hg19_v2_chr10_+_102106829_102106881	2.24673	SOX9	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chr7_+_77167343_77167369	2.14098	SOX9	ENST00000433369.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12 	ENST00000415482.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr4_+_41614720_41614734	1.99031	SOX9	ENST00000509277.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr7_-_11871815_11871831	1.96212	SOX9	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr17_-_42276574_42276742	1.90265	SOX9	ENST00000589805.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr4_+_41614909_41614926	1.89448	SOX9	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr14_-_51027838_51027851	1.8604	SOX9	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr3_-_149051194_149051269	1.85355	SOX9	ENST00000470080.1|TM4SF18|ENSG00000163762.2|transmembrane 4 L six family member 18
hg19_v2_chr7_+_155090271_155090382	1.66071	SOX9	ENST00000476756.1|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr17_-_14683517_14683523	1.60101	SOX9	ENST00000379640.1|AC005863.1|ENSG00000205325.1|AC005863.1
hg19_v2_chr1_-_85930246_85930289	1.52728	SOX9	ENST00000426972.3|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr3_-_149051444_149051548	1.35694	SOX9	ENST00000296059.2|TM4SF18|ENSG00000163762.2|transmembrane 4 L six family member 18
hg19_v2_chr6_-_75915757_75915775	1.33163	SOX9	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr5_-_43313574_43313614	1.32182	SOX9	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chrX_-_117107542_117107677	1.21031	SOX9	ENST00000371878.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr12_-_6233828_6233843	1.16052	SOX9	ENST00000572068.1|VWF|ENSG00000110799.9|von Willebrand factor 	ENST00000261405.5|VWF|ENSG00000110799.9|von Willebrand factor
hg19_v2_chr14_+_53019993_53020137	1.1313	SOX9	ENST00000542169.2|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C 	ENST00000555622.1|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr19_+_10765699_10765728	1.12845	SOX9	ENST00000590009.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr1_+_164528866_164528877	1.11921	SOX9	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr11_-_10830463_10830494	1.07505	SOX9	ENST00000527419.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530211.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530702.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000524932.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000532570.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr4_-_186732048_186732225	1.03153	SOX9	ENST00000448662.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000439049.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000420158.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000431808.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319471.9|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr5_+_74633036_74633085	0.996676	SOX9	ENST00000343975.5|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chrX_+_84499081_84499115	0.951829	SOX9	ENST00000276123.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr12_-_25055177_25055258	0.950898	SOX9	ENST00000538118.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr12_-_88974236_88974256	0.940539	SOX9	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chrX_-_45060135_45060149	0.933077	SOX9	ENST00000398000.2|CXorf36|ENSG00000147113.12|chromosome X open reading frame 36 	ENST00000377934.4|CXorf36|ENSG00000147113.12|chromosome X open reading frame 36
hg19_v2_chr8_-_80993010_80993073	0.928253	SOX9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr20_-_39317868_39317884	0.927758	SOX9	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr8_+_70378852_70378866	0.912699	SOX9	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr1_+_185703513_185703683	0.900721	SOX9	ENST00000271588.4|HMCN1|ENSG00000143341.7|hemicentin 1 	ENST00000367492.2|HMCN1|ENSG00000143341.7|hemicentin 1
hg19_v2_chr5_+_74632993_74633028	0.887498	SOX9	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr14_-_38725573_38725605	0.849264	SOX9	ENST00000342213.2|CLEC14A|ENSG00000176435.6|C-type lectin domain family 14, member A
hg19_v2_chr14_+_63671105_63671126	0.845731	SOX9	ENST00000316754.3|RHOJ|ENSG00000126785.8|ras homolog family member J
hg19_v2_chr1_+_29241027_29241095	0.801646	SOX9	ENST00000373797.1|EPB41|ENSG00000159023.14|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg19_v2_chr14_-_65569057_65569119	0.800978	SOX9	ENST00000555419.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000341653.2|MAX|ENSG00000125952.14|MYC associated factor X
hg19_v2_chr6_+_37787704_37787718	0.793226	SOX9	ENST00000474522.1|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr11_+_63953691_63953713	0.787154	SOX9	ENST00000543847.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr9_-_139658965_139658975	0.785286	SOX9	ENST00000316144.5|LCN15|ENSG00000177984.6|lipocalin 15
hg19_v2_chr11_+_128563948_128564003	0.745371	SOX9	ENST00000534087.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr2_-_70475701_70475717	0.714101	SOX9	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr21_+_26934165_26934221	0.713655	SOX9	ENST00000456917.1|MIR155HG|ENSG00000234883.2|MIR155 host gene (non-protein coding)
hg19_v2_chr1_-_182360498_182360541	0.706113	SOX9	ENST00000417584.2|GLUL|ENSG00000135821.12|glutamate-ammonia ligase
hg19_v2_chr17_+_26646175_26646295	0.705567	SOX9	ENST00000583381.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582113.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582384.1|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr8_-_38326119_38326134	0.702453	SOX9	ENST00000356207.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000326324.6|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr3_-_112329110_112329127	0.700033	SOX9	ENST00000479368.1|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chrX_+_41193407_41193422	0.698626	SOX9	ENST00000457138.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 	ENST00000441189.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr7_+_16793160_16793160	0.692429	SOX9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chrX_+_48380205_48380257	0.682582	SOX9	ENST00000446158.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase) 	ENST00000414061.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase)
hg19_v2_chr1_-_173991434_173991556	0.681305	SOX9	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr14_-_88459182_88459236	0.67841	SOX9	ENST00000544807.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr4_+_78079450_78079563	0.672278	SOX9	ENST00000395640.1|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000512918.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr4_-_110723194_110723207	0.662859	SOX9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr14_+_32546145_32546239	0.653403	SOX9	ENST00000556611.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000539826.2|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr19_+_16187816_16187838	0.649154	SOX9	ENST00000588410.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr9_-_123476612_123476698	0.647446	SOX9	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr15_-_59041768_59041950	0.645936	SOX9	ENST00000402627.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000396140.2|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000559053.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000561288.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr1_-_68698197_68698214	0.640483	SOX9	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr8_-_82395461_82395498	0.63484	SOX9	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr9_-_123476719_123476810	0.634728	SOX9	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr2_+_111880242_111880289	0.631757	SOX9	ENST00000393252.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr4_+_78079570_78079586	0.631253	SOX9	ENST00000509972.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr2_-_208031542_208031595	0.620855	SOX9	ENST00000423015.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr3_-_65583561_65583610	0.620228	SOX9	ENST00000460329.2|MAGI1|ENSG00000151276.19|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v2_chr7_+_128379449_128379463	0.617973	SOX9	ENST00000479257.1|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr2_-_70475730_70475798	0.615364	SOX9	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr20_-_17662705_17662874	0.61157	SOX9	ENST00000455029.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr7_-_75368248_75368265	0.611515	SOX9	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr6_-_11232891_11232915	0.609751	SOX9	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr18_-_53177984_53178004	0.609063	SOX9	ENST00000543082.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr18_+_6729698_6729724	0.602825	SOX9	ENST00000383472.4|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr6_+_89790459_89790479	0.595142	SOX9	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr8_+_11660227_11660306	0.58874	SOX9	ENST00000443614.2|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525900.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chrX_+_84498989_84499003	0.586763	SOX9	ENST00000395402.1|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr4_+_54243917_54244006	0.586502	SOX9	ENST00000507166.1|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1
hg19_v2_chr8_-_38325219_38325418	0.571894	SOX9	ENST00000533668.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000413133.2|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397108.4|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000526742.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000525001.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000425967.3|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000529552.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397113.2|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr17_-_76713100_76713122	0.569293	SOX9	ENST00000585509.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr18_+_42260861_42260882	0.566791	SOX9	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr7_+_77167376_77167395	0.56259	SOX9	ENST00000435495.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chrX_+_84499038_84499078	0.557161	SOX9	ENST00000373165.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr12_+_110011571_110011644	0.554307	SOX9	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr5_-_131826457_131826514	0.546806	SOX9	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr3_+_25469802_25469866	0.545052	SOX9	ENST00000330688.4|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr4_-_110723335_110723356	0.542781	SOX9	ENST00000394634.2|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr5_+_140797296_140797427	0.523384	SOX9	ENST00000398594.2|PCDHGB7|ENSG00000254122.1|protocadherin gamma subfamily B, 7
hg19_v2_chr2_+_54683419_54683442	0.519594	SOX9	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr5_-_39425222_39425283	0.516721	SOX9	ENST00000320816.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr4_-_110723134_110723181	0.508129	SOX9	ENST00000510800.1|CFI|ENSG00000205403.8|complement factor I 	ENST00000512148.1|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr17_-_39728303_39728318	0.506047	SOX9	ENST00000588431.1|KRT9|ENSG00000171403.5|keratin 9 	ENST00000246662.4|KRT9|ENSG00000171403.5|keratin 9
hg19_v2_chrX_+_41192595_41192651	0.505011	SOX9	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr12_-_110011288_110011347	0.500996	SOX9	ENST00000540016.1|MMAB|ENSG00000139428.7|methylmalonic aciduria (cobalamin deficiency) cblB type 	ENST00000266839.5|MMAB|ENSG00000139428.7|methylmalonic aciduria (cobalamin deficiency) cblB type
hg19_v2_chr11_+_128563652_128563689	0.495014	SOX9	ENST00000527786.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr5_+_140602904_140603078	0.485363	SOX9	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr19_+_8455200_8455301	0.483687	SOX9	ENST00000601897.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family 	ENST00000594216.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr7_-_22233442_22233527	0.481116	SOX9	ENST00000401957.2|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr20_-_17662878_17662940	0.481075	SOX9	ENST00000377813.1|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000377807.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000360807.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000398782.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr14_-_53019211_53019269	0.474512	SOX9	ENST00000557374.1|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16 	ENST00000281741.4|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16
hg19_v2_chr2_-_70475586_70475646	0.474075	SOX9	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr2_+_217498105_217498129	0.472104	SOX9	ENST00000233809.4|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chrX_-_2418596_2418621	0.470284	SOX9	ENST00000381218.3|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1
hg19_v2_chr2_+_109271481_109271509	0.46688	SOX9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr8_+_11660120_11660221	0.464748	SOX9	ENST00000220584.4|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr2_+_208576259_208576278	0.463537	SOX9	ENST00000392209.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr2_-_175629135_175629148	0.4614	SOX9	ENST00000409542.1|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle) 	ENST00000409219.1|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle)
hg19_v2_chr5_-_39425068_39425098	0.45986	SOX9	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr9_-_74979420_74979580	0.455918	SOX9	ENST00000343431.2|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376956.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr9_+_116263639_116263707	0.455313	SOX9	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chrX_+_135579238_135579416	0.447274	SOX9	ENST00000535601.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000448450.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000425695.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr11_-_126138808_126138877	0.44724	SOX9	ENST00000332118.6|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein) 	ENST00000532259.1|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein)
hg19_v2_chr3_+_44690211_44690267	0.443131	SOX9	ENST00000396056.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000432115.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000415571.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000399560.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000296092.3|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000542250.1|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000453164.1|ZNF35|ENSG00000169981.6|zinc finger protein 35
hg19_v2_chr1_+_66458072_66458109	0.442293	SOX9	ENST00000423207.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr5_-_39425290_39425336	0.442241	SOX9	ENST00000545653.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr11_-_77531752_77531792	0.442209	SOX9	ENST00000440064.2|RSF1|ENSG00000048649.9|remodeling and spacing factor 1 	ENST00000528095.1|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr15_-_52944231_52944268	0.441972	SOX9	ENST00000546305.2|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr3_+_25469724_25469773	0.438471	SOX9	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr6_+_89790490_89790506	0.436278	SOX9	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr1_-_93645818_93645918	0.430399	SOX9	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr14_-_88459503_88459615	0.430036	SOX9	ENST00000393568.4|GALC|ENSG00000054983.12|galactosylceramidase 	ENST00000261304.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr1_+_12834984_12834984	0.428671	SOX9	ENST00000357726.4|PRAMEF12|ENSG00000116726.4|PRAME family member 12
hg19_v2_chr9_+_116263778_116263793	0.428119	SOX9	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr15_-_50411412_50411437	0.421037	SOX9	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr4_+_71570430_71570536	0.420272	SOX9	ENST00000417478.2|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr1_+_8378140_8378187	0.413435	SOX9	ENST00000377479.2|SLC45A1|ENSG00000162426.10|solute carrier family 45, member 1
hg19_v2_chr19_-_10491130_10491220	0.406388	SOX9	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr12_-_71003568_71003629	0.406131	SOX9	ENST00000547715.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000451516.2|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000538708.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000550857.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000261266.5|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chr3_-_88108212_88108223	0.405763	SOX9	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr5_-_141338627_141338627	0.402776	SOX9	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr5_+_138677515_138677581	0.397747	SOX9	ENST00000265192.4|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000511706.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr12_-_31479107_31479142	0.396979	SOX9	ENST00000542983.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr7_+_116312411_116312502	0.396148	SOX9	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr22_-_19512893_19512946	0.390695	SOX9	ENST00000403084.1|CLDN5|ENSG00000184113.8|claudin 5 	ENST00000413119.2|CLDN5|ENSG00000184113.8|claudin 5
hg19_v2_chr19_+_48972459_48972490	0.389167	SOX9	ENST00000427476.1|CYTH2|ENSG00000105443.9|cytohesin 2
hg19_v2_chr16_+_2083265_2083303	0.380555	SOX9	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr8_-_38326139_38326161	0.380028	SOX9	ENST00000335922.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000532791.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397091.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr19_+_8455077_8455083	0.378546	SOX9	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr4_-_175204765_175204843	0.378044	SOX9	ENST00000513696.1|FBXO8|ENSG00000164117.8|F-box protein 8 	ENST00000503293.1|FBXO8|ENSG00000164117.8|F-box protein 8
hg19_v2_chr10_+_6244829_6244904	0.375656	SOX9	ENST00000317350.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379785.1|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379782.3|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000360521.2|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379775.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v2_chr15_+_84115868_84115980	0.37565	SOX9	ENST00000427482.2|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3
hg19_v2_chr15_+_85923797_85923844	0.37012	SOX9	ENST00000559362.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr11_-_10829851_10829860	0.368811	SOX9	ENST00000532082.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr1_+_24286287_24286326	0.367018	SOX9	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr1_+_156119466_156119514	0.366696	SOX9	ENST00000414683.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr16_+_3068393_3068446	0.364813	SOX9	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr7_+_134464376_134464413	0.360175	SOX9	ENST00000454108.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000361675.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr16_+_3704822_3704836	0.354874	SOX9	ENST00000414110.2|DNASE1|ENSG00000213918.6|deoxyribonuclease I
hg19_v2_chr10_-_81205373_81205429	0.350923	SOX9	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr5_+_140739537_140739703	0.350123	SOX9	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chr1_-_153643442_153643524	0.347826	SOX9	ENST00000368681.1|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2 	ENST00000361891.4|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2
hg19_v2_chr11_+_63953587_63953685	0.342233	SOX9	ENST00000305218.4|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1 	ENST00000538945.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr7_+_128379346_128379447	0.341253	SOX9	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr10_+_97803151_97803348	0.341004	SOX9	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr5_+_140729649_140729828	0.338426	SOX9	ENST00000523390.1|PCDHGB1|ENSG00000254221.1|protocadherin gamma subfamily B, 1
hg19_v2_chr4_+_113152978_113152989	0.337433	SOX9	ENST00000309703.6|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr4_-_2264015_2264041	0.333501	SOX9	ENST00000337190.2|MXD4|ENSG00000123933.10|MAX dimerization protein 4
hg19_v2_chr4_+_154125565_154125626	0.333321	SOX9	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr4_+_54243798_54243854	0.328954	SOX9	ENST00000337488.6|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1 	ENST00000358575.5|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1 	ENST00000507922.1|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1
hg19_v2_chr14_-_71276211_71276255	0.328623	SOX9	ENST00000381250.4|MAP3K9|ENSG00000006432.11|mitogen-activated protein kinase kinase kinase 9 	ENST00000555993.2|MAP3K9|ENSG00000006432.11|mitogen-activated protein kinase kinase kinase 9
hg19_v2_chr7_+_128349106_128349128	0.32809	SOX9	ENST00000485070.1|FAM71F1|ENSG00000135248.11|family with sequence similarity 71, member F1
hg19_v2_chr2_+_54198210_54198293	0.327168	SOX9	ENST00000607452.1|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type 	ENST00000422521.2|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type
hg19_v2_chr4_+_78078304_78078406	0.326725	SOX9	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr1_+_33722080_33722174	0.322159	SOX9	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chr9_-_99064386_99064410	0.318785	SOX9	ENST00000375262.2|HSD17B3|ENSG00000130948.5|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v2_chr1_-_21503337_21503407	0.31796	SOX9	ENST00000400422.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000602326.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000411888.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000438975.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr16_-_25026641_25026698	0.317179	SOX9	ENST00000289968.6|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000303665.5|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000455311.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000441763.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr12_+_49761147_49761167	0.317123	SOX9	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr1_-_182641367_182641386	0.316227	SOX9	ENST00000508450.1|RGS8|ENSG00000135824.8|regulator of G-protein signaling 8
hg19_v2_chr14_+_102276192_102276208	0.313607	SOX9	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr17_+_26646121_26646133	0.312702	SOX9	ENST00000226230.6|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr19_+_45504688_45504782	0.312058	SOX9	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr4_+_113152881_113152912	0.308574	SOX9	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr2_-_175629164_175629224	0.308425	SOX9	ENST00000409323.1|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle) 	ENST00000261007.5|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle) 	ENST00000348749.5|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle)
hg19_v2_chr1_+_228337553_228337602	0.307633	SOX9	ENST00000366714.2|GJC2|ENSG00000198835.3|gap junction protein, gamma 2, 47kDa
hg19_v2_chr9_-_72287191_72287222	0.306087	SOX9	ENST00000265381.4|APBA1|ENSG00000107282.5|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v2_chr18_-_44497308_44497499	0.306045	SOX9	ENST00000585916.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000324794.7|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000545673.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2
hg19_v2_chrX_+_129473859_129473904	0.304729	SOX9	ENST00000424447.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr5_+_140593509_140593509	0.303533	SOX9	ENST00000341948.4|PCDHB13|ENSG00000187372.9|protocadherin beta 13
hg19_v2_chr14_-_91884150_91884234	0.30123	SOX9	ENST00000553403.1|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr12_-_49075941_49076001	0.298925	SOX9	ENST00000553086.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000548304.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2
hg19_v2_chr1_-_119530428_119530572	0.297641	SOX9	ENST00000369429.3|TBX15|ENSG00000092607.9|T-box 15
hg19_v2_chr9_-_73483958_73483985	0.297615	SOX9	ENST00000377101.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377106.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000360823.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377105.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr12_-_91546926_91546972	0.292529	SOX9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr2_-_240322643_240322661	0.291728	SOX9	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr3_-_101232019_101232085	0.291102	SOX9	ENST00000394095.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394091.1|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394094.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000358203.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000348610.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000314261.7|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7
hg19_v2_chr14_-_91884115_91884127	0.29096	SOX9	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr18_-_34408902_34409022	0.288827	SOX9	ENST00000593035.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000383056.3|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000588909.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000590337.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr19_+_13906250_13906274	0.288652	SOX9	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr15_-_34659349_34659479	0.288175	SOX9	ENST00000314891.6|LPCAT4|ENSG00000176454.9|lysophosphatidylcholine acyltransferase 4
hg19_v2_chr1_+_33116765_33117088	0.28618	SOX9	ENST00000544435.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373485.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000458695.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000490500.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000445722.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chrX_+_70503037_70503095	0.286168	SOX9	ENST00000535149.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr12_+_69979210_69979252	0.285931	SOX9	ENST00000544368.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr19_-_44100275_44100302	0.285766	SOX9	ENST00000422989.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q 	ENST00000598324.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q
hg19_v2_chr10_+_69644404_69644427	0.285632	SOX9	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr2_+_170590321_170590408	0.28476	SOX9	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr7_+_28452130_28452154	0.284025	SOX9	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr12_+_53443963_53443970	0.281578	SOX9	ENST00000546602.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000552570.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000549700.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr14_-_73493784_73493822	0.280678	SOX9	ENST00000553891.1|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1
hg19_v2_chr1_+_25071848_25071944	0.278617	SOX9	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr11_-_69519410_69519410	0.278506	SOX9	ENST00000294312.3|FGF19|ENSG00000162344.3|fibroblast growth factor 19
hg19_v2_chr11_+_34073269_34073287	0.273678	SOX9	ENST00000389645.3|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr17_+_67498538_67498570	0.271473	SOX9	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr5_+_140557371_140557371	0.269741	SOX9	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr5_+_40679584_40679600	0.268101	SOX9	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr2_-_157198860_157198978	0.26692	SOX9	ENST00000409572.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr17_-_56605341_56605363	0.266189	SOX9	ENST00000583114.1|SEPT4|ENSG00000108387.10|septin 4
hg19_v2_chr3_+_9439579_9439592	0.266056	SOX9	ENST00000406341.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr2_-_54197915_54197977	0.264293	SOX9	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr16_-_15736881_15736928	0.262694	SOX9	ENST00000540441.2|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr1_-_17766198_17766232	0.262557	SOX9	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr9_-_140196703_140196744	0.260252	SOX9	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr13_+_111767650_111767874	0.259956	SOX9	ENST00000449979.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7 	ENST00000370623.3|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr3_-_128294929_128294929	0.257744	SOX9	ENST00000356020.2|C3orf27|ENSG00000198685.2|chromosome 3 open reading frame 27
hg19_v2_chr3_+_196466710_196466824	0.257112	SOX9	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr3_+_9439400_9439414	0.255901	SOX9	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr12_-_81763184_81763202	0.254547	SOX9	ENST00000548670.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000541570.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000553058.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr12_-_24103954_24103972	0.254392	SOX9	ENST00000441133.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5 	ENST00000545921.1|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr14_+_85996507_85996572	0.254122	SOX9	ENST00000554746.1|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr12_+_69979113_69979155	0.252701	SOX9	ENST00000299300.6|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr22_-_50523760_50523787	0.250127	SOX9	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr6_+_43139037_43139094	0.24992	SOX9	ENST00000265354.4|SRF|ENSG00000112658.6|serum response factor (c-fos serum response element-binding transcription factor)
hg19_v2_chr1_-_68698222_68698266	0.244982	SOX9	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr7_+_94537542_94537591	0.244844	SOX9	ENST00000433881.1|PPP1R9A|ENSG00000158528.7|protein phosphatase 1, regulatory subunit 9A
hg19_v2_chr12_+_53443680_53443858	0.244246	SOX9	ENST00000314250.6|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000451358.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr15_+_52311398_52311461	0.242482	SOX9	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr6_-_53213780_53213947	0.241667	SOX9	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr1_+_164529004_164529060	0.239942	SOX9	ENST00000559240.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000367897.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000540236.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000401534.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr6_-_27782548_27782607	0.239495	SOX9	ENST00000333151.3|HIST1H2AJ|ENSG00000182611.3|histone cluster 1, H2aj
hg19_v2_chr13_-_41593425_41593480	0.238882	SOX9	ENST00000239882.3|ELF1|ENSG00000120690.9|E74-like factor 1 (ets domain transcription factor)
hg19_v2_chr12_+_22778116_22778139	0.237924	SOX9	ENST00000538218.1|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr20_+_48884002_48884088	0.235113	SOX9	ENST00000425497.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3	ENST00000445003.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3
hg19_v2_chr5_+_69321074_69321200	0.232419	SOX9	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chrM_+_4431_4475	0.232333	SOX9	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chrX_+_129473916_129474026	0.231693	SOX9	ENST00000545805.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000543953.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000218197.5|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr12_-_54673871_54673925	0.230935	SOX9	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr14_-_73493825_73493920	0.226978	SOX9	ENST00000318876.5|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1 	ENST00000556143.1|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1
hg19_v2_chr18_-_34408802_34408807	0.225853	SOX9	ENST00000590842.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr17_+_36584662_36584730	0.225411	SOX9	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr1_+_43766642_43766667	0.225085	SOX9	ENST00000372476.3|TIE1|ENSG00000066056.9|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg19_v2_chr20_-_40247133_40247194	0.21752	SOX9	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr14_+_91580777_91580793	0.217509	SOX9	ENST00000525393.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000428926.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517362.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr11_-_95522639_95522725	0.216634	SOX9	ENST00000536839.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr22_-_50524298_50524331	0.216547	SOX9	ENST00000311597.5|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr14_+_91581011_91581044	0.216063	SOX9	ENST00000523894.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522322.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523771.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr10_+_63661053_63661079	0.215419	SOX9	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr6_+_41040678_41040722	0.214322	SOX9	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chrX_-_17878827_17878846	0.213717	SOX9	ENST00000360011.1|RAI2|ENSG00000131831.13|retinoic acid induced 2
hg19_v2_chr1_-_184723942_184724047	0.208662	SOX9	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr2_+_208576355_208576475	0.207207	SOX9	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr1_-_221915418_221915518	0.207167	SOX9	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr6_-_107436473_107436543	0.20634	SOX9	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr12_+_69979446_69979471	0.205685	SOX9	ENST00000543146.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr1_-_246580705_246580737	0.205521	SOX9	ENST00000541742.1|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr18_-_34408693_34408780	0.203828	SOX9	ENST00000587382.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000589049.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000587129.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr17_-_72358001_72358085	0.203189	SOX9	ENST00000375366.3|BTBD17|ENSG00000204347.3|BTB (POZ) domain containing 17
hg19_v2_chr9_+_103235365_103235419	0.203125	SOX9	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr2_-_158182410_158182446	0.200077	SOX9	ENST00000419116.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein 	ENST00000410096.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr1_-_32801825_32801980	0.19998	SOX9	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr8_-_93115445_93115462	0.19821	SOX9	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr14_+_91580708_91580730	0.19798	SOX9	ENST00000518868.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr14_+_24641062_24641246	0.196546	SOX9	ENST00000311457.3|REC8|ENSG00000100918.8|REC8 meiotic recombination protein 	ENST00000557806.1|REC8|ENSG00000100918.8|REC8 meiotic recombination protein 	ENST00000559919.1|REC8|ENSG00000100918.8|REC8 meiotic recombination protein
hg19_v2_chrX_-_73512411_73512444	0.195717	SOX9	ENST00000602576.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000429124.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr6_+_27114861_27114896	0.195131	SOX9	ENST00000377459.1|HIST1H2AH|ENSG00000184825.4|histone cluster 1, H2ah
hg19_v2_chr1_+_33116743_33116754	0.194491	SOX9	ENST00000414241.3|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373493.5|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr1_-_26232951_26232959	0.194273	SOX9	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr18_+_6729725_6730042	0.194167	SOX9	ENST00000400091.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000583410.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000584387.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chrX_+_135579670_135579715	0.190818	SOX9	ENST00000218364.4|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr11_-_76155700_76155736	0.190251	SOX9	ENST00000572035.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr19_-_44439387_44439419	0.186696	SOX9	ENST00000269973.5|ZNF45|ENSG00000124459.7|zinc finger protein 45
hg19_v2_chr5_-_60240858_60240905	0.186297	SOX9	ENST00000426742.2|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000265038.5|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000543101.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000439176.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8
hg19_v2_chr3_+_49507559_49507580	0.184783	SOX9	ENST00000421560.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000308775.2|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000545947.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000541308.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000539901.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000538711.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1) 	ENST00000418588.1|DAG1|ENSG00000173402.7|dystroglycan 1 (dystrophin-associated glycoprotein 1)
hg19_v2_chr11_+_68080077_68080127	0.184521	SOX9	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr1_-_167883353_167883453	0.183837	SOX9	ENST00000545172.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr3_+_111718173_111718195	0.182898	SOX9	ENST00000494932.1|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr12_-_81763127_81763171	0.181248	SOX9	ENST00000541017.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr15_-_34502197_34502212	0.181199	SOX9	ENST00000557877.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr16_-_19533404_19533467	0.180578	SOX9	ENST00000353258.3|GDE1|ENSG00000006007.7|glycerophosphodiester phosphodiesterase 1
hg19_v2_chr19_+_18208603_18208614	0.180232	SOX9	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr9_+_22446814_22446840	0.179107	SOX9	ENST00000325870.2|DMRTA1|ENSG00000176399.3|DMRT-like family A1
hg19_v2_chr3_+_49058444_49058618	0.179071	SOX9	ENST00000326925.6|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 	ENST00000395458.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr1_+_26503894_26504025	0.177434	SOX9	ENST00000361530.6|CNKSR1|ENSG00000142675.13|connector enhancer of kinase suppressor of Ras 1 	ENST00000374253.5|CNKSR1|ENSG00000142675.13|connector enhancer of kinase suppressor of Ras 1
hg19_v2_chr14_+_67291158_67291192	0.175572	SOX9	ENST00000555456.1|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chrX_-_75005054_75005094	0.173336	SOX9	ENST00000373359.2|MAGEE2|ENSG00000186675.5|melanoma antigen family E, 2
hg19_v2_chr12_+_49761273_49761330	0.172624	SOX9	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr11_-_76155618_76155676	0.171599	SOX9	ENST00000530759.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr5_+_140787600_140787770	0.170662	SOX9	ENST00000520790.1|PCDHGB6|ENSG00000253305.1|protocadherin gamma subfamily B, 6
hg19_v2_chr19_+_45971246_45971265	0.170488	SOX9	ENST00000585836.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000417353.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000353609.3|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000591858.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000443841.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000590335.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr17_-_7760779_7760896	0.170457	SOX9	ENST00000335155.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575071.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr6_+_72596406_72596454	0.169915	SOX9	ENST00000491071.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr19_+_10765003_10765058	0.169862	SOX9	ENST00000407004.3|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589998.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589600.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr10_+_70748487_70748498	0.168135	SOX9	ENST00000361983.4|KIAA1279|ENSG00000198954.4|KIAA1279
hg19_v2_chr5_+_138678131_138678169	0.167478	SOX9	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr10_+_49514698_49514736	0.167078	SOX9	ENST00000432379.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8 	ENST00000429041.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8 	ENST00000374189.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8
hg19_v2_chr4_+_54966198_54966340	0.16561	SOX9	ENST00000326902.2|GSX2|ENSG00000180613.6|GS homeobox 2 	ENST00000503800.1|GSX2|ENSG00000180613.6|GS homeobox 2
hg19_v2_chr1_-_201123546_201123581	0.16495	SOX9	ENST00000435310.1|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000485839.2|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000367330.1|TMEM9|ENSG00000116857.12|transmembrane protein 9
hg19_v2_chr6_+_32939964_32939994	0.164839	SOX9	ENST00000607833.1|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr17_-_7761172_7761209	0.163038	SOX9	ENST00000333775.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575771.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr19_+_58514229_58514289	0.160845	SOX9	ENST00000546949.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein  	ENST00000553254.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein  	ENST00000547364.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein
hg19_v2_chr14_-_90420862_90420901	0.160197	SOX9	ENST00000556005.1|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11 	ENST00000555872.1|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11
hg19_v2_chr1_+_93913713_93913839	0.159839	SOX9	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr3_+_113616317_113616364	0.15934	SOX9	ENST00000440446.2|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C 	ENST00000488680.1|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C
hg19_v2_chr1_-_155880672_155880715	0.158987	SOX9	ENST00000609492.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368322.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr12_+_130646999_130647019	0.155812	SOX9	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr7_-_92855762_92855837	0.154967	SOX9	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr11_-_33183048_33183077	0.154344	SOX9	ENST00000438862.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr15_-_37392703_37392717	0.152813	SOX9	ENST00000382766.2|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000444725.1|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr2_+_168725458_168725458	0.151579	SOX9	ENST00000392690.3|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr17_-_7761256_7761397	0.150448	SOX9	ENST00000575208.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr1_-_115259337_115259515	0.147112	SOX9	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr1_-_235491462_235491534	0.146984	SOX9	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr10_-_97321165_97321176	0.145799	SOX9	ENST00000306402.6|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr7_+_120591170_120591244	0.144353	SOX9	ENST00000431467.1|ING3|ENSG00000071243.11|inhibitor of growth family, member 3
hg19_v2_chr1_-_201123586_201123637	0.144052	SOX9	ENST00000414605.2|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000367334.5|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000367332.1|TMEM9|ENSG00000116857.12|transmembrane protein 9
hg19_v2_chr11_+_67007518_67007533	0.143807	SOX9	ENST00000530342.1|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A 	ENST00000308783.5|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A
hg19_v2_chr17_-_40306934_40307035	0.143061	SOX9	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr17_+_57642886_57643006	0.142346	SOX9	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr7_+_100450328_100450399	0.141995	SOX9	ENST00000540482.1|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000418037.1|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000428758.1|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000275729.3|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000415287.1|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000354161.3|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9 	ENST00000416675.1|SLC12A9|ENSG00000146828.13|solute carrier family 12, member 9
hg19_v2_chr22_-_30722866_30722911	0.14101	SOX9	ENST00000403477.3|TBC1D10A|ENSG00000099992.11|TBC1 domain family, member 10A
hg19_v2_chr1_-_167883327_167883352	0.140815	SOX9	ENST00000476818.2|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367851.4|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367848.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr18_-_34409116_34409158	0.139791	SOX9	ENST00000334295.4|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr3_-_57583052_57583079	0.139541	SOX9	ENST00000496292.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4 	ENST00000489843.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr1_-_27339317_27339375	0.139386	SOX9	ENST00000289166.5|FAM46B|ENSG00000158246.7|family with sequence similarity 46, member B
hg19_v2_chr10_-_11653753_11653806	0.137158	SOX9	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr20_-_34330129_34330234	0.137076	SOX9	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr17_+_54230819_54230871	0.136681	SOX9	ENST00000318698.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1 	ENST00000566473.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v2_chr16_+_50775948_50775961	0.135645	SOX9	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr7_+_129015484_129015519	0.135505	SOX9	ENST00000490911.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr6_+_26183958_26184005	0.135418	SOX9	ENST00000356530.3|HIST1H2BE|ENSG00000197697.3|histone cluster 1, H2be
hg19_v2_chr6_-_79944336_79944440	0.131755	SOX9	ENST00000344726.5|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3 	ENST00000275036.7|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3
hg19_v2_chr22_-_30722912_30723035	0.131136	SOX9	ENST00000215790.7|TBC1D10A|ENSG00000099992.11|TBC1 domain family, member 10A
hg19_v2_chr11_-_102323489_102323576	0.130236	SOX9	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr7_+_102389434_102389497	0.12995	SOX9	ENST00000409231.3|FAM185A|ENSG00000222011.4|family with sequence similarity 185, member A 	ENST00000418198.1|FAM185A|ENSG00000222011.4|family with sequence similarity 185, member A
hg19_v2_chr5_+_140767452_140767452	0.129191	SOX9	ENST00000519479.1|PCDHGB4|ENSG00000253953.1|protocadherin gamma subfamily B, 4
hg19_v2_chr1_+_155293702_155293729	0.128387	SOX9	ENST00000368347.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr7_-_71868354_71868431	0.128011	SOX9	ENST00000412588.1|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr3_-_57583130_57583152	0.127098	SOX9	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr1_+_10271674_10271674	0.126	SOX9	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr10_-_97321112_97321163	0.124791	SOX9	ENST00000607232.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371227.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371249.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371247.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371246.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000393949.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000353505.5|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000347291.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr14_-_65569186_65569243	0.124401	SOX9	ENST00000555932.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000358664.4|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000284165.6|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000358402.4|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000246163.2|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000556979.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000555667.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000557746.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000556443.1|MAX|ENSG00000125952.14|MYC associated factor X
hg19_v2_chr12_-_95611149_95611249	0.123384	SOX9	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr17_+_35851570_35851667	0.123039	SOX9	ENST00000394386.1|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr15_+_85144217_85144281	0.122843	SOX9	ENST00000540936.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000448803.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546275.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546148.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000442073.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000334141.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000358472.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000502939.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000379358.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000327179.6|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr5_+_76011868_76012005	0.119497	SOX9	ENST00000319211.4|F2R|ENSG00000181104.6|coagulation factor II (thrombin) receptor
hg19_v2_chr21_-_19191703_19191718	0.118695	SOX9	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr17_+_46970134_46970170	0.117215	SOX9	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr5_-_168006591_168006638	0.116312	SOX9	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr7_+_29519486_29519549	0.114558	SOX9	ENST00000409041.4|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr20_-_43150601_43150751	0.114121	SOX9	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr1_-_152297679_152297722	0.113728	SOX9	ENST00000368799.1|FLG|ENSG00000143631.10|filaggrin
hg19_v2_chr7_+_12727250_12727265	0.112452	SOX9	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr1_-_217311090_217311097	0.112116	SOX9	ENST00000493603.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000366940.2|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr2_-_97405775_97405816	0.11139	SOX9	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr4_+_175205038_175205094	0.111338	SOX9	ENST00000457424.2|CEP44|ENSG00000164118.8|centrosomal protein 44kDa 	ENST00000514712.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chr8_+_144295067_144295131	0.111164	SOX9	ENST00000330824.2|GPIHBP1|ENSG00000182851.2|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg19_v2_chr10_-_94050820_94050868	0.111003	SOX9	ENST00000265997.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr11_-_102323740_102323780	0.110723	SOX9	ENST00000398136.2|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr15_-_52263937_52264003	0.110178	SOX9	ENST00000315141.5|LEO1|ENSG00000166477.8|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 	ENST00000299601.5|LEO1|ENSG00000166477.8|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr12_-_8815299_8815331	0.109694	SOX9	ENST00000535336.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr10_-_13390270_13390316	0.105273	SOX9	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr7_+_134464414_134464429	0.104219	SOX9	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr15_+_40886439_40886493	0.104144	SOX9	ENST00000532056.1|CASC5|ENSG00000137812.15|cancer susceptibility candidate 5 	ENST00000399668.2|CASC5|ENSG00000137812.15|cancer susceptibility candidate 5
hg19_v2_chr11_-_6677018_6677085	0.103638	SOX9	ENST00000299441.3|DCHS1|ENSG00000166341.6|dachsous cadherin-related 1
hg19_v2_chr2_+_160568978_160569064	0.102626	SOX9	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr2_-_200323414_200323468	0.102529	SOX9	ENST00000443023.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr12_+_8666126_8666182	0.102497	SOX9	ENST00000299665.2|CLEC4D|ENSG00000166527.3|C-type lectin domain family 4, member D
hg19_v2_chr2_+_223536428_223536505	0.102384	SOX9	ENST00000446656.3|MOGAT1|ENSG00000124003.9|monoacylglycerol O-acyltransferase 1
hg19_v2_chr12_-_10251539_10251560	0.101647	SOX9	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr15_+_85923856_85923987	0.099491	SOX9	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr17_-_57232525_57232584	0.0991366	SOX9	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr4_-_76598296_76598318	0.0990918	SOX9	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr2_-_111230393_111230393	0.0984522	SOX9	ENST00000447537.2|LIMS3L|ENSG00000257207.4|LIM and senescent cell antigen-like-containing domain protein 3; Uncharacterized protein; cDNA FLJ59124, highly similar to Particularly interesting newCys-His protein; cDNA, FLJ79109, highly similar to Particularly interesting newCys-His protein  	ENST00000413601.2|LIMS3L|ENSG00000256671.5|LIM and senescent cell antigen-like domains 3-like
hg19_v2_chr12_-_8815477_8815490	0.0984432	SOX9	ENST00000433590.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr4_-_140544386_140544413	0.0979732	SOX9	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr4_-_83350580_83350600	0.0978861	SOX9	ENST00000349655.4|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like 	ENST00000602300.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr17_+_75447326_75447457	0.0967998	SOX9	ENST00000591088.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr7_+_11013491_11013553	0.0965618	SOX9	ENST00000403050.3|PHF14|ENSG00000106443.10|PHD finger protein 14 	ENST00000445996.2|PHF14|ENSG00000106443.10|PHD finger protein 14
hg19_v2_chr12_+_22778009_22778112	0.0964882	SOX9	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr14_+_100070869_100070893	0.0964834	SOX9	ENST00000502101.2|RP11-543C4.1|ENSG00000247970.2|RP11-543C4.1
hg19_v2_chr18_+_3451646_3451722	0.0954436	SOX9	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr18_-_21891460_21891506	0.0944539	SOX9	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr17_+_9066252_9066271	0.0933618	SOX9	ENST00000436734.1|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr11_+_60691924_60691966	0.0927651	SOX9	ENST00000544065.1|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000453848.2|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000005286.4|TMEM132A|ENSG00000006118.10|transmembrane protein 132A
hg19_v2_chr7_+_5632436_5632454	0.0924841	SOX9	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr17_-_39743139_39743173	0.0919971	SOX9	ENST00000167586.6|KRT14|ENSG00000186847.5|keratin 14
hg19_v2_chr7_-_99774945_99775026	0.0906132	SOX9	ENST00000292377.2|GPC2|ENSG00000213420.3|glypican 2
hg19_v2_chr7_-_14942944_14942997	0.089956	SOX9	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr20_+_42086525_42086568	0.0898604	SOX9	ENST00000244020.3|SRSF6|ENSG00000124193.10|serine/arginine-rich splicing factor 6
hg19_v2_chr12_-_54020107_54020199	0.0896405	SOX9	ENST00000588232.1|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000548446.2|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000420353.2|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000591397.1|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000415113.1|ATF7|ENSG00000170653.14|activating transcription factor 7
hg19_v2_chr19_+_7660716_7660802	0.0896194	SOX9	ENST00000160298.4|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3 	ENST00000446248.2|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3
hg19_v2_chr14_+_91580732_91580746	0.0895247	SOX9	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr8_+_61429416_61429502	0.0891178	SOX9	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr3_+_178253993_178254025	0.0875046	SOX9	ENST00000420517.2|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000452583.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr1_+_155294342_155294368	0.0862099	SOX9	ENST00000292254.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr1_-_176176114_176176259	0.083813	SOX9	ENST00000308769.8|RFWD2|ENSG00000143207.15|ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
hg19_v2_chr8_+_42195972_42195991	0.0827473	SOX9	ENST00000532157.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000265421.4|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000520008.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr4_-_83351294_83351417	0.0823846	SOX9	ENST00000502762.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr8_-_101965559_101965570	0.0821058	SOX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr9_-_99064429_99064442	0.0794138	SOX9	ENST00000375263.3|HSD17B3|ENSG00000130948.5|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v2_chrX_-_85302531_85302570	0.076846	SOX9	ENST00000537751.1|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000358786.4|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000357749.2|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1)
hg19_v2_chr17_+_77751931_77752014	0.0760991	SOX9	ENST00000310942.4|CBX2|ENSG00000173894.6|chromobox homolog 2 	ENST00000269399.5|CBX2|ENSG00000173894.6|chromobox homolog 2
hg19_v2_chr17_+_59489112_59489112	0.0752735	SOX9	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr14_+_55518349_55518423	0.0745087	SOX9	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr1_-_26233423_26233482	0.0740979	SOX9	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr3_-_8686479_8686486	0.074024	SOX9	ENST00000544814.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans) 	ENST00000427408.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans)
hg19_v2_chr2_-_175869936_175869954	0.0715407	SOX9	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr1_+_200708671_200708744	0.0713273	SOX9	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr1_+_155294264_155294332	0.0704234	SOX9	ENST00000368349.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr7_+_2671663_2671790	0.0698529	SOX9	ENST00000407643.1|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr7_+_2671568_2671606	0.0695706	SOX9	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr14_+_39644387_39644417	0.0695448	SOX9	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr16_-_67217844_67217943	0.0695407	SOX9	ENST00000563902.1|KIAA0895L|ENSG00000196123.8|KIAA0895-like 	ENST00000561621.1|KIAA0895L|ENSG00000196123.8|KIAA0895-like 	ENST00000290881.7|KIAA0895L|ENSG00000196123.8|KIAA0895-like
hg19_v2_chr5_+_170736243_170736288	0.0693246	SOX9	ENST00000296921.5|TLX3|ENSG00000164438.5|T-cell leukemia homeobox 3
hg19_v2_chr16_-_46782221_46782263	0.0687835	SOX9	ENST00000394809.4|MYLK3|ENSG00000140795.8|myosin light chain kinase 3
hg19_v2_chr9_+_15422702_15422883	0.0684455	SOX9	ENST00000380821.3|SNAPC3|ENSG00000164975.11|small nuclear RNA activating complex, polypeptide 3, 50kDa 	ENST00000421710.1|SNAPC3|ENSG00000164975.11|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v2_chr3_+_89156799_89156831	0.0683263	SOX9	ENST00000452448.2|EPHA3|ENSG00000044524.6|EPH receptor A3 	ENST00000494014.1|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr17_+_46970178_46970180	0.0680621	SOX9	ENST00000393366.2|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000506855.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr12_-_8815215_8815298	0.067852	SOX9	ENST00000544889.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000543369.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr7_-_99679324_99679371	0.0678216	SOX9	ENST00000292393.5|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000413658.2|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000412947.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000441298.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000449785.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000299667.4|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000424697.1|ZNF3|ENSG00000166526.12|zinc finger protein 3
hg19_v2_chr6_+_13272904_13272989	0.0675331	SOX9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr7_-_148725733_148725759	0.0674979	SOX9	ENST00000286091.4|PDIA4|ENSG00000155660.6|protein disulfide isomerase family A, member 4
hg19_v2_chr19_-_44123734_44123796	0.065857	SOX9	ENST00000598676.1|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr7_+_99775366_99775518	0.0655172	SOX9	ENST00000394018.2|STAG3|ENSG00000066923.13|stromal antigen 3 	ENST00000416412.1|STAG3|ENSG00000066923.13|stromal antigen 3
hg19_v2_chr8_+_42196000_42196021	0.0651522	SOX9	ENST00000518925.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000538005.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr7_-_112635675_112635720	0.0651498	SOX9	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr7_+_23146271_23146285	0.0647764	SOX9	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr14_-_90421028_90421121	0.0646505	SOX9	ENST00000267544.9|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11 	ENST00000316738.7|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11 	ENST00000538485.2|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11 	ENST00000556609.1|EFCAB11|ENSG00000140025.11|EF-hand calcium binding domain 11
hg19_v2_chr11_-_5276008_5276041	0.0634506	SOX9	ENST00000336906.4|HBG2|ENSG00000196565.8|hemoglobin, gamma G
hg19_v2_chr1_-_26232522_26232644	0.0620087	SOX9	ENST00000399728.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr19_-_7694417_7694459	0.0614714	SOX9	ENST00000358368.4|XAB2|ENSG00000076924.7|XPA binding protein 2 	ENST00000534844.1|XAB2|ENSG00000076924.7|XPA binding protein 2
hg19_v2_chr20_-_30310336_30310400	0.0609631	SOX9	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr12_-_54019755_54019804	0.060929	SOX9	ENST00000588078.1|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000591834.1|RP11-793H13.10|ENSG00000267281.2|Uncharacterized protein  	ENST00000551480.2|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000548118.2|ATF7|ENSG00000170653.14|activating transcription factor 7 	ENST00000456903.4|ATF7|ENSG00000170653.14|activating transcription factor 7
hg19_v2_chr12_-_10251603_10251619	0.0602948	SOX9	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chrX_-_132352373_132352384	0.0601911	SOX9	ENST00000310125.4|TFDP3|ENSG00000183434.9|transcription factor Dp family, member 3
hg19_v2_chr3_-_149510553_149510610	0.0601788	SOX9	ENST00000462519.2|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000446160.1|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000383050.3|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1
hg19_v2_chr5_+_140248518_140248689	0.060139	SOX9	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr3_-_11623804_11623865	0.060099	SOX9	ENST00000451674.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr12_+_49761224_49761259	0.0598715	SOX9	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr13_-_31040060_31040102	0.0593689	SOX9	ENST00000326004.4|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000341423.5|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr10_-_104953009_104953061	0.0584928	SOX9	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr1_+_62417957_62417993	0.0583014	SOX9	ENST00000307297.7|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000543708.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr1_-_26324534_26324648	0.0582457	SOX9	ENST00000374284.1|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa 	ENST00000441420.1|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa 	ENST00000374282.3|PAFAH2|ENSG00000158006.9|platelet-activating factor acetylhydrolase 2, 40kDa
hg19_v2_chr17_+_46970127_46970132	0.0579567	SOX9	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chrX_+_89176881_89176955	0.0578158	SOX9	ENST00000283891.5|TGIF2LX|ENSG00000153779.8|TGFB-induced factor homeobox 2-like, X-linked 	ENST00000561129.2|TGIF2LX|ENSG00000153779.8|TGFB-induced factor homeobox 2-like, X-linked
hg19_v2_chr6_+_148663729_148663847	0.0559719	SOX9	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr16_+_66400533_66400545	0.0546766	SOX9	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr1_+_16085244_16085255	0.0535879	SOX9	ENST00000400773.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chrX_+_46306714_46306741	0.0528325	SOX9	ENST00000298190.6|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000377919.2|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000476762.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000478600.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4
hg19_v2_chr6_+_28193037_28193117	0.052183	SOX9	ENST00000531981.1|ZSCAN9|ENSG00000137185.7|zinc finger and SCAN domain containing 9 	ENST00000425468.2|ZSCAN9|ENSG00000137185.7|zinc finger and SCAN domain containing 9 	ENST00000252207.5|ZSCAN9|ENSG00000137185.7|zinc finger and SCAN domain containing 9 	ENST00000531979.1|ZSCAN9|ENSG00000137185.7|zinc finger and SCAN domain containing 9 	ENST00000527436.1|ZSCAN9|ENSG00000137185.7|zinc finger and SCAN domain containing 9
hg19_v2_chr16_+_19467772_19467839	0.0518471	SOX9	ENST00000219821.5|TMC5|ENSG00000103534.12|transmembrane channel-like 5 	ENST00000561503.1|TMC5|ENSG00000103534.12|transmembrane channel-like 5 	ENST00000564959.1|TMC5|ENSG00000103534.12|transmembrane channel-like 5
hg19_v2_chr12_-_10251576_10251599	0.050935	SOX9	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr17_-_57232596_57232630	0.0506306	SOX9	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr5_+_140213815_140213969	0.0499156	SOX9	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr12_-_57882498_57882509	0.0497329	SOX9	ENST00000550288.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr22_+_38864041_38864150	0.0494312	SOX9	ENST00000216014.4|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 	ENST00000409006.3|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v2_chr15_+_31619013_31619095	0.0493826	SOX9	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chrY_-_21239221_21239302	0.0489729	SOX9	ENST00000447937.1|TTTY14|ENSG00000176728.3|testis-specific transcript, Y-linked 14 (non-protein coding) 	ENST00000331787.2|TTTY14|ENSG00000176728.3|testis-specific transcript, Y-linked 14 (non-protein coding)
hg19_v2_chr1_+_209602156_209602183	0.0486578	SOX9	ENST00000429156.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000366437.3|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000603283.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000431096.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr17_-_62308087_62308116	0.0475147	SOX9	ENST00000583097.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr3_+_189507460_189507471	0.0472156	SOX9	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr18_+_56530794_56530845	0.0467308	SOX9	ENST00000590285.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000586085.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000589288.1|ZNF532|ENSG00000074657.9|zinc finger protein 532
hg19_v2_chr7_+_16685756_16685820	0.0465043	SOX9	ENST00000415365.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000258761.3|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000433922.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000452975.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000405202.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr5_+_94890778_94890837	0.0461592	SOX9	ENST00000380009.4|ARSK|ENSG00000164291.12|arylsulfatase family, member K
hg19_v2_chr5_-_147162263_147162338	0.0453767	SOX9	ENST00000333010.6|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2 	ENST00000265272.5|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr16_+_50775971_50776014	0.0443465	SOX9	ENST00000311559.9|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000564326.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000566206.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr5_-_147162078_147162106	0.0428006	SOX9	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr18_+_7946941_7946952	0.0427659	SOX9	ENST00000444013.1|PTPRM|ENSG00000173482.12|protein tyrosine phosphatase, receptor type, M
hg19_v2_chr15_+_89922345_89922362	0.0419709	SOX9	ENST00000558982.1|LINC00925|ENSG00000255571.2|long intergenic non-protein coding RNA 925
hg19_v2_chr16_-_22385901_22385947	0.0416216	SOX9	ENST00000268383.2|CDR2|ENSG00000140743.3|cerebellar degeneration-related protein 2, 62kDa
hg19_v2_chr21_-_40720974_40720994	0.0411511	SOX9	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr6_-_27440460_27440505	0.0405806	SOX9	ENST00000377419.1|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr3_-_88108192_88108203	0.0398087	SOX9	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr21_+_17442799_17442853	0.039328	SOX9	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr1_-_225840747_225840860	0.0390801	SOX9	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr9_+_108463234_108463265	0.0388911	SOX9	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr12_+_54891495_54891526	0.0385495	SOX9	ENST00000293373.6|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr12_-_57882577_57882614	0.0374483	SOX9	ENST00000393797.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chrX_+_107288239_107288259	0.0369008	SOX9	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr6_-_27440837_27440912	0.0367466	SOX9	ENST00000211936.6|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr14_+_102276209_102276242	0.0353248	SOX9	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chrX_-_2418936_2419024	0.0315607	SOX9	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr19_-_40324767_40324841	0.0312512	SOX9	ENST00000601972.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000430012.2|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000323039.5|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000348817.3|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr18_+_18943554_18943587	0.030381	SOX9	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr16_+_27078219_27078229	0.0299031	SOX9	ENST00000418886.1|C16orf82|ENSG00000234186.2|chromosome 16 open reading frame 82
hg19_v2_chr4_+_54243862_54243874	0.0296643	SOX9	ENST00000306932.6|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1
hg19_v2_chr1_+_160370344_160370406	0.0292679	SOX9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr12_-_45270151_45270162	0.0287389	SOX9	ENST00000429094.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr19_+_7694623_7694710	0.0281729	SOX9	ENST00000594797.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000456958.3|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000601406.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae)
hg19_v2_chrX_-_15683147_15683159	0.0274863	SOX9	ENST00000380342.3|TMEM27|ENSG00000147003.5|transmembrane protein 27
hg19_v2_chr2_-_128568721_128568766	0.0273695	SOX9	ENST00000322313.4|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000393006.1|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000409658.3|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000436787.1|WDR33|ENSG00000136709.7|WD repeat domain 33
hg19_v2_chr19_+_7895074_7895119	0.0270452	SOX9	ENST00000270530.4|EVI5L|ENSG00000142459.4|ecotropic viral integration site 5-like
hg19_v2_chr20_+_61147651_61147666	0.025505	SOX9	ENST00000370527.3|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166 	ENST00000370524.2|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166
hg19_v2_chr19_+_16222439_16222472	0.0253428	SOX9	ENST00000300935.3|RAB8A|ENSG00000167461.7|RAB8A, member RAS oncogene family
hg19_v2_chr1_+_10459111_10459175	0.024834	SOX9	ENST00000541529.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000270776.8|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000483936.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000538557.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase
hg19_v2_chr3_+_69985792_69985874	0.0241458	SOX9	ENST00000531774.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr16_+_15528332_15528385	0.0239272	SOX9	ENST00000566490.1|C16orf45|ENSG00000166780.6|chromosome 16 open reading frame 45
hg19_v2_chr12_-_31479045_31479074	0.023908	SOX9	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr7_-_38289173_38289173	0.0238083	SOX9	ENST00000436911.2|TRGC2|ENSG00000227191.2|T cell receptor gamma constant 2
hg19_v2_chr11_-_8190534_8190602	0.0237311	SOX9	ENST00000309737.6|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000425599.2|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000539720.1|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000531450.1|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000419822.2|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000335425.7|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000343202.4|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone
hg19_v2_chr13_-_84456527_84456541	0.0230338	SOX9	ENST00000377084.2|SLITRK1|ENSG00000178235.6|SLIT and NTRK-like family, member 1
hg19_v2_chr16_+_88636789_88636827	0.0227269	SOX9	ENST00000301011.5|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18 	ENST00000452588.2|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18
hg19_v2_chr21_-_40720995_40721126	0.021609	SOX9	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr11_+_126225529_126225660	0.0210053	SOX9	ENST00000227495.6|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000444328.2|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000356132.4|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg19_v2_chr17_-_4871085_4871167	0.0209328	SOX9	ENST00000575142.1|SPAG7|ENSG00000091640.3|sperm associated antigen 7 	ENST00000206020.3|SPAG7|ENSG00000091640.3|sperm associated antigen 7
hg19_v2_chr3_-_193272874_193272911	0.020797	SOX9	ENST00000342695.4|ATP13A4|ENSG00000127249.10|ATPase type 13A4
hg19_v2_chr6_+_32132360_32132437	0.0201217	SOX9	ENST00000333845.6|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000395512.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000432129.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8
hg19_v2_chr5_-_16936340_16936418	0.019803	SOX9	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr20_-_13971255_13971264	0.0190298	SOX9	ENST00000284951.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans) 	ENST00000378072.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v2_chr8_+_26435359_26435426	0.0183466	SOX9	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr16_+_50776021_50776045	0.0180466	SOX9	ENST00000566679.2|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000564634.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000398568.2|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr3_+_43328004_43328095	0.0176227	SOX9	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr7_-_122840015_122840040	0.0152147	SOX9	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr15_+_71184931_71184974	0.0145176	SOX9	ENST00000560369.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000260382.5|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr7_+_29519662_29519727	0.0140878	SOX9	ENST00000424025.2|CHN2|ENSG00000106069.16|chimerin 2 	ENST00000439711.2|CHN2|ENSG00000106069.16|chimerin 2 	ENST00000421775.2|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr15_+_41624892_41625111	0.0138675	SOX9	ENST00000260359.6|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450318.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450592.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000559596.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000414849.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560747.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560177.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1
hg19_v2_chr12_-_45270077_45270143	0.013386	SOX9	ENST00000551601.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000549027.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000452445.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chrX_+_85403445_85403479	0.0126425	SOX9	ENST00000373131.1|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr16_+_3019552_3019559	0.0126167	SOX9	ENST00000572687.1|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr16_-_27561209_27561244	0.0125863	SOX9	ENST00000356183.4|GTF3C1|ENSG00000077235.13|general transcription factor IIIC, polypeptide 1, alpha 220kDa 	ENST00000561623.1|GTF3C1|ENSG00000077235.13|general transcription factor IIIC, polypeptide 1, alpha 220kDa
hg19_v2_chr12_-_18243119_18243133	0.0125182	SOX9	ENST00000538724.1|RERGL|ENSG00000111404.2|RERG/RAS-like 	ENST00000229002.2|RERGL|ENSG00000111404.2|RERG/RAS-like
hg19_v2_chr12_+_70760056_70760085	0.0114483	SOX9	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr1_-_53018654_53018777	0.0112628	SOX9	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr13_-_28545276_28545276	0.0110974	SOX9	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr19_-_45004556_45004581	0.0104772	SOX9	ENST00000587047.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000391956.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000221327.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000586637.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000591064.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000592529.1|ZNF180|ENSG00000167384.6|zinc finger protein 180
hg19_v2_chrX_+_107288197_107288212	0.00990239	SOX9	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr19_-_1568057_1568142	0.0090334	SOX9	ENST00000402693.4|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D 	ENST00000388824.6|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D
hg19_v2_chr14_+_93357749_93357769	0.0083923	SOX9	ENST00000557689.1|RP11-862G15.1|ENSG00000258742.1|RP11-862G15.1
hg19_v2_chr16_-_1661988_1662111	0.00826207	SOX9	ENST00000426508.2|IFT140|ENSG00000187535.9|intraflagellar transport 140 homolog (Chlamydomonas)
hg19_v2_chr14_-_21516590_21516692	0.00819191	SOX9	ENST00000555026.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr20_-_30795511_30795594	0.00782535	SOX9	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr16_+_56970567_56970647	0.00747477	SOX9	ENST00000563911.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr7_+_139528952_139529038	0.00713201	SOX9	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr17_-_42441204_42441243	0.00568928	SOX9	ENST00000293443.7|FAM171A2|ENSG00000161682.10|family with sequence similarity 171, member A2
hg19_v2_chr2_+_46926326_46926452	0.00558948	SOX9	ENST00000394861.2|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr9_+_75263565_75263565	0.00531976	SOX9	ENST00000396237.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr6_-_135375921_135375969	0.0051331	SOX9	ENST00000367820.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000314674.3|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000524715.1|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000415177.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000367826.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae)
hg19_v2_chrX_+_85403487_85403625	0.00507407	SOX9	ENST00000373125.4|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr1_+_50571949_50571964	0.00443705	SOX9	ENST00000357083.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr16_+_3019246_3019304	0.00440948	SOX9	ENST00000318782.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV 	ENST00000293978.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr7_+_76751926_76751960	0.00419123	SOX9	ENST00000285871.4|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146 	ENST00000431197.1|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146
hg19_v2_chr12_+_69633407_69633422	0.00404221	SOX9	ENST00000551516.1|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr3_-_167191814_167191842	0.003958	SOX9	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr6_+_37787262_37787291	0.00314372	SOX9	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr6_+_37787458_37787587	0.00306732	SOX9	ENST00000373391.2|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr2_-_107503558_107503580	0.00264948	SOX9	ENST00000361686.4|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 	ENST00000409087.3|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v2_chr1_+_14075865_14075898	0.00242915	SOX9	ENST00000413440.1|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chrX_-_130037198_130037234	0.00173639	SOX9	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr9_+_112403059_112403079	0.00125146	SOX9	ENST00000374531.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr13_-_107214291_107214305	0.000610307	SOX9	ENST00000375926.1|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr11_-_33183006_33183046	0.000222067	SOX9	ENST00000524827.1|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000323959.4|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000431742.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr7_+_120590803_120590857	0.000151342	SOX9	ENST00000315870.5|ING3|ENSG00000071243.11|inhibitor of growth family, member 3 	ENST00000339121.5|ING3|ENSG00000071243.11|inhibitor of growth family, member 3 	ENST00000445699.1|ING3|ENSG00000071243.11|inhibitor of growth family, member 3
