hg19_v2_chr11_-_102651343_102651365	0.640914	HOXD1	ENST00000279441.4|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2) 	ENST00000539681.1|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2)
hg19_v2_chr4_+_144354644_144354734	0.532151	HOXD1	ENST00000512843.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr4_+_86525299_86525314	0.485491	HOXD1	ENST00000512201.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr5_+_66300446_66300463	0.466653	HOXD1	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr20_-_50418972_50419029	0.4068	HOXD1	ENST00000395997.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr20_-_50418947_50418964	0.404745	HOXD1	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr15_-_55562479_55562490	0.316976	HOXD1	ENST00000564609.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr15_-_55562582_55562617	0.312484	HOXD1	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr15_-_55563072_55563135	0.285481	HOXD1	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr4_-_119759795_119759833	0.284749	HOXD1	ENST00000419654.2|SEC24D|ENSG00000150961.10|SEC24 family member D
hg19_v2_chr3_+_111717511_111717589	0.270997	HOXD1	ENST00000478951.1|TAGLN3|ENSG00000144834.8|transgelin 3 	ENST00000393917.2|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr3_+_111717600_111717642	0.263209	HOXD1	ENST00000273368.4|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr3_+_111718036_111718047	0.238867	HOXD1	ENST00000455401.2|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr1_+_117544366_117544434	0.227434	HOXD1	ENST00000256652.4|CD101|ENSG00000134256.8|CD101 molecule 	ENST00000369470.1|CD101|ENSG00000134256.8|CD101 molecule
hg19_v2_chr11_-_71823266_71823325	0.225244	HOXD1	ENST00000538919.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000539395.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000542531.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr11_-_62521614_62521660	0.194278	HOXD1	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr11_-_71823796_71823826	0.190832	HOXD1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr7_-_81399411_81399432	0.182876	HOXD1	ENST00000423064.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr11_-_71823715_71823792	0.17778	HOXD1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr20_-_50419055_50419066	0.175759	HOXD1	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr11_+_60163775_60163917	0.175739	HOXD1	ENST00000300187.6|MS4A14|ENSG00000166928.6|membrane-spanning 4-domains, subfamily A, member 14 	ENST00000395005.2|MS4A14|ENSG00000166928.6|membrane-spanning 4-domains, subfamily A, member 14
hg19_v2_chr3_-_99569821_99569919	0.17063	HOXD1	ENST00000487087.1|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr7_-_73256838_73256870	0.159579	HOXD1	ENST00000297873.4|WBSCR27|ENSG00000165171.6|Williams Beuren syndrome chromosome region 27
hg19_v2_chr2_+_228736335_228736397	0.137356	HOXD1	ENST00000440997.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1 	ENST00000545118.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1
hg19_v2_chr7_-_99717463_99717483	0.131031	HOXD1	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr11_-_26593779_26593795	0.126302	HOXD1	ENST00000529533.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr11_-_26593677_26593708	0.124417	HOXD1	ENST00000527569.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr8_+_55528627_55528631	0.120106	HOXD1	ENST00000220676.1|RP1|ENSG00000104237.6|retinitis pigmentosa 1 (autosomal dominant)
hg19_v2_chr20_+_43990576_43990596	0.118831	HOXD1	ENST00000372727.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000414310.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr13_+_36050881_36050887	0.114144	HOXD1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr18_-_33709268_33709380	0.111569	HOXD1	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr11_+_71900572_71900602	0.111061	HOXD1	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr11_+_71900703_71900725	0.105941	HOXD1	ENST00000393681.2|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr7_+_99717230_99717321	0.0979248	HOXD1	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chr19_+_50016610_50016658	0.0946637	HOXD1	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr12_+_15699286_15699354	0.080656	HOXD1	ENST00000442921.2|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000542557.1|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000445537.2|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000544244.1|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O
hg19_v2_chr19_-_3557570_3557590	0.0799949	HOXD1	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr14_+_32798462_32798539	0.0678514	HOXD1	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr4_-_139051839_139051863	0.0646124	HOXD1	ENST00000514600.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000513895.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000512536.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616
hg19_v2_chr8_+_92261516_92261555	0.0642199	HOXD1	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr4_-_74486109_74486166	0.0633639	HOXD1	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr7_+_133812052_133812122	0.0613698	HOXD1	ENST00000285928.2|LRGUK|ENSG00000155530.2|leucine-rich repeats and guanylate kinase domain containing
hg19_v2_chr7_-_99716952_99717021	0.0602842	HOXD1	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr11_+_65554493_65554546	0.0563744	HOXD1	ENST00000335987.3|OVOL1|ENSG00000172818.5|ovo-like zinc finger 1
hg19_v2_chr4_-_74486347_74486348	0.0534084	HOXD1	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr5_+_176811431_176811445	0.0522757	HOXD1	ENST00000512593.1|SLC34A1|ENSG00000131183.6|solute carrier family 34 (type II sodium/phosphate contransporter), member 1 	ENST00000324417.5|SLC34A1|ENSG00000131183.6|solute carrier family 34 (type II sodium/phosphate contransporter), member 1
hg19_v2_chr3_-_101039402_101039429	0.0520392	HOXD1	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr14_+_32798547_32798606	0.0502637	HOXD1	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr3_+_2933893_2933921	0.0488404	HOXD1	ENST00000397459.2|CNTN4|ENSG00000144619.10|contactin 4
hg19_v2_chr5_+_63802109_63802139	0.0469313	HOXD1	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr15_-_37393406_37393528	0.044384	HOXD1	ENST00000338564.5|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000558313.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000340545.5|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr12_-_52761262_52761267	0.0441133	HOXD1	ENST00000257901.3|KRT85|ENSG00000135443.4|keratin 85
hg19_v2_chr4_+_113568207_113568367	0.0438692	HOXD1	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr14_+_56584414_56584532	0.0437004	HOXD1	ENST00000559044.1|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr11_+_118398178_118398208	0.0401752	HOXD1	ENST00000302783.4|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36 	ENST00000539546.1|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36
hg19_v2_chr22_+_24951949_24951980	0.0400658	HOXD1	ENST00000402849.1|SNRPD3|ENSG00000100028.7|small nuclear ribonucleoprotein D3 polypeptide 18kDa
hg19_v2_chr1_-_151431909_151431987	0.0328313	HOXD1	ENST00000361398.3|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000271715.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr12_-_22063787_22063912	0.0321825	HOXD1	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr17_-_27418537_27418537	0.0313571	HOXD1	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr10_+_99205894_99205954	0.026033	HOXD1	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr4_-_25865159_25865382	0.0237519	HOXD1	ENST00000502949.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000264868.5|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000513691.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000514872.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
hg19_v2_chr1_-_190446759_190446774	0.0221107	HOXD1	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr3_-_151034734_151034745	0.021591	HOXD1	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr3_-_164796269_164796290	0.0211299	HOXD1	ENST00000264382.3|SI|ENSG00000090402.3|sucrase-isomaltase (alpha-glucosidase)
hg19_v2_chr9_+_124329336_124329406	0.017823	HOXD1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr2_+_135596106_135596137	0.0158237	HOXD1	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr7_-_81399329_81399347	0.0151662	HOXD1	ENST00000453411.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor) 	ENST00000444829.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr10_+_99205959_99205981	0.0149177	HOXD1	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr12_+_109577202_109577289	0.0148911	HOXD1	ENST00000377848.3|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta 	ENST00000377854.5|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr7_-_81399438_81399514	0.0144024	HOXD1	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr12_-_118796910_118796943	0.0135731	HOXD1	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr3_-_191000172_191000209	0.0117494	HOXD1	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr2_+_187371440_187371567	0.00755392	HOXD1	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr11_+_73498898_73498965	0.00278055	HOXD1	ENST00000535529.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000497094.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000411840.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000535277.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000398483.3|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000542303.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr2_+_135596180_135596193	0.00184403	HOXD1	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr2_+_11682790_11682851	0.00136774	HOXD1	ENST00000389825.3|GREB1|ENSG00000196208.9|growth regulation by estrogen in breast cancer 1 	ENST00000381483.2|GREB1|ENSG00000196208.9|growth regulation by estrogen in breast cancer 1
hg19_v2_chr4_-_150736962_150736980	0.000481614	HOXD1	ENST00000502345.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000510975.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000511993.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1
