hg19_v2_chr17_+_39394250_39394297	1.23321	ISX	ENST00000254072.6|KRTAP9-8|ENSG00000187272.4|keratin associated protein 9-8
hg19_v2_chr14_+_22964877_22964914	0.685277	ISX	ENST00000390494.1|TRAJ43|ENSG00000211846.1|T cell receptor alpha joining 43
hg19_v2_chr19_-_14945933_14945972	0.607201	ISX	ENST00000322301.3|OR7A5|ENSG00000188269.4|olfactory receptor, family 7, subfamily A, member 5
hg19_v2_chr11_-_121986923_121986923	0.588946	ISX	ENST00000560104.1|BLID|ENSG00000259571.1|BH3-like motif containing, cell death inducer
hg19_v2_chr20_+_42544782_42544828	0.581623	ISX	ENST00000423191.2|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2 	ENST00000372999.1|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2
hg19_v2_chr17_-_18266765_18266786	0.533317	ISX	ENST00000354098.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr6_-_111927062_111927125	0.47384	ISX	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr4_-_186733363_186733392	0.473219	ISX	ENST00000393523.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000393528.3|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000449407.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr1_+_209602156_209602183	0.458996	ISX	ENST00000429156.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000366437.3|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000603283.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000431096.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr12_-_10022735_10022735	0.433101	ISX	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr19_-_14785622_14785667	0.395772	ISX	ENST00000443157.2|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chr10_-_48416849_48416859	0.389629	ISX	ENST00000249598.1|GDF2|ENSG00000128802.3|growth differentiation factor 2
hg19_v2_chr10_+_103986085_103986085	0.372699	ISX	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr17_-_40829026_40829048	0.370063	ISX	ENST00000412503.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chrX_+_77166172_77166261	0.349232	ISX	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr17_+_42785976_42786039	0.339844	ISX	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr19_-_14785674_14785685	0.339437	ISX	ENST00000253673.5|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chr6_-_111927449_111927482	0.333821	ISX	ENST00000368761.5|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000392556.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000340026.6|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr17_-_18266797_18266817	0.330636	ISX	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr2_-_183387430_183387465	0.325905	ISX	ENST00000410103.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr2_-_183387064_183387129	0.322847	ISX	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr19_+_12902289_12902310	0.317359	ISX	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr4_+_108911036_108911065	0.316087	ISX	ENST00000505878.1|HADH|ENSG00000138796.11|hydroxyacyl-CoA dehydrogenase
hg19_v2_chr1_-_36916066_36916092	0.306559	ISX	ENST00000315643.9|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr14_-_94789663_94789731	0.298116	ISX	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr8_+_7783859_7783859	0.288777	ISX	ENST00000400120.3|ZNF705B|ENSG00000215356.3|zinc finger protein 705B
hg19_v2_chr3_-_105588231_105588396	0.283891	ISX	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr8_-_7243080_7243080	0.280697	ISX	ENST00000400156.4|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr14_+_70233810_70233874	0.271826	ISX	ENST00000394366.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553548.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553369.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000557154.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000451983.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553635.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5
hg19_v2_chr1_-_36915880_36916004	0.269312	ISX	ENST00000445843.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr9_+_136501478_136501500	0.268322	ISX	ENST00000393056.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase) 	ENST00000263611.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase)
hg19_v2_chr17_-_18266660_18266756	0.261651	ISX	ENST00000582653.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000352886.6|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr11_-_124981475_124981659	0.256264	ISX	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr17_-_42277203_42277281	0.24974	ISX	ENST00000587097.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr12_+_52695617_52695649	0.247036	ISX	ENST00000293525.5|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chr4_-_138453606_138453673	0.243187	ISX	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr11_-_63381925_63381946	0.232269	ISX	ENST00000415826.1|PLA2G16|ENSG00000176485.6|phospholipase A2, group XVI
hg19_v2_chr17_+_40610862_40611087	0.226602	ISX	ENST00000393829.2|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000546249.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000537728.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000264649.6|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000585525.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000343619.4|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000544137.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000589727.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000587824.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1
hg19_v2_chr3_-_105587879_105587892	0.224174	ISX	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr11_+_95523621_95523710	0.223469	ISX	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr4_-_141348789_141348819	0.218735	ISX	ENST00000414773.1|CLGN|ENSG00000153132.8|calmegin
hg19_v2_chr3_-_15563229_15563265	0.218522	ISX	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr4_+_144303093_144303132	0.218288	ISX	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_+_130339710_130339745	0.21532	ISX	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr3_+_97868170_97868170	0.214493	ISX	ENST00000437310.1|OR5H14|ENSG00000236032.2|olfactory receptor, family 5, subfamily H, member 14
hg19_v2_chr10_-_99447024_99447080	0.204689	ISX	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr1_-_143913143_143913143	0.200986	ISX	ENST00000400889.1|FAM72D|ENSG00000215784.4|family with sequence similarity 72, member D
hg19_v2_chrX_-_24690771_24690794	0.197433	ISX	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr2_-_242089677_242089695	0.19611	ISX	ENST00000405260.1|PASK|ENSG00000115687.9|PAS domain containing serine/threonine kinase
hg19_v2_chr2_-_89247338_89247475	0.195924	ISX	ENST00000496168.1|IGKV1-5|ENSG00000243466.1|immunoglobulin kappa variable 1-5
hg19_v2_chr16_+_89160217_89160268	0.195027	ISX	ENST00000317447.4|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000537290.1|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3
hg19_v2_chr2_+_86947296_86947434	0.194498	ISX	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr1_+_206138457_206138503	0.189475	ISX	ENST00000367128.3|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A 	ENST00000431655.2|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A
hg19_v2_chr17_+_59489112_59489112	0.188645	ISX	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr1_+_120839005_120839031	0.188629	ISX	ENST00000369390.3|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B 	ENST00000452190.1|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B
hg19_v2_chr7_+_115862858_115863015	0.186274	ISX	ENST00000393481.2|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr2_+_177015122_177015122	0.183457	ISX	ENST00000468418.3|HOXD3|ENSG00000128652.7|homeobox D3
hg19_v2_chr5_+_140557371_140557371	0.172115	ISX	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr4_-_141348999_141349122	0.167199	ISX	ENST00000325617.5|CLGN|ENSG00000153132.8|calmegin
hg19_v2_chr14_+_32798547_32798606	0.166001	ISX	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr6_+_34204642_34204664	0.160563	ISX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr4_-_122686261_122686340	0.157786	ISX	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr2_+_242089833_242089913	0.157763	ISX	ENST00000404405.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000439916.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000406106.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000401987.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7
hg19_v2_chr1_-_161208013_161208092	0.155023	ISX	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_-_68698197_68698214	0.153494	ISX	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr22_-_29137771_29137837	0.152418	ISX	ENST00000439200.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000405598.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000398017.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000425190.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000348295.3|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382578.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382565.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382566.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382580.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000328354.6|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr17_-_7307358_7307456	0.149209	ISX	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr7_-_36764004_36764059	0.149055	ISX	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr6_+_36165133_36165229	0.14691	ISX	ENST00000446974.1|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3 	ENST00000454960.1|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr9_-_132383055_132383055	0.144802	ISX	ENST00000372478.4|C9orf50|ENSG00000179058.5|chromosome 9 open reading frame 50
hg19_v2_chr2_+_217524323_217524341	0.141813	ISX	ENST00000456764.1|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chr19_-_51071302_51071302	0.140025	ISX	ENST00000389201.3|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B 	ENST00000600381.1|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B
hg19_v2_chr12_-_10978957_10978957	0.139527	ISX	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chrX_+_77154935_77155012	0.139284	ISX	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr4_+_155702496_155702657	0.138436	ISX	ENST00000510397.1|RBM46|ENSG00000151962.3|RNA binding motif protein 46
hg19_v2_chr6_-_32095968_32096032	0.137972	ISX	ENST00000375203.3|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta 	ENST00000375201.4|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta
hg19_v2_chr6_+_3259148_3259294	0.133134	ISX	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr14_-_81425828_81425857	0.130165	ISX	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr2_-_96700664_96700673	0.125562	ISX	ENST00000359548.4|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000377137.3|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000439254.1|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000453542.1|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial
hg19_v2_chr9_+_104296122_104296161	0.125345	ISX	ENST00000389120.3|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr4_-_138453559_138453572	0.124504	ISX	ENST00000511115.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr6_+_53948328_53948338	0.123222	ISX	ENST00000370876.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr15_-_55700457_55700520	0.121183	ISX	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr20_+_9494987_9495027	0.119987	ISX	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr19_-_36001113_36001196	0.118183	ISX	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr1_+_87595433_87595457	0.117823	ISX	ENST00000469312.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140 	ENST00000490006.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140
hg19_v2_chr8_+_38831683_38831702	0.117583	ISX	ENST00000302495.4|HTRA4|ENSG00000169495.4|HtrA serine peptidase 4
hg19_v2_chrX_+_44703249_44703273	0.11714	ISX	ENST00000339042.4|DUSP21|ENSG00000189037.6|dual specificity phosphatase 21
hg19_v2_chr17_+_42786051_42786066	0.115011	ISX	ENST00000315005.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr19_+_4153598_4153665	0.114995	ISX	ENST00000078445.2|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000252587.3|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000595923.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602257.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602147.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3
hg19_v2_chr12_-_22063787_22063912	0.113295	ISX	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr7_+_50348268_50348366	0.112215	ISX	ENST00000438033.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000439701.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr1_-_190446759_190446774	0.112048	ISX	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr6_+_148663729_148663847	0.106872	ISX	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr10_-_105110831_105110885	0.10545	ISX	ENST00000337211.4|PCGF6|ENSG00000156374.10|polycomb group ring finger 6
hg19_v2_chr4_-_174255536_174255547	0.105447	ISX	ENST00000446922.2|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr6_-_85474219_85474237	0.104206	ISX	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr2_+_90248739_90248739	0.100183	ISX	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr1_-_153044083_153044088	0.0957799	ISX	ENST00000341611.2|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr1_-_112281875_112282046	0.0940685	ISX	ENST00000527621.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000534365.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000357260.5|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B
hg19_v2_chr17_+_73452545_73452685	0.092369	ISX	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr2_-_228244013_228244027	0.0921901	ISX	ENST00000304568.3|TM4SF20|ENSG00000168955.3|transmembrane 4 L six family member 20
hg19_v2_chr22_-_50523760_50523787	0.0916923	ISX	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr19_-_47137942_47137942	0.0903424	ISX	ENST00000300873.4|GNG8|ENSG00000167414.4|guanine nucleotide binding protein (G protein), gamma 8
hg19_v2_chr14_+_22670455_22670477	0.0901389	ISX	ENST00000390460.1|TRAV26-2|ENSG00000211812.1|T cell receptor alpha variable 26-2
hg19_v2_chr1_-_68698222_68698266	0.0893712	ISX	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr4_-_174255400_174255516	0.0887684	ISX	ENST00000506267.1|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr4_-_177190364_177190379	0.0886155	ISX	ENST00000296525.3|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr17_-_43045439_43045439	0.0876127	ISX	ENST00000253407.3|C1QL1|ENSG00000131094.3|complement component 1, q subcomponent-like 1
hg19_v2_chr6_-_33860521_33860556	0.0852806	ISX	ENST00000525746.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016 	ENST00000531046.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016
hg19_v2_chr15_+_58430567_58430589	0.0851192	ISX	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr15_-_55700522_55700708	0.0831935	ISX	ENST00000564092.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000310958.6|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr1_+_44115814_44115849	0.0822598	ISX	ENST00000372396.3|KDM4A|ENSG00000066135.8|lysine (K)-specific demethylase 4A
hg19_v2_chr6_+_160542821_160542852	0.0803539	ISX	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr7_+_142985308_142985453	0.0802938	ISX	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr12_-_50790267_50790405	0.078596	ISX	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr20_-_43133491_43133532	0.0783022	ISX	ENST00000411544.1|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chrX_+_130192318_130192331	0.0767522	ISX	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr2_+_172778952_172779004	0.0765846	ISX	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chr15_+_58430368_58430401	0.0763027	ISX	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr15_-_75199213_75199237	0.074691	ISX	ENST00000562698.1|FAM219B|ENSG00000178761.10|family with sequence similarity 219, member B
hg19_v2_chr5_+_159848807_159848847	0.0742921	ISX	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr2_-_89292422_89292450	0.0740904	ISX	ENST00000495489.1|IGKV1-8|ENSG00000240671.1|immunoglobulin kappa variable 1-8
hg19_v2_chr19_-_40931891_40931932	0.0735088	ISX	ENST00000357949.4|SERTAD1|ENSG00000197019.4|SERTA domain containing 1
hg19_v2_chr9_+_131452239_131452285	0.07315	ISX	ENST00000372688.4|SET|ENSG00000119335.12|SET nuclear oncogene 	ENST00000372686.5|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr17_-_40828969_40829024	0.0728327	ISX	ENST00000591022.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000587627.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000293349.6|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chr12_-_10955226_10955226	0.0721713	ISX	ENST00000240687.2|TAS2R7|ENSG00000121377.2|taste receptor, type 2, member 7
hg19_v2_chr10_-_56560939_56560950	0.0718464	ISX	ENST00000373955.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr2_-_183387283_183387304	0.0699875	ISX	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr13_+_40229764_40229869	0.0697631	ISX	ENST00000416691.1|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000422759.2|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000455146.3|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6
hg19_v2_chr6_+_160542870_160542968	0.0689055	ISX	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr8_+_9413410_9413451	0.0676149	ISX	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr8_+_110552046_110552069	0.0668585	ISX	ENST00000529931.1|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr3_-_149095652_149095652	0.0666742	ISX	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr4_+_87515454_87515486	0.0659753	ISX	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr22_+_24322322_24322387	0.0656376	ISX	ENST00000215780.5|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2 	ENST00000402588.3|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2
hg19_v2_chr20_-_50418947_50418964	0.064903	ISX	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr10_+_91461337_91461380	0.0648598	ISX	ENST00000260753.4|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000416354.1|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000394289.2|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000371728.3|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr11_-_62521614_62521660	0.0635208	ISX	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chrX_+_43515467_43515562	0.0631219	ISX	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr11_-_63381823_63381841	0.0629907	ISX	ENST00000323646.5|PLA2G16|ENSG00000176485.6|phospholipase A2, group XVI
hg19_v2_chr3_-_151034734_151034745	0.062248	ISX	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr22_+_21400229_21400276	0.0617663	ISX	ENST00000342608.4|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000543388.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000442047.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891
hg19_v2_chr14_+_22771851_22771939	0.0606072	ISX	ENST00000390466.1|TRAV39|ENSG00000211818.1|T cell receptor alpha variable 39
hg19_v2_chr22_-_24316648_24316773	0.0605037	ISX	ENST00000403754.3|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000430101.2|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000398344.4|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr10_-_99205607_99205779	0.0604198	ISX	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr14_+_104182105_104182184	0.0602203	ISX	ENST00000311141.2|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr5_+_174151536_174151610	0.0584172	ISX	ENST00000239243.6|MSX2|ENSG00000120149.7|msh homeobox 2 	ENST00000507785.1|MSX2|ENSG00000120149.7|msh homeobox 2
hg19_v2_chrX_+_8432871_8432871	0.0576305	ISX	ENST00000381032.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000453306.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000444481.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B
hg19_v2_chr1_-_150849208_150849244	0.0567132	ISX	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr6_+_73076432_73076455	0.056261	ISX	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr5_+_159848854_159848917	0.054438	ISX	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr11_+_77532233_77532244	0.0537103	ISX	ENST00000525409.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing
hg19_v2_chr20_-_50418972_50419029	0.0536878	ISX	ENST00000395997.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr16_-_31105870_31106005	0.052596	ISX	ENST00000394971.3|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr14_+_104182061_104182072	0.0525147	ISX	ENST00000216602.6|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr11_-_62414070_62414104	0.0523175	ISX	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr6_-_119256311_119256335	0.0504515	ISX	ENST00000316316.6|MCM9|ENSG00000111877.13|minichromosome maintenance complex component 9
hg19_v2_chrX_-_21676442_21676453	0.0503532	ISX	ENST00000379499.2|KLHL34|ENSG00000185915.4|kelch-like family member 34
hg19_v2_chr1_+_62902308_62902335	0.0492346	ISX	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr2_-_3521518_3521518	0.0490888	ISX	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr6_+_39760129_39760177	0.0488658	ISX	ENST00000274867.4|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2
hg19_v2_chr6_+_64345698_64345750	0.0483383	ISX	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr9_-_4666421_4666492	0.0472538	ISX	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr18_-_67624160_67624238	0.0467597	ISX	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr20_+_44441304_44441319	0.0466981	ISX	ENST00000352551.5|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr6_-_30080876_30080883	0.0465721	ISX	ENST00000376734.3|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr17_-_57229155_57229198	0.0457639	ISX	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr5_-_159846399_159846412	0.0449132	ISX	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr22_-_24303340_24303373	0.04398	ISX	ENST00000404172.3|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene) 	ENST00000290765.4|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene)
hg19_v2_chr6_-_33385870_33385899	0.043819	ISX	ENST00000488034.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr16_-_31106048_31106124	0.0437814	ISX	ENST00000300851.6|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr16_+_3070313_3070347	0.0426687	ISX	ENST00000326577.4|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr16_+_1359511_1359804	0.0416871	ISX	ENST00000397514.3|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000397515.2|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000567383.1|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000403747.2|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000566587.1|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I
hg19_v2_chr11_-_111741994_111742058	0.0411719	ISX	ENST00000398006.2|ALG9|ENSG00000086848.10|ALG9, alpha-1,2-mannosyltransferase
hg19_v2_chr22_+_24309089_24309089	0.0407568	ISX	ENST00000215770.5|DDTL|ENSG00000099974.7|D-dopachrome tautomerase-like
hg19_v2_chr6_-_135271260_135271272	0.0399978	ISX	ENST00000265605.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr14_-_20801427_20801457	0.0397687	ISX	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chr4_-_100242549_100242564	0.0397188	ISX	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chrX_-_8139308_8139308	0.0385541	ISX	ENST00000317103.4|VCX2|ENSG00000177504.9|variable charge, X-linked 2
hg19_v2_chr6_-_33385823_33385852	0.0385234	ISX	ENST00000494751.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli) 	ENST00000374496.3|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr1_-_159915386_159915426	0.0382744	ISX	ENST00000361509.3|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9 	ENST00000368094.1|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9
hg19_v2_chr20_+_44441215_44441255	0.0378686	ISX	ENST00000356455.4|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C 	ENST00000405520.1|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr16_-_31106211_31106315	0.0374244	ISX	ENST00000532364.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000319788.7|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000529564.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000354895.4|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000394975.2|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr4_-_70080449_70080449	0.0370133	ISX	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr6_-_33385854_33385866	0.0368584	ISX	ENST00000488478.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chrX_-_153363188_153363212	0.0363681	ISX	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr19_+_1275917_1275952	0.0360283	ISX	ENST00000469144.1|C19orf24|ENSG00000228300.9|chromosome 19 open reading frame 24
hg19_v2_chr16_+_12059050_12059079	0.0358304	ISX	ENST00000396495.3|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr6_-_33385902_33386094	0.0357737	ISX	ENST00000374500.5|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr7_-_92107229_92107265	0.0356107	ISX	ENST00000603053.1|ERVW-1|ENSG00000242950.2|endogenous retrovirus group W, member 1
hg19_v2_chr12_-_120966943_120966985	0.0351252	ISX	ENST00000552443.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547736.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000445328.2|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547943.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000288532.6|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
hg19_v2_chr6_-_135271219_135271257	0.0347974	ISX	ENST00000367847.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1 	ENST00000367845.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr11_+_77532155_77532210	0.0346521	ISX	ENST00000532481.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing 	ENST00000526415.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing 	ENST00000393427.2|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing 	ENST00000527134.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing 	ENST00000304716.8|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing
hg19_v2_chr16_+_89160269_89160349	0.0344368	ISX	ENST00000540697.1|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000406948.3|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000378345.4|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000541755.2|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3
hg19_v2_chr4_-_66536057_66536071	0.0332378	ISX	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr16_-_55866997_55867098	0.0330488	ISX	ENST00000360526.3|CES1|ENSG00000198848.8|carboxylesterase 1 	ENST00000361503.4|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr1_+_23345943_23346051	0.0323314	ISX	ENST00000400181.4|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A 	ENST00000542151.1|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A
hg19_v2_chr6_-_33385655_33385719	0.0316531	ISX	ENST00000440279.3|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli) 	ENST00000607266.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr16_-_58585513_58585670	0.0315006	ISX	ENST00000245138.4|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000567285.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr5_-_177580933_177580968	0.0310864	ISX	ENST00000274606.3|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr16_+_3070356_3070383	0.0295913	ISX	ENST00000341627.5|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575124.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575836.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr1_+_23345930_23345941	0.0289485	ISX	ENST00000356634.3|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A
hg19_v2_chr3_+_148709128_148709301	0.028792	ISX	ENST00000345003.4|GYG1|ENSG00000163754.13|glycogenin 1 	ENST00000296048.6|GYG1|ENSG00000163754.13|glycogenin 1 	ENST00000483267.1|GYG1|ENSG00000163754.13|glycogenin 1
hg19_v2_chr10_+_1095416_1095482	0.0275561	ISX	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr7_+_70597109_70597155	0.0259897	ISX	ENST00000333538.5|WBSCR17|ENSG00000185274.7|Williams-Beuren syndrome chromosome region 17
hg19_v2_chr17_-_45266542_45266683	0.0257713	ISX	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr2_+_87135076_87135076	0.0255678	ISX	ENST00000409776.2|RGPD1|ENSG00000187627.10|RANBP2-like and GRIP domain containing 1
hg19_v2_chr17_-_38821373_38821440	0.0254588	ISX	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr3_+_140396881_140396887	0.0252629	ISX	ENST00000286349.3|TRIM42|ENSG00000155890.3|tripartite motif containing 42
hg19_v2_chr4_+_48018781_48018816	0.0245835	ISX	ENST00000295461.5|NIPAL1|ENSG00000163293.7|NIPA-like domain containing 1
hg19_v2_chr17_+_45286706_45286766	0.0237741	ISX	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr2_-_198540719_198540748	0.0227477	ISX	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr3_+_28390637_28390705	0.0210155	ISX	ENST00000420223.1|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2 	ENST00000383768.2|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2
hg19_v2_chr3_-_129147432_129147494	0.0208855	ISX	ENST00000503957.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000505956.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000326085.3|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12
hg19_v2_chr15_-_58571445_58571478	0.020793	ISX	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr14_-_51027838_51027851	0.0200804	ISX	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr3_+_111393501_111393538	0.0182642	ISX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr6_-_30080863_30080872	0.0172907	ISX	ENST00000540829.1|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr12_-_103310987_103311037	0.0165082	ISX	ENST00000307000.2|PAH|ENSG00000171759.4|phenylalanine hydroxylase
hg19_v2_chr2_+_135809835_135809874	0.0145161	ISX	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr17_+_45286387_45286455	0.0141006	ISX	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr1_-_205819245_205819272	0.0137241	ISX	ENST00000367136.4|PM20D1|ENSG00000162877.8|peptidase M20 domain containing 1
hg19_v2_chr12_+_104680659_104680777	0.0136279	ISX	ENST00000526691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000388854.3|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000354940.6|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000526390.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531689.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr6_-_31125850_31126015	0.0134125	ISX	ENST00000507751.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448162.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000502557.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503420.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507892.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507226.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000513222.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503934.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000396263.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000508683.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000428174.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448141.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507829.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000455279.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000376266.5|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1
hg19_v2_chr3_+_115342349_115342373	0.0124547	ISX	ENST00000393780.3|GAP43|ENSG00000172020.8|growth associated protein 43
hg19_v2_chr22_+_17956618_17956637	0.0123949	ISX	ENST00000262608.8|CECR2|ENSG00000099954.14|cat eye syndrome chromosome region, candidate 2
hg19_v2_chr22_-_32767017_32767063	0.0119991	ISX	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr14_+_32798462_32798539	0.0117791	ISX	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr1_+_220267429_220267510	0.0115673	ISX	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr3_+_186288454_186288535	0.0109619	ISX	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr20_+_44441271_44441297	0.0107534	ISX	ENST00000335046.3|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C 	ENST00000243893.6|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr6_-_39693111_39693217	0.00918871	ISX	ENST00000373215.3|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000538893.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000287152.7|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000373216.3|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr16_-_55867146_55867249	0.0071362	ISX	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chrX_-_6453159_6453159	0.00707839	ISX	ENST00000381089.3|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A 	ENST00000398729.1|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A
hg19_v2_chr22_-_32766972_32766996	0.00682024	ISX	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr2_+_204571375_204571432	0.00523427	ISX	ENST00000374478.4|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr1_-_197115818_197115829	0.0043308	ISX	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr1_+_151735431_151735446	0.00380149	ISX	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr20_-_50419055_50419066	0.00294263	ISX	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr7_+_144052381_144052509	0.00182786	ISX	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr19_-_10227503_10227591	0.00165885	ISX	ENST00000593054.1|EIF3G|ENSG00000130811.6|eukaryotic translation initiation factor 3, subunit G
hg19_v2_chr11_+_63953587_63953685	0.00096562	ISX	ENST00000305218.4|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1 	ENST00000538945.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr10_-_28571015_28571067	0.000875167	ISX	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr6_-_49681235_49681274	0.00026979	ISX	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr4_-_69434245_69434245	7.59855e-05	ISX	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
