hg19_v2_chr6_+_130339710_130339745	0.374673	HOXD4	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr12_+_21168630_21168630	0.363129	HOXD4	ENST00000421593.2|SLCO1B7|ENSG00000205754.6|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v2_chr6_-_44281043_44281091	0.322375	HOXD4	ENST00000244571.4|AARS2|ENSG00000124608.4|alanyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr13_+_33160553_33160564	0.304159	HOXD4	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr11_-_89223883_89223904	0.277071	HOXD4	ENST00000528341.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr3_-_126327398_126327398	0.264484	HOXD4	ENST00000383572.2|TXNRD3NB|ENSG00000206483.4|thioredoxin reductase 3 neighbor
hg19_v2_chr16_-_21663919_21663936	0.238609	HOXD4	ENST00000569602.1|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr4_-_143226979_143226990	0.235951	HOXD4	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr2_+_179317994_179317994	0.218987	HOXD4	ENST00000375129.4|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr2_+_196313239_196313256	0.215105	HOXD4	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr12_+_12938541_12938600	0.200353	HOXD4	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr4_-_130014729_130014777	0.198377	HOXD4	ENST00000281142.5|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1 	ENST00000434680.1|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1
hg19_v2_chr11_-_89224488_89224507	0.184802	HOXD4	ENST00000534731.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000527626.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr2_-_165424973_165425010	0.184427	HOXD4	ENST00000543549.1|GRB14|ENSG00000115290.5|growth factor receptor-bound protein 14
hg19_v2_chr17_+_47448102_47448102	0.184284	HOXD4	ENST00000576461.1|RP11-81K2.1|ENSG00000262039.1|Uncharacterized protein
hg19_v2_chr11_-_89224508_89224563	0.183729	HOXD4	ENST00000525196.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr4_-_138453606_138453673	0.179048	HOXD4	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr2_+_179318295_179318295	0.172774	HOXD4	ENST00000442710.1|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr17_-_39150385_39150417	0.172267	HOXD4	ENST00000391586.1|KRTAP3-3|ENSG00000212899.1|keratin associated protein 3-3
hg19_v2_chr2_+_88047606_88047606	0.169728	HOXD4	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr4_-_89951028_89951062	0.168523	HOXD4	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr16_+_24549014_24549082	0.163957	HOXD4	ENST00000564314.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6 	ENST00000567686.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6
hg19_v2_chr11_-_89224299_89224466	0.161741	HOXD4	ENST00000343727.5|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000531342.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000375979.3|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr3_-_18480260_18480269	0.159527	HOXD4	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr10_-_98119030_98119092	0.159367	HOXD4	ENST00000371172.3|OPALIN|ENSG00000197430.6|oligodendrocytic myelin paranodal and inner loop protein 	ENST00000393871.1|OPALIN|ENSG00000197430.6|oligodendrocytic myelin paranodal and inner loop protein 	ENST00000419479.1|OPALIN|ENSG00000197430.6|oligodendrocytic myelin paranodal and inner loop protein
hg19_v2_chr12_-_118628350_118628371	0.159091	HOXD4	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr2_+_170440844_170440897	0.15607	HOXD4	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr18_-_19994830_19994830	0.155537	HOXD4	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr17_+_39382900_39382907	0.152254	HOXD4	ENST00000377721.3|KRTAP9-2|ENSG00000239886.2|keratin associated protein 9-2 	ENST00000455970.2|KRTAP9-2|ENSG00000239886.2|keratin associated protein 9-2
hg19_v2_chr17_-_3030875_3030875	0.149121	HOXD4	ENST00000328890.2|OR1G1|ENSG00000183024.3|olfactory receptor, family 1, subfamily G, member 1
hg19_v2_chr13_+_20207782_20207841	0.146014	HOXD4	ENST00000414242.2|MPHOSPH8|ENSG00000196199.9|M-phase phosphoprotein 8 	ENST00000361479.5|MPHOSPH8|ENSG00000196199.9|M-phase phosphoprotein 8
hg19_v2_chr5_-_10761206_10761421	0.144757	HOXD4	ENST00000432074.2|DAP|ENSG00000112977.11|death-associated protein 	ENST00000230895.6|DAP|ENSG00000112977.11|death-associated protein
hg19_v2_chr4_+_74347400_74347479	0.137939	HOXD4	ENST00000226355.3|AFM|ENSG00000079557.3|afamin
hg19_v2_chr21_-_40984704_40984748	0.136963	HOXD4	ENST00000329618.6|C21orf88|ENSG00000184809.8|chromosome 21 open reading frame 88
hg19_v2_chr9_+_470288_470336	0.136393	HOXD4	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr3_+_173116225_173116242	0.135001	HOXD4	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr5_+_95066823_95066879	0.129667	HOXD4	ENST00000506817.1|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3 	ENST00000379982.3|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3
hg19_v2_chr9_+_130026756_130026871	0.128027	HOXD4	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr11_-_102714534_102714534	0.127346	HOXD4	ENST00000299855.5|MMP3|ENSG00000149968.7|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v2_chr16_-_3350614_3350614	0.124123	HOXD4	ENST00000268674.2|TIGD7|ENSG00000140993.6|tigger transposable element derived 7
hg19_v2_chr15_+_55700741_55700774	0.12375	HOXD4	ENST00000569691.1|C15orf65|ENSG00000261652.2|chromosome 15 open reading frame 65
hg19_v2_chr5_-_39274617_39274636	0.123347	HOXD4	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr1_+_67632083_67632169	0.123094	HOXD4	ENST00000347310.5|IL23R|ENSG00000162594.10|interleukin 23 receptor 	ENST00000371002.1|IL23R|ENSG00000162594.10|interleukin 23 receptor
hg19_v2_chr2_+_234826016_234826050	0.122559	HOXD4	ENST00000324695.4|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8 	ENST00000433712.2|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8
hg19_v2_chr19_-_14064114_14064204	0.121961	HOXD4	ENST00000585607.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538517.2|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000587458.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538371.2|PODNL1|ENSG00000132000.7|podocan-like 1
hg19_v2_chr6_-_26250835_26250874	0.119734	HOXD4	ENST00000446824.2|HIST1H3F|ENSG00000256316.1|histone cluster 1, H3f
hg19_v2_chr3_-_4927447_4927479	0.116011	HOXD4	ENST00000449914.1|AC018816.3|ENSG00000235978.2|Uncharacterized protein
hg19_v2_chr11_-_89224638_89224653	0.115742	HOXD4	ENST00000535633.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000263317.4|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr3_-_137851220_137851236	0.115589	HOXD4	ENST00000236709.3|A4GNT|ENSG00000118017.3|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr10_+_48189612_48189612	0.110878	HOXD4	ENST00000453919.1|AGAP9|ENSG00000198035.9|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9
hg19_v2_chrX_-_110655306_110655330	0.109035	HOXD4	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr17_+_41132564_41132600	0.108378	HOXD4	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr5_+_101569696_101569696	0.10821	HOXD4	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr11_-_89224139_89224162	0.104921	HOXD4	ENST00000413594.2|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr15_+_84115868_84115980	0.104805	HOXD4	ENST00000427482.2|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3
hg19_v2_chr2_-_31361543_31361592	0.103713	HOXD4	ENST00000349752.5|GALNT14|ENSG00000158089.10|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v2_chr1_+_182419261_182419285	0.103561	HOXD4	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr5_-_110848189_110848240	0.103216	HOXD4	ENST00000296632.3|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000512160.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000509887.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr17_-_29624343_29624429	0.102856	HOXD4	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chrX_+_139791917_139791938	0.102584	HOXD4	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chr18_+_22040593_22040616	0.100294	HOXD4	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr3_+_51575596_51575596	0.0995275	HOXD4	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chrX_-_13835147_13835224	0.0962661	HOXD4	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr2_-_99279928_99279942	0.0944233	HOXD4	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr4_-_143227088_143227105	0.0935257	HOXD4	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr2_+_32502952_32503025	0.0885717	HOXD4	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr5_-_137475071_137475122	0.088488	HOXD4	ENST00000265191.2|NME5|ENSG00000112981.3|NME/NM23 family member 5
hg19_v2_chr20_-_29978286_29978310	0.0881648	HOXD4	ENST00000376315.2|DEFB119|ENSG00000180483.6|defensin, beta 119
hg19_v2_chr5_-_55412774_55412784	0.0880255	HOXD4	ENST00000434982.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr6_-_32157947_32157992	0.0880204	HOXD4	ENST00000375050.4|PBX2|ENSG00000204304.7|pre-B-cell leukemia homeobox 2
hg19_v2_chr10_-_14372870_14372944	0.0870361	HOXD4	ENST00000357447.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr7_-_25268104_25268106	0.0868527	HOXD4	ENST00000222674.2|NPVF|ENSG00000105954.2|neuropeptide VF precursor
hg19_v2_chr5_+_31193847_31193887	0.0850998	HOXD4	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr7_+_135611542_135611542	0.0839551	HOXD4	ENST00000416501.1|AC015987.2|ENSG00000236338.1|AC015987.2
hg19_v2_chr3_-_191000172_191000209	0.0837088	HOXD4	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr2_+_204571375_204571432	0.0789632	HOXD4	ENST00000374478.4|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr14_-_99947168_99947232	0.0789214	HOXD4	ENST00000331768.5|SETD3|ENSG00000183576.8|SET domain containing 3
hg19_v2_chr13_-_45768841_45768855	0.0788004	HOXD4	ENST00000379108.1|KCTD4|ENSG00000180332.5|potassium channel tetramerization domain containing 4
hg19_v2_chr5_-_160279207_160279247	0.0783772	HOXD4	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr2_+_110656005_110656005	0.0783711	HOXD4	ENST00000437679.2|LIMS3|ENSG00000256977.6|LIM and senescent cell antigen-like domains 3
hg19_v2_chrX_-_10645773_10645795	0.077346	HOXD4	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr17_+_3118915_3118915	0.0770119	HOXD4	ENST00000304094.1|OR1A1|ENSG00000172146.1|olfactory receptor, family 1, subfamily A, member 1
hg19_v2_chr1_+_186798073_186798147	0.0762105	HOXD4	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr2_+_191045656_191045708	0.0752135	HOXD4	ENST00000443551.2|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr1_-_60539422_60539447	0.0743538	HOXD4	ENST00000371201.3|C1orf87|ENSG00000162598.9|chromosome 1 open reading frame 87
hg19_v2_chr17_-_39191107_39191127	0.0741235	HOXD4	ENST00000344363.5|KRTAP1-3|ENSG00000221880.2|keratin associated protein 1-3
hg19_v2_chr10_-_17171817_17171830	0.0715204	HOXD4	ENST00000377833.4|CUBN|ENSG00000107611.10|cubilin (intrinsic factor-cobalamin receptor)
hg19_v2_chr5_+_59783941_59784066	0.0712859	HOXD4	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chrX_+_37865804_37865842	0.0707463	HOXD4	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr9_-_93405352_93405386	0.0696537	HOXD4	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr5_-_78809950_78810040	0.0695822	HOXD4	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr10_-_52008313_52008370	0.0692049	HOXD4	ENST00000329428.6|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000395526.4|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000447815.1|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v2_chr18_+_22040620_22040693	0.0669502	HOXD4	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr17_-_39203519_39203568	0.0661081	HOXD4	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr16_-_29910853_29910903	0.0653203	HOXD4	ENST00000308713.5|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2
hg19_v2_chr2_-_160473114_160473203	0.0651133	HOXD4	ENST00000392783.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr1_-_151762943_151763012	0.0621778	HOXD4	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr4_+_146560245_146560245	0.0613548	HOXD4	ENST00000541599.1|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr2_+_176981307_176981307	0.0610344	HOXD4	ENST00000249501.4|HOXD10|ENSG00000128710.5|homeobox D10
hg19_v2_chr1_+_115572415_115572451	0.0610084	HOXD4	ENST00000256592.1|TSHB|ENSG00000134200.2|thyroid stimulating hormone, beta
hg19_v2_chr1_-_120935894_120935950	0.0602519	HOXD4	ENST00000369383.4|FCGR1B|ENSG00000198019.8|Fc fragment of IgG, high affinity Ib, receptor (CD64) 	ENST00000369384.4|FCGR1B|ENSG00000198019.8|Fc fragment of IgG, high affinity Ib, receptor (CD64)
hg19_v2_chr8_-_42698433_42698486	0.059443	HOXD4	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr18_-_19283649_19283830	0.0587881	HOXD4	ENST00000584464.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3 	ENST00000578270.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3
hg19_v2_chr2_+_190541153_190541177	0.0582809	HOXD4	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr11_+_101983176_101983245	0.0566407	HOXD4	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chrX_+_56590002_56590072	0.0557776	HOXD4	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr16_-_21663950_21663981	0.0556981	HOXD4	ENST00000268389.4|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr12_-_49245936_49245955	0.055558	HOXD4	ENST00000308025.3|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v2_chr13_-_24007815_24007872	0.0544623	HOXD4	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr2_-_225434538_225434545	0.0543701	HOXD4	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr3_-_124774802_124774852	0.054018	HOXD4	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr7_+_63361201_63361225	0.0538665	HOXD4	ENST00000450544.1|RP11-340I6.8|ENSG00000226581.1|RP11-340I6.8
hg19_v2_chr4_+_88532028_88532028	0.0519079	HOXD4	ENST00000282478.7|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr13_-_61989655_61989655	0.0512332	HOXD4	ENST00000409204.4|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr15_+_80364901_80364932	0.0509975	HOXD4	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr1_+_201617450_201617465	0.0497299	HOXD4	ENST00000295624.6|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367297.4|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367300.3|NAV1|ENSG00000134369.11|neuron navigator 1
hg19_v2_chr3_+_178276488_178276655	0.0490082	HOXD4	ENST00000432997.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000455865.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr17_-_64225508_64225539	0.047982	HOXD4	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr4_-_69111401_69111438	0.0473286	HOXD4	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr18_-_61311485_61311532	0.0468802	HOXD4	ENST00000436264.1|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4 	ENST00000356424.6|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4 	ENST00000341074.5|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4
hg19_v2_chr11_-_40315640_40315684	0.0445994	HOXD4	ENST00000278198.2|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chr1_+_209602771_209602908	0.0444587	HOXD4	ENST00000440276.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr11_-_77790865_77790934	0.0444299	HOXD4	ENST00000534029.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000525085.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000527806.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000528251.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough 	ENST00000528164.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000530054.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough
hg19_v2_chr6_+_72926145_72926245	0.0438708	HOXD4	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr4_+_146539415_146539415	0.0437459	HOXD4	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr8_-_18871159_18871201	0.0430803	HOXD4	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr8_+_28196157_28196204	0.0427267	HOXD4	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr20_+_18447771_18447771	0.0425735	HOXD4	ENST00000377603.4|POLR3F|ENSG00000132664.7|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
hg19_v2_chr20_+_32150140_32150230	0.04249	HOXD4	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr5_+_52083730_52083821	0.0423207	HOXD4	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr4_-_70505358_70505360	0.0423173	HOXD4	ENST00000457664.2|UGT2A2|ENSG00000271271.1|UDP glucuronosyltransferase 2 family, polypeptide A2 	ENST00000604629.1|UGT2A2|ENSG00000271271.1|UDP glucuronosyltransferase 2 family, polypeptide A2 	ENST00000604021.1|UGT2A2|ENSG00000271271.1|UDP glucuronosyltransferase 2 family, polypeptide A2
hg19_v2_chr2_-_160472952_160473080	0.0421169	HOXD4	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr7_-_121944491_121944705	0.0421002	HOXD4	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chr4_-_26492076_26492113	0.0416636	HOXD4	ENST00000295589.3|CCKAR|ENSG00000163394.5|cholecystokinin A receptor
hg19_v2_chr21_+_43823983_43824052	0.0416367	HOXD4	ENST00000291535.6|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000450356.1|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000319294.6|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A 	ENST00000398367.1|UBASH3A|ENSG00000160185.9|ubiquitin associated and SH3 domain containing A
hg19_v2_chr8_+_24151620_24151647	0.0413712	HOXD4	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr4_+_69313145_69313167	0.0408455	HOXD4	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr14_-_64761078_64761128	0.0407845	HOXD4	ENST00000341099.4|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000556275.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000542956.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000353772.3|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000357782.2|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000267525.6|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta)
hg19_v2_chrX_+_130192318_130192331	0.0405772	HOXD4	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr3_+_158787041_158787074	0.0394807	HOXD4	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr3_-_170744498_170744542	0.0385555	HOXD4	ENST00000382808.4|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2 	ENST00000314251.3|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v2_chr14_-_60952739_60952814	0.0382818	HOXD4	ENST00000555476.1|C14orf39|ENSG00000179008.4|chromosome 14 open reading frame 39 	ENST00000321731.3|C14orf39|ENSG00000179008.4|chromosome 14 open reading frame 39
hg19_v2_chr17_+_9479944_9479965	0.0382402	HOXD4	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr3_+_69812877_69812962	0.0379435	HOXD4	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr7_+_123488124_123488124	0.0376073	HOXD4	ENST00000476325.1|HYAL4|ENSG00000106302.5|hyaluronoglucosaminidase 4
hg19_v2_chr6_-_76072719_76072770	0.0372136	HOXD4	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr6_+_132873832_132873832	0.0370439	HOXD4	ENST00000275200.1|TAAR8|ENSG00000146385.1|trace amine associated receptor 8
hg19_v2_chr11_-_31531121_31531192	0.0369933	HOXD4	ENST00000532287.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000526776.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000534812.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000529749.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000278200.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000530023.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000533642.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr3_+_142342228_142342236	0.036443	HOXD4	ENST00000337777.3|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr11_-_104972158_104972190	0.0362	HOXD4	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr1_+_197237352_197237543	0.0361402	HOXD4	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr1_+_109256067_109256067	0.0345897	HOXD4	ENST00000271311.2|FNDC7|ENSG00000143107.4|fibronectin type III domain containing 7
hg19_v2_chr8_-_57026541_57026541	0.0345691	HOXD4	ENST00000311923.1|MOS|ENSG00000172680.1|v-mos Moloney murine sarcoma viral oncogene homolog
hg19_v2_chr2_+_204801471_204801503	0.0339914	HOXD4	ENST00000316386.6|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator 	ENST00000435193.1|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator
hg19_v2_chr3_+_197518100_197518150	0.0339099	HOXD4	ENST00000438796.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000414675.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000441090.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000334859.4|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000425562.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3
hg19_v2_chr17_-_78450398_78450413	0.0333492	HOXD4	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr13_+_37581115_37581115	0.0325606	HOXD4	ENST00000481013.1|EXOSC8|ENSG00000120699.8|exosome component 8
hg19_v2_chr2_-_203735586_203735769	0.0322924	HOXD4	ENST00000454326.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000432273.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000450143.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000411681.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr9_-_128246769_128246780	0.0303617	HOXD4	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr6_+_142468361_142468382	0.0303429	HOXD4	ENST00000367630.4|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr8_-_124279627_124279627	0.0291108	HOXD4	ENST00000357082.4|ZHX1-C8ORF76|ENSG00000259305.1|ZHX1-C8ORF76 readthrough
hg19_v2_chr4_-_153601136_153601317	0.0291051	HOXD4	ENST00000504064.1|TMEM154|ENSG00000170006.7|transmembrane protein 154 	ENST00000304385.3|TMEM154|ENSG00000170006.7|transmembrane protein 154
hg19_v2_chr5_-_13944652_13944652	0.0282618	HOXD4	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr2_-_207024233_207024327	0.0273076	HOXD4	ENST00000423725.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000233190.6|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v2_chr11_-_64684672_64684722	0.0272405	HOXD4	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr12_+_16109519_16109568	0.0270646	HOXD4	ENST00000526530.1|DERA|ENSG00000023697.8|deoxyribose-phosphate aldolase (putative)
hg19_v2_chr1_-_235814048_235814067	0.0267426	HOXD4	ENST00000450593.1|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4 	ENST00000366598.4|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4
hg19_v2_chr10_+_95848824_95848852	0.0262271	HOXD4	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr4_-_130014532_130014590	0.0260598	HOXD4	ENST00000506368.1|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1 	ENST00000439369.2|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1 	ENST00000503215.1|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1
hg19_v2_chr15_-_55700522_55700708	0.025978	HOXD4	ENST00000564092.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000310958.6|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr19_-_5903714_5903809	0.0253186	HOXD4	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chr8_-_72274467_72274490	0.0245101	HOXD4	ENST00000340726.3|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr3_+_15045419_15045433	0.0241288	HOXD4	ENST00000406272.2|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr10_+_18629628_18629672	0.0231268	HOXD4	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr12_-_86650077_86650095	0.0220904	HOXD4	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr2_-_159237472_159237472	0.0213216	HOXD4	ENST00000409187.1|CCDC148|ENSG00000153237.13|coiled-coil domain containing 148
hg19_v2_chr1_+_159750776_159750808	0.0208053	HOXD4	ENST00000368107.1|DUSP23|ENSG00000158716.4|dual specificity phosphatase 23
hg19_v2_chr17_-_41132410_41132545	0.0206621	HOXD4	ENST00000409446.3|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like 	ENST00000409399.1|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000421990.2|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000453594.1|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like
hg19_v2_chr2_+_171034646_171034706	0.0194884	HOXD4	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr15_-_55700457_55700520	0.0191987	HOXD4	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr19_+_30433110_30433214	0.0185539	HOXD4	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr12_-_112279694_112279710	0.0183923	HOXD4	ENST00000443596.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1 	ENST00000442119.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1
hg19_v2_chr2_-_190927447_190927466	0.0172081	HOXD4	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr4_-_105416039_105416065	0.0167135	HOXD4	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr15_+_36887069_36887101	0.0165619	HOXD4	ENST00000566807.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000567389.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000562877.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41
hg19_v2_chr7_-_77427676_77427897	0.01606	HOXD4	ENST00000257663.3|TMEM60|ENSG00000135211.5|transmembrane protein 60
hg19_v2_chr6_-_15548591_15548607	0.0155394	HOXD4	ENST00000509674.1|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr16_+_87636474_87636533	0.0143756	HOXD4	ENST00000284262.2|JPH3|ENSG00000154118.8|junctophilin 3
hg19_v2_chr14_-_24911868_24911902	0.0140785	HOXD4	ENST00000554698.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr7_+_120629653_120629833	0.0138949	HOXD4	ENST00000450913.2|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1 	ENST00000340646.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chr15_-_64385981_64386077	0.0130488	HOXD4	ENST00000557835.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000380290.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000559950.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr18_-_51750948_51751059	0.0128134	HOXD4	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr2_+_27886330_27886344	0.0125053	HOXD4	ENST00000326019.6|SLC4A1AP|ENSG00000163798.9|solute carrier family 4 (anion exchanger), member 1, adaptor protein
hg19_v2_chr5_+_66300446_66300463	0.0118201	HOXD4	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr2_-_183291741_183291771	0.0107951	HOXD4	ENST00000351439.5|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000409365.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr5_+_179921344_179921423	0.0104769	HOXD4	ENST00000261951.4|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr1_-_190446759_190446774	0.00974263	HOXD4	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr2_-_163695128_163695158	0.00889357	HOXD4	ENST00000332142.5|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chr14_+_35591858_35591911	0.00844852	HOXD4	ENST00000603544.1|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chrX_-_92928557_92928613	0.00808829	HOXD4	ENST00000373079.3|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3 	ENST00000475430.2|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3
hg19_v2_chr15_-_64386120_64386217	0.0068542	HOXD4	ENST00000300030.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr12_-_81763184_81763202	0.00574275	HOXD4	ENST00000548670.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000541570.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000553058.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr1_-_182921119_182921119	0.00562381	HOXD4	ENST00000423786.1|SHCBP1L|ENSG00000157060.10|SHC SH2-domain binding protein 1-like
hg19_v2_chr11_+_12766583_12766592	0.00531329	HOXD4	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr17_+_59489112_59489112	0.00530919	HOXD4	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr20_-_43729750_43729774	0.00515657	HOXD4	ENST00000537075.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 	ENST00000306117.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v2_chr5_+_67586465_67586534	0.00487918	HOXD4	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr22_+_23248512_23248512	0.00428965	HOXD4	ENST00000390325.2|IGLC3|ENSG00000211679.2|immunoglobulin lambda constant 3 (Kern-Oz+ marker)
hg19_v2_chr1_-_231560790_231560790	0.00409171	HOXD4	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr5_+_68860949_68860949	0.00391265	HOXD4	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr2_-_163695238_163695258	0.00361762	HOXD4	ENST00000328032.4|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chrX_+_36246735_36246735	0.00262317	HOXD4	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr14_+_78174414_78174521	0.00193566	HOXD4	ENST00000557342.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000238688.5|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000557623.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000557431.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000556831.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000556375.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein 	ENST00000553981.1|SLIRP|ENSG00000119705.5|SRA stem-loop interacting RNA binding protein
hg19_v2_chr3_-_4508925_4508965	0.00121414	HOXD4	ENST00000534863.1|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000383843.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000458465.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000405420.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000272902.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1
hg19_v2_chr1_+_117963209_117963245	0.00087262	HOXD4	ENST00000449370.2|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr14_-_24911971_24912015	0.000667607	HOXD4	ENST00000555365.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000399395.3|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
