hg19_v2_chr6_-_29527702_29527702	0.577998	CAGUCCA	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr3_-_79068594_79068627	0.28098	CAGUCCA	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr4_-_177713788_177713881	0.24527	CAGUCCA	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr8_+_22224811_22224822	0.203609	CAGUCCA	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr5_-_115910630_115910657	0.174505	CAGUCCA	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr11_+_118307179_118307228	0.132478	CAGUCCA	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr11_-_134281812_134281828	0.130303	CAGUCCA	ENST00000392580.1|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENST00000312527.4|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v2_chr1_-_41131326_41131400	0.12891	CAGUCCA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr11_-_9286921_9286937	0.123558	CAGUCCA	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chrX_-_152939252_152939300	0.114917	CAGUCCA	ENST00000340888.3|PNCK|ENSG00000130822.11|pregnancy up-regulated nonubiquitous CaM kinase
hg19_v2_chr5_+_65018017_65018088	0.113227	CAGUCCA	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr18_-_70210764_70210794	0.110897	CAGUCCA	ENST00000585159.1|CBLN2|ENSG00000141668.5|cerebellin 2 precursor 	ENST00000584764.1|CBLN2|ENSG00000141668.5|cerebellin 2 precursor
hg19_v2_chr9_+_109625378_109625458	0.110656	CAGUCCA	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr20_-_3996036_3996153	0.101288	CAGUCCA	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr1_+_27153173_27153230	0.0959478	CAGUCCA	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr6_+_123317116_123317260	0.0925592	CAGUCCA	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr3_+_183903811_183903996	0.0920888	CAGUCCA	ENST00000429586.2|ABCF3|ENSG00000161204.7|ATP-binding cassette, sub-family F (GCN20), member 3 	ENST00000292808.5|ABCF3|ENSG00000161204.7|ATP-binding cassette, sub-family F (GCN20), member 3
hg19_v2_chr3_-_11762202_11762226	0.0807988	CAGUCCA	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr22_+_39101728_39101763	0.0801353	CAGUCCA	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr3_+_9773409_9773479	0.0799188	CAGUCCA	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr1_-_146644122_146644176	0.077303	CAGUCCA	ENST00000254101.3|PRKAB2|ENSG00000131791.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg19_v2_chr14_-_53258314_53258418	0.0771946	CAGUCCA	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr15_-_100273544_100273649	0.0732047	CAGUCCA	ENST00000409796.1|LYSMD4|ENSG00000183060.11|LysM, putative peptidoglycan-binding, domain containing 4 	ENST00000545021.1|LYSMD4|ENSG00000183060.11|LysM, putative peptidoglycan-binding, domain containing 4 	ENST00000344791.2|LYSMD4|ENSG00000183060.11|LysM, putative peptidoglycan-binding, domain containing 4 	ENST00000332728.4|LYSMD4|ENSG00000183060.11|LysM, putative peptidoglycan-binding, domain containing 4 	ENST00000450512.1|LYSMD4|ENSG00000183060.11|LysM, putative peptidoglycan-binding, domain containing 4
hg19_v2_chrX_-_83757399_83757487	0.0729244	CAGUCCA	ENST00000373177.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000297977.5|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000506585.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000449553.2|HDX|ENSG00000165259.9|highly divergent homeobox
hg19_v2_chr5_-_76935513_76935513	0.0727192	CAGUCCA	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr19_+_49622646_49622699	0.0711311	CAGUCCA	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr1_-_149982624_149982719	0.0702669	CAGUCCA	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr10_-_60027642_60027705	0.0659145	CAGUCCA	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr13_+_88324870_88324870	0.065679	CAGUCCA	ENST00000325089.6|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr20_-_48532019_48532045	0.0651852	CAGUCCA	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr2_-_225450013_225450068	0.0649334	CAGUCCA	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr3_-_50540854_50540887	0.0647906	CAGUCCA	ENST00000423994.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000424201.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000479441.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000429770.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg19_v2_chr16_+_30935418_30935418	0.0646583	CAGUCCA	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr18_-_19180681_19180711	0.0640352	CAGUCCA	ENST00000269214.5|ESCO1|ENSG00000141446.6|establishment of sister chromatid cohesion N-acetyltransferase 1
hg19_v2_chr4_+_39699664_39699772	0.0632419	CAGUCCA	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr3_+_137906109_137906153	0.062511	CAGUCCA	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr17_+_38375574_38375615	0.0600592	CAGUCCA	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr22_+_45559722_45559881	0.0584487	CAGUCCA	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr15_-_75871589_75871676	0.0584231	CAGUCCA	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr8_-_103876965_103877012	0.0582987	CAGUCCA	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr11_+_64126614_64126665	0.0581265	CAGUCCA	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr6_+_118228657_118228715	0.058025	CAGUCCA	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr9_+_126773880_126773895	0.0575971	CAGUCCA	ENST00000373615.4|LHX2|ENSG00000106689.6|LIM homeobox 2
hg19_v2_chr17_-_39471947_39471963	0.0572639	CAGUCCA	ENST00000334202.3|KRTAP17-1|ENSG00000186860.3|keratin associated protein 17-1
hg19_v2_chr1_+_244214577_244214593	0.056558	CAGUCCA	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr11_-_116643688_116643719	0.0556187	CAGUCCA	ENST00000375445.3|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae) 	ENST00000260210.4|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae)
hg19_v2_chr14_+_23775971_23776000	0.0551138	CAGUCCA	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr4_+_184826418_184826522	0.0547034	CAGUCCA	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr5_+_67511524_67511628	0.0542476	CAGUCCA	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr15_+_89346657_89346674	0.0536201	CAGUCCA	ENST00000439576.2|ACAN|ENSG00000157766.11|aggrecan
hg19_v2_chr17_-_7120525_7120666	0.053102	CAGUCCA	ENST00000447163.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000399506.2|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000302955.6|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
hg19_v2_chr3_+_38495333_38495422	0.0527995	CAGUCCA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr1_-_40367530_40367597	0.0495503	CAGUCCA	ENST00000372816.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000372815.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr6_-_10415470_10415508	0.049386	CAGUCCA	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr2_-_61765315_61765422	0.0486322	CAGUCCA	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr14_+_65171099_65171210	0.04831	CAGUCCA	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr11_-_45307817_45307898	0.0479279	CAGUCCA	ENST00000020926.3|SYT13|ENSG00000019505.3|synaptotagmin XIII
hg19_v2_chr11_-_118305921_118305921	0.0478791	CAGUCCA	ENST00000532619.1|RP11-770J1.4|ENSG00000255384.1|RP11-770J1.4
hg19_v2_chr3_-_37034702_37034795	0.0462189	CAGUCCA	ENST00000322716.5|EPM2AIP1|ENSG00000178567.5|EPM2A (laforin) interacting protein 1
hg19_v2_chr2_+_105471969_105471969	0.0462067	CAGUCCA	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr9_+_132565418_132565444	0.0460226	CAGUCCA	ENST00000259339.2|TOR1B|ENSG00000136816.11|torsin family 1, member B (torsin B)
hg19_v2_chr10_+_98592009_98592061	0.0458998	CAGUCCA	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr4_+_184020398_184020463	0.0449132	CAGUCCA	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr1_-_38325256_38325292	0.0442391	CAGUCCA	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr15_+_62853562_62853614	0.0438401	CAGUCCA	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chrX_+_154997474_154997474	0.0424573	CAGUCCA	ENST00000302805.2|SPRY3|ENSG00000168939.6|sprouty homolog 3 (Drosophila)
hg19_v2_chr11_-_35440796_35440916	0.0424011	CAGUCCA	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr1_+_75594119_75594119	0.0416914	CAGUCCA	ENST00000294638.5|LHX8|ENSG00000162624.10|LIM homeobox 8
hg19_v2_chrX_-_25034065_25034088	0.0411285	CAGUCCA	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr21_-_36260980_36261011	0.0408947	CAGUCCA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr3_+_196295482_196295559	0.0396591	CAGUCCA	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chrX_+_69664706_69664819	0.0378566	CAGUCCA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr5_-_159546396_159546470	0.0374792	CAGUCCA	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr9_+_133710453_133710453	0.0369015	CAGUCCA	ENST00000318560.5|ABL1|ENSG00000097007.13|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v2_chr15_+_41952591_41952672	0.0367746	CAGUCCA	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr6_-_28891709_28891769	0.0365856	CAGUCCA	ENST00000377194.3|TRIM27|ENSG00000204713.6|tripartite motif containing 27 	ENST00000377199.3|TRIM27|ENSG00000204713.6|tripartite motif containing 27
hg19_v2_chr16_+_9185450_9185516	0.0361019	CAGUCCA	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr11_-_79151695_79151710	0.0349677	CAGUCCA	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr8_+_77593448_77593471	0.0343923	CAGUCCA	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr3_-_132004251_132004258	0.0340792	CAGUCCA	ENST00000512055.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chrX_+_100474711_100474758	0.0340578	CAGUCCA	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chrX_+_122993827_122993910	0.0340371	CAGUCCA	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr16_-_18937726_18937776	0.0339749	CAGUCCA	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr6_-_42419649_42419789	0.0338699	CAGUCCA	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr4_+_124320665_124320702	0.033848	CAGUCCA	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr10_+_31608054_31608156	0.0329601	CAGUCCA	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr14_+_57857262_57857334	0.0327972	CAGUCCA	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr17_-_48943706_48943723	0.0324658	CAGUCCA	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr16_-_79634595_79634620	0.0319738	CAGUCCA	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr13_+_42622781_42622889	0.031011	CAGUCCA	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr3_-_122233723_122233797	0.0305962	CAGUCCA	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr10_-_71930222_71930280	0.0301707	CAGUCCA	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr1_+_107683644_107683673	0.0301251	CAGUCCA	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr13_-_50367057_50367142	0.0294876	CAGUCCA	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr8_-_91997427_91997504	0.0292099	CAGUCCA	ENST00000517562.2|RP11-122A3.2|ENSG00000253250.2|chromosome 8 open reading frame 88
hg19_v2_chr11_+_14665263_14665274	0.0289439	CAGUCCA	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr19_+_19496624_19496660	0.028908	CAGUCCA	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr1_+_11072696_11072735	0.0285878	CAGUCCA	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr17_-_73851285_73851501	0.0279907	CAGUCCA	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr15_+_41851211_41851232	0.0279846	CAGUCCA	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr17_+_27055798_27055828	0.0277672	CAGUCCA	ENST00000268766.6|NEK8|ENSG00000160602.9|NIMA-related kinase 8
hg19_v2_chr19_-_43969796_43969813	0.027486	CAGUCCA	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr22_-_32808194_32808245	0.0274209	CAGUCCA	ENST00000451746.2|RTCB|ENSG00000100220.7|RNA 2',3'-cyclic phosphate and 5'-OH ligase 	ENST00000216038.5|RTCB|ENSG00000100220.7|RNA 2',3'-cyclic phosphate and 5'-OH ligase
hg19_v2_chr10_+_88516396_88516426	0.0266242	CAGUCCA	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr7_-_75988321_75988348	0.0265747	CAGUCCA	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr19_+_7598890_7599090	0.0258862	CAGUCCA	ENST00000221249.6|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601668.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601001.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr19_-_40931891_40931932	0.0258833	CAGUCCA	ENST00000357949.4|SERTAD1|ENSG00000197019.4|SERTA domain containing 1
hg19_v2_chrX_+_16804544_16804613	0.0256406	CAGUCCA	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr12_+_54447637_54447661	0.0254499	CAGUCCA	ENST00000609810.1|HOXC4|ENSG00000198353.6|homeobox C4 	ENST00000430889.2|HOXC4|ENSG00000273266.1|Homeobox protein Hox-C4
hg19_v2_chr19_-_19739007_19739051	0.0249681	CAGUCCA	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr22_+_31556134_31556263	0.0248297	CAGUCCA	ENST00000426256.2|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000326132.6|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000266252.7|RNF185|ENSG00000138942.11|ring finger protein 185
hg19_v2_chr11_-_118966167_118966182	0.0242761	CAGUCCA	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr12_+_56511943_56512191	0.0241157	CAGUCCA	ENST00000257940.2|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551790.1|ESYT1|ENSG00000139641.8|extended synaptotagmin-like protein 1 	ENST00000552345.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551880.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000546903.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10
hg19_v2_chr2_+_85360499_85360598	0.0239409	CAGUCCA	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr2_-_25475120_25475180	0.0231993	CAGUCCA	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr12_-_76953284_76953341	0.0230462	CAGUCCA	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr12_+_95611516_95611527	0.0224664	CAGUCCA	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr7_+_73242069_73242082	0.021801	CAGUCCA	ENST00000435050.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr17_-_46671323_46671323	0.0218005	CAGUCCA	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr13_+_25946201_25946215	0.0213945	CAGUCCA	ENST00000381655.2|ATP8A2|ENSG00000132932.12|ATPase, aminophospholipid transporter, class I, type 8A, member 2
hg19_v2_chr8_-_122653630_122653661	0.0203468	CAGUCCA	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr15_-_35047166_35047204	0.0197981	CAGUCCA	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr7_+_88388628_88388682	0.0197831	CAGUCCA	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr3_-_182698381_182698431	0.0190785	CAGUCCA	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr19_-_46296011_46296061	0.0188344	CAGUCCA	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr2_-_172290482_172290596	0.0177583	CAGUCCA	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr1_+_33283043_33283198	0.0162793	CAGUCCA	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr3_-_48700310_48700348	0.0162094	CAGUCCA	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr2_+_219081817_219081933	0.0159522	CAGUCCA	ENST00000315717.5|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000420104.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000295685.10|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr7_+_69064300_69064342	0.0146041	CAGUCCA	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr2_+_232651124_232651176	0.0143814	CAGUCCA	ENST00000350033.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000412591.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000410017.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000373608.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B
hg19_v2_chr10_-_120514720_120514758	0.0143756	CAGUCCA	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr17_-_8066250_8066301	0.0132385	CAGUCCA	ENST00000488857.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000481878.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000498285.1|RP11-599B13.6|ENSG00000263620.1|Uncharacterized protein  	ENST00000316509.6|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2)
hg19_v2_chr8_-_82395461_82395498	0.012971	CAGUCCA	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr14_+_58666824_58666902	0.0128	CAGUCCA	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr6_+_76458909_76458934	0.0125318	CAGUCCA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr1_-_37499726_37499850	0.0122743	CAGUCCA	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr15_+_49715293_49715448	0.0122481	CAGUCCA	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr17_+_56160768_56160786	0.0115046	CAGUCCA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr1_-_153950164_153950184	0.0114483	CAGUCCA	ENST00000271843.4|JTB|ENSG00000143543.10|jumping translocation breakpoint
hg19_v2_chr20_-_30795511_30795594	0.011416	CAGUCCA	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr17_+_36508111_36508128	0.0114143	CAGUCCA	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr12_+_68042495_68042508	0.0106905	CAGUCCA	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr8_+_22409193_22409215	0.010233	CAGUCCA	ENST00000240123.7|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr9_+_4679555_4679617	0.00932906	CAGUCCA	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr2_+_153191706_153191751	0.00820615	CAGUCCA	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr2_-_69870835_69870853	0.00808803	CAGUCCA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr9_+_100745615_100745648	0.00801385	CAGUCCA	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chr2_-_131850951_131851065	0.00705634	CAGUCCA	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr7_-_152133059_152133102	0.0065301	CAGUCCA	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr11_+_125439298_125439385	0.00644534	CAGUCCA	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chr6_-_33168391_33168465	0.00560431	CAGUCCA	ENST00000374685.4|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000413614.2|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000374680.3|RXRB|ENSG00000204231.6|retinoid X receptor, beta
hg19_v2_chr12_+_98987369_98987503	0.00536413	CAGUCCA	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr5_+_179921430_179921461	0.00531093	CAGUCCA	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr2_+_179345173_179345221	0.00527304	CAGUCCA	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr9_+_103235365_103235419	0.00505066	CAGUCCA	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr1_-_17766198_17766232	0.00479869	CAGUCCA	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr3_-_128902729_128902753	0.00450134	CAGUCCA	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr14_-_64010046_64010107	0.00434879	CAGUCCA	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr18_-_45456930_45456970	0.00382826	CAGUCCA	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr3_-_178984759_178984790	0.00381427	CAGUCCA	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chrX_+_48554986_48555164	0.0036753	CAGUCCA	ENST00000376687.3|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila) 	ENST00000453214.2|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila)
hg19_v2_chr15_-_65809581_65809617	0.00359188	CAGUCCA	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr12_+_130646999_130647019	0.00346427	CAGUCCA	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr11_-_129062093_129062184	0.00337813	CAGUCCA	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr11_-_118047376_118047388	0.00334684	CAGUCCA	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr18_-_29522989_29523104	0.00332342	CAGUCCA	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr14_-_100070363_100070467	0.00304321	CAGUCCA	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr15_+_44719394_44719579	0.00283128	CAGUCCA	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr9_-_104145795_104145806	0.00238263	CAGUCCA	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr6_-_114292449_114292474	0.00185914	CAGUCCA	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr8_+_67579807_67579887	0.0010714	CAGUCCA	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr12_-_110841462_110841540	0.00099202	CAGUCCA	ENST00000455511.3|ANAPC7|ENSG00000196510.8|anaphase promoting complex subunit 7 	ENST00000450008.2|ANAPC7|ENSG00000196510.8|anaphase promoting complex subunit 7
hg19_v2_chr11_-_31839488_31839515	0.000821277	CAGUCCA	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr2_+_27440229_27440280	0.000502863	CAGUCCA	ENST00000264705.4|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENST00000403525.1|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v2_chr17_+_57697216_57697235	0.000306859	CAGUCCA	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr22_-_39096661_39096681	0.000226874	CAGUCCA	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
