hg19_v2_chr14_-_95236551_95236576	0.473453	ALX1_ARX	ENST00000238558.3|GSC|ENSG00000133937.3|goosecoid homeobox
hg19_v2_chr17_+_39261584_39261584	0.452904	ALX1_ARX	ENST00000391415.1|KRTAP4-9|ENSG00000212722.6|keratin associated protein 4-9
hg19_v2_chr6_-_134639180_134639220	0.4385	ALX1_ARX	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr2_+_162272605_162272753	0.373273	ALX1_ARX	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr6_-_27835357_27835375	0.350101	ALX1_ARX	ENST00000331442.3|HIST1H1B|ENSG00000184357.3|histone cluster 1, H1b
hg19_v2_chrX_+_38211777_38211798	0.3247	ALX1_ARX	ENST00000039007.4|OTC|ENSG00000036473.6|ornithine carbamoyltransferase
hg19_v2_chr6_+_34204642_34204664	0.29153	ALX1_ARX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr10_-_31146615_31146708	0.287774	ALX1_ARX	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr3_-_164914640_164914667	0.279327	ALX1_ARX	ENST00000241274.3|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr11_+_55029628_55029658	0.264603	ALX1_ARX	ENST00000417545.2|TRIM48|ENSG00000150244.8|tripartite motif containing 48
hg19_v2_chr2_+_152214098_152214115	0.248603	ALX1_ARX	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr18_+_616711_616720	0.234922	ALX1_ARX	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr2_-_145278475_145278621	0.224498	ALX1_ARX	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr12_-_43833515_43833515	0.220473	ALX1_ARX	ENST00000549670.1|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20 	ENST00000395541.2|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20
hg19_v2_chr18_+_616672_616681	0.210656	ALX1_ARX	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr8_+_11961898_11961898	0.206147	ALX1_ARX	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chr8_-_10512569_10512612	0.202501	ALX1_ARX	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr11_-_8964580_8964580	0.20151	ALX1_ARX	ENST00000325884.1|ASCL3|ENSG00000176009.2|achaete-scute family bHLH transcription factor 3
hg19_v2_chr12_-_118797475_118797527	0.199536	ALX1_ARX	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr2_+_196313239_196313256	0.185992	ALX1_ARX	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chrX_-_11284095_11284131	0.159862	ALX1_ARX	ENST00000303025.6|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6 	ENST00000534860.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr4_-_100356291_100356446	0.157965	ALX1_ARX	ENST00000476959.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 	ENST00000482593.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr3_-_196242233_196242240	0.156879	ALX1_ARX	ENST00000397537.2|SMCO1|ENSG00000214097.4|single-pass membrane protein with coiled-coil domains 1
hg19_v2_chr6_+_12007963_12008103	0.153614	ALX1_ARX	ENST00000607445.1|RP11-456H18.2|ENSG00000229896.2|RP11-456H18.2
hg19_v2_chr5_-_160279207_160279247	0.152017	ALX1_ARX	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr3_-_12587055_12587055	0.151442	ALX1_ARX	ENST00000564146.3|C3orf83|ENSG00000225526.4|chromosome 3 open reading frame 83
hg19_v2_chr17_+_3118915_3118915	0.146406	ALX1_ARX	ENST00000304094.1|OR1A1|ENSG00000172146.1|olfactory receptor, family 1, subfamily A, member 1
hg19_v2_chr3_+_130569429_130569479	0.143116	ALX1_ARX	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr6_+_12007897_12007910	0.142293	ALX1_ARX	ENST00000437559.1|RP11-456H18.2|ENSG00000229896.2|RP11-456H18.2
hg19_v2_chr3_-_191000172_191000209	0.139675	ALX1_ARX	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr17_-_60885700_60885711	0.135939	ALX1_ARX	ENST00000583600.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr2_+_102413726_102413769	0.135686	ALX1_ARX	ENST00000350878.4|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr17_-_60885659_60885695	0.13536	ALX1_ARX	ENST00000311269.5|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr1_+_50459990_50459990	0.133892	ALX1_ARX	ENST00000448346.1|AL645730.2|ENSG00000227839.1|AL645730.2
hg19_v2_chr17_-_39254391_39254395	0.132906	ALX1_ARX	ENST00000333822.4|KRTAP4-8|ENSG00000204880.6|keratin associated protein 4-8
hg19_v2_chr7_+_90339169_90339182	0.122356	ALX1_ARX	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr11_-_96076334_96076419	0.121422	ALX1_ARX	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chr11_-_40315640_40315684	0.120993	ALX1_ARX	ENST00000278198.2|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chr10_-_50396425_50396450	0.119807	ALX1_ARX	ENST00000374148.1|C10orf128|ENSG00000204161.9|chromosome 10 open reading frame 128
hg19_v2_chr4_-_177116772_177116822	0.119485	ALX1_ARX	ENST00000280191.2|SPATA4|ENSG00000150628.2|spermatogenesis associated 4
hg19_v2_chr12_-_10151773_10151899	0.116237	ALX1_ARX	ENST00000298527.6|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B 	ENST00000348658.4|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B
hg19_v2_chr1_+_62439037_62439047	0.115025	ALX1_ARX	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr1_-_154600421_154600480	0.112779	ALX1_ARX	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr1_-_151148442_151148469	0.110724	ALX1_ARX	ENST00000441701.1|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle) 	ENST00000416280.2|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle)
hg19_v2_chr8_-_61880248_61880334	0.109309	ALX1_ARX	ENST00000525556.1|AC022182.3|ENSG00000254802.1|AC022182.3
hg19_v2_chr12_+_122688090_122688284	0.103619	ALX1_ARX	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chrX_-_19817869_19817922	0.0997471	ALX1_ARX	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr4_-_87028478_87028514	0.0978827	ALX1_ARX	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr12_+_14572070_14572164	0.0942909	ALX1_ARX	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr2_+_119699864_119699905	0.0929693	ALX1_ARX	ENST00000541757.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure 	ENST00000412481.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chr17_+_39240459_39240459	0.0924724	ALX1_ARX	ENST00000391417.4|KRTAP4-7|ENSG00000240871.3|keratin associated protein 4-7
hg19_v2_chr5_-_59783882_59783910	0.0921173	ALX1_ARX	ENST00000505507.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000502484.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr3_-_157824292_157824334	0.0910747	ALX1_ARX	ENST00000483851.2|SHOX2|ENSG00000168779.15|short stature homeobox 2
hg19_v2_chr6_+_15401075_15401095	0.0910075	ALX1_ARX	ENST00000541660.1|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr2_+_119699742_119699777	0.0894309	ALX1_ARX	ENST00000327097.4|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chr6_+_3259122_3259142	0.0881319	ALX1_ARX	ENST00000438998.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000380305.4|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr4_-_119759795_119759833	0.0877576	ALX1_ARX	ENST00000419654.2|SEC24D|ENSG00000150961.10|SEC24 family member D
hg19_v2_chr4_+_69313145_69313167	0.0869509	ALX1_ARX	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr18_-_19994830_19994830	0.086945	ALX1_ARX	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr9_+_124329336_124329406	0.0863524	ALX1_ARX	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chrX_+_36254051_36254051	0.0853743	ALX1_ARX	ENST00000378657.4|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr10_+_69865866_69865912	0.0853403	ALX1_ARX	ENST00000354393.2|MYPN|ENSG00000138347.11|myopalladin
hg19_v2_chr1_-_151148492_151148512	0.0846148	ALX1_ARX	ENST00000295314.4|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle)
hg19_v2_chr2_+_185463093_185463181	0.0841638	ALX1_ARX	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr12_-_118628350_118628371	0.0835808	ALX1_ARX	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr2_+_228678550_228678570	0.0820788	ALX1_ARX	ENST00000409189.3|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20 	ENST00000358813.4|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20
hg19_v2_chr1_-_200379180_200379191	0.0816235	ALX1_ARX	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr2_+_12246664_12246710	0.080363	ALX1_ARX	ENST00000449986.1|AC096559.1|ENSG00000224184.1|AC096559.1
hg19_v2_chr5_+_101569696_101569696	0.0797198	ALX1_ARX	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr10_+_134150835_134150852	0.0789347	ALX1_ARX	ENST00000432555.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr5_+_145826867_145826903	0.0768727	ALX1_ARX	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr2_+_36923830_36923874	0.076389	ALX1_ARX	ENST00000379242.3|VIT|ENSG00000205221.8|vitrin 	ENST00000389975.3|VIT|ENSG00000205221.8|vitrin
hg19_v2_chr17_-_39296739_39296798	0.0760641	ALX1_ARX	ENST00000345847.4|KRTAP4-6|ENSG00000198090.3|keratin associated protein 4-6
hg19_v2_chr10_+_18689637_18689742	0.0752829	ALX1_ARX	ENST00000377315.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr7_+_148287657_148287657	0.0750742	ALX1_ARX	ENST00000307003.2|C7orf33|ENSG00000170279.2|chromosome 7 open reading frame 33
hg19_v2_chr4_+_48485341_48485394	0.0748883	ALX1_ARX	ENST00000273861.4|SLC10A4|ENSG00000145248.6|solute carrier family 10, member 4
hg19_v2_chr13_-_47471155_47471214	0.0747837	ALX1_ARX	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr4_+_88754113_88754139	0.0732233	ALX1_ARX	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr4_-_143227088_143227105	0.0730974	ALX1_ARX	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr8_-_122653630_122653661	0.0730525	ALX1_ARX	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr1_+_104615595_104615645	0.0724963	ALX1_ARX	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr7_+_90338712_90338907	0.0719968	ALX1_ARX	ENST00000265741.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14 	ENST00000406263.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr1_+_12976450_12976450	0.0713509	ALX1_ARX	ENST00000361079.2|PRAMEF7|ENSG00000204510.1|PRAME family member 7
hg19_v2_chr3_-_47934234_47934325	0.0707345	ALX1_ARX	ENST00000420772.2|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr7_-_111032971_111032986	0.0699279	ALX1_ARX	ENST00000450877.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr17_+_68071458_68071481	0.0694039	ALX1_ARX	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_-_190167571_190167665	0.0679844	ALX1_ARX	ENST00000354905.2|TMEM207|ENSG00000198398.2|transmembrane protein 207
hg19_v2_chr2_+_36923933_36924020	0.0678819	ALX1_ARX	ENST00000497382.1|VIT|ENSG00000205221.8|vitrin 	ENST00000404084.1|VIT|ENSG00000205221.8|vitrin 	ENST00000379241.3|VIT|ENSG00000205221.8|vitrin 	ENST00000401530.1|VIT|ENSG00000205221.8|vitrin
hg19_v2_chr8_+_77318769_77318889	0.0677855	ALX1_ARX	ENST00000518732.1|RP11-706J10.1|ENSG00000254300.1|long intergenic non-protein coding RNA 1111
hg19_v2_chr6_+_45296391_45296464	0.065995	ALX1_ARX	ENST00000371436.6|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000576263.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr17_+_68071389_68071426	0.0637103	ALX1_ARX	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr15_+_51669444_51669479	0.0620541	ALX1_ARX	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chrX_+_36246735_36246735	0.0610022	ALX1_ARX	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr5_+_59783941_59784066	0.0606384	ALX1_ARX	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr12_-_53601055_53601091	0.0604773	ALX1_ARX	ENST00000552972.1|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000422257.3|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000267082.5|ITGB7|ENSG00000139626.11|integrin, beta 7
hg19_v2_chr4_-_143226979_143226990	0.0599803	ALX1_ARX	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr6_-_107235287_107235310	0.0597339	ALX1_ARX	ENST00000436659.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1	ENST00000428750.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1	ENST00000427903.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1
hg19_v2_chr7_+_143701022_143701022	0.0594681	ALX1_ARX	ENST00000408922.2|OR6B1|ENSG00000221813.2|olfactory receptor, family 6, subfamily B, member 1
hg19_v2_chr15_+_80733570_80733659	0.0590604	ALX1_ARX	ENST00000533983.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2 	ENST00000527771.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2 	ENST00000525103.1|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v2_chr11_-_7847519_7847519	0.0589718	ALX1_ARX	ENST00000328375.1|OR5P3|ENSG00000182334.1|olfactory receptor, family 5, subfamily P, member 3
hg19_v2_chrX_+_149887090_149887149	0.0577109	ALX1_ARX	ENST00000538506.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr6_-_133055815_133055834	0.057069	ALX1_ARX	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr1_-_232651312_232651312	0.0565886	ALX1_ARX	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr17_-_3030875_3030875	0.0562206	ALX1_ARX	ENST00000328890.2|OR1G1|ENSG00000183024.3|olfactory receptor, family 1, subfamily G, member 1
hg19_v2_chr6_-_32908792_32908847	0.0550998	ALX1_ARX	ENST00000418107.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr8_+_67039131_67039176	0.0537642	ALX1_ARX	ENST00000315962.4|TRIM55|ENSG00000147573.12|tripartite motif containing 55 	ENST00000353317.5|TRIM55|ENSG00000147573.12|tripartite motif containing 55
hg19_v2_chr8_-_57123815_57123867	0.0535973	ALX1_ARX	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr14_-_38064198_38064239	0.0529289	ALX1_ARX	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr1_+_206557366_206557368	0.0526031	ALX1_ARX	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr11_+_62496114_62496322	0.0501914	ALX1_ARX	ENST00000532583.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr5_-_87516448_87516544	0.0495705	ALX1_ARX	ENST00000511218.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B
hg19_v2_chr11_+_18433840_18433917	0.0495496	ALX1_ARX	ENST00000541669.1|LDHC|ENSG00000166796.7|lactate dehydrogenase C 	ENST00000280704.4|LDHC|ENSG00000166796.7|lactate dehydrogenase C
hg19_v2_chr1_-_200379129_200379174	0.0487283	ALX1_ARX	ENST00000367353.1|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr4_+_118955500_118955612	0.0479033	ALX1_ARX	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr11_-_111649015_111649030	0.0479008	ALX1_ARX	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr17_-_71228357_71228533	0.0477494	ALX1_ARX	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr12_-_53601000_53601043	0.0468232	ALX1_ARX	ENST00000338737.4|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000549086.2|ITGB7|ENSG00000139626.11|integrin, beta 7
hg19_v2_chr5_+_40909354_40909354	0.0458383	ALX1_ARX	ENST00000313164.9|C7|ENSG00000112936.14|complement component 7
hg19_v2_chr1_-_13390765_13390765	0.0458216	ALX1_ARX	ENST00000357367.2|PRAMEF8|ENSG00000182330.6|PRAME family member 8
hg19_v2_chr7_-_25268104_25268106	0.0455111	ALX1_ARX	ENST00000222674.2|NPVF|ENSG00000105954.2|neuropeptide VF precursor
hg19_v2_chr15_+_42066632_42066722	0.0452577	ALX1_ARX	ENST00000457542.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000221214.6|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000260357.7|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000456763.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1
hg19_v2_chr12_-_125052010_125052172	0.0451406	ALX1_ARX	ENST00000458234.1|NCOR2|ENSG00000196498.9|nuclear receptor corepressor 2
hg19_v2_chr6_-_26199499_26199528	0.0448734	ALX1_ARX	ENST00000377831.5|HIST1H3D|ENSG00000197409.6|histone cluster 1, H3d
hg19_v2_chr1_+_192127578_192127613	0.0447328	ALX1_ARX	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chr4_-_100356551_100356667	0.044369	ALX1_ARX	ENST00000209665.4|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr19_-_38183201_38183225	0.043385	ALX1_ARX	ENST00000590008.1|ZNF781|ENSG00000196381.6|zinc finger protein 781 	ENST00000358582.4|ZNF781|ENSG00000196381.6|zinc finger protein 781
hg19_v2_chr3_-_45837959_45837975	0.0420917	ALX1_ARX	ENST00000353278.4|SLC6A20|ENSG00000163817.11|solute carrier family 6 (proline IMINO transporter), member 20 	ENST00000456124.2|SLC6A20|ENSG00000163817.11|solute carrier family 6 (proline IMINO transporter), member 20
hg19_v2_chr3_-_194188956_194188970	0.0420009	ALX1_ARX	ENST00000256031.4|ATP13A3|ENSG00000133657.10|ATPase type 13A3 	ENST00000446356.1|ATP13A3|ENSG00000133657.10|ATPase type 13A3
hg19_v2_chr3_-_87325728_87325739	0.0404806	ALX1_ARX	ENST00000350375.2|POU1F1|ENSG00000064835.6|POU class 1 homeobox 1
hg19_v2_chr4_+_169013666_169013697	0.0400738	ALX1_ARX	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr3_-_45838011_45838034	0.0398546	ALX1_ARX	ENST00000358525.4|SLC6A20|ENSG00000163817.11|solute carrier family 6 (proline IMINO transporter), member 20 	ENST00000413781.1|SLC6A20|ENSG00000163817.11|solute carrier family 6 (proline IMINO transporter), member 20
hg19_v2_chr14_-_36988882_36988898	0.0390682	ALX1_ARX	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr5_-_27038683_27038700	0.0387806	ALX1_ARX	ENST00000511822.1|CDH9|ENSG00000113100.5|cadherin 9, type 2 (T1-cadherin) 	ENST00000231021.4|CDH9|ENSG00000113100.5|cadherin 9, type 2 (T1-cadherin)
hg19_v2_chr3_+_121774202_121774222	0.0383828	ALX1_ARX	ENST00000469710.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000493101.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000330540.2|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000264468.5|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr17_-_38911580_38911584	0.0382846	ALX1_ARX	ENST00000312150.4|KRT25|ENSG00000204897.6|keratin 25
hg19_v2_chr6_+_26199737_26199754	0.0380848	ALX1_ARX	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr2_+_74685413_74685456	0.0378825	ALX1_ARX	ENST00000233615.2|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr11_-_92931098_92931173	0.0378484	ALX1_ARX	ENST00000326402.4|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr1_+_186798073_186798147	0.0376117	ALX1_ARX	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr5_-_115872142_115872154	0.0374405	ALX1_ARX	ENST00000510263.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr2_-_55496174_55496334	0.0367766	ALX1_ARX	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr16_+_1728257_1728296	0.0364728	ALX1_ARX	ENST00000248098.3|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000562684.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000561516.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382711.5|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000566742.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr6_-_66417107_66417125	0.0351064	ALX1_ARX	ENST00000370621.3|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000370618.3|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000503581.1|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000393380.2|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila)
hg19_v2_chr18_-_13915530_13915540	0.0347996	ALX1_ARX	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr6_-_133055896_133055910	0.0342875	ALX1_ARX	ENST00000367927.5|VNN3|ENSG00000093134.9|vanin 3 	ENST00000425515.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000207771.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000392393.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000450865.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000392394.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr3_-_101039402_101039429	0.0338648	ALX1_ARX	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr18_-_44181442_44181479	0.0333936	ALX1_ARX	ENST00000398722.4|LOXHD1|ENSG00000167210.12|lipoxygenase homology domains 1
hg19_v2_chr19_+_7030589_7030589	0.0331698	ALX1_ARX	ENST00000329753.5|MBD3L5|ENSG00000237247.4|methyl-CpG binding domain protein 3-like 5
hg19_v2_chr12_-_112123524_112123562	0.0331328	ALX1_ARX	ENST00000327551.6|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr4_+_155484155_155484178	0.0322238	ALX1_ARX	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr3_-_87325612_87325654	0.0321721	ALX1_ARX	ENST00000561167.1|POU1F1|ENSG00000064835.6|POU class 1 homeobox 1 	ENST00000560656.1|POU1F1|ENSG00000064835.6|POU class 1 homeobox 1 	ENST00000344265.3|POU1F1|ENSG00000064835.6|POU class 1 homeobox 1
hg19_v2_chr4_+_88571429_88571459	0.0318492	ALX1_ARX	ENST00000339673.6|DMP1|ENSG00000152592.9|dentin matrix acidic phosphoprotein 1 	ENST00000282479.7|DMP1|ENSG00000152592.9|dentin matrix acidic phosphoprotein 1
hg19_v2_chr2_+_58655461_58655492	0.0315947	ALX1_ARX	ENST00000429095.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000429664.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000452840.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr5_+_140227357_140227357	0.030154	ALX1_ARX	ENST00000378122.3|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr4_+_74347400_74347479	0.0296193	ALX1_ARX	ENST00000226355.3|AFM|ENSG00000079557.3|afamin
hg19_v2_chr6_+_31895254_31895274	0.0282487	ALX1_ARX	ENST00000299367.5|C2|ENSG00000166278.10|complement component 2 	ENST00000442278.2|C2|ENSG00000166278.10|complement component 2
hg19_v2_chr3_-_3151664_3151684	0.0277005	ALX1_ARX	ENST00000256452.3|IL5RA|ENSG00000091181.15|interleukin 5 receptor, alpha 	ENST00000311981.8|IL5RA|ENSG00000091181.15|interleukin 5 receptor, alpha 	ENST00000430514.2|IL5RA|ENSG00000091181.15|interleukin 5 receptor, alpha 	ENST00000456302.1|IL5RA|ENSG00000091181.15|interleukin 5 receptor, alpha
hg19_v2_chr3_+_111393501_111393538	0.0266415	ALX1_ARX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr12_+_122241928_122242086	0.0265924	ALX1_ARX	ENST00000604567.1|SETD1B|ENSG00000139718.6|SET domain containing 1B 	ENST00000542440.1|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr2_+_75873902_75873932	0.0263502	ALX1_ARX	ENST00000393909.2|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19 	ENST00000358788.6|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19 	ENST00000409374.1|MRPL19|ENSG00000115364.9|mitochondrial ribosomal protein L19
hg19_v2_chr4_+_113568207_113568367	0.0262614	ALX1_ARX	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr6_-_137314371_137314394	0.0260034	ALX1_ARX	ENST00000432330.1|RP11-55K22.5|ENSG00000225391.1|RP11-55K22.5	ENST00000418699.1|RP11-55K22.5|ENSG00000225391.1|RP11-55K22.5
hg19_v2_chr3_-_186262166_186262240	0.0257909	ALX1_ARX	ENST00000307944.5|CRYGS|ENSG00000213139.3|crystallin, gamma S
hg19_v2_chr6_-_26199471_26199494	0.0257417	ALX1_ARX	ENST00000341023.1|HIST1H2AD|ENSG00000196866.2|histone cluster 1, H2ad
hg19_v2_chrX_+_107288197_107288212	0.0252309	ALX1_ARX	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chrX_-_15332665_15332693	0.0252259	ALX1_ARX	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr10_+_89420706_89420712	0.0250978	ALX1_ARX	ENST00000427144.2|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
hg19_v2_chrX_-_15619076_15619137	0.0243853	ALX1_ARX	ENST00000252519.3|ACE2|ENSG00000130234.6|angiotensin I converting enzyme 2
hg19_v2_chr4_-_83765613_83765662	0.0240463	ALX1_ARX	ENST00000503937.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr3_+_155860751_155860786	0.0235877	ALX1_ARX	ENST00000471742.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chrX_+_107288239_107288259	0.0231335	ALX1_ARX	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chrX_+_16668278_16668282	0.0229251	ALX1_ARX	ENST00000380200.3|S100G|ENSG00000169906.5|S100 calcium binding protein G
hg19_v2_chrX_+_119737806_119737835	0.0222152	ALX1_ARX	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chr3_-_32544900_32544900	0.0216481	ALX1_ARX	ENST00000205636.3|CMTM6|ENSG00000091317.7|CKLF-like MARVEL transmembrane domain containing 6
hg19_v2_chr10_-_75226166_75226169	0.0214225	ALX1_ARX	ENST00000544628.1|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr9_+_42671887_42671887	0.0213932	ALX1_ARX	ENST00000456520.1|CBWD7|ENSG00000215126.6|COBW domain containing 7 	ENST00000377391.3|CBWD7|ENSG00000215126.6|COBW domain containing 7
hg19_v2_chr15_+_44092784_44092823	0.0212456	ALX1_ARX	ENST00000458412.1|HYPK|ENSG00000242028.1|huntingtin interacting protein K
hg19_v2_chr4_+_54927213_54927213	0.021024	ALX1_ARX	ENST00000595906.1|AC110792.1|ENSG00000269506.1|HCG2027126; Uncharacterized protein
hg19_v2_chr9_+_77230499_77230516	0.0209038	ALX1_ARX	ENST00000396204.2|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr2_+_161993412_161993453	0.0206814	ALX1_ARX	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr8_-_86253888_86253944	0.0206503	ALX1_ARX	ENST00000522389.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000432364.2|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517618.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr6_-_150067696_150067814	0.0205865	ALX1_ARX	ENST00000340413.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367403.3|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr21_-_43346790_43346823	0.0202229	ALX1_ARX	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chrX_-_48858667_48858680	0.0199138	ALX1_ARX	ENST00000376423.4|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376441.1|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr10_-_29923893_29923907	0.0190429	ALX1_ARX	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr1_+_158323755_158323779	0.0187698	ALX1_ARX	ENST00000368157.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368156.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368155.3|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368154.1|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368160.3|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368161.3|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chr5_+_137203465_137203480	0.0183683	ALX1_ARX	ENST00000239926.4|MYOT|ENSG00000120729.5|myotilin
hg19_v2_chrX_-_48858630_48858660	0.0182698	ALX1_ARX	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr10_-_102989551_102989551	0.0181556	ALX1_ARX	ENST00000370193.2|LBX1|ENSG00000138136.5|ladybird homeobox 1
hg19_v2_chr9_-_95298314_95298340	0.0176346	ALX1_ARX	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr11_+_113779704_113779727	0.0174844	ALX1_ARX	ENST00000537778.1|HTR3B|ENSG00000149305.2|5-hydroxytryptamine (serotonin) receptor 3B, ionotropic
hg19_v2_chr4_+_156824840_156824858	0.0169738	ALX1_ARX	ENST00000536354.2|TDO2|ENSG00000151790.4|tryptophan 2,3-dioxygenase
hg19_v2_chr8_+_7353368_7353368	0.0167748	ALX1_ARX	ENST00000355602.2|DEFB107B|ENSG00000198129.2|defensin, beta 107B
hg19_v2_chr11_-_124190184_124190184	0.0164747	ALX1_ARX	ENST00000357438.2|OR8D2|ENSG00000197263.2|olfactory receptor, family 8, subfamily D, member 2
hg19_v2_chr9_+_44867571_44867571	0.0162932	ALX1_ARX	ENST00000377548.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr14_-_81893734_81893794	0.0158144	ALX1_ARX	ENST00000555447.1|STON2|ENSG00000140022.5|stonin 2
hg19_v2_chr4_-_89951028_89951062	0.0148014	ALX1_ARX	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr4_-_176733897_176733906	0.0142516	ALX1_ARX	ENST00000393658.2|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr4_+_95376396_95376421	0.0139662	ALX1_ARX	ENST00000508216.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000514743.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chr19_+_7049332_7049332	0.01371	ALX1_ARX	ENST00000381393.3|MBD3L2|ENSG00000230522.3|methyl-CpG binding domain protein 3-like 2
hg19_v2_chr15_-_34331243_34331429	0.0134457	ALX1_ARX	ENST00000306730.3|AVEN|ENSG00000169857.3|apoptosis, caspase activation inhibitor
hg19_v2_chr2_-_70529180_70529222	0.0131084	ALX1_ARX	ENST00000450256.1|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A 	ENST00000037869.3|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A
hg19_v2_chr3_-_167191814_167191842	0.0130611	ALX1_ARX	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr7_+_138915102_138915102	0.0128489	ALX1_ARX	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr7_-_140482926_140482957	0.0128284	ALX1_ARX	ENST00000496384.2|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chrX_+_30248553_30248553	0.0127497	ALX1_ARX	ENST00000361644.2|MAGEB3|ENSG00000198798.4|melanoma antigen family B, 3
hg19_v2_chr7_+_93535817_93535822	0.0123555	ALX1_ARX	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr8_-_26724784_26724800	0.0118794	ALX1_ARX	ENST00000380573.3|ADRA1A|ENSG00000120907.13|adrenoceptor alpha 1A
hg19_v2_chr10_-_112064665_112064737	0.0117732	ALX1_ARX	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr4_-_83769996_83770031	0.0115273	ALX1_ARX	ENST00000511338.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr13_-_45775162_45775191	0.0102261	ALX1_ARX	ENST00000405872.1|KCTD4|ENSG00000180332.5|potassium channel tetramerization domain containing 4
hg19_v2_chr3_+_39424828_39424918	0.00958508	ALX1_ARX	ENST00000273158.4|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38 	ENST00000431510.1|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38
hg19_v2_chr8_-_102803163_102803211	0.00957331	ALX1_ARX	ENST00000523645.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000520346.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000220931.6|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522448.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522951.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522252.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000519098.1|NCALD|ENSG00000104490.13|neurocalcin delta
hg19_v2_chr3_+_138340067_138340080	0.00950581	ALX1_ARX	ENST00000479848.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr6_-_32908765_32908786	0.00928089	ALX1_ARX	ENST00000416244.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr5_+_140079919_140080042	0.0092719	ALX1_ARX	ENST00000274712.3|ZMAT2|ENSG00000146007.6|zinc finger, matrin-type 2
hg19_v2_chr3_+_138340049_138340056	0.0091857	ALX1_ARX	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr4_-_174320687_174320687	0.0091639	ALX1_ARX	ENST00000296506.3|SCRG1|ENSG00000164106.3|stimulator of chondrogenesis 1
hg19_v2_chr1_+_186265399_186265414	0.00754283	ALX1_ARX	ENST00000367486.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367484.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000533951.1|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367482.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367483.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367485.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000445192.2|PRG4|ENSG00000116690.7|proteoglycan 4
hg19_v2_chr5_-_39270725_39270771	0.00710538	ALX1_ARX	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr14_+_24099318_24099333	0.00688085	ALX1_ARX	ENST00000432832.2|DHRS2|ENSG00000100867.10|dehydrogenase/reductase (SDR family) member 2
hg19_v2_chr4_+_155484103_155484147	0.00674689	ALX1_ARX	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr1_+_44679113_44679152	0.006737	ALX1_ARX	ENST00000361745.6|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000446292.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000440641.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000436069.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000437511.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr1_-_152131703_152131706	0.00581505	ALX1_ARX	ENST00000316073.3|RPTN|ENSG00000215853.3|repetin
hg19_v2_chr12_+_10163231_10163363	0.00578538	ALX1_ARX	ENST00000396502.1|CLEC12B|ENSG00000256660.1|C-type lectin domain family 12, member B 	ENST00000338896.5|CLEC12B|ENSG00000256660.1|C-type lectin domain family 12, member B
hg19_v2_chr4_+_95128748_95128794	0.00578041	ALX1_ARX	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chrX_+_11311533_11311533	0.0057047	ALX1_ARX	ENST00000380714.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000380712.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000348912.4|AMELX|ENSG00000125363.10|amelogenin, X-linked
hg19_v2_chr6_+_3259148_3259294	0.00565887	ALX1_ARX	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr12_-_57873631_57873672	0.0054938	ALX1_ARX	ENST00000393791.3|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000356411.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000552249.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr4_-_122854612_122854612	0.00548665	ALX1_ARX	ENST00000264811.5|TRPC3|ENSG00000138741.6|transient receptor potential cation channel, subfamily C, member 3
hg19_v2_chr11_-_95522907_95522989	0.00536692	ALX1_ARX	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr9_-_27005686_27005695	0.00527923	ALX1_ARX	ENST00000380055.5|LRRC19|ENSG00000184434.7|leucine rich repeat containing 19
hg19_v2_chr8_+_38677850_38678065	0.00511223	ALX1_ARX	ENST00000518809.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520611.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr7_-_7575477_7575491	0.00499604	ALX1_ARX	ENST00000399429.3|COL28A1|ENSG00000215018.5|collagen, type XXVIII, alpha 1
hg19_v2_chr16_+_24549014_24549082	0.00469585	ALX1_ARX	ENST00000564314.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6 	ENST00000567686.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6
hg19_v2_chr12_-_57873329_57873429	0.00398199	ALX1_ARX	ENST00000424809.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr1_+_154401791_154401819	0.00350253	ALX1_ARX	ENST00000476006.1|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr8_-_91095099_91095113	0.00339991	ALX1_ARX	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr11_+_85359062_85359073	0.00333098	ALX1_ARX	ENST00000532180.1|TMEM126A|ENSG00000171202.2|transmembrane protein 126A
hg19_v2_chr19_-_54619006_54619055	0.00305764	ALX1_ARX	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr1_+_180601139_180601180	0.00303845	ALX1_ARX	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr11_+_120973375_120973375	0.0021556	ALX1_ARX	ENST00000264037.2|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr4_+_95128996_95129056	0.00122578	ALX1_ARX	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr4_-_139051839_139051863	0.000734719	ALX1_ARX	ENST00000514600.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000513895.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000512536.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616
hg19_v2_chr11_+_85359002_85359038	0.000733019	ALX1_ARX	ENST00000528105.1|TMEM126A|ENSG00000171202.2|transmembrane protein 126A 	ENST00000304511.2|TMEM126A|ENSG00000171202.2|transmembrane protein 126A
hg19_v2_chr2_+_65215604_65215625	0.000348571	ALX1_ARX	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chrX_-_138724994_138725023	0.000340265	ALX1_ARX	ENST00000536274.1|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence
hg19_v2_chr9_+_135854091_135854159	0.00018613	ALX1_ARX	ENST00000450530.1|GFI1B|ENSG00000165702.8|growth factor independent 1B transcription repressor 	ENST00000534944.1|GFI1B|ENSG00000165702.8|growth factor independent 1B transcription repressor
