hg19_v2_chr4_+_126237554_126237554	1.77147	PITX2	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr19_+_2476116_2476146	0.963413	PITX2	ENST00000215631.4|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta 	ENST00000587345.1|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta
hg19_v2_chr15_+_41221536_41221591	0.500795	PITX2	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr12_+_6949964_6950138	0.421124	PITX2	ENST00000541978.1|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3 	ENST00000435982.2|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3
hg19_v2_chr6_-_111804905_111804921	0.379387	PITX2	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr19_-_49843539_49843599	0.372522	PITX2	ENST00000602554.1|CTC-301O7.4|ENSG00000197813.4|CTC-301O7.4	ENST00000358234.4|CTC-301O7.4|ENSG00000197813.4|CTC-301O7.4
hg19_v2_chrX_+_107069063_107069123	0.347446	PITX2	ENST00000262843.6|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr17_+_4643337_4643345	0.335715	PITX2	ENST00000592813.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr14_+_75988768_75988826	0.316869	PITX2	ENST00000286639.6|BATF|ENSG00000156127.6|basic leucine zipper transcription factor, ATF-like
hg19_v2_chr6_+_130339710_130339745	0.304159	PITX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr17_+_4643300_4643329	0.289043	PITX2	ENST00000433935.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr6_+_35310312_35310359	0.254218	PITX2	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr2_+_120770581_120770608	0.220693	PITX2	ENST00000263713.5|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr8_-_27462822_27462856	0.195305	PITX2	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr10_-_49482907_49482941	0.180988	PITX2	ENST00000374201.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2 	ENST00000407470.4|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr3_+_158787041_158787074	0.172239	PITX2	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr12_-_90049878_90049890	0.17196	PITX2	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr11_-_119217365_119217398	0.170077	PITX2	ENST00000360167.4|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000445041.2|C1QTNF5|ENSG00000223953.3|C1q and tumor necrosis factor related protein 5 	ENST00000555262.1|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000449574.2|MFRP|ENSG00000235718.3|membrane frizzled-related protein
hg19_v2_chr12_-_90049828_90049847	0.162471	PITX2	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr1_+_201979645_201979721	0.158831	PITX2	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr7_+_73868439_73868450	0.144184	PITX2	ENST00000424337.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr6_+_35310391_35310410	0.140429	PITX2	ENST00000337400.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000311565.4|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000540939.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr14_+_75988851_75988903	0.132597	PITX2	ENST00000555504.1|BATF|ENSG00000156127.6|basic leucine zipper transcription factor, ATF-like
hg19_v2_chr7_+_73868220_73868300	0.12726	PITX2	ENST00000455841.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr3_-_50388522_50388522	0.125311	PITX2	ENST00000232501.3|NPRL2|ENSG00000114388.8|nitrogen permease regulator-like 2 (S. cerevisiae)
hg19_v2_chr9_-_95166841_95166867	0.117023	PITX2	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr6_+_46661575_46661709	0.112625	PITX2	ENST00000450697.1|TDRD6|ENSG00000180113.11|tudor domain containing 6
hg19_v2_chr18_-_47017956_47018210	0.108644	PITX2	ENST00000584895.1|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000332968.6|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000580210.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579408.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr22_-_30234218_30234276	0.101366	PITX2	ENST00000307790.3|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2 	ENST00000542393.1|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2 	ENST00000397771.2|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2
hg19_v2_chr12_-_53189892_53189905	0.0994727	PITX2	ENST00000309505.3|KRT3|ENSG00000186442.6|keratin 3 	ENST00000417996.2|KRT3|ENSG00000186442.6|keratin 3
hg19_v2_chr2_+_120770645_120770669	0.0990904	PITX2	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr16_-_5116025_5116111	0.0976346	PITX2	ENST00000472572.3|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000315997.5|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000422873.1|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000350219.4|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89
hg19_v2_chr9_-_110251836_110251927	0.0887983	PITX2	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr10_+_103986085_103986085	0.0789741	PITX2	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chrX_+_15767971_15768093	0.0722524	PITX2	ENST00000479740.1|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial 	ENST00000454127.2|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial
hg19_v2_chr22_-_39096661_39096681	0.0696908	PITX2	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chrM_+_9207_9255	0.0682708	PITX2	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr8_-_133123406_133123406	0.064011	PITX2	ENST00000434736.2|HHLA1|ENSG00000132297.7|HERV-H LTR-associating 1
hg19_v2_chr13_-_36429763_36429779	0.063498	PITX2	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr11_+_61522844_61522875	0.0481175	PITX2	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr5_+_64920543_64920592	0.0432549	PITX2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr7_-_122840015_122840040	0.0357813	PITX2	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr17_-_46657473_46657473	0.0307709	PITX2	ENST00000332503.5|HOXB4|ENSG00000182742.5|homeobox B4
hg19_v2_chr16_-_68014732_68014732	0.0252824	PITX2	ENST00000268793.4|DPEP3|ENSG00000141096.4|dipeptidase 3
hg19_v2_chr16_+_28722684_28722807	0.0242327	PITX2	ENST00000331666.6|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000395587.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000569690.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000564243.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C
hg19_v2_chr11_-_5248294_5248308	0.0227855	PITX2	ENST00000335295.4|HBB|ENSG00000244734.2|hemoglobin, beta
hg19_v2_chrX_-_6146876_6146924	0.0225962	PITX2	ENST00000381095.3|NLGN4X|ENSG00000146938.10|neuroligin 4, X-linked
hg19_v2_chr3_+_119421849_119421962	0.022497	PITX2	ENST00000273390.5|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1 	ENST00000463700.1|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1
hg19_v2_chr2_+_3622893_3622925	0.0215225	PITX2	ENST00000407445.3|RPS7|ENSG00000171863.8|ribosomal protein S7 	ENST00000403564.1|RPS7|ENSG00000171863.8|ribosomal protein S7
hg19_v2_chr7_-_128415844_128415849	0.0102502	PITX2	ENST00000249389.2|OPN1SW|ENSG00000128617.2|opsin 1 (cone pigments), short-wave-sensitive
hg19_v2_chr13_-_95131923_95131944	0.0100108	PITX2	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr11_-_96076334_96076419	0.00952257	PITX2	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chrX_-_54384425_54384495	0.00554554	PITX2	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr19_+_48325097_48325211	0.0042979	PITX2	ENST00000221996.7|CRX|ENSG00000105392.11|cone-rod homeobox 	ENST00000539067.1|CRX|ENSG00000105392.11|cone-rod homeobox
