hg19_v2_chr1_+_61547894_61547980	1.28164	AGCUUAU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr10_+_112631547_112631596	1.11702	AGCUUAU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr9_-_14314066_14314075	1.10122	AGCUUAU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr1_+_178694300_178694346	0.740571	AGCUUAU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr2_-_43453734_43453751	0.677991	AGCUUAU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr4_-_102268628_102268693	0.636682	AGCUUAU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr20_-_23030296_23030378	0.588284	AGCUUAU	ENST00000377103.2|THBD|ENSG00000178726.6|thrombomodulin
hg19_v2_chr8_-_9008206_9008222	0.581681	AGCUUAU	ENST00000310455.3|PPP1R3B|ENSG00000173281.4|protein phosphatase 1, regulatory subunit 3B
hg19_v2_chr3_-_18466787_18466861	0.53974	AGCUUAU	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr5_+_56111361_56111403	0.524376	AGCUUAU	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr9_+_36036430_36036430	0.515932	AGCUUAU	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr22_+_33197683_33197698	0.499816	AGCUUAU	ENST00000266085.6|TIMP3|ENSG00000100234.11|TIMP metallopeptidase inhibitor 3
hg19_v2_chr1_+_2160134_2160134	0.447949	AGCUUAU	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr8_+_98881268_98881382	0.446363	AGCUUAU	ENST00000254898.5|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000524308.1|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000522025.2|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr12_+_48516357_48516436	0.403905	AGCUUAU	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr1_+_203274639_203274664	0.373985	AGCUUAU	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr2_+_47630108_47630211	0.369699	AGCUUAU	ENST00000233146.2|MSH2|ENSG00000095002.8|mutS homolog 2 	ENST00000454849.1|MSH2|ENSG00000095002.8|mutS homolog 2 	ENST00000543555.1|MSH2|ENSG00000095002.8|mutS homolog 2
hg19_v2_chrX_-_24045303_24045303	0.369353	AGCUUAU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr3_+_110790590_110790603	0.366141	AGCUUAU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr4_+_4861385_4861398	0.352521	AGCUUAU	ENST00000382723.4|MSX1|ENSG00000163132.6|msh homeobox 1
hg19_v2_chr8_-_81787006_81787031	0.324993	AGCUUAU	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr16_+_12070567_12070623	0.309558	AGCUUAU	ENST00000566228.1|SNX29|ENSG00000048471.9|sorting nexin 29
hg19_v2_chr5_+_170846640_170846660	0.29629	AGCUUAU	ENST00000274625.5|FGF18|ENSG00000156427.7|fibroblast growth factor 18
hg19_v2_chr13_+_73632897_73632930	0.295317	AGCUUAU	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr3_+_159706537_159706741	0.294899	AGCUUAU	ENST00000305579.2|IL12A|ENSG00000168811.2|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) 	ENST00000480787.1|IL12A|ENSG00000168811.2|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) 	ENST00000466512.1|IL12A|ENSG00000168811.2|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)
hg19_v2_chr4_+_113152881_113152912	0.2652	AGCUUAU	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr11_+_101981169_101981210	0.260406	AGCUUAU	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chrX_-_18372792_18372847	0.23873	AGCUUAU	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr5_-_38595498_38595514	0.217308	AGCUUAU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr12_-_9913489_9913506	0.216041	AGCUUAU	ENST00000228434.3|CD69|ENSG00000110848.4|CD69 molecule 	ENST00000536709.1|CD69|ENSG00000110848.4|CD69 molecule
hg19_v2_chr2_-_85581701_85581743	0.213095	AGCUUAU	ENST00000295802.4|RETSAT|ENSG00000042445.9|retinol saturase (all-trans-retinol 13,14-reductase)
hg19_v2_chr8_-_22550815_22550844	0.206875	AGCUUAU	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr16_+_69221028_69221092	0.186945	AGCUUAU	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr1_+_33005020_33005077	0.185639	AGCUUAU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr5_-_54281491_54281517	0.181521	AGCUUAU	ENST00000381405.4|ESM1|ENSG00000164283.8|endothelial cell-specific molecule 1
hg19_v2_chr6_+_148663729_148663847	0.172522	AGCUUAU	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr2_-_180129484_180129574	0.172359	AGCUUAU	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr4_+_38665810_38665827	0.1711	AGCUUAU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr16_+_4364762_4364762	0.167503	AGCUUAU	ENST00000262366.3|GLIS2|ENSG00000126603.4|GLIS family zinc finger 2
hg19_v2_chr4_-_89744457_89744512	0.166093	AGCUUAU	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr4_+_144257915_144258009	0.161844	AGCUUAU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr12_-_12419703_12419811	0.157184	AGCUUAU	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr14_+_57735614_57735629	0.153601	AGCUUAU	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr1_+_154377669_154377699	0.153523	AGCUUAU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr21_-_39870339_39870443	0.153221	AGCUUAU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr5_+_10353780_10353890	0.151647	AGCUUAU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr8_-_10697281_10697365	0.147828	AGCUUAU	ENST00000524114.1|PINX1|ENSG00000254093.4|PIN2/TERF1 interacting, telomerase inhibitor 1 	ENST00000553390.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7 	ENST00000554914.1|SOX7|ENSG00000258724.1|Transcription factor SOX-7; Uncharacterized protein; cDNA FLJ58508, highly similar to Transcription factor SOX-7
hg19_v2_chr9_+_133971909_133971943	0.147133	AGCUUAU	ENST00000247291.3|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372302.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372300.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372298.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like
hg19_v2_chr17_+_58755184_58755261	0.142727	AGCUUAU	ENST00000589222.1|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3 	ENST00000407086.3|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3 	ENST00000390652.5|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3
hg19_v2_chr14_+_57046500_57046529	0.141396	AGCUUAU	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr5_-_150080472_150080669	0.132316	AGCUUAU	ENST00000521464.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000518917.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000447771.2|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000540000.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000199814.4|RBM22|ENSG00000086589.7|RNA binding motif protein 22
hg19_v2_chr10_-_12238071_12238154	0.127725	AGCUUAU	ENST00000491614.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENST00000537776.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5
hg19_v2_chr17_-_30669138_30669208	0.124919	AGCUUAU	ENST00000225805.4|C17orf75|ENSG00000108666.5|chromosome 17 open reading frame 75 	ENST00000577809.1|C17orf75|ENSG00000108666.5|chromosome 17 open reading frame 75
hg19_v2_chr3_-_52713729_52713784	0.123399	AGCUUAU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr11_-_94964354_94964374	0.122148	AGCUUAU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr3_+_152017181_152017229	0.121447	AGCUUAU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr11_+_120207787_120207962	0.120515	AGCUUAU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr2_+_45878790_45878913	0.115339	AGCUUAU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr11_-_130786400_130786407	0.114882	AGCUUAU	ENST00000265909.4|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chr2_-_218808771_218808851	0.1143	AGCUUAU	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr3_-_72496035_72496069	0.112855	AGCUUAU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr10_-_14590644_14590669	0.107036	AGCUUAU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr2_+_20646824_20646844	0.105824	AGCUUAU	ENST00000272233.4|RHOB|ENSG00000143878.8|ras homolog family member B
hg19_v2_chr12_+_5019061_5019078	0.104822	AGCUUAU	ENST00000382545.3|KCNA1|ENSG00000111262.4|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
hg19_v2_chr2_+_86947296_86947434	0.100708	AGCUUAU	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr2_+_170683942_170683972	0.100124	AGCUUAU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr10_+_72164135_72164135	0.0969282	AGCUUAU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr8_-_10588010_10588030	0.0939107	AGCUUAU	ENST00000304501.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7
hg19_v2_chrX_-_20284958_20285039	0.0938621	AGCUUAU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr9_-_16870704_16870841	0.0915751	AGCUUAU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr22_+_40573921_40573946	0.0908486	AGCUUAU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr15_-_102029873_102029917	0.0874496	AGCUUAU	ENST00000348070.1|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000358417.3|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000344273.2|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6
hg19_v2_chr10_-_3827417_3827473	0.0809457	AGCUUAU	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr14_-_31676964_31677017	0.075176	AGCUUAU	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr2_+_228678550_228678570	0.0743186	AGCUUAU	ENST00000409189.3|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20 	ENST00000358813.4|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20
hg19_v2_chr7_+_102715315_102715380	0.0735643	AGCUUAU	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr16_-_20911641_20911720	0.0729798	AGCUUAU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr18_+_67956135_67956144	0.0722324	AGCUUAU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr1_-_214724566_214724566	0.0720893	AGCUUAU	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr18_-_72921303_72921339	0.0711128	AGCUUAU	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr19_+_14492247_14492264	0.0706169	AGCUUAU	ENST00000357355.3|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000592261.2|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000242786.5|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr1_-_153895377_153895465	0.0703666	AGCUUAU	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr7_+_8008418_8008443	0.0674916	AGCUUAU	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr6_+_119215308_119215391	0.0617262	AGCUUAU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chrX_+_123095155_123095179	0.0600607	AGCUUAU	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr20_+_62371206_62371224	0.0591256	AGCUUAU	ENST00000266077.2|SLC2A4RG|ENSG00000125520.9|SLC2A4 regulator
hg19_v2_chr15_-_38856836_38857029	0.0589222	AGCUUAU	ENST00000450598.2|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000559830.1|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000558164.1|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000310803.5|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated)
hg19_v2_chr5_+_154238096_154238119	0.0556236	AGCUUAU	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr16_+_69599861_69599887	0.0555544	AGCUUAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr5_+_86564739_86564791	0.0515526	AGCUUAU	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr7_-_30029367_30029474	0.051154	AGCUUAU	ENST00000242059.5|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chrX_+_100805496_100805514	0.0503935	AGCUUAU	ENST00000372829.3|ARMCX1|ENSG00000126947.7|armadillo repeat containing, X-linked 1
hg19_v2_chr10_+_70320413_70320413	0.0495312	AGCUUAU	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr6_-_159466136_159466184	0.0487409	AGCUUAU	ENST00000367066.3|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein 	ENST00000326965.6|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr15_+_66161871_66161893	0.0483259	AGCUUAU	ENST00000569896.1|RAB11A|ENSG00000103769.5|RAB11A, member RAS oncogene family
hg19_v2_chr17_+_38278530_38278605	0.0478771	AGCUUAU	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr16_-_75498553_75498635	0.0450136	AGCUUAU	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr2_-_201936302_201936416	0.044257	AGCUUAU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr1_-_115632035_115632149	0.0439203	AGCUUAU	ENST00000433172.1|TSPAN2|ENSG00000134198.5|tetraspanin 2 	ENST00000369514.2|TSPAN2|ENSG00000134198.5|tetraspanin 2 	ENST00000369516.2|TSPAN2|ENSG00000134198.5|tetraspanin 2 	ENST00000369515.2|TSPAN2|ENSG00000134198.5|tetraspanin 2
hg19_v2_chr4_+_86396265_86396276	0.0406062	AGCUUAU	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr9_-_123476719_123476810	0.0386615	AGCUUAU	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr17_+_61627814_61627871	0.0381052	AGCUUAU	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr17_+_36452989_36453152	0.0380412	AGCUUAU	ENST00000312513.5|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45 	ENST00000582535.1|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45
hg19_v2_chr15_-_55881135_55881192	0.0375309	AGCUUAU	ENST00000302000.6|PYGO1|ENSG00000171016.7|pygopus family PHD finger 1
hg19_v2_chr3_+_28283069_28283168	0.0359028	AGCUUAU	ENST00000466830.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1 	ENST00000423894.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1
hg19_v2_chr15_-_75249793_75249810	0.0351225	AGCUUAU	ENST00000322177.5|RPP25|ENSG00000178718.5|ribonuclease P/MRP 25kDa subunit
hg19_v2_chr14_+_64854958_64855091	0.03507	AGCUUAU	ENST00000555709.2|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554739.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554768.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000216605.8|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
hg19_v2_chr2_-_64371546_64371588	0.0349011	AGCUUAU	ENST00000358912.4|PELI1|ENSG00000197329.7|pellino E3 ubiquitin protein ligase 1
hg19_v2_chr17_-_77813186_77813249	0.0345686	AGCUUAU	ENST00000448310.1|CBX4|ENSG00000141582.10|chromobox homolog 4 	ENST00000269397.4|CBX4|ENSG00000141582.10|chromobox homolog 4
hg19_v2_chr7_-_113559104_113559120	0.0336771	AGCUUAU	ENST00000284601.3|PPP1R3A|ENSG00000154415.3|protein phosphatase 1, regulatory subunit 3A
hg19_v2_chr10_+_76871454_76871467	0.0310903	AGCUUAU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr5_-_32313019_32313081	0.0296135	AGCUUAU	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr11_-_110167352_110167447	0.0293297	AGCUUAU	ENST00000533991.1|RDX|ENSG00000137710.10|radixin 	ENST00000528498.1|RDX|ENSG00000137710.10|radixin 	ENST00000405097.1|RDX|ENSG00000137710.10|radixin 	ENST00000528900.1|RDX|ENSG00000137710.10|radixin 	ENST00000530301.1|RDX|ENSG00000137710.10|radixin 	ENST00000343115.4|RDX|ENSG00000137710.10|radixin
hg19_v2_chr12_-_123011536_123011547	0.0291704	AGCUUAU	ENST00000331738.7|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000354654.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr7_+_11013491_11013553	0.0275069	AGCUUAU	ENST00000403050.3|PHF14|ENSG00000106443.10|PHD finger protein 14 	ENST00000445996.2|PHF14|ENSG00000106443.10|PHD finger protein 14
hg19_v2_chr20_+_277737_277737	0.0274596	AGCUUAU	ENST00000382352.3|ZCCHC3|ENSG00000177764.6|zinc finger, CCHC domain containing 3
hg19_v2_chr10_+_75757863_75757897	0.0251309	AGCUUAU	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr1_+_222791417_222791455	0.0247372	AGCUUAU	ENST00000344922.5|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344441.6|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344507.1|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr12_+_22778009_22778112	0.0238883	AGCUUAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr20_+_56884752_56884799	0.0238151	AGCUUAU	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr15_-_42840961_42841005	0.0233447	AGCUUAU	ENST00000563454.1|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000397130.3|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000570160.1|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000323443.2|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57
hg19_v2_chr11_-_44331679_44331716	0.0227531	AGCUUAU	ENST00000329255.3|ALX4|ENSG00000052850.5|ALX homeobox 4
hg19_v2_chr12_+_53848505_53848532	0.0179866	AGCUUAU	ENST00000552819.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000455667.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr1_-_245027833_245027855	0.0159341	AGCUUAU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr5_+_172483347_172483407	0.0157794	AGCUUAU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_-_89770582_89770603	0.0153669	AGCUUAU	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr2_+_70314579_70314590	0.0139388	AGCUUAU	ENST00000303577.5|PCBP1|ENSG00000169564.5|poly(rC) binding protein 1
hg19_v2_chr2_-_198650037_198650074	0.0116288	AGCUUAU	ENST00000392296.4|BOLL|ENSG00000152430.13|boule-like RNA-binding protein
hg19_v2_chr13_+_28813645_28813770	0.0115748	AGCUUAU	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr16_-_2246436_2246526	0.011097	AGCUUAU	ENST00000343516.6|CASKIN1|ENSG00000167971.14|CASK interacting protein 1
hg19_v2_chr1_-_19283163_19283180	0.0106636	AGCUUAU	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr8_-_117886955_117887105	0.00633307	AGCUUAU	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr8_-_41909496_41909512	0.00546251	AGCUUAU	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr2_-_69870835_69870853	0.00453532	AGCUUAU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr1_+_64239657_64239724	0.00419338	AGCUUAU	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr17_+_60536002_60536040	0.00316449	AGCUUAU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr1_+_224301787_224301836	0.00292866	AGCUUAU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr1_+_36273743_36273773	0.00263343	AGCUUAU	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr4_+_81951957_81952119	0.00141395	AGCUUAU	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr16_-_4897266_4897343	0.000175032	AGCUUAU	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
