hg19_v2_chr4_+_134070439_134070470	0.220786	CCACAGG	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr1_-_209979375_209979389	0.215153	CCACAGG	ENST00000367021.3|IRF6|ENSG00000117595.6|interferon regulatory factor 6
hg19_v2_chr13_-_72441315_72441454	0.17315	CCACAGG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr8_-_81787006_81787031	0.159675	CCACAGG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr1_-_92351769_92351787	0.154645	CCACAGG	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr12_+_20522179_20522203	0.153735	CCACAGG	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr1_-_236228403_236228414	0.128156	CCACAGG	ENST00000366595.3|NID1|ENSG00000116962.10|nidogen 1
hg19_v2_chr1_-_228135599_228135640	0.122778	CCACAGG	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr6_-_130031358_130031378	0.122567	CCACAGG	ENST00000368149.2|ARHGAP18|ENSG00000146376.6|Rho GTPase activating protein 18
hg19_v2_chr22_+_51112800_51112852	0.122262	CCACAGG	ENST00000414786.2|SHANK3|ENSG00000251322.3|SH3 and multiple ankyrin repeat domains 3
hg19_v2_chr4_-_90758227_90758379	0.115425	CCACAGG	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr9_-_14314066_14314075	0.109905	CCACAGG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr10_+_63661053_63661079	0.109426	CCACAGG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr2_-_136873735_136873813	0.108291	CCACAGG	ENST00000409817.1|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr1_+_145524891_145525012	0.0973947	CCACAGG	ENST00000369304.3|ITGA10|ENSG00000143127.8|integrin, alpha 10
hg19_v2_chr11_-_82782861_82782949	0.0968674	CCACAGG	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr1_+_82266053_82266082	0.0957927	CCACAGG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr1_+_178694300_178694346	0.0946324	CCACAGG	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr12_-_96184533_96184549	0.0879341	CCACAGG	ENST00000343702.4|NTN4|ENSG00000074527.7|netrin 4 	ENST00000344911.4|NTN4|ENSG00000074527.7|netrin 4
hg19_v2_chr11_+_12695944_12695989	0.0841861	CCACAGG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr17_+_61699766_61699826	0.0753477	CCACAGG	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr7_-_132261253_132261323	0.0752394	CCACAGG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr2_+_33359687_33359724	0.0745211	CCACAGG	ENST00000402934.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000404525.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000407925.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1
hg19_v2_chr2_-_43453734_43453751	0.0735713	CCACAGG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr20_-_50384864_50384943	0.0716584	CCACAGG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr1_-_17304771_17304825	0.0672585	CCACAGG	ENST00000375534.3|MFAP2|ENSG00000117122.9|microfibrillar-associated protein 2
hg19_v2_chr9_-_107690420_107690518	0.0642368	CCACAGG	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr3_-_171178157_171178225	0.0640888	CCACAGG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_+_60704762_60704762	0.0612703	CCACAGG	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr19_+_34745442_34745502	0.0611609	CCACAGG	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr7_+_94139105_94139197	0.0581106	CCACAGG	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr17_-_61523535_61523559	0.0573503	CCACAGG	ENST00000584031.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000392976.1|CYB561|ENSG00000008283.11|cytochrome b561
hg19_v2_chr3_-_32022733_32022809	0.0554567	CCACAGG	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr3_-_18466787_18466861	0.0549011	CCACAGG	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr1_-_16678914_16678989	0.0547087	CCACAGG	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr20_+_10199468_10199516	0.0544733	CCACAGG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr17_+_47865917_47866068	0.0542727	CCACAGG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr10_+_99344104_99344152	0.0520648	CCACAGG	ENST00000555577.1|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha 	ENST00000370649.3|PI4K2A|ENSG00000249967.1|Phosphatidylinositol 4-kinase type 2-alpha; Uncharacterized protein
hg19_v2_chr16_+_70332956_70333130	0.0508481	CCACAGG	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr5_-_43313574_43313614	0.0462926	CCACAGG	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr5_-_39425068_39425098	0.0454743	CCACAGG	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr18_+_13218769_13218792	0.0437309	CCACAGG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr19_-_14316980_14316999	0.0436462	CCACAGG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr6_+_24495067_24495096	0.0427555	CCACAGG	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr17_+_42634844_42634925	0.0415991	CCACAGG	ENST00000315323.3|FZD2|ENSG00000180340.5|frizzled family receptor 2
hg19_v2_chr4_+_145567173_145567296	0.0415672	CCACAGG	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr17_+_73452545_73452685	0.0410735	CCACAGG	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr14_-_30396948_30396998	0.0406487	CCACAGG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr18_-_53255766_53255860	0.0402408	CCACAGG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_-_109940550_109940573	0.0398367	CCACAGG	ENST00000256637.6|SORT1|ENSG00000134243.7|sortilin 1
hg19_v2_chr20_+_306221_306239	0.0395871	CCACAGG	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr2_+_238536207_238536290	0.0394212	CCACAGG	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr12_+_74931551_74931656	0.0384609	CCACAGG	ENST00000519948.2|ATXN7L3B|ENSG00000253719.2|ataxin 7-like 3B
hg19_v2_chr9_+_92219919_92219953	0.0376991	CCACAGG	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr1_+_203595903_203595934	0.0374765	CCACAGG	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr15_-_37390482_37390572	0.0374321	CCACAGG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr9_+_82186872_82186898	0.0372617	CCACAGG	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr3_+_14860469_14860469	0.0362109	CCACAGG	ENST00000285046.5|FGD5|ENSG00000154783.6|FYVE, RhoGEF and PH domain containing 5
hg19_v2_chr14_-_21905395_21905419	0.0361953	CCACAGG	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr7_+_94285637_94285689	0.035525	CCACAGG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr1_+_155290677_155290753	0.0354304	CCACAGG	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr1_-_151319710_151319833	0.0353755	CCACAGG	ENST00000290524.4|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000437327.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452513.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000368870.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452671.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr7_+_106809406_106809460	0.0349979	CCACAGG	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr12_-_12419703_12419811	0.0346305	CCACAGG	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr19_-_14629224_14629262	0.0338227	CCACAGG	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr16_+_3019246_3019304	0.0330807	CCACAGG	ENST00000318782.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV 	ENST00000293978.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr3_-_114790179_114790222	0.0326311	CCACAGG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr10_-_75634260_75634321	0.03197	CCACAGG	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr12_-_49110613_49110681	0.0314801	CCACAGG	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr19_-_47616992_47617011	0.0309513	CCACAGG	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr14_-_39901618_39901704	0.0307359	CCACAGG	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr14_+_56585048_56585150	0.0303652	CCACAGG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chrX_+_118108571_118108589	0.0303149	CCACAGG	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr9_-_20622478_20622542	0.0299441	CCACAGG	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr7_+_116312411_116312502	0.0296024	CCACAGG	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr5_+_74632993_74633028	0.0295528	CCACAGG	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr10_+_69644404_69644427	0.0288442	CCACAGG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr14_+_23790655_23790680	0.0279989	CCACAGG	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr4_+_47033345_47033377	0.0279782	CCACAGG	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr1_+_78470530_78470551	0.0273773	CCACAGG	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr10_-_126849068_126849138	0.02676	CCACAGG	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr10_+_111967345_111967442	0.0263096	CCACAGG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr16_+_81348528_81348578	0.0259194	CCACAGG	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr3_-_72496035_72496069	0.0251257	CCACAGG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_-_26240357_26240377	0.0248745	CCACAGG	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr15_+_91473403_91473422	0.0246804	CCACAGG	ENST00000394275.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr12_-_82153087_82153138	0.0246453	CCACAGG	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr2_-_200322723_200322819	0.0242609	CCACAGG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr2_+_169312350_169312372	0.0239605	CCACAGG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr11_-_64901978_64902009	0.023715	CCACAGG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chrX_-_134186144_134186228	0.0224354	CCACAGG	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr1_-_225840747_225840860	0.0220839	CCACAGG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr13_+_111365602_111365625	0.0218749	CCACAGG	ENST00000333219.7|ING1|ENSG00000153487.11|inhibitor of growth family, member 1
hg19_v2_chr17_-_62502639_62502849	0.0218577	CCACAGG	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr3_-_44519131_44519186	0.0217134	CCACAGG	ENST00000425708.2|ZNF445|ENSG00000185219.11|zinc finger protein 445 	ENST00000396077.2|ZNF445|ENSG00000185219.11|zinc finger protein 445
hg19_v2_chr1_+_26485511_26485551	0.0214297	CCACAGG	ENST00000374268.3|FAM110D|ENSG00000197245.4|family with sequence similarity 110, member D
hg19_v2_chr14_-_20929624_20929771	0.0212102	CCACAGG	ENST00000398020.4|TMEM55B|ENSG00000165782.6|transmembrane protein 55B 	ENST00000250489.4|TMEM55B|ENSG00000165782.6|transmembrane protein 55B
hg19_v2_chr9_-_33264676_33264761	0.0208462	CCACAGG	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr4_-_185395672_185395734	0.0206402	CCACAGG	ENST00000393593.3|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr5_+_42423872_42424026	0.0203674	CCACAGG	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chr7_+_128864848_128864913	0.0201265	CCACAGG	ENST00000325006.3|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2 	ENST00000446544.2|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr14_+_57046500_57046529	0.0198278	CCACAGG	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr20_+_1875110_1875154	0.0198199	CCACAGG	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr17_+_7452189_7452208	0.0191678	CCACAGG	ENST00000293825.6|TNFSF12|ENSG00000239697.6|tumor necrosis factor (ligand) superfamily, member 12
hg19_v2_chr5_+_102201430_102201478	0.0186085	CCACAGG	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr14_-_64010046_64010107	0.018455	CCACAGG	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr10_-_32636106_32636150	0.0180252	CCACAGG	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr11_-_130786400_130786407	0.017904	CCACAGG	ENST00000265909.4|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chr15_+_91411810_91411828	0.0177289	CCACAGG	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr7_-_139876812_139876860	0.0176371	CCACAGG	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr14_+_23776024_23776105	0.0173654	CCACAGG	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr5_+_152870106_152870188	0.0172901	CCACAGG	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr18_+_18943554_18943587	0.0172898	CCACAGG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr12_+_57916466_57916527	0.0172418	CCACAGG	ENST00000355673.3|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr17_-_42298331_42298361	0.0171629	CCACAGG	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr1_+_52870227_52870243	0.0170216	CCACAGG	ENST00000257181.9|PRPF38A|ENSG00000134748.12|pre-mRNA processing factor 38A
hg19_v2_chr7_-_138666053_138666146	0.0170161	CCACAGG	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr9_+_104296122_104296161	0.0166543	CCACAGG	ENST00000389120.3|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr11_+_65122216_65122238	0.0163474	CCACAGG	ENST00000309880.5|TIGD3|ENSG00000173825.6|tigger transposable element derived 3
hg19_v2_chr4_+_26862400_26862416	0.0159288	CCACAGG	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr19_+_41816053_41816178	0.0158842	CCACAGG	ENST00000269967.3|CCDC97|ENSG00000142039.3|coiled-coil domain containing 97
hg19_v2_chr20_-_4982132_4982164	0.0157891	CCACAGG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr14_-_95786200_95786257	0.0156106	CCACAGG	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chr10_-_126432619_126432663	0.0155764	CCACAGG	ENST00000337318.3|FAM53B|ENSG00000189319.9|family with sequence similarity 53, member B
hg19_v2_chr12_-_117628333_117628339	0.0154538	CCACAGG	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr15_+_40763150_40763285	0.0148989	CCACAGG	ENST00000306243.5|CHST14|ENSG00000169105.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 	ENST00000559991.1|CHST14|ENSG00000169105.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
hg19_v2_chr5_+_112312416_112312440	0.0148638	CCACAGG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr5_-_137090028_137090075	0.0148569	CCACAGG	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr1_+_201252580_201252640	0.0148269	CCACAGG	ENST00000367324.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 	ENST00000263946.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg19_v2_chr7_-_27224795_27224840	0.0146932	CCACAGG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr17_+_61851157_61851244	0.0144163	CCACAGG	ENST00000578681.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42 	ENST00000583590.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42
hg19_v2_chr1_+_10271674_10271674	0.0137392	CCACAGG	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr11_+_118754475_118754552	0.013202	CCACAGG	ENST00000292174.4|CXCR5|ENSG00000160683.4|chemokine (C-X-C motif) receptor 5
hg19_v2_chr17_+_67410832_67410871	0.0131693	CCACAGG	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr14_+_100705322_100705360	0.0127952	CCACAGG	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr12_-_91348949_91348958	0.0127686	CCACAGG	ENST00000358859.2|CCER1|ENSG00000197651.3|coiled-coil glutamate-rich protein 1
hg19_v2_chr17_-_38020392_38020477	0.0126036	CCACAGG	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr9_-_100684845_100684856	0.0125185	CCACAGG	ENST00000375119.3|C9orf156|ENSG00000136932.9|chromosome 9 open reading frame 156
hg19_v2_chr3_+_14989076_14989113	0.0125021	CCACAGG	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr8_+_38614807_38614851	0.0122872	CCACAGG	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr20_-_60640866_60640901	0.0121187	CCACAGG	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr10_+_99400443_99400497	0.0118856	CCACAGG	ENST00000370631.3|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha
hg19_v2_chr17_-_43568062_43568110	0.0116346	CCACAGG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr5_+_140044261_140044464	0.0115513	CCACAGG	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr3_+_178866199_178866311	0.0113425	CCACAGG	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr6_-_30585009_30585028	0.0110885	CCACAGG	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr17_-_40897043_40897087	0.0110154	CCACAGG	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr7_+_97736197_97736211	0.0106886	CCACAGG	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr15_+_72766651_72766680	0.0105414	CCACAGG	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_12290121_12290141	0.0104958	CCACAGG	ENST00000358136.3|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae) 	ENST00000356315.4|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae)
hg19_v2_chr5_-_178017355_178017556	0.0103793	CCACAGG	ENST00000390654.3|COL23A1|ENSG00000050767.11|collagen, type XXIII, alpha 1
hg19_v2_chr1_-_154943212_154943230	0.0097895	CCACAGG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr3_+_51741072_51741106	0.00964087	CCACAGG	ENST00000395052.3|GRM2|ENSG00000164082.10|glutamate receptor, metabotropic 2
hg19_v2_chr17_+_44928946_44928953	0.00933071	CCACAGG	ENST00000290015.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B 	ENST00000393461.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B
hg19_v2_chr3_+_48956249_48956330	0.00926721	CCACAGG	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr17_-_79885576_79885624	0.00912692	CCACAGG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr17_-_33446820_33446899	0.00889052	CCACAGG	ENST00000592577.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000590016.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000345365.6|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000360276.3|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000357906.3|RAD51D|ENSG00000185379.16|RAD51 paralog D
hg19_v2_chr17_+_42422637_42422655	0.00884851	CCACAGG	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr14_-_77787198_77787244	0.0086939	CCACAGG	ENST00000261534.4|POMT2|ENSG00000009830.7|protein-O-mannosyltransferase 2
hg19_v2_chr11_+_73498898_73498965	0.00866201	CCACAGG	ENST00000535529.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000497094.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000411840.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000535277.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000398483.3|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000542303.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr16_-_71758602_71758604	0.00825125	CCACAGG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr6_-_116601044_116601106	0.0080643	CCACAGG	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr6_+_35265586_35265641	0.0079179	CCACAGG	ENST00000542066.1|DEF6|ENSG00000023892.9|differentially expressed in FDCP 6 homolog (mouse) 	ENST00000316637.5|DEF6|ENSG00000023892.9|differentially expressed in FDCP 6 homolog (mouse)
hg19_v2_chr10_+_72164135_72164135	0.00785069	CCACAGG	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr5_-_77844974_77844994	0.00781427	CCACAGG	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr15_+_40733387_40733416	0.00767654	CCACAGG	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr1_-_32801825_32801980	0.00755895	CCACAGG	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr20_-_44718538_44718612	0.00738786	CCACAGG	ENST00000290231.6|NCOA5|ENSG00000124160.7|nuclear receptor coactivator 5 	ENST00000372291.3|NCOA5|ENSG00000124160.7|nuclear receptor coactivator 5
hg19_v2_chr17_-_39890893_39890898	0.00738462	CCACAGG	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr2_+_45878790_45878913	0.0073347	CCACAGG	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr5_+_167181917_167181979	0.00721712	CCACAGG	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr15_+_41851211_41851232	0.00719276	CCACAGG	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr19_-_46000251_46000319	0.00714613	CCACAGG	ENST00000590526.1|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000344680.4|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000245923.4|RTN2|ENSG00000125744.7|reticulon 2
hg19_v2_chrX_-_124097620_124097666	0.00679237	CCACAGG	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr1_-_173991434_173991556	0.00648977	CCACAGG	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr19_-_10341948_10341965	0.00628277	CCACAGG	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr11_+_129939779_129939801	0.0061912	CCACAGG	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr12_+_121837844_121837892	0.00607797	CCACAGG	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr13_+_37393351_37393423	0.00603532	CCACAGG	ENST00000255476.2|RFXAP|ENSG00000133111.3|regulatory factor X-associated protein
hg19_v2_chr6_-_53213780_53213947	0.00582169	CCACAGG	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr6_+_34433844_34433921	0.00561009	CCACAGG	ENST00000244458.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1 	ENST00000374043.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1
hg19_v2_chr1_+_118148556_118148681	0.00543945	CCACAGG	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr15_+_51200859_51200870	0.00541289	CCACAGG	ENST00000261842.5|AP4E1|ENSG00000081014.6|adaptor-related protein complex 4, epsilon 1 subunit
hg19_v2_chr5_+_43121698_43121786	0.00537821	CCACAGG	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr20_-_39928705_39928740	0.00536106	CCACAGG	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr3_-_66551351_66551356	0.00526839	CCACAGG	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr1_+_60280458_60280546	0.00513936	CCACAGG	ENST00000455990.1|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1 	ENST00000371208.3|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1
hg19_v2_chr10_+_126630692_126630692	0.00502926	CCACAGG	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr5_-_175964366_175964429	0.00497274	CCACAGG	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr6_+_117586713_117586737	0.00484539	CCACAGG	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chrX_+_150151752_150151762	0.0047724	CCACAGG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr10_+_76871454_76871467	0.00455143	CCACAGG	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr3_-_57199397_57199432	0.00447085	CCACAGG	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr2_+_149402553_149402568	0.0043886	CCACAGG	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr1_-_26197744_26197744	0.00415483	CCACAGG	ENST00000374296.3|PAQR7|ENSG00000182749.5|progestin and adipoQ receptor family member VII
hg19_v2_chrX_+_128872998_128873006	0.00376874	CCACAGG	ENST00000371106.3|XPNPEP2|ENSG00000122121.6|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
hg19_v2_chr2_+_113033164_113033219	0.00352995	CCACAGG	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr16_+_24741013_24741058	0.00346735	CCACAGG	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr16_-_85833160_85833214	0.0034637	CCACAGG	ENST00000435200.2|EMC8|ENSG00000131148.4|ER membrane protein complex subunit 8
hg19_v2_chr11_+_63580855_63580889	0.00334467	CCACAGG	ENST00000294244.4|C11orf84|ENSG00000168005.4|chromosome 11 open reading frame 84
hg19_v2_chr1_-_205601064_205601090	0.00295421	CCACAGG	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr8_-_67579418_67579498	0.0029042	CCACAGG	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr4_+_118955500_118955612	0.00275457	CCACAGG	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr17_+_56160768_56160786	0.00274513	CCACAGG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr2_-_55237484_55237585	0.00259441	CCACAGG	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr20_+_37554955_37555067	0.00247058	CCACAGG	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr13_+_52158610_52158654	0.00232582	CCACAGG	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chr12_+_122150646_122150719	0.00229506	CCACAGG	ENST00000449592.2|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr3_+_51428704_51428737	0.00204846	CCACAGG	ENST00000323686.4|RBM15B|ENSG00000179837.6|RNA binding motif protein 15B
hg19_v2_chr17_+_38296576_38296604	0.00202805	CCACAGG	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr18_+_9136758_9136852	0.00181098	CCACAGG	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr9_+_133884469_133884594	0.00171989	CCACAGG	ENST00000361069.4|LAMC3|ENSG00000050555.13|laminin, gamma 3
hg19_v2_chr1_+_113010056_113010056	0.00168573	CCACAGG	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr1_+_62902308_62902335	0.00163201	CCACAGG	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr2_+_71558858_71558936	0.00158978	CCACAGG	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr7_+_65338230_65338293	0.00153947	CCACAGG	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr12_+_50898881_50898907	0.00148196	CCACAGG	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr17_+_6918093_6918139	0.00123523	CCACAGG	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr3_+_5020801_5020952	0.00104072	CCACAGG	ENST00000256495.3|BHLHE40|ENSG00000134107.4|basic helix-loop-helix family, member e40
hg19_v2_chr16_+_30968615_30968628	0.00078981	CCACAGG	ENST00000262519.8|SETD1A|ENSG00000099381.12|SET domain containing 1A
hg19_v2_chr12_-_90049828_90049847	0.000778216	CCACAGG	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr17_-_58469474_58469511	0.000624274	CCACAGG	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr3_+_188889737_188889767	0.000592206	CCACAGG	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr20_+_47835884_47835920	0.000568039	CCACAGG	ENST00000371764.4|DDX27|ENSG00000124228.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v2_chr10_-_32345305_32345376	0.000559778	CCACAGG	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr7_+_100136811_100136882	8.72734e-05	CCACAGG	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr17_-_26733179_26733237	5.47743e-05	CCACAGG	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr14_+_70078303_70078321	4.46161e-05	CCACAGG	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
