hg19_v2_chr2_+_102972363_102972389	1.43	PAX4	ENST00000409599.1|IL18R1|ENSG00000115604.6|interleukin 18 receptor 1
hg19_v2_chr12_+_121570631_121570774	0.966345	PAX4	ENST00000546057.1|P2RX7|ENSG00000089041.12|purinergic receptor P2X, ligand-gated ion channel, 7 	ENST00000377162.2|P2RX7|ENSG00000089041.12|purinergic receptor P2X, ligand-gated ion channel, 7 	ENST00000328963.5|P2RX7|ENSG00000089041.12|purinergic receptor P2X, ligand-gated ion channel, 7 	ENST00000535250.1|P2RX7|ENSG00000089041.12|purinergic receptor P2X, ligand-gated ion channel, 7 	ENST00000541446.1|P2RX7|ENSG00000089041.12|purinergic receptor P2X, ligand-gated ion channel, 7
hg19_v2_chr9_-_123676827_123676865	0.898565	PAX4	ENST00000546084.1|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chr7_-_22259845_22259864	0.752215	PAX4	ENST00000420196.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr7_-_139763521_139763521	0.721764	PAX4	ENST00000263549.3|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr6_-_32806506_32806599	0.675897	PAX4	ENST00000374897.2|TAP2|ENSG00000204267.9|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 	ENST00000452392.2|TAP2|ENSG00000250264.1|Uncharacterized protein
hg19_v2_chr3_+_111805182_111805210	0.659697	PAX4	ENST00000430855.1|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000431717.2|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000264848.5|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52
hg19_v2_chr16_-_28621353_28621379	0.654563	PAX4	ENST00000567512.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr3_-_79816965_79817094	0.615519	PAX4	ENST00000464233.1|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr6_+_31553901_31553956	0.565003	PAX4	ENST00000418507.2|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000438075.2|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000376100.3|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000376111.4|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr21_+_26934165_26934221	0.550651	PAX4	ENST00000456917.1|MIR155HG|ENSG00000234883.2|MIR155 host gene (non-protein coding)
hg19_v2_chr6_+_31553978_31554060	0.549791	PAX4	ENST00000376096.1|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000376099.1|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000376110.3|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr16_+_50730910_50731050	0.442876	PAX4	ENST00000300589.2|NOD2|ENSG00000167207.7|nucleotide-binding oligomerization domain containing 2
hg19_v2_chr3_-_123339418_123339473	0.43693	PAX4	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr3_-_123339343_123339401	0.426906	PAX4	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr6_+_31554636_31554678	0.421767	PAX4	ENST00000433492.1|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr1_+_152881014_152881031	0.418583	PAX4	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr4_-_169931231_169931286	0.393357	PAX4	ENST00000504561.1|CBR4|ENSG00000145439.7|carbonyl reductase 4
hg19_v2_chr5_-_13944652_13944652	0.343928	PAX4	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr20_-_18810797_18810797	0.339829	PAX4	ENST00000278779.4|C20orf78|ENSG00000149443.4|chromosome 20 open reading frame 78
hg19_v2_chr6_+_31554456_31554512	0.334507	PAX4	ENST00000339530.4|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr8_-_623547_623657	0.33078	PAX4	ENST00000522893.1|ERICH1|ENSG00000104714.9|glutamate-rich 1
hg19_v2_chr1_+_15480197_15480285	0.32467	PAX4	ENST00000400796.3|TMEM51|ENSG00000171729.9|transmembrane protein 51 	ENST00000434578.2|TMEM51|ENSG00000171729.9|transmembrane protein 51 	ENST00000376008.2|TMEM51|ENSG00000171729.9|transmembrane protein 51
hg19_v2_chr17_+_47448102_47448102	0.322385	PAX4	ENST00000576461.1|RP11-81K2.1|ENSG00000262039.1|Uncharacterized protein
hg19_v2_chr6_-_90062543_90062567	0.317685	PAX4	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr10_-_25012115_25012174	0.301404	PAX4	ENST00000446003.1|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chrX_+_110187513_110187538	0.299281	PAX4	ENST00000446737.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000425146.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr5_-_133304473_133304489	0.296474	PAX4	ENST00000231512.3|C5orf15|ENSG00000113583.6|chromosome 5 open reading frame 15
hg19_v2_chr3_-_4793274_4793312	0.295632	PAX4	ENST00000414938.1|EGOT|ENSG00000235947.1|eosinophil granule ontogeny transcript (non-protein coding)
hg19_v2_chr8_+_17434689_17434763	0.294594	PAX4	ENST00000398074.3|PDGFRL|ENSG00000104213.8|platelet-derived growth factor receptor-like
hg19_v2_chr1_-_228594490_228594561	0.28772	PAX4	ENST00000366699.3|TRIM11|ENSG00000154370.9|tripartite motif containing 11 	ENST00000284551.6|TRIM11|ENSG00000154370.9|tripartite motif containing 11
hg19_v2_chr7_+_26191809_26191890	0.28376	PAX4	ENST00000056233.3|NFE2L3|ENSG00000050344.8|nuclear factor, erythroid 2-like 3
hg19_v2_chr3_-_71632894_71632909	0.278847	PAX4	ENST00000493089.1|FOXP1|ENSG00000114861.14|forkhead box P1
hg19_v2_chr11_-_114466471_114466474	0.27843	PAX4	ENST00000424261.2|NXPE4|ENSG00000137634.5|neurexophilin and PC-esterase domain family, member 4
hg19_v2_chr2_-_217559517_217559566	0.277568	PAX4	ENST00000449583.1|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr1_+_168756151_168756177	0.277431	PAX4	ENST00000420691.1|LINC00626|ENSG00000225826.1|long intergenic non-protein coding RNA 626
hg19_v2_chr12_+_122181529_122181562	0.276887	PAX4	ENST00000541467.1|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr11_-_35440579_35440617	0.275185	PAX4	ENST00000606205.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr18_-_5396271_5396333	0.262684	PAX4	ENST00000579951.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr17_-_77005860_77005949	0.261826	PAX4	ENST00000591773.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000588611.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000586916.2|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000592033.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000588075.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000302345.2|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000591811.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr12_-_13248598_13248630	0.26125	PAX4	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr6_+_31515337_31515420	0.259646	PAX4	ENST00000376148.4|NFKBIL1|ENSG00000204498.6|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 	ENST00000376145.4|NFKBIL1|ENSG00000204498.6|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v2_chr21_+_43933946_43934024	0.258252	PAX4	ENST00000352133.2|SLC37A1|ENSG00000160190.9|solute carrier family 37 (glucose-6-phosphate transporter), member 1
hg19_v2_chr7_-_23053719_23053767	0.254324	PAX4	ENST00000432176.2|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000440481.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr12_+_123717458_123717464	0.254051	PAX4	ENST00000253233.1|C12orf65|ENSG00000130921.3|chromosome 12 open reading frame 65
hg19_v2_chr17_-_77005801_77005812	0.253291	PAX4	ENST00000392446.5|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr16_-_28608364_28608377	0.253087	PAX4	ENST00000533150.1|SULT1A2|ENSG00000197165.6|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
hg19_v2_chr6_+_31554612_31554629	0.245939	PAX4	ENST00000211921.7|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr5_+_143584814_143584840	0.245554	PAX4	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr1_+_244816371_244816443	0.243683	PAX4	ENST00000263831.7|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr7_-_137686791_137686821	0.239667	PAX4	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr15_-_82641706_82641706	0.234988	PAX4	ENST00000439287.4|GOLGA6L10|ENSG00000205281.6|golgin A6 family-like 10
hg19_v2_chr10_-_70092635_70092666	0.233341	PAX4	ENST00000309049.4|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chr16_-_28621298_28621311	0.230065	PAX4	ENST00000566189.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr22_-_31688381_31688418	0.227481	PAX4	ENST00000487265.2|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr19_-_10420459_10420556	0.227474	PAX4	ENST00000403352.1|ZGLP1|ENSG00000220201.3|zinc finger, GATA-like protein 1 	ENST00000403903.3|ZGLP1|ENSG00000220201.3|zinc finger, GATA-like protein 1
hg19_v2_chr11_+_61891445_61891535	0.225223	PAX4	ENST00000394818.3|INCENP|ENSG00000149503.8|inner centromere protein antigens 135/155kDa 	ENST00000533896.1|INCENP|ENSG00000149503.8|inner centromere protein antigens 135/155kDa 	ENST00000278849.4|INCENP|ENSG00000149503.8|inner centromere protein antigens 135/155kDa
hg19_v2_chr7_-_16872932_16873059	0.223991	PAX4	ENST00000419572.2|AGR2|ENSG00000106541.7|anterior gradient 2 	ENST00000412973.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chrX_-_47004878_47004906	0.22346	PAX4	ENST00000377811.3|NDUFB11|ENSG00000147123.10|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
hg19_v2_chr5_-_142782862_142782894	0.223131	PAX4	ENST00000415690.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chrX_+_47004639_47004685	0.221666	PAX4	ENST00000345781.6|RBM10|ENSG00000182872.11|RNA binding motif protein 10
hg19_v2_chr7_+_100482595_100482631	0.21454	PAX4	ENST00000448764.1|SRRT|ENSG00000087087.14|serrate RNA effector molecule homolog (Arabidopsis)
hg19_v2_chr19_+_14544099_14544305	0.214537	PAX4	ENST00000242783.6|PKN1|ENSG00000123143.8|protein kinase N1 	ENST00000586557.1|PKN1|ENSG00000123143.8|protein kinase N1 	ENST00000590097.1|PKN1|ENSG00000123143.8|protein kinase N1
hg19_v2_chr7_+_72848092_72848130	0.212068	PAX4	ENST00000344575.3|FZD9|ENSG00000188763.3|frizzled family receptor 9
hg19_v2_chr6_+_55039050_55039050	0.203461	PAX4	ENST00000370862.3|HCRTR2|ENSG00000137252.5|hypocretin (orexin) receptor 2
hg19_v2_chr7_-_96654133_96654409	0.201863	PAX4	ENST00000486603.2|DLX5|ENSG00000105880.4|distal-less homeobox 5 	ENST00000222598.4|DLX5|ENSG00000105880.4|distal-less homeobox 5
hg19_v2_chr5_-_142783175_142783297	0.2015	PAX4	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr6_+_10694900_10694930	0.196867	PAX4	ENST00000379568.3|PAK1IP1|ENSG00000111845.4|PAK1 interacting protein 1
hg19_v2_chr12_-_109221160_109221327	0.195174	PAX4	ENST00000326470.5|SSH1|ENSG00000084112.10|slingshot protein phosphatase 1
hg19_v2_chr11_+_72975578_72975584	0.194775	PAX4	ENST00000393592.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chrX_+_47004599_47004631	0.193578	PAX4	ENST00000329236.7|RBM10|ENSG00000182872.11|RNA binding motif protein 10
hg19_v2_chr11_+_72975559_72975565	0.193177	PAX4	ENST00000349767.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr11_+_72975524_72975557	0.191722	PAX4	ENST00000540342.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6 	ENST00000542092.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr3_-_142166904_142166916	0.190779	PAX4	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr10_+_6186847_6186921	0.188751	PAX4	ENST00000536985.1|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379789.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v2_chr5_-_58882219_58882337	0.18529	PAX4	ENST00000505453.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000360047.5|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr16_-_28621312_28621350	0.18347	PAX4	ENST00000314752.7|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr12_-_13248562_13248596	0.180936	PAX4	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr3_+_130569429_130569479	0.176153	PAX4	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr15_+_63340553_63340594	0.17415	PAX4	ENST00000334895.5|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha)
hg19_v2_chr17_+_1674982_1675041	0.173437	PAX4	ENST00000572048.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 	ENST00000573763.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
hg19_v2_chr7_+_116139424_116139444	0.172442	PAX4	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr13_+_28712614_28712703	0.171242	PAX4	ENST00000380958.3|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr5_+_147258266_147258280	0.166568	PAX4	ENST00000296694.4|SCGB3A2|ENSG00000164265.4|secretoglobin, family 3A, member 2
hg19_v2_chr5_+_146614579_146614671	0.164547	PAX4	ENST00000541094.1|STK32A|ENSG00000169302.10|serine/threonine kinase 32A 	ENST00000398521.3|STK32A|ENSG00000169302.10|serine/threonine kinase 32A
hg19_v2_chr10_+_33271469_33271479	0.164088	PAX4	ENST00000414157.1|RP11-462L8.1|ENSG00000229656.2|RP11-462L8.1
hg19_v2_chr12_-_13248705_13248710	0.159929	PAX4	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr19_-_51336443_51336443	0.159425	PAX4	ENST00000598673.1|KLK15|ENSG00000174562.9|kallikrein-related peptidase 15
hg19_v2_chr12_-_13248732_13248744	0.158514	PAX4	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr13_+_37247934_37248049	0.158327	PAX4	ENST00000315190.3|SERTM1|ENSG00000180440.3|serine-rich and transmembrane domain containing 1
hg19_v2_chr5_-_172662303_172662360	0.15759	PAX4	ENST00000517440.1|NKX2-5|ENSG00000183072.9|NK2 homeobox 5 	ENST00000329198.4|NKX2-5|ENSG00000183072.9|NK2 homeobox 5
hg19_v2_chr2_+_202937972_202937988	0.157443	PAX4	ENST00000541917.1|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012  	ENST00000295844.3|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012
hg19_v2_chr2_-_122042770_122042785	0.156962	PAX4	ENST00000263707.5|TFCP2L1|ENSG00000115112.7|transcription factor CP2-like 1
hg19_v2_chr4_-_113207048_113207076	0.156197	PAX4	ENST00000361717.3|TIFA|ENSG00000145365.10|TRAF-interacting protein with forkhead-associated domain
hg19_v2_chr8_+_145215928_145215928	0.153791	PAX4	ENST00000528919.1|MROH1|ENSG00000179832.13|maestro heat-like repeat family member 1
hg19_v2_chr8_+_143781513_143781568	0.153259	PAX4	ENST00000292430.6|LY6K|ENSG00000160886.9|lymphocyte antigen 6 complex, locus K 	ENST00000561179.1|LY6K|ENSG00000160886.9|lymphocyte antigen 6 complex, locus K 	ENST00000518841.1|LY6K|ENSG00000160886.9|lymphocyte antigen 6 complex, locus K 	ENST00000519387.1|LY6K|ENSG00000160886.9|lymphocyte antigen 6 complex, locus K
hg19_v2_chr2_+_185463093_185463181	0.152686	PAX4	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chrX_-_75005054_75005094	0.150485	PAX4	ENST00000373359.2|MAGEE2|ENSG00000186675.5|melanoma antigen family E, 2
hg19_v2_chr19_+_49622646_49622699	0.148148	PAX4	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr11_+_114168085_114168222	0.146419	PAX4	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr3_+_119298523_119298644	0.142554	PAX4	ENST00000357003.3|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr15_-_40401062_40401093	0.142185	PAX4	ENST00000354670.4|BMF|ENSG00000104081.9|Bcl2 modifying factor 	ENST00000559701.1|BMF|ENSG00000104081.9|Bcl2 modifying factor 	ENST00000557870.1|BMF|ENSG00000104081.9|Bcl2 modifying factor 	ENST00000558774.1|BMF|ENSG00000104081.9|Bcl2 modifying factor
hg19_v2_chr8_+_143781883_143781895	0.141739	PAX4	ENST00000522591.1|LY6K|ENSG00000160886.9|lymphocyte antigen 6 complex, locus K
hg19_v2_chr12_-_45269430_45269440	0.141676	PAX4	ENST00000395487.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr7_+_133812052_133812122	0.139828	PAX4	ENST00000285928.2|LRGUK|ENSG00000155530.2|leucine-rich repeats and guanylate kinase domain containing
hg19_v2_chr4_+_165675269_165675289	0.139727	PAX4	ENST00000507311.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr16_-_67224002_67224107	0.13489	PAX4	ENST00000563889.1|EXOC3L1|ENSG00000179044.11|exocyst complex component 3-like 1 	ENST00000564418.1|EXOC3L1|ENSG00000179044.11|exocyst complex component 3-like 1 	ENST00000545725.2|EXOC3L1|ENSG00000179044.11|exocyst complex component 3-like 1 	ENST00000314586.6|EXOC3L1|ENSG00000179044.11|exocyst complex component 3-like 1
hg19_v2_chr9_-_100000957_100001043	0.134294	PAX4	ENST00000366109.2|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5	ENST00000607322.1|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5
hg19_v2_chr19_-_6333614_6333640	0.130039	PAX4	ENST00000301452.4|ACER1|ENSG00000167769.4|alkaline ceramidase 1
hg19_v2_chr16_-_84273304_84273356	0.12707	PAX4	ENST00000308251.4|KCNG4|ENSG00000168418.6|potassium voltage-gated channel, subfamily G, member 4 	ENST00000568181.1|KCNG4|ENSG00000168418.6|potassium voltage-gated channel, subfamily G, member 4
hg19_v2_chr8_-_134309335_134309503	0.126036	PAX4	ENST00000522890.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000323851.7|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518176.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000354944.5|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000537882.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000522476.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518066.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000521544.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518480.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000523892.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1
hg19_v2_chr1_-_72748417_72748510	0.123692	PAX4	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr1_+_33439268_33439268	0.121679	PAX4	ENST00000594612.1|FKSG48|ENSG00000267885.1|FKSG48
hg19_v2_chr6_-_31697977_31698052	0.119583	PAX4	ENST00000375787.2|DDAH2|ENSG00000213722.4|dimethylarginine dimethylaminohydrolase 2
hg19_v2_chr11_-_65374430_65374497	0.118668	PAX4	ENST00000532507.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr19_-_35085490_35085490	0.117016	PAX4	ENST00000379204.2|SCGB2B2|ENSG00000205209.3|secretoglobin, family 2B, member 2
hg19_v2_chr17_+_16284104_16284245	0.115616	PAX4	ENST00000577958.1|UBB|ENSG00000170315.9|ubiquitin B 	ENST00000302182.3|UBB|ENSG00000170315.9|ubiquitin B 	ENST00000577640.1|UBB|ENSG00000170315.9|ubiquitin B
hg19_v2_chr18_-_3874271_3874337	0.115602	PAX4	ENST00000400149.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400155.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400150.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr19_-_49622348_49622407	0.114026	PAX4	ENST00000408991.2|C19orf73|ENSG00000221916.2|chromosome 19 open reading frame 73
hg19_v2_chr8_-_38853990_38854061	0.113243	PAX4	ENST00000456845.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000397070.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000517872.1|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000412303.1|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000456397.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2
hg19_v2_chr6_-_32083106_32083116	0.110364	PAX4	ENST00000442721.1|TNXB|ENSG00000168477.13|tenascin XB
hg19_v2_chr17_-_41116454_41116515	0.109985	PAX4	ENST00000427569.2|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1 	ENST00000430739.1|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1
hg19_v2_chr1_+_15802594_15802601	0.109743	PAX4	ENST00000375910.3|CELA2B|ENSG00000215704.5|chymotrypsin-like elastase family, member 2B
hg19_v2_chr17_-_17480779_17480814	0.107276	PAX4	ENST00000395782.1|PEMT|ENSG00000133027.13|phosphatidylethanolamine N-methyltransferase
hg19_v2_chr4_-_171011323_171011538	0.105787	PAX4	ENST00000509167.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000353187.2|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000507375.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000515480.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase
hg19_v2_chr1_-_109618566_109618636	0.105323	PAX4	ENST00000338366.5|TAF13|ENSG00000197780.5|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
hg19_v2_chr11_+_120107344_120107351	0.105294	PAX4	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chrX_-_102943022_102943086	0.104766	PAX4	ENST00000433176.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr12_-_121477039_121477054	0.104022	PAX4	ENST00000257570.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr19_-_52551814_52552023	0.103711	PAX4	ENST00000594154.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000598745.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000597273.1|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chrX_-_153523462_153523564	0.102992	PAX4	ENST00000361930.3|TEX28|ENSG00000185254.8|testis expressed 28 	ENST00000369926.1|TEX28|ENSG00000185254.8|testis expressed 28
hg19_v2_chr8_-_145653885_145653937	0.102533	PAX4	ENST00000531032.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000292510.4|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000377348.2|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000530790.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000533806.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr17_-_74049720_74049747	0.101878	PAX4	ENST00000602720.1|SRP68|ENSG00000167881.10|signal recognition particle 68kDa
hg19_v2_chr4_+_3465027_3465050	0.101048	PAX4	ENST00000389653.2|DOK7|ENSG00000175920.11|docking protein 7 	ENST00000507039.1|DOK7|ENSG00000175920.11|docking protein 7 	ENST00000340083.5|DOK7|ENSG00000175920.11|docking protein 7
hg19_v2_chr16_-_28608424_28608435	0.0992715	PAX4	ENST00000335715.4|SULT1A2|ENSG00000197165.6|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
hg19_v2_chr8_+_104892639_104892652	0.098863	PAX4	ENST00000436393.2|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr10_+_114135004_114135033	0.09794	PAX4	ENST00000393081.1|ACSL5|ENSG00000197142.6|acyl-CoA synthetase long-chain family member 5
hg19_v2_chr17_+_72270380_72270420	0.0977954	PAX4	ENST00000582036.1|DNAI2|ENSG00000171595.9|dynein, axonemal, intermediate chain 2 	ENST00000307504.5|DNAI2|ENSG00000171595.9|dynein, axonemal, intermediate chain 2
hg19_v2_chr11_-_62368696_62368759	0.0977532	PAX4	ENST00000527204.1|MTA2|ENSG00000149480.2|metastasis associated 1 family, member 2
hg19_v2_chr6_-_116989916_116989979	0.097692	PAX4	ENST00000368576.3|ZUFSP|ENSG00000153975.5|zinc finger with UFM1-specific peptidase domain 	ENST00000368573.1|ZUFSP|ENSG00000153975.5|zinc finger with UFM1-specific peptidase domain
hg19_v2_chr15_+_63340647_63340728	0.097652	PAX4	ENST00000404484.4|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha)
hg19_v2_chr4_-_140544386_140544413	0.0967368	PAX4	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr8_+_41347915_41348001	0.0965095	PAX4	ENST00000518270.1|GOLGA7|ENSG00000147533.12|golgin A7 	ENST00000520817.1|GOLGA7|ENSG00000147533.12|golgin A7
hg19_v2_chr5_+_167913450_167913496	0.0947343	PAX4	ENST00000231572.3|RARS|ENSG00000113643.4|arginyl-tRNA synthetase 	ENST00000538719.1|RARS|ENSG00000113643.4|arginyl-tRNA synthetase
hg19_v2_chr19_+_49891475_49891520	0.0946354	PAX4	ENST00000447857.3|CCDC155|ENSG00000161609.5|coiled-coil domain containing 155
hg19_v2_chr19_-_49955050_49955095	0.0946202	PAX4	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chrX_-_48827976_48827976	0.0940287	PAX4	ENST00000218176.3|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr17_+_16284399_16284416	0.0933284	PAX4	ENST00000535788.1|UBB|ENSG00000170315.9|ubiquitin B
hg19_v2_chr9_+_130565487_130565560	0.0900392	PAX4	ENST00000373225.3|FPGS|ENSG00000136877.10|folylpolyglutamate synthase 	ENST00000431857.1|FPGS|ENSG00000136877.10|folylpolyglutamate synthase
hg19_v2_chrM_+_5824_5904	0.0878364	PAX4	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr7_-_130080818_130080908	0.0865181	PAX4	ENST00000343969.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa 	ENST00000541543.1|CEP41|ENSG00000106477.14|centrosomal protein 41kDa 	ENST00000489512.1|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr11_-_124622134_124622162	0.083914	PAX4	ENST00000326621.5|VSIG2|ENSG00000019102.7|V-set and immunoglobulin domain containing 2
hg19_v2_chr5_-_32444828_32444872	0.0833466	PAX4	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr2_-_87088995_87089047	0.0829644	PAX4	ENST00000393759.2|CD8B|ENSG00000172116.17|CD8b molecule 	ENST00000349455.3|CD8B|ENSG00000172116.17|CD8b molecule 	ENST00000331469.2|CD8B|ENSG00000172116.17|CD8b molecule 	ENST00000431506.2|CD8B|ENSG00000172116.17|CD8b molecule 	ENST00000393761.2|CD8B|ENSG00000172116.17|CD8b molecule 	ENST00000390655.6|CD8B|ENSG00000172116.17|CD8b molecule
hg19_v2_chr12_-_113574028_113574051	0.0826979	PAX4	ENST00000546530.1|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like) 	ENST00000261729.5|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like)
hg19_v2_chr1_+_162039558_162039587	0.0822237	PAX4	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr18_-_3874247_3874262	0.0814356	PAX4	ENST00000581699.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr2_-_170550877_170550943	0.0813188	PAX4	ENST00000447353.1|CCDC173|ENSG00000154479.8|coiled-coil domain containing 173
hg19_v2_chr17_+_43299241_43299292	0.0809894	PAX4	ENST00000328118.3|FMNL1|ENSG00000184922.9|formin-like 1
hg19_v2_chrX_-_102942961_102943011	0.0805788	PAX4	ENST00000434230.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000418819.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000360458.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr3_+_35682913_35682982	0.0800139	PAX4	ENST00000449196.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr8_+_41348072_41348112	0.0793075	PAX4	ENST00000405786.2|GOLGA7|ENSG00000147533.12|golgin A7
hg19_v2_chr19_+_38779778_38779808	0.0784203	PAX4	ENST00000590738.1|SPINT2|ENSG00000167642.8|serine peptidase inhibitor, Kunitz type, 2 	ENST00000587519.2|CTB-102L5.4|ENSG00000267748.2|CTB-102L5.4	ENST00000591889.1|CTB-102L5.4|ENSG00000267748.2|CTB-102L5.4
hg19_v2_chr7_+_66386204_66386249	0.077363	PAX4	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr3_-_142166846_142166867	0.0769177	PAX4	ENST00000463916.1|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1 	ENST00000544157.1|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr2_-_217560248_217560278	0.0761213	PAX4	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr3_-_9921934_9921940	0.0760138	PAX4	ENST00000423850.1|CIDEC|ENSG00000187288.6|cell death-inducing DFFA-like effector c
hg19_v2_chr20_-_54580523_54580585	0.0757624	PAX4	ENST00000064571.2|CBLN4|ENSG00000054803.3|cerebellin 4 precursor
hg19_v2_chr12_+_110906169_110906247	0.0756723	PAX4	ENST00000377673.5|FAM216A|ENSG00000204856.7|family with sequence similarity 216, member A
hg19_v2_chr11_-_93276582_93276674	0.0737459	PAX4	ENST00000298966.2|SMCO4|ENSG00000166002.2|single-pass membrane protein with coiled-coil domains 4
hg19_v2_chr17_-_33390667_33390871	0.0721837	PAX4	ENST00000378516.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000268850.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000394597.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr14_+_78227105_78227317	0.0716512	PAX4	ENST00000439131.2|C14orf178|ENSG00000197734.4|chromosome 14 open reading frame 178 	ENST00000355883.3|C14orf178|ENSG00000197734.4|chromosome 14 open reading frame 178 	ENST00000557011.1|C14orf178|ENSG00000197734.4|chromosome 14 open reading frame 178 	ENST00000556047.1|C14orf178|ENSG00000197734.4|chromosome 14 open reading frame 178
hg19_v2_chr11_-_35440796_35440916	0.0704364	PAX4	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr1_-_151319283_151319314	0.070385	PAX4	ENST00000392746.3|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr4_-_176733897_176733906	0.0685969	PAX4	ENST00000393658.2|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chrX_+_7810303_7810303	0.068125	PAX4	ENST00000381059.3|VCX|ENSG00000182583.8|variable charge, X-linked 	ENST00000341408.4|VCX|ENSG00000182583.8|variable charge, X-linked
hg19_v2_chr19_-_37064145_37064216	0.0671751	PAX4	ENST00000591340.1|ZNF529|ENSG00000186020.8|zinc finger protein 529 	ENST00000334116.7|ZNF529|ENSG00000186020.8|zinc finger protein 529
hg19_v2_chr2_+_203879568_203879611	0.0667913	PAX4	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr22_-_31688431_31688520	0.0662867	PAX4	ENST00000402249.3|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000443175.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000215912.5|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000441972.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr9_+_19049372_19049460	0.0658525	PAX4	ENST00000380527.1|RRAGA|ENSG00000155876.4|Ras-related GTP binding A
hg19_v2_chr4_+_14113592_14113644	0.0616201	PAX4	ENST00000502759.1|LINC01085|ENSG00000248698.1|long intergenic non-protein coding RNA 1085 	ENST00000511200.1|LINC01085|ENSG00000248698.1|long intergenic non-protein coding RNA 1085 	ENST00000512754.1|LINC01085|ENSG00000248698.1|long intergenic non-protein coding RNA 1085 	ENST00000506739.1|LINC01085|ENSG00000248698.1|long intergenic non-protein coding RNA 1085
hg19_v2_chr19_-_6767431_6767479	0.0585512	PAX4	ENST00000437152.3|SH2D3A|ENSG00000125731.8|SH2 domain containing 3A 	ENST00000597687.1|SH2D3A|ENSG00000125731.8|SH2 domain containing 3A
hg19_v2_chr14_+_104394770_104394820	0.0581772	PAX4	ENST00000409874.4|TDRD9|ENSG00000156414.14|tudor domain containing 9 	ENST00000339063.5|TDRD9|ENSG00000156414.14|tudor domain containing 9
hg19_v2_chr17_+_72322346_72322382	0.0569609	PAX4	ENST00000551294.1|KIF19|ENSG00000196169.10|kinesin family member 19 	ENST00000389916.4|KIF19|ENSG00000196169.10|kinesin family member 19
hg19_v2_chr1_-_155145721_155145809	0.0559392	PAX4	ENST00000295682.4|KRTCAP2|ENSG00000163463.7|keratinocyte associated protein 2
hg19_v2_chr10_+_74653330_74653345	0.0558957	PAX4	ENST00000334011.5|OIT3|ENSG00000138315.8|oncoprotein induced transcript 3
hg19_v2_chr1_-_25291475_25291511	0.0556615	PAX4	ENST00000338888.3|RUNX3|ENSG00000020633.14|runt-related transcription factor 3 	ENST00000399916.1|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr18_-_60986613_60986662	0.0550829	PAX4	ENST00000444484.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_+_32407619_32407695	0.0532716	PAX4	ENST00000395388.2|HLA-DRA|ENSG00000204287.9|major histocompatibility complex, class II, DR alpha 	ENST00000374982.5|HLA-DRA|ENSG00000204287.9|major histocompatibility complex, class II, DR alpha
hg19_v2_chr11_-_58980342_58980431	0.0524289	PAX4	ENST00000361050.3|MPEG1|ENSG00000197629.5|macrophage expressed 1
hg19_v2_chr10_-_71332994_71332994	0.0500795	PAX4	ENST00000242462.4|NEUROG3|ENSG00000122859.4|neurogenin 3
hg19_v2_chr9_+_92219919_92219953	0.0487238	PAX4	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr1_-_240775447_240775462	0.0480758	PAX4	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr19_-_4457776_4457819	0.0476174	PAX4	ENST00000301281.6|UBXN6|ENSG00000167671.7|UBX domain protein 6
hg19_v2_chr8_-_7673238_7673238	0.0467066	PAX4	ENST00000335021.2|DEFB107A|ENSG00000186572.2|defensin, beta 107A
hg19_v2_chr1_+_26644441_26644455	0.0465505	PAX4	ENST00000374213.2|CD52|ENSG00000169442.4|CD52 molecule
hg19_v2_chr20_-_52210368_52210384	0.0464232	PAX4	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr3_+_46283916_46283927	0.0459935	PAX4	ENST00000395940.2|CCR3|ENSG00000183625.10|chemokine (C-C motif) receptor 3
hg19_v2_chr13_-_25496926_25497034	0.042793	PAX4	ENST00000545981.1|CENPJ|ENSG00000151849.10|centromere protein J 	ENST00000381884.4|CENPJ|ENSG00000151849.10|centromere protein J
hg19_v2_chr6_+_32605134_32605190	0.0423472	PAX4	ENST00000343139.5|HLA-DQA1|ENSG00000196735.7|major histocompatibility complex, class II, DQ alpha 1 	ENST00000395363.1|HLA-DQA1|ENSG00000196735.7|major histocompatibility complex, class II, DQ alpha 1 	ENST00000496318.1|HLA-DQA1|ENSG00000196735.7|major histocompatibility complex, class II, DQ alpha 1
hg19_v2_chr9_-_85882145_85882202	0.0418463	PAX4	ENST00000328788.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr11_-_62995986_62995986	0.0412958	PAX4	ENST00000403374.2|SLC22A25|ENSG00000196600.8|solute carrier family 22, member 25
hg19_v2_chr7_-_140098257_140098349	0.0412532	PAX4	ENST00000340308.3|SLC37A3|ENSG00000157800.13|solute carrier family 37, member 3 	ENST00000447932.2|SLC37A3|ENSG00000157800.13|solute carrier family 37, member 3 	ENST00000429996.2|SLC37A3|ENSG00000157800.13|solute carrier family 37, member 3 	ENST00000469193.1|SLC37A3|ENSG00000157800.13|solute carrier family 37, member 3 	ENST00000326232.9|SLC37A3|ENSG00000157800.13|solute carrier family 37, member 3
hg19_v2_chrX_-_107682702_107682722	0.0397691	PAX4	ENST00000372216.4|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr3_+_46283863_46283874	0.0385296	PAX4	ENST00000545097.1|CCR3|ENSG00000183625.10|chemokine (C-C motif) receptor 3 	ENST00000541018.1|CCR3|ENSG00000183625.10|chemokine (C-C motif) receptor 3
hg19_v2_chr4_+_47487285_47487366	0.0380588	PAX4	ENST00000273859.3|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D 	ENST00000504445.1|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D
hg19_v2_chr10_+_120116527_120116620	0.0362572	PAX4	ENST00000445161.1|LINC00867|ENSG00000232139.1|long intergenic non-protein coding RNA 867
hg19_v2_chr14_-_50559361_50559361	0.0359118	PAX4	ENST00000305273.1|C14orf183|ENSG00000168260.1|chromosome 14 open reading frame 183
hg19_v2_chrX_-_52533295_52533303	0.0358692	PAX4	ENST00000375578.1|XAGE1D|ENSG00000204376.7|X antigen family, member 1D 	ENST00000396497.3|XAGE1D|ENSG00000204376.7|X antigen family, member 1D
hg19_v2_chr16_+_69958887_69958927	0.0355605	PAX4	ENST00000568684.1|WWP2|ENSG00000198373.8|WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr19_-_54784937_54785039	0.0347543	PAX4	ENST00000434421.1|LILRB2|ENSG00000131042.9|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 	ENST00000314446.5|LILRB2|ENSG00000131042.9|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 	ENST00000391749.4|LILRB2|ENSG00000131042.9|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
hg19_v2_chr19_+_2977444_2977578	0.0346922	PAX4	ENST00000246112.4|TLE6|ENSG00000104953.14|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) 	ENST00000453329.1|TLE6|ENSG00000104953.14|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) 	ENST00000482627.1|TLE6|ENSG00000104953.14|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) 	ENST00000452088.1|TLE6|ENSG00000104953.14|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v2_chr11_+_46740730_46740859	0.0346855	PAX4	ENST00000311907.5|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000530231.1|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000442468.1|F2|ENSG00000180210.10|coagulation factor II (thrombin)
hg19_v2_chr10_-_70092671_70092806	0.0344643	PAX4	ENST00000358769.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000432941.1|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000495025.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chrX_+_65384182_65384231	0.0340902	PAX4	ENST00000441993.2|HEPH|ENSG00000089472.12|hephaestin 	ENST00000419594.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr21_-_21630994_21631133	0.0334339	PAX4	ENST00000436373.1|AP001171.1|ENSG00000233236.1|AP001171.1
hg19_v2_chr1_-_38156153_38156221	0.0333522	PAX4	ENST00000464085.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109 	ENST00000486637.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109 	ENST00000358011.4|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109 	ENST00000461359.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109
hg19_v2_chr11_+_1874200_1874340	0.0332463	PAX4	ENST00000311604.3|LSP1|ENSG00000130592.9|lymphocyte-specific protein 1
hg19_v2_chr14_-_78227476_78227533	0.0305389	PAX4	ENST00000554775.1|SNW1|ENSG00000100603.9|SNW domain containing 1 	ENST00000555761.1|SNW1|ENSG00000100603.9|SNW domain containing 1 	ENST00000554324.1|SNW1|ENSG00000100603.9|SNW domain containing 1 	ENST00000261531.7|SNW1|ENSG00000100603.9|SNW domain containing 1
hg19_v2_chr2_+_99758161_99758213	0.0301478	PAX4	ENST00000409684.1|C2ORF15|ENSG00000273045.1|Uncharacterized protein C2orf15
hg19_v2_chr11_+_134144139_134144139	0.0296094	PAX4	ENST00000389887.5|GLB1L3|ENSG00000166105.11|galactosidase, beta 1-like 3
hg19_v2_chrX_+_52238810_52238818	0.0290344	PAX4	ENST00000437949.2|XAGE1B|ENSG00000204382.7|X antigen family, member 1B 	ENST00000375616.1|XAGE1B|ENSG00000204382.7|X antigen family, member 1B
hg19_v2_chrX_+_65384052_65384112	0.0286771	PAX4	ENST00000336279.5|HEPH|ENSG00000089472.12|hephaestin 	ENST00000458621.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr4_+_492985_493078	0.0285425	PAX4	ENST00000296306.7|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000536264.1|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000310340.5|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000453061.2|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000504346.1|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000503111.1|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000383028.4|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G 	ENST00000509768.1|PIGG|ENSG00000174227.11|phosphatidylinositol glycan anchor biosynthesis, class G
hg19_v2_chr12_-_99288536_99288677	0.0267744	PAX4	ENST00000549797.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000333732.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000341752.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr16_-_3074231_3074313	0.0261556	PAX4	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr1_-_8877692_8877732	0.0254004	PAX4	ENST00000400908.2|RERE|ENSG00000142599.13|arginine-glutamic acid dipeptide (RE) repeats
hg19_v2_chr21_-_33651324_33651380	0.0237226	PAX4	ENST00000290130.3|MIS18A|ENSG00000159055.3|MIS18 kinetochore protein A
hg19_v2_chrX_+_52511761_52511769	0.0227987	PAX4	ENST00000399795.3|XAGE1C|ENSG00000183461.12|X antigen family, member 1C 	ENST00000375589.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr9_+_100000717_100000779	0.0225546	PAX4	ENST00000375205.2|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180 	ENST00000357054.1|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180 	ENST00000395220.1|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180 	ENST00000375202.2|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180 	ENST00000411667.2|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180
hg19_v2_chr19_+_9361606_9361606	0.0224834	PAX4	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr12_+_116997186_116997186	0.0222929	PAX4	ENST00000306985.4|MAP1LC3B2|ENSG00000171471.5|microtubule-associated protein 1 light chain 3 beta 2
hg19_v2_chr8_-_74205851_74205874	0.0221305	PAX4	ENST00000396467.1|RPL7|ENSG00000147604.9|ribosomal protein L7
hg19_v2_chrX_-_131623982_131624011	0.0216571	PAX4	ENST00000370844.1|MBNL3|ENSG00000076770.10|muscleblind-like splicing regulator 3
hg19_v2_chr14_+_76618242_76618305	0.0211894	PAX4	ENST00000557542.1|GPATCH2L|ENSG00000089916.13|G patch domain containing 2-like 	ENST00000557263.1|GPATCH2L|ENSG00000089916.13|G patch domain containing 2-like 	ENST00000557207.1|GPATCH2L|ENSG00000089916.13|G patch domain containing 2-like 	ENST00000312858.5|GPATCH2L|ENSG00000089916.13|G patch domain containing 2-like 	ENST00000261530.7|GPATCH2L|ENSG00000089916.13|G patch domain containing 2-like
hg19_v2_chr1_-_153585539_153585559	0.0201319	PAX4	ENST00000368706.4|S100A16|ENSG00000188643.6|S100 calcium binding protein A16
hg19_v2_chr15_+_80445232_80445254	0.019991	PAX4	ENST00000561421.1|FAH|ENSG00000103876.7|fumarylacetoacetate hydrolase (fumarylacetoacetase)
hg19_v2_chrX_-_52546189_52546197	0.0190153	PAX4	ENST00000375570.1|XAGE1E|ENSG00000204375.5|X antigen family, member 1E 	ENST00000429372.2|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr8_+_21946681_21946720	0.0190068	PAX4	ENST00000289921.7|FAM160B2|ENSG00000158863.17|family with sequence similarity 160, member B2
hg19_v2_chr7_-_23510086_23510118	0.018398	PAX4	ENST00000258729.3|IGF2BP3|ENSG00000136231.9|insulin-like growth factor 2 mRNA binding protein 3
hg19_v2_chrX_-_52260355_52260363	0.0181568	PAX4	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr2_+_190526111_190526248	0.0171177	PAX4	ENST00000607062.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000260952.4|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000425590.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000607535.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000420250.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000606910.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000607690.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1 	ENST00000607829.1|ASNSD1|ENSG00000138381.5|asparagine synthetase domain containing 1
hg19_v2_chr19_+_13134772_13134846	0.0170336	PAX4	ENST00000587760.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000585575.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr12_-_110888103_110888212	0.0126062	PAX4	ENST00000426440.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa 	ENST00000228825.7|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr2_-_10830093_10830109	0.0123948	PAX4	ENST00000381685.5|NOL10|ENSG00000115761.11|nucleolar protein 10 	ENST00000345985.3|NOL10|ENSG00000115761.11|nucleolar protein 10 	ENST00000542668.1|NOL10|ENSG00000115761.11|nucleolar protein 10 	ENST00000538384.1|NOL10|ENSG00000115761.11|nucleolar protein 10
hg19_v2_chr7_+_69064300_69064342	0.011735	PAX4	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr5_-_126409159_126409200	0.0113467	PAX4	ENST00000607731.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000535381.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000296662.5|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000509733.3|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63
hg19_v2_chr5_-_43515231_43515274	0.0105172	PAX4	ENST00000306862.2|C5orf34|ENSG00000172244.4|chromosome 5 open reading frame 34
hg19_v2_chr13_-_47471155_47471214	0.0103504	PAX4	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr12_-_51611477_51611612	0.010297	PAX4	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr12_+_31812121_31812166	0.00899974	PAX4	ENST00000395763.3|METTL20|ENSG00000139160.9|methyltransferase like 20
hg19_v2_chr12_-_2986107_2986258	0.0089344	PAX4	ENST00000359843.3|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000342628.2|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000361953.3|FOXM1|ENSG00000111206.8|forkhead box M1
hg19_v2_chr19_+_11708229_11708240	0.00877342	PAX4	ENST00000361113.5|ZNF627|ENSG00000198551.5|zinc finger protein 627
hg19_v2_chr11_-_62474803_62474875	0.00853258	PAX4	ENST00000533982.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000360796.5|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr12_-_18243075_18243091	0.00712269	PAX4	ENST00000536890.1|RERGL|ENSG00000111404.2|RERG/RAS-like
hg19_v2_chr19_-_51308175_51308193	0.00711854	PAX4	ENST00000345523.4|C19orf48|ENSG00000167747.9|chromosome 19 open reading frame 48
hg19_v2_chr18_-_60987220_60987386	0.00706303	PAX4	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_-_49755019_49755053	0.00658642	PAX4	ENST00000304801.3|PGK2|ENSG00000170950.3|phosphoglycerate kinase 2
hg19_v2_chr4_+_109571800_109571811	0.00639009	PAX4	ENST00000512478.2|OSTC|ENSG00000198856.8|oligosaccharyltransferase complex subunit (non-catalytic)
hg19_v2_chrX_+_106163626_106163638	0.00604352	PAX4	ENST00000336803.1|CLDN2|ENSG00000165376.6|claudin 2
hg19_v2_chr12_+_56546223_56546361	0.00496734	PAX4	ENST00000550443.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000207437.5|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr15_+_80445113_80445170	0.00419572	PAX4	ENST00000407106.1|FAH|ENSG00000103876.7|fumarylacetoacetate hydrolase (fumarylacetoacetase) 	ENST00000261755.5|FAH|ENSG00000103876.7|fumarylacetoacetate hydrolase (fumarylacetoacetase)
hg19_v2_chr5_-_130500922_130501178	0.00392473	PAX4	ENST00000513012.1|HINT1|ENSG00000169567.7|histidine triad nucleotide binding protein 1 	ENST00000508488.1|HINT1|ENSG00000169567.7|histidine triad nucleotide binding protein 1 	ENST00000506908.1|HINT1|ENSG00000169567.7|histidine triad nucleotide binding protein 1 	ENST00000304043.5|HINT1|ENSG00000169567.7|histidine triad nucleotide binding protein 1
hg19_v2_chr1_-_153348067_153348125	0.00377249	PAX4	ENST00000368737.3|S100A12|ENSG00000163221.7|S100 calcium binding protein A12
hg19_v2_chr12_-_121476959_121477003	0.00356159	PAX4	ENST00000339275.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr11_+_118443098_118443168	0.00334798	PAX4	ENST00000392859.3|ARCN1|ENSG00000095139.9|archain 1 	ENST00000359415.4|ARCN1|ENSG00000095139.9|archain 1 	ENST00000534182.2|ARCN1|ENSG00000095139.9|archain 1 	ENST00000264028.4|ARCN1|ENSG00000095139.9|archain 1
hg19_v2_chr6_+_133135580_133135711	0.00261507	PAX4	ENST00000230050.3|RPS12|ENSG00000112306.7|ribosomal protein S12
hg19_v2_chr13_+_76334498_76334507	0.00252106	PAX4	ENST00000534657.1|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr1_-_182360918_182360933	0.0015177	PAX4	ENST00000339526.4|GLUL|ENSG00000135821.12|glutamate-ammonia ligase
hg19_v2_chr15_-_60690932_60690947	0.000837204	PAX4	ENST00000559818.1|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr8_-_21771214_21771371	0.000560642	PAX4	ENST00000276420.4|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr19_+_55105085_55105136	0.000514515	PAX4	ENST00000251372.3|LILRA1|ENSG00000104974.6|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1 	ENST00000453777.1|LILRA1|ENSG00000104974.6|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1
hg19_v2_chrX_-_131623874_131623894	0.000433158	PAX4	ENST00000436215.1|MBNL3|ENSG00000076770.10|muscleblind-like splicing regulator 3
