hg19_v2_chr5_-_100238956_100238994	0.490039	GAGAUGA	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr2_+_45878790_45878913	0.330532	GAGAUGA	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr17_+_47865917_47866068	0.213895	GAGAUGA	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr4_+_87856129_87856186	0.206848	GAGAUGA	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr2_+_28615669_28615733	0.196245	GAGAUGA	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr9_+_79074068_79074150	0.188701	GAGAUGA	ENST00000444201.2|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2 	ENST00000376730.4|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v2_chr10_+_70320413_70320413	0.178629	GAGAUGA	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr17_-_47841485_47841529	0.163897	GAGAUGA	ENST00000506156.1|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A 	ENST00000240364.2|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A
hg19_v2_chr12_-_46766577_46766650	0.16377	GAGAUGA	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr11_-_73309228_73309257	0.141249	GAGAUGA	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr14_+_37667118_37667192	0.130598	GAGAUGA	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr1_-_211752073_211752084	0.122466	GAGAUGA	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr12_+_50898881_50898907	0.116547	GAGAUGA	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr14_+_77228532_77228672	0.112314	GAGAUGA	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chrX_+_73641286_73641400	0.110476	GAGAUGA	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr15_-_44486632_44486664	0.110186	GAGAUGA	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chrX_-_106959631_106959775	0.107846	GAGAUGA	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr11_-_130184555_130184581	0.107627	GAGAUGA	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr1_-_179198702_179198741	0.0921207	GAGAUGA	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr1_+_87794150_87794172	0.0899606	GAGAUGA	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr15_-_49338748_49338765	0.0892773	GAGAUGA	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr15_-_26108355_26108417	0.0890631	GAGAUGA	ENST00000356865.6|ATP10A|ENSG00000206190.7|ATPase, class V, type 10A
hg19_v2_chr1_-_186649543_186649563	0.0876487	GAGAUGA	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr7_-_42276612_42276782	0.0852233	GAGAUGA	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr11_+_86748863_86748948	0.078475	GAGAUGA	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr17_+_65821780_65821826	0.0759125	GAGAUGA	ENST00000321892.4|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000335221.5|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000306378.6|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor
hg19_v2_chr9_+_130830451_130830572	0.0758009	GAGAUGA	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr6_+_107811162_107811196	0.073988	GAGAUGA	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr20_+_2673383_2673525	0.068322	GAGAUGA	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr1_+_64936428_64936475	0.0666044	GAGAUGA	ENST00000371073.2|CACHD1|ENSG00000158966.9|cache domain containing 1 	ENST00000290039.5|CACHD1|ENSG00000158966.9|cache domain containing 1
hg19_v2_chr19_-_51141196_51141302	0.066422	GAGAUGA	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr16_-_23521710_23521826	0.061821	GAGAUGA	ENST00000562117.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000567468.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000562944.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000309859.4|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v2_chr2_+_181845298_181845378	0.0595812	GAGAUGA	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chrX_-_109561294_109561467	0.0546368	GAGAUGA	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr11_+_113930291_113930339	0.0543355	GAGAUGA	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr17_-_61920280_61920425	0.0542387	GAGAUGA	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg19_v2_chr12_-_65146636_65146651	0.0531343	GAGAUGA	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr2_+_233562015_233562062	0.0526476	GAGAUGA	ENST00000427233.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373566.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373563.4|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000428883.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000456491.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409480.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000421433.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000425040.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000430720.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409547.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000423659.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409196.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409451.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000429187.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000440945.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2
hg19_v2_chr1_+_62208091_62208182	0.0518719	GAGAUGA	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr2_-_25873079_25873093	0.0499562	GAGAUGA	ENST00000496972.2|DTNB|ENSG00000138101.14|dystrobrevin, beta
hg19_v2_chr6_-_52441713_52441784	0.0486747	GAGAUGA	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr6_-_132272504_132272519	0.0486202	GAGAUGA	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr14_+_105992906_105992946	0.0480661	GAGAUGA	ENST00000392519.2|TMEM121|ENSG00000184986.6|transmembrane protein 121
hg19_v2_chr11_+_13690200_13690244	0.0452351	GAGAUGA	ENST00000354817.3|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr9_+_130374537_130374568	0.0442367	GAGAUGA	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr9_+_90112741_90112761	0.0427997	GAGAUGA	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr13_+_28813645_28813770	0.0426631	GAGAUGA	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr11_-_9336234_9336327	0.0421827	GAGAUGA	ENST00000528080.1|TMEM41B|ENSG00000166471.6|transmembrane protein 41B
hg19_v2_chr9_-_20622478_20622542	0.0410664	GAGAUGA	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr12_-_42538657_42538720	0.0382979	GAGAUGA	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr1_-_231560790_231560790	0.0369365	GAGAUGA	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr17_-_46623441_46623441	0.0368209	GAGAUGA	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr3_+_97483366_97483422	0.0366073	GAGAUGA	ENST00000463745.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6 	ENST00000462412.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6
hg19_v2_chr9_-_71155783_71155800	0.0363179	GAGAUGA	ENST00000377311.3|TMEM252|ENSG00000181778.4|transmembrane protein 252
hg19_v2_chr13_+_48807288_48807302	0.034948	GAGAUGA	ENST00000378565.5|ITM2B|ENSG00000136156.8|integral membrane protein 2B
hg19_v2_chr17_+_60704762_60704762	0.0325977	GAGAUGA	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr15_+_77287426_77287487	0.0322231	GAGAUGA	ENST00000558012.1|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000267939.5|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000379595.3|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1
hg19_v2_chr2_+_120517174_120517207	0.0316747	GAGAUGA	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chrX_+_9983602_9983602	0.0309472	GAGAUGA	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr10_-_126849068_126849138	0.0306702	GAGAUGA	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr2_-_164592497_164592573	0.029959	GAGAUGA	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr12_+_60083118_60083157	0.0291993	GAGAUGA	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr17_+_38278530_38278605	0.0290325	GAGAUGA	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr12_-_49449107_49449107	0.0275188	GAGAUGA	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr16_+_50187556_50187779	0.0273779	GAGAUGA	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr12_+_8234807_8234855	0.0267737	GAGAUGA	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr4_-_24914508_24914524	0.0255684	GAGAUGA	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr7_+_2671568_2671606	0.0243494	GAGAUGA	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr16_+_70148230_70148275	0.023138	GAGAUGA	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr3_-_122102065_122102101	0.0228111	GAGAUGA	ENST00000479899.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000291458.5|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000497726.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58
hg19_v2_chr2_+_173292301_173292332	0.02247	GAGAUGA	ENST00000264106.6|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000375221.2|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000343713.4|ITGA6|ENSG00000091409.10|integrin, alpha 6
hg19_v2_chr19_-_14629224_14629262	0.0223222	GAGAUGA	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr11_+_57520715_57520776	0.0221398	GAGAUGA	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr3_-_52188397_52188450	0.0218107	GAGAUGA	ENST00000474012.1|POC1A|ENSG00000164087.3|POC1 centriolar protein A 	ENST00000296484.2|POC1A|ENSG00000164087.3|POC1 centriolar protein A
hg19_v2_chr7_+_142985308_142985453	0.0213444	GAGAUGA	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr9_+_116638562_116638606	0.0213407	GAGAUGA	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr6_+_43265992_43266003	0.0213269	GAGAUGA	ENST00000449231.1|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7 	ENST00000372589.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7 	ENST00000372585.5|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr2_+_220042933_220042985	0.0208749	GAGAUGA	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr15_+_39873268_39873294	0.0207083	GAGAUGA	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr10_+_65281123_65281183	0.0205782	GAGAUGA	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr4_+_99916765_99916776	0.0204107	GAGAUGA	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr18_-_29522989_29523104	0.0194202	GAGAUGA	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr17_+_28705921_28706000	0.0188323	GAGAUGA	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr2_+_86947296_86947434	0.0183422	GAGAUGA	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr5_-_154317740_154317787	0.0183101	GAGAUGA	ENST00000285873.7|GEMIN5|ENSG00000082516.8|gem (nuclear organelle) associated protein 5
hg19_v2_chr3_+_9834758_9834801	0.0168718	GAGAUGA	ENST00000485273.1|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa 	ENST00000397256.1|ARPC4-TTLL3|ENSG00000250151.5|ARPC4-TTLL3 readthrough 	ENST00000433034.1|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr3_+_183873098_183873230	0.016797	GAGAUGA	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr13_+_45563721_45563755	0.0166613	GAGAUGA	ENST00000361121.2|GPALPP1|ENSG00000133114.13|GPALPP motifs containing 1
hg19_v2_chr17_+_56160768_56160786	0.0163505	GAGAUGA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr5_+_145583156_145583180	0.0161411	GAGAUGA	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr3_-_125094093_125094198	0.0158726	GAGAUGA	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_-_85839146_85839198	0.0157407	GAGAUGA	ENST00000306336.5|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68 	ENST00000409734.3|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68
hg19_v2_chr1_-_40137710_40137824	0.0155781	GAGAUGA	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr11_-_67236691_67236748	0.0150831	GAGAUGA	ENST00000544903.1|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000308022.2|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000393877.3|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000452789.2|TMEM134|ENSG00000172663.4|transmembrane protein 134
hg19_v2_chr11_+_76494253_76494317	0.0149846	GAGAUGA	ENST00000333090.4|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr11_-_77532050_77532066	0.0149085	GAGAUGA	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr20_+_56964169_56964182	0.0142816	GAGAUGA	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr5_+_139944024_139944054	0.0140648	GAGAUGA	ENST00000323146.3|SLC35A4|ENSG00000176087.10|solute carrier family 35, member A4
hg19_v2_chr18_-_54305658_54305876	0.0138526	GAGAUGA	ENST00000586262.1|TXNL1|ENSG00000091164.8|thioredoxin-like 1 	ENST00000217515.6|TXNL1|ENSG00000091164.8|thioredoxin-like 1
hg19_v2_chr5_+_54455946_54456019	0.0135477	GAGAUGA	ENST00000503787.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000296734.6|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000515370.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative)
hg19_v2_chr17_+_61086917_61086921	0.0134898	GAGAUGA	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr20_-_48099182_48099214	0.0134471	GAGAUGA	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr15_+_68871308_68871354	0.0133332	GAGAUGA	ENST00000261861.5|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr14_-_96830207_96830207	0.0132	GAGAUGA	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chrX_+_133507327_133507386	0.012513	GAGAUGA	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr10_-_89623194_89623194	0.0124573	GAGAUGA	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chr4_+_15004165_15004298	0.0123672	GAGAUGA	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr1_+_36348790_36348822	0.011915	GAGAUGA	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr9_-_74525658_74525658	0.0116615	GAGAUGA	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr17_-_28618948_28619023	0.0114074	GAGAUGA	ENST00000261714.6|BLMH|ENSG00000108578.10|bleomycin hydrolase
hg19_v2_chr6_+_32709119_32709175	0.0113931	GAGAUGA	ENST00000374940.3|HLA-DQA2|ENSG00000237541.3|major histocompatibility complex, class II, DQ alpha 2
hg19_v2_chr6_+_118228657_118228715	0.011363	GAGAUGA	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr6_-_24721054_24721074	0.0112604	GAGAUGA	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr14_+_101193164_101193241	0.0110716	GAGAUGA	ENST00000341267.4|DLK1|ENSG00000185559.9|delta-like 1 homolog (Drosophila)
hg19_v2_chr10_+_76871454_76871467	0.0110592	GAGAUGA	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr19_-_46476791_46476819	0.0107053	GAGAUGA	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr3_+_9975497_9975553	0.0105799	GAGAUGA	ENST00000397170.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000383811.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000452070.1|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000326434.5|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1
hg19_v2_chr8_-_116681221_116681236	0.0105124	GAGAUGA	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr19_+_3359561_3359681	0.0103873	GAGAUGA	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr5_+_154092396_154092462	0.0101982	GAGAUGA	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chrX_-_63425561_63425624	0.00982376	GAGAUGA	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr19_-_13617247_13617319	0.00930548	GAGAUGA	ENST00000573710.2|CACNA1A|ENSG00000141837.14|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg19_v2_chr5_+_141303373_141303421	0.0090428	GAGAUGA	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr3_-_114790179_114790222	0.0088775	GAGAUGA	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr17_+_38219063_38219154	0.00880769	GAGAUGA	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr4_+_44680429_44680498	0.00839868	GAGAUGA	ENST00000281543.5|GUF1|ENSG00000151806.9|GUF1 GTPase homolog (S. cerevisiae)
hg19_v2_chr1_-_41131326_41131400	0.00816868	GAGAUGA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr12_-_25403737_25403881	0.00758621	GAGAUGA	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr10_+_105253661_105253736	0.00756919	GAGAUGA	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr5_-_159846399_159846412	0.0072543	GAGAUGA	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr11_-_79151695_79151710	0.00719436	GAGAUGA	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr2_-_10952922_10952970	0.00666603	GAGAUGA	ENST00000272227.3|PDIA6|ENSG00000143870.8|protein disulfide isomerase family A, member 6
hg19_v2_chr7_+_31092076_31092106	0.00644319	GAGAUGA	ENST00000304166.4|ADCYAP1R1|ENSG00000078549.10|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
hg19_v2_chr20_-_40247133_40247194	0.00613858	GAGAUGA	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr19_-_40324255_40324296	0.00598845	GAGAUGA	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr1_+_2323260_2323329	0.00590932	GAGAUGA	ENST00000378518.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000605895.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000378513.3|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000306256.9|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000378512.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1
hg19_v2_chr5_+_142149955_142150000	0.00574665	GAGAUGA	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr19_+_37960240_37960299	0.00556253	GAGAUGA	ENST00000388801.3|ZNF570|ENSG00000171827.6|zinc finger protein 570
hg19_v2_chr2_+_97481974_97482015	0.00541614	GAGAUGA	ENST00000377060.3|CNNM3|ENSG00000168763.11|cyclin M3 	ENST00000305510.3|CNNM3|ENSG00000168763.11|cyclin M3
hg19_v2_chr19_-_38806560_38806607	0.0052236	GAGAUGA	ENST00000591755.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000337679.8|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000339413.6|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae)
hg19_v2_chr1_-_115259337_115259515	0.00460846	GAGAUGA	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr15_+_31619013_31619095	0.00409783	GAGAUGA	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr22_+_40390930_40390994	0.00371031	GAGAUGA	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr2_+_172778952_172779004	0.00356023	GAGAUGA	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chrX_-_110655391_110655449	0.00320954	GAGAUGA	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr17_+_57784826_57784883	0.00311048	GAGAUGA	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr12_-_54673871_54673925	0.0030927	GAGAUGA	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr12_+_103981044_103981061	0.00309259	GAGAUGA	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chrX_+_77359671_77359721	0.00298186	GAGAUGA	ENST00000373316.4|PGK1|ENSG00000102144.9|phosphoglycerate kinase 1
hg19_v2_chr2_-_73053126_73053184	0.00291261	GAGAUGA	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr3_+_19189946_19190079	0.00279976	GAGAUGA	ENST00000328405.2|KCNH8|ENSG00000183960.4|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg19_v2_chr2_-_9563319_9563379	0.00213229	GAGAUGA	ENST00000497105.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000360635.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000359712.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr2_+_187350883_187350962	0.00209473	GAGAUGA	ENST00000337859.6|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr18_-_60987220_60987386	0.00207573	GAGAUGA	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr2_-_69870835_69870853	0.00176653	GAGAUGA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr17_-_29151794_29151803	0.00174266	GAGAUGA	ENST00000324238.6|CRLF3|ENSG00000176390.10|cytokine receptor-like factor 3
hg19_v2_chr5_+_141488070_141488094	0.00151272	GAGAUGA	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr20_+_30865429_30865480	0.000552168	GAGAUGA	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr1_+_110527308_110527349	0.000489703	GAGAUGA	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
