hg19_v2_chr3_-_112127981_112128034	1.69189	MSX2	ENST00000486726.2|RP11-231E6.1|ENSG00000243081.2|RP11-231E6.1
hg19_v2_chr12_-_10022735_10022735	1.18163	MSX2	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr4_-_138453606_138453673	0.879506	MSX2	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr6_-_111927062_111927125	0.820071	MSX2	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr5_-_31532160_31532221	0.656522	MSX2	ENST00000511367.2|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III 	ENST00000513349.1|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III
hg19_v2_chr12_+_9102632_9102708	0.611581	MSX2	ENST00000539240.1|KLRG1|ENSG00000139187.5|killer cell lectin-like receptor subfamily G, member 1
hg19_v2_chr6_-_111927449_111927482	0.586617	MSX2	ENST00000368761.5|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000392556.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000340026.6|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr11_-_124981475_124981659	0.57637	MSX2	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr6_+_130339710_130339745	0.562915	MSX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr3_-_141747950_141748004	0.519868	MSX2	ENST00000497579.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr1_-_94050668_94050724	0.415099	MSX2	ENST00000539242.1|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr10_-_105110831_105110885	0.405891	MSX2	ENST00000337211.4|PCGF6|ENSG00000156374.10|polycomb group ring finger 6
hg19_v2_chr3_-_151034734_151034745	0.40504	MSX2	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr10_-_72142345_72142395	0.375852	MSX2	ENST00000373224.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000446961.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000358141.2|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000357631.2|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20
hg19_v2_chr1_-_21377383_21377395	0.370999	MSX2	ENST00000374935.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr10_-_105110890_105110914	0.357161	MSX2	ENST00000369847.3|PCGF6|ENSG00000156374.10|polycomb group ring finger 6
hg19_v2_chr12_+_52695617_52695649	0.333555	MSX2	ENST00000293525.5|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chr7_+_99717230_99717321	0.322911	MSX2	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chr19_-_41985048_41985051	0.322897	MSX2	ENST00000599801.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000595063.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000598215.1|AC011526.1|ENSG00000267107.2|AC011526.1
hg19_v2_chr19_+_41869894_41869961	0.312135	MSX2	ENST00000413014.2|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr2_-_55646957_55647027	0.301333	MSX2	ENST00000263630.8|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr20_-_50418947_50418964	0.299633	MSX2	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr2_-_55647057_55647082	0.295062	MSX2	ENST00000436346.1|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr8_+_1993152_1993168	0.29254	MSX2	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr12_-_9102549_9102591	0.290415	MSX2	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr5_+_31532373_31532479	0.289855	MSX2	ENST00000325366.9|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000355907.3|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000507818.2|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22
hg19_v2_chr20_-_50418972_50419029	0.28704	MSX2	ENST00000395997.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr6_-_31830655_31830683	0.285592	MSX2	ENST00000375631.4|NEU1|ENSG00000204386.6|sialidase 1 (lysosomal sialidase)
hg19_v2_chr1_-_68698197_68698214	0.281907	MSX2	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr2_-_89292422_89292450	0.264272	MSX2	ENST00000495489.1|IGKV1-8|ENSG00000240671.1|immunoglobulin kappa variable 1-8
hg19_v2_chr2_-_73460334_73460405	0.25543	MSX2	ENST00000258083.2|PRADC1|ENSG00000135617.3|protease-associated domain containing 1
hg19_v2_chr8_+_1993173_1993199	0.250124	MSX2	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr7_+_91570165_91570197	0.247357	MSX2	ENST00000356239.3|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000359028.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000358100.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9
hg19_v2_chr7_+_100209979_100210053	0.233823	MSX2	ENST00000493970.1|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000379527.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr3_-_114866084_114866118	0.222167	MSX2	ENST00000357258.3|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_+_71587669_71587752	0.21904	MSX2	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr1_-_151431647_151431669	0.214473	MSX2	ENST00000368863.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000409503.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000491586.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000533351.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000540984.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr7_+_100210133_100210214	0.208635	MSX2	ENST00000393950.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000424091.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr17_-_46716647_46716665	0.204361	MSX2	ENST00000608940.1|RP11-357H14.17|ENSG00000272763.1|RP11-357H14.17
hg19_v2_chr4_-_138453559_138453572	0.197324	MSX2	ENST00000511115.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr1_-_68698222_68698266	0.196521	MSX2	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr3_-_48672859_48672926	0.191312	MSX2	ENST00000395550.2|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000455886.2|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000431739.1|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000426599.1|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000383733.3|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000420764.2|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6 	ENST00000337000.8|SLC26A6|ENSG00000225697.6|solute carrier family 26 (anion exchanger), member 6
hg19_v2_chr7_+_100209725_100209824	0.190888	MSX2	ENST00000223054.4|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chrX_+_77154935_77155012	0.183745	MSX2	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr15_-_37393406_37393528	0.180098	MSX2	ENST00000338564.5|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000558313.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000340545.5|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr1_-_151762943_151763012	0.179285	MSX2	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr2_-_89340242_89340242	0.178788	MSX2	ENST00000480492.1|IGKV1-12|ENSG00000243290.1|immunoglobulin kappa variable 1-12
hg19_v2_chr18_+_39535152_39535232	0.177167	MSX2	ENST00000262039.4|PIK3C3|ENSG00000078142.7|phosphatidylinositol 3-kinase, catalytic subunit type 3 	ENST00000398870.3|PIK3C3|ENSG00000078142.7|phosphatidylinositol 3-kinase, catalytic subunit type 3 	ENST00000586545.1|PIK3C3|ENSG00000078142.7|phosphatidylinositol 3-kinase, catalytic subunit type 3
hg19_v2_chr1_+_44115814_44115849	0.174411	MSX2	ENST00000372396.3|KDM4A|ENSG00000066135.8|lysine (K)-specific demethylase 4A
hg19_v2_chr19_-_47137942_47137942	0.166336	MSX2	ENST00000300873.4|GNG8|ENSG00000167414.4|guanine nucleotide binding protein (G protein), gamma 8
hg19_v2_chr19_+_42817527_42817546	0.165668	MSX2	ENST00000598766.1|TMEM145|ENSG00000167619.7|transmembrane protein 145
hg19_v2_chr11_+_17298255_17298296	0.161276	MSX2	ENST00000531172.1|NUCB2|ENSG00000070081.11|nucleobindin 2 	ENST00000533738.2|NUCB2|ENSG00000070081.11|nucleobindin 2 	ENST00000323688.6|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr11_+_67250490_67250527	0.155876	MSX2	ENST00000528641.2|AIP|ENSG00000110711.5|aryl hydrocarbon receptor interacting protein 	ENST00000279146.3|AIP|ENSG00000110711.5|aryl hydrocarbon receptor interacting protein
hg19_v2_chr11_+_17298297_17298341	0.150074	MSX2	ENST00000529010.1|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr1_-_151965048_151965062	0.143504	MSX2	ENST00000368809.1|S100A10|ENSG00000197747.4|S100 calcium binding protein A10
hg19_v2_chr8_+_9413410_9413451	0.1434	MSX2	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr7_+_130794846_130794873	0.142506	MSX2	ENST00000421797.2|MKLN1|ENSG00000128585.13|muskelin 1, intracellular mediator containing kelch motifs
hg19_v2_chr11_-_102323740_102323780	0.14212	MSX2	ENST00000398136.2|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr17_+_42264556_42264649	0.137715	MSX2	ENST00000319511.6|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589785.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000592825.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589184.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr19_+_17378278_17378311	0.137456	MSX2	ENST00000596335.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000601436.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000595632.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1
hg19_v2_chr12_+_28410128_28410133	0.135644	MSX2	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr14_+_32798547_32798606	0.13523	MSX2	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr8_+_38831683_38831702	0.133357	MSX2	ENST00000302495.4|HTRA4|ENSG00000169495.4|HtrA serine peptidase 4
hg19_v2_chr1_+_151735431_151735446	0.131814	MSX2	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr11_+_108535752_108535841	0.129999	MSX2	ENST00000322536.3|DDX10|ENSG00000178105.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
hg19_v2_chr18_-_44181442_44181479	0.127391	MSX2	ENST00000398722.4|LOXHD1|ENSG00000167210.12|lipoxygenase homology domains 1
hg19_v2_chr19_+_17378159_17378275	0.125483	MSX2	ENST00000598188.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000359435.4|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000599474.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000599057.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000601043.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000447614.2|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1
hg19_v2_chr11_-_121986923_121986923	0.122196	MSX2	ENST00000560104.1|BLID|ENSG00000259571.1|BH3-like motif containing, cell death inducer
hg19_v2_chr6_+_160183492_160183523	0.119067	MSX2	ENST00000541436.1|ACAT2|ENSG00000120437.7|acetyl-CoA acetyltransferase 2
hg19_v2_chr10_-_99447024_99447080	0.118101	MSX2	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr2_+_90248739_90248739	0.117297	MSX2	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr1_-_228613026_228613065	0.113945	MSX2	ENST00000366696.1|HIST3H3|ENSG00000168148.3|histone cluster 3, H3
hg19_v2_chr1_-_151431909_151431987	0.10852	MSX2	ENST00000361398.3|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000271715.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr4_-_46996424_46996424	0.107529	MSX2	ENST00000264318.3|GABRA4|ENSG00000109158.6|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v2_chr1_-_36916066_36916092	0.107147	MSX2	ENST00000315643.9|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr19_+_4007644_4007699	0.106316	MSX2	ENST00000262971.2|PIAS4|ENSG00000105229.2|protein inhibitor of activated STAT, 4
hg19_v2_chr17_+_12569306_12569344	0.101986	MSX2	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chrX_+_130192318_130192331	0.0986084	MSX2	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr6_+_53948328_53948338	0.0983353	MSX2	ENST00000370876.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr1_-_232651312_232651312	0.0937847	MSX2	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr3_+_186353756_186353761	0.0918139	MSX2	ENST00000431018.1|FETUB|ENSG00000090512.7|fetuin B 	ENST00000450521.1|FETUB|ENSG00000090512.7|fetuin B 	ENST00000539949.1|FETUB|ENSG00000090512.7|fetuin B
hg19_v2_chr1_+_11714914_11714976	0.0885755	MSX2	ENST00000425796.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376770.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376768.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000251547.5|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376760.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376762.4|FBXO44|ENSG00000132879.9|F-box protein 44
hg19_v2_chr7_-_99716952_99717021	0.0843883	MSX2	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr7_+_48211048_48211063	0.0831431	MSX2	ENST00000435803.1|ABCA13|ENSG00000179869.10|ATP-binding cassette, sub-family A (ABC1), member 13
hg19_v2_chr19_-_19249255_19249322	0.0819544	MSX2	ENST00000587583.2|TMEM161A|ENSG00000064545.10|transmembrane protein 161A 	ENST00000450333.2|TMEM161A|ENSG00000064545.10|transmembrane protein 161A 	ENST00000587096.1|TMEM161A|ENSG00000064545.10|transmembrane protein 161A 	ENST00000162044.9|TMEM161A|ENSG00000064545.10|transmembrane protein 161A 	ENST00000592369.1|TMEM161A|ENSG00000064545.10|transmembrane protein 161A 	ENST00000587915.1|TMEM161A|ENSG00000064545.10|transmembrane protein 161A
hg19_v2_chr14_+_39736582_39736618	0.0813584	MSX2	ENST00000556148.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000348007.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr20_-_50419055_50419066	0.0801965	MSX2	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr12_+_54718904_54718936	0.0799223	MSX2	ENST00000262061.2|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000549043.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000552218.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000553231.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000552362.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000455864.2|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000416254.2|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000549116.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1 	ENST00000551779.1|COPZ1|ENSG00000111481.5|coatomer protein complex, subunit zeta 1
hg19_v2_chr7_-_99717463_99717483	0.0717833	MSX2	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr1_-_36915880_36916004	0.069376	MSX2	ENST00000445843.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr20_+_49126881_49126936	0.063526	MSX2	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr4_-_69434245_69434245	0.0622697	MSX2	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v2_chr15_+_80351910_80351955	0.0610483	MSX2	ENST00000261749.6|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561060.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr10_-_99205607_99205779	0.0598138	MSX2	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr16_+_58783542_58783581	0.0589589	MSX2	ENST00000500117.1|RP11-410D17.2|ENSG00000245768.2|RP11-410D17.2	ENST00000565722.1|RP11-410D17.2|ENSG00000245768.2|RP11-410D17.2
hg19_v2_chr10_-_56561022_56561051	0.0579846	MSX2	ENST00000373965.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000414778.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395438.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000409834.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395445.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395446.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395442.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395440.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395432.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000361849.3|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395433.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000320301.6|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395430.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000437009.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr20_+_56964169_56964182	0.0577409	MSX2	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr14_+_65381079_65381212	0.0551252	MSX2	ENST00000549115.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000607599.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000548752.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000359118.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000552002.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551947.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551093.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000542227.1|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000447296.2|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000549987.1|CHURC1-FNTB|ENSG00000125954.8|CHURC1-FNTB readthrough
hg19_v2_chr3_-_164796269_164796290	0.0544497	MSX2	ENST00000264382.3|SI|ENSG00000090402.3|sucrase-isomaltase (alpha-glucosidase)
hg19_v2_chr21_-_32253874_32253899	0.0544428	MSX2	ENST00000332378.4|KRTAP11-1|ENSG00000182591.4|keratin associated protein 11-1
hg19_v2_chr20_+_54967409_54967501	0.0541039	MSX2	ENST00000415828.1|CSTF1|ENSG00000101138.7|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 	ENST00000217109.4|CSTF1|ENSG00000101138.7|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 	ENST00000428552.1|CSTF1|ENSG00000101138.7|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
hg19_v2_chr1_-_190446759_190446774	0.0537132	MSX2	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr2_+_172864490_172864490	0.0523353	MSX2	ENST00000315796.4|METAP1D|ENSG00000172878.9|methionyl aminopeptidase type 1D (mitochondrial)
hg19_v2_chr6_-_116833500_116833511	0.0465316	MSX2	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr12_-_95397442_95397546	0.0461529	MSX2	ENST00000547157.1|NDUFA12|ENSG00000184752.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENST00000547986.1|NDUFA12|ENSG00000184752.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENST00000327772.2|NDUFA12|ENSG00000184752.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
hg19_v2_chr5_+_150639360_150639450	0.0442449	MSX2	ENST00000523004.1|GM2A|ENSG00000196743.4|GM2 ganglioside activator
hg19_v2_chr5_+_140557371_140557371	0.0420109	MSX2	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr10_-_56560939_56560950	0.039149	MSX2	ENST00000373955.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr1_-_23694794_23694879	0.0362113	MSX2	ENST00000374608.3|ZNF436|ENSG00000125945.10|zinc finger protein 436
hg19_v2_chr1_+_152943122_152943142	0.0340401	MSX2	ENST00000328051.2|SPRR4|ENSG00000184148.3|small proline-rich protein 4
hg19_v2_chr3_+_140396881_140396887	0.027202	MSX2	ENST00000286349.3|TRIM42|ENSG00000155890.3|tripartite motif containing 42
hg19_v2_chr10_-_28571015_28571067	0.0230875	MSX2	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr6_+_25652501_25652632	0.0212355	MSX2	ENST00000334979.6|SCGN|ENSG00000079689.9|secretagogin, EF-hand calcium binding protein
hg19_v2_chr12_-_10955226_10955226	0.0197265	MSX2	ENST00000240687.2|TAS2R7|ENSG00000121377.2|taste receptor, type 2, member 7
hg19_v2_chr17_-_38574169_38574202	0.0194554	MSX2	ENST00000423485.1|TOP2A|ENSG00000131747.10|topoisomerase (DNA) II alpha 170kDa
hg19_v2_chr11_-_71823715_71823792	0.0187142	MSX2	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr9_-_4666421_4666492	0.0143936	MSX2	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr14_-_23504337_23504369	0.012646	MSX2	ENST00000361611.6|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr19_+_11485333_11485367	0.011867	MSX2	ENST00000312423.2|SWSAP1|ENSG00000173928.2|SWIM-type zinc finger 7 associated protein 1
hg19_v2_chr16_+_53133070_53133081	0.0113429	MSX2	ENST00000565832.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr17_-_10372875_10372876	0.0104262	MSX2	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chrX_+_89176881_89176955	0.00968076	MSX2	ENST00000283891.5|TGIF2LX|ENSG00000153779.8|TGFB-induced factor homeobox 2-like, X-linked 	ENST00000561129.2|TGIF2LX|ENSG00000153779.8|TGFB-induced factor homeobox 2-like, X-linked
hg19_v2_chr8_+_92261516_92261555	0.00905176	MSX2	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr3_+_113251143_113251263	0.00538065	MSX2	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr17_-_9929581_9929626	0.00440615	MSX2	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr19_-_10121144_10121155	0.00389937	MSX2	ENST00000264828.3|COL5A3|ENSG00000080573.6|collagen, type V, alpha 3
hg19_v2_chrX_+_70752917_70752933	0.00380174	MSX2	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr9_+_124329336_124329406	0.00300831	MSX2	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr14_-_23504432_23504448	0.00119264	MSX2	ENST00000425762.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr14_+_22670455_22670477	0.00073033	MSX2	ENST00000390460.1|TRAV26-2|ENSG00000211812.1|T cell receptor alpha variable 26-2
