93443418_93443555	0.00227326	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr10_+_93558068_93558138	0.00225352	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr6_-_105307782_105307795	0.0022182	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr12_+_6898705_6898790	0.00216834	SOX2.p2	AK300052|CD4|920|CD4 molecule	AK308344|CD4|920|CD4 molecule	BC025782|CD4|920|CD4 molecule
hg19_v1_chr6_-_47277354_47277423	0.00216359	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr11_+_61008643_61008668	0.00212465	SOX2.p2	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)
hg19_v1_chr6_-_100016517_100016689	0.00212258	SOX2.p2	BC010135|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg19_v1_chr1_-_151319674_151319702	0.00211774	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg19_v1_chr6_-_42714547_42714557	0.00209336	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr6_-_30585024_30585083	0.0020656	SOX2.p2	BC150310|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chr1_+_40859016_40859016	0.0020338	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg19_v1_chr6_+_47666288_47666301	0.00197989	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg19_v1_chr6_+_126661221_126661319	0.00196262	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr5_+_140723600_140723602	0.00190781	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg19_v1_chr13_-_99852925_99853010	0.00189729	SOX2.p2	BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)
hg19_v1_chr1_+_29138653_29138653	0.00185621	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg19_v1_chr3_-_122102057_122102097	0.00180999	SOX2.p2	BC109378|CCDC58|131076|coiled-coil domain containing 58	BC054051|CCDC58|131076|coiled-coil domain containing 58	BC062725|CCDC58|131076|coiled-coil domain containing 58	NM_001017928|CCDC58|131076|coiled-coil domain containing 58
hg19_v1_chr12_-_11062160_11062160	0.00180835	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg19_v1_chr8_-_67090690_67090845	0.00180794	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr1_-_26232643_26232643	0.00180222	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr11_-_76091866_76092151	0.00178659	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v1_chr8_-_145838887_145838887	0.0017484	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg19_v1_chr2_-_207024103_207024242	0.00174263	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v1_chr16_+_67876221_67876300	0.00171442	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg19_v1_chr19_-_52674895_52674895	0.00167972	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg19_v1_chr2_+_113033146_113033177	0.00167707	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg19_v1_chr1_-_200378832_200378986	0.00164269	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr16_+_68573660_68573660	0.0016025	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr13_+_45694647_45694790	0.00158912	SOX2.p2	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr1_-_226496838_226496954	0.00158053	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr17_-_47439326_47439834	0.00157348	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg19_v1_chr6_-_33168369_33168437	0.0015449	SOX2.p2	M84820|RXRB|6257|retinoid X receptor, beta	AB209244|RXRB|6257|retinoid X receptor, beta	X63522|RXRB|6257|retinoid X receptor, beta	AK225842|RXRB|6257|retinoid X receptor, beta	BC001167|RXRB|6257|retinoid X receptor, beta	NM_021976|RXRB|6257|retinoid X receptor, beta	AK295759|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr19_+_50191920_50191941	0.00153939	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr1_+_154947116_154947142	0.00153527	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg19_v1_chr11_+_33037727_33037727	0.00148696	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg19_v1_chr1_-_117664349_117664410	0.00146326	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45
hg19_v1_chr6_-_52926486_52926579	0.00144331	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg19_v1_chr12_+_15475445_15475658	0.00142804	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg19_v1_chr3_+_57743027_57743378	0.00127316	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg19_v1_chrX_-_65858882_65858891	0.0012164	SOX2.p2	BC034919|EDA2R|60401|ectodysplasin A2 receptor	AK296264|EDA2R|60401|ectodysplasin A2 receptor	AK299018|EDA2R|60401|ectodysplasin A2 receptor	NM_021783|EDA2R|60401|ectodysplasin A2 receptor
hg19_v1_chr2_+_70314714_70314723	0.0012052	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr1_+_107599266_107599465	0.00117501	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg19_v1_chr19_+_57791281_57791431	0.00114146	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg19_v1_chr1_-_20126368_20126452	0.00114126	SOX2.p2	BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4	NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4
hg19_v1_chr2_-_127977653_127977781	0.00112468	SOX2.p2	AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v1_chr18_+_32820987_32821106	0.00111786	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397
hg19_v1_chr7_+_29234111_29234135	0.00108147	SOX2.p2	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr20_+_44258384_44258418	0.00107933	SOX2.p2	AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A	NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A	BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A
hg19_v1_chr15_-_35046688_35046781	0.00107888	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg19_v1_chr2_+_70314734_70314760	0.00105322	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr2_+_103353341_103353423	0.00103109	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg19_v1_chr8_-_37797646_37797646	0.00102766	SOX2.p2	BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1	NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1
hg19_v1_chr15_+_74218962_74219120	0.00102732	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr4_+_155702426_155702499	0.000977158	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg19_v1_chrX_+_71401525_71401626	0.000962827	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v1_chr1_-_154193073_154193272	0.000949505	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg19_v1_chr2_-_163695028_163695221	0.000938914	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v1_chr3_+_10068097_10068121	0.000937631	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr10_-_128077011_128077051	0.0008743	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr17_-_45973142_45973159	0.000835468	SOX2.p2	
hg19_v1_chr21_-_42218587_42218650	0.000833163	SOX2.p2	AB209136|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr17_-_61819165_61819329	0.000830454	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr6_-_74230155_74230185	0.000768796	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg19_v1_chr10_-_103540125_103540125	0.000718273	SOX2.p2	NM_001206389|FGF8|2253|fibroblast growth factor 8 (androgen-induced)
hg19_v1_chr5_+_55033844_55033908	0.000714798	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr1_+_1115076_1115109	0.000686781	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg19_v1_chr2_+_85132999_85133125	0.000674736	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10
hg19_v1_chrX_-_100603673_100603749	0.000663642	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v1_chr18_-_44702647_44702731	0.000653581	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr15_-_74495093_74495219	0.000646043	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr3_-_139258531_139258670	0.000614306	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr9_-_28719302_28719302	0.000597903	SOX2.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg19_v1_chr11_+_71544245_71544245	0.000594109	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg19_v1_chr18_-_48724031_48724050	0.000578104	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr4_-_111119752_111119819	0.000561907	SOX2.p2	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6	AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6
hg19_v1_chr1_+_220267418_220267487	0.000523414	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr8_+_17780351_17780442	0.000494144	SOX2.p2	L27841|PCM1|5108|pericentriolar material 1	NM_006197|PCM1|5108|pericentriolar material 1
hg19_v1_chr16_+_71496180_71496197	0.000473694	SOX2.p2	
hg19_v1_chr16_+_30418576_30418734	0.000419554	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg19_v1_chr19_-_51014344_51014476	0.000397171	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg19_v1_chr12_+_110152186_110152189	0.000363432	SOX2.p2	NM_032829|C12orf34|84915|chromosome 12 open reading frame 34	BC020193|C12orf34|84915|chromosome 12 open reading frame 34
hg19_v1_chrX_+_37865834_37865866	0.000331148	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg19_v1_chr13_+_45694585_45694644	0.000329654	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr19_+_35782988_35783096	0.000297648	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr12_+_6898605_6898642	0.000254054	SOX2.p2	NM_000616|CD4|920|CD4 molecule	NM_001195014|CD4|920|CD4 molecule	NM_001195015|CD4|920|CD4 molecule	NM_001195016|CD4|920|CD4 molecule	NM_001195017|CD4|920|CD4 molecule
hg19_v1_chr16_+_66637934_66638059	0.000237928	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr9_+_137772653_137772667	0.000190067	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg19_v1_chr1_+_40942878_40942886	0.00016817	SOX2.p2	BC041873|ZNF642|339559|zinc finger protein 642
hg19_v1_chr1_+_40943301_40943301	0.000153506	SOX2.p2	AK122618|ZNF642|339559|zinc finger protein 642	NM_198494|ZNF642|339559|zinc finger protein 642
hg19_v1_chr3_-_63849456_63849488	0.000151997	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr11_-_111782447_111782539	0.00013434	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg19_v1_chr17_+_7323642_7323702	0.000131554	SOX2.p2	AK097400|SPEM1|374768|spermatid maturation 1	BC033882|SPEM1|374768|spermatid maturation 1	NM_199339|SPEM1|374768|spermatid maturation 1
hg19_v1_chr6_-_42713783_42713810	0.000114261	SOX2.p2	BT007002|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr1_-_176176283_176176354	0.000101739	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chrX_-_100129127_100129350	8.33531e-05	SOX2.p2	AJ438989|NOX1|27035|NADPH oxidase 1	DQ424904|NOX1|27035|NADPH oxidase 1	BC075014|NOX1|27035|NADPH oxidase 1	BC075015|NOX1|27035|NADPH oxidase 1	AF166326|NOX1|27035|NADPH oxidase 1	AF166327|NOX1|27035|NADPH oxidase 1	AF166328|NOX1|27035|NADPH oxidase 1	AK313678|NOX1|27035|NADPH oxidase 1	AK292201|NOX1|27035|NADPH oxidase 1	AF127763|NOX1|27035|NADPH oxidase 1	NM_007052|NOX1|27035|NADPH oxidase 1	NM_013955|NOX1|27035|NADPH oxidase 1
hg19_v1_chr6_+_3259134_3259183	8.19725e-05	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr1_+_228285594_228285686	8.09791e-05	SOX2.p2	BC010415|ARF1|375|ADP-ribosylation factor 1
hg19_v1_chr19_-_58609574_58609587	8.08552e-05	SOX2.p2	AY279352|ZSCAN18|65982|zinc finger and SCAN domain containing 18	BC022846|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AK225548|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr11_+_6518489_6518530	4.27475e-05	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg19_v1_chr2_+_70314903_70314932	3.16574e-06	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
