hg19_v2_chr4_-_149365827_149365870	0.81745	UCCCUUU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr10_-_81205373_81205429	0.772646	UCCCUUU	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr18_-_22932080_22932170	0.656511	UCCCUUU	ENST00000584787.1|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000361524.3|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000538137.2|ZNF521|ENSG00000198795.6|zinc finger protein 521
hg19_v2_chr8_-_93115445_93115462	0.626548	UCCCUUU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr12_+_20522179_20522203	0.496795	UCCCUUU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr6_+_15246501_15246527	0.377911	UCCCUUU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr6_+_1610681_1610681	0.36248	UCCCUUU	ENST00000380874.2|FOXC1|ENSG00000054598.5|forkhead box C1
hg19_v2_chr2_-_157189180_157189290	0.355697	UCCCUUU	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr6_-_16761678_16761721	0.297698	UCCCUUU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr1_+_66999799_66999965	0.2558	UCCCUUU	ENST00000371035.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371036.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371037.4|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1
hg19_v2_chr1_+_78470530_78470551	0.251906	UCCCUUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr15_+_57210818_57210930	0.24988	UCCCUUU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr9_-_20622478_20622542	0.235827	UCCCUUU	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr14_-_91526922_91527001	0.227884	UCCCUUU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr19_+_10527449_10527619	0.227434	UCCCUUU	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr17_-_66287257_66287276	0.225056	UCCCUUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr11_-_57283159_57283259	0.218184	UCCCUUU	ENST00000533263.1|SLC43A1|ENSG00000149150.4|solute carrier family 43 (amino acid system L transporter), member 1 	ENST00000278426.3|SLC43A1|ENSG00000149150.4|solute carrier family 43 (amino acid system L transporter), member 1
hg19_v2_chr22_+_40573921_40573946	0.202827	UCCCUUU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr2_-_152684977_152685021	0.195428	UCCCUUU	ENST00000428992.2|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A 	ENST00000295087.8|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A
hg19_v2_chr5_+_95066823_95066879	0.191943	UCCCUUU	ENST00000506817.1|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3 	ENST00000379982.3|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3
hg19_v2_chr9_-_140196703_140196744	0.184347	UCCCUUU	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr2_+_203499901_203499911	0.17914	UCCCUUU	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr20_-_35374456_35374513	0.163425	UCCCUUU	ENST00000373803.2|NDRG3|ENSG00000101079.16|NDRG family member 3 	ENST00000359675.2|NDRG3|ENSG00000101079.16|NDRG family member 3 	ENST00000540765.1|NDRG3|ENSG00000101079.16|NDRG family member 3 	ENST00000349004.1|NDRG3|ENSG00000101079.16|NDRG family member 3
hg19_v2_chr5_+_148960931_148961073	0.160525	UCCCUUU	ENST00000333677.6|ARHGEF37|ENSG00000183111.7|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v2_chr17_+_30469473_30469556	0.15449	UCCCUUU	ENST00000333942.6|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000358365.3|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000583994.1|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000545287.2|RHOT1|ENSG00000126858.12|ras homolog family member T1
hg19_v2_chr2_+_148778570_148778589	0.151567	UCCCUUU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chrX_+_28605516_28605608	0.14751	UCCCUUU	ENST00000378993.1|IL1RAPL1|ENSG00000169306.5|interleukin 1 receptor accessory protein-like 1
hg19_v2_chr2_-_105946491_105946491	0.142867	UCCCUUU	ENST00000393359.2|TGFBRAP1|ENSG00000135966.8|transforming growth factor, beta receptor associated protein 1
hg19_v2_chrX_-_20284958_20285039	0.135515	UCCCUUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr3_+_44626446_44626477	0.131258	UCCCUUU	ENST00000441021.1|ZNF660|ENSG00000144792.5|zinc finger protein 660 	ENST00000322734.2|ZNF660|ENSG00000144792.5|zinc finger protein 660
hg19_v2_chr11_-_66115032_66115163	0.129903	UCCCUUU	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr5_-_693500_693511	0.129305	UCCCUUU	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr12_+_122516626_122516645	0.128936	UCCCUUU	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chrX_+_9983602_9983602	0.121998	UCCCUUU	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr16_+_68119440_68119561	0.121803	UCCCUUU	ENST00000346183.3|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000329524.4|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr12_+_51318513_51318534	0.121769	UCCCUUU	ENST00000332160.4|METTL7A|ENSG00000185432.10|methyltransferase like 7A
hg19_v2_chr19_+_34919257_34919332	0.121115	UCCCUUU	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr6_+_125283566_125283691	0.120502	UCCCUUU	ENST00000521654.2|RNF217|ENSG00000146373.12|ring finger protein 217
hg19_v2_chr7_+_142552792_142552902	0.114583	UCCCUUU	ENST00000392957.2|EPHB6|ENSG00000106123.7|EPH receptor B6 	ENST00000442129.1|EPHB6|ENSG00000106123.7|EPH receptor B6
hg19_v2_chr13_-_31736027_31736064	0.114401	UCCCUUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr4_-_114682936_114683083	0.112819	UCCCUUU	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr8_-_57123815_57123867	0.112679	UCCCUUU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr16_+_30406721_30406820	0.111733	UCCCUUU	ENST00000320159.2|ZNF48|ENSG00000180035.6|zinc finger protein 48
hg19_v2_chrX_-_119694538_119694555	0.110937	UCCCUUU	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr3_-_171178157_171178225	0.109964	UCCCUUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr14_-_74253948_74253964	0.109201	UCCCUUU	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chr5_-_127873659_127873735	0.107575	UCCCUUU	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr11_+_63706444_63706486	0.105862	UCCCUUU	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr15_+_41523335_41523350	0.104673	UCCCUUU	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr8_-_91658303_91658327	0.103164	UCCCUUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr1_+_2160134_2160134	0.102864	UCCCUUU	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr6_-_8064567_8064652	0.0976013	UCCCUUU	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr1_+_178694300_178694346	0.0972321	UCCCUUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr3_-_9811595_9811666	0.0971698	UCCCUUU	ENST00000256460.3|CAMK1|ENSG00000134072.6|calcium/calmodulin-dependent protein kinase I
hg19_v2_chr9_-_129885010_129885162	0.0971429	UCCCUUU	ENST00000373425.3|ANGPTL2|ENSG00000136859.5|angiopoietin-like 2
hg19_v2_chr1_-_209979375_209979389	0.0971304	UCCCUUU	ENST00000367021.3|IRF6|ENSG00000117595.6|interferon regulatory factor 6
hg19_v2_chr14_+_57735614_57735629	0.0960256	UCCCUUU	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr3_+_33155444_33155492	0.0948974	UCCCUUU	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr12_-_49488573_49488602	0.0940198	UCCCUUU	ENST00000266991.2|DHH|ENSG00000139549.2|desert hedgehog
hg19_v2_chr1_+_90098606_90098635	0.0939555	UCCCUUU	ENST00000370454.4|LRRC8C|ENSG00000171488.10|leucine rich repeat containing 8 family, member C
hg19_v2_chrX_-_18372792_18372847	0.0936428	UCCCUUU	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr4_-_85887503_85887544	0.0924503	UCCCUUU	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr10_-_35930219_35930362	0.0910166	UCCCUUU	ENST00000374694.1|FZD8|ENSG00000177283.4|frizzled family receptor 8
hg19_v2_chr3_+_183873098_183873230	0.0895825	UCCCUUU	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr6_-_52441713_52441784	0.0854961	UCCCUUU	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr3_-_114790179_114790222	0.0852366	UCCCUUU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr6_+_7107999_7108054	0.0840073	UCCCUUU	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr12_-_109125285_109125372	0.0839636	UCCCUUU	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chrX_-_117250740_117250828	0.0833579	UCCCUUU	ENST00000371882.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000540167.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000545703.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr10_-_14590644_14590669	0.0818192	UCCCUUU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr11_-_27494279_27494308	0.079991	UCCCUUU	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr11_+_925824_925976	0.0799459	UCCCUUU	ENST00000525796.1|AP2A2|ENSG00000183020.9|adaptor-related protein complex 2, alpha 2 subunit 	ENST00000534328.1|AP2A2|ENSG00000183020.9|adaptor-related protein complex 2, alpha 2 subunit 	ENST00000448903.2|AP2A2|ENSG00000183020.9|adaptor-related protein complex 2, alpha 2 subunit 	ENST00000332231.5|AP2A2|ENSG00000183020.9|adaptor-related protein complex 2, alpha 2 subunit
hg19_v2_chr3_+_11314099_11314122	0.0764322	UCCCUUU	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr6_-_8435706_8435756	0.0758621	UCCCUUU	ENST00000379660.4|SLC35B3|ENSG00000124786.8|solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
hg19_v2_chr10_+_18948311_18948417	0.0757902	UCCCUUU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr6_+_71276596_71276649	0.0720293	UCCCUUU	ENST00000370474.3|C6orf57|ENSG00000154079.5|chromosome 6 open reading frame 57
hg19_v2_chr1_+_154377669_154377699	0.071866	UCCCUUU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr6_-_8102714_8102811	0.0700049	UCCCUUU	ENST00000502429.1|EEF1E1|ENSG00000124802.7|eukaryotic translation elongation factor 1 epsilon 1 	ENST00000429723.2|EEF1E1|ENSG00000124802.7|eukaryotic translation elongation factor 1 epsilon 1 	ENST00000507463.1|EEF1E1|ENSG00000124802.7|eukaryotic translation elongation factor 1 epsilon 1 	ENST00000379715.5|EEF1E1|ENSG00000124802.7|eukaryotic translation elongation factor 1 epsilon 1
hg19_v2_chr13_-_42535214_42535259	0.0689069	UCCCUUU	ENST00000379310.3|VWA8|ENSG00000102763.11|von Willebrand factor A domain containing 8 	ENST00000281496.6|VWA8|ENSG00000102763.11|von Willebrand factor A domain containing 8
hg19_v2_chr3_+_5229356_5229367	0.0641796	UCCCUUU	ENST00000256497.4|EDEM1|ENSG00000134109.6|ER degradation enhancer, mannosidase alpha-like 1
hg19_v2_chr7_-_158622210_158622319	0.0637792	UCCCUUU	ENST00000251527.5|ESYT2|ENSG00000117868.11|extended synaptotagmin-like protein 2
hg19_v2_chr2_+_109335929_109336002	0.0624626	UCCCUUU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr1_-_9970227_9970356	0.0612751	UCCCUUU	ENST00000377263.1|CTNNBIP1|ENSG00000178585.10|catenin, beta interacting protein 1
hg19_v2_chr15_+_43477455_43477482	0.060172	UCCCUUU	ENST00000300213.4|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr12_+_66217911_66218018	0.0589793	UCCCUUU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr7_+_107220422_107220468	0.0582175	UCCCUUU	ENST00000005259.4|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr17_+_55162453_55162594	0.0561199	UCCCUUU	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr5_+_172261228_172261287	0.0556207	UCCCUUU	ENST00000393784.3|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chr13_-_21476900_21476949	0.0544192	UCCCUUU	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr1_+_64239657_64239724	0.0540116	UCCCUUU	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr9_-_27573392_27573451	0.048919	UCCCUUU	ENST00000380003.3|C9orf72|ENSG00000147894.10|chromosome 9 open reading frame 72
hg19_v2_chr17_+_61699766_61699826	0.0479965	UCCCUUU	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr7_-_129592700_129592828	0.0438405	UCCCUUU	ENST00000472396.1|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H 	ENST00000355621.3|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H
hg19_v2_chr3_+_61547585_61547585	0.0438079	UCCCUUU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr12_-_39299406_39299448	0.0430785	UCCCUUU	ENST00000331366.5|CPNE8|ENSG00000139117.9|copine VIII
hg19_v2_chr3_+_169940153_169940183	0.041517	UCCCUUU	ENST00000295797.4|PRKCI|ENSG00000163558.8|protein kinase C, iota
hg19_v2_chr10_+_111967345_111967442	0.041491	UCCCUUU	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_-_70671216_70671303	0.0409144	UCCCUUU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr6_+_152011628_152011642	0.0405646	UCCCUUU	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr8_-_42751820_42751874	0.0390159	UCCCUUU	ENST00000526349.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000527424.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000534961.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000319073.4|RNF170|ENSG00000120925.9|ring finger protein 170
hg19_v2_chr7_+_100797678_100797708	0.0387518	UCCCUUU	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr16_+_70148230_70148275	0.0385195	UCCCUUU	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr22_-_37099555_37099603	0.0384886	UCCCUUU	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chrX_-_24690771_24690794	0.0384667	UCCCUUU	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr2_+_208394616_208394655	0.037127	UCCCUUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr3_-_120068143_120068209	0.0369992	UCCCUUU	ENST00000295628.3|LRRC58|ENSG00000163428.3|leucine rich repeat containing 58
hg19_v2_chr5_+_96271141_96271168	0.0365697	UCCCUUU	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr22_-_29075853_29075853	0.0363096	UCCCUUU	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr1_+_107599267_107599340	0.0360437	UCCCUUU	ENST00000361318.5|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6 	ENST00000370078.1|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6
hg19_v2_chr9_+_33817461_33817565	0.0334803	UCCCUUU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr13_+_98605902_98605968	0.032546	UCCCUUU	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr1_-_70820357_70820435	0.0321481	UCCCUUU	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr7_-_32529973_32530030	0.0320738	UCCCUUU	ENST00000410044.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409987.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409782.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000450169.2|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr12_+_65563329_65563373	0.0318069	UCCCUUU	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr15_+_38544476_38544574	0.03098	UCCCUUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr16_-_73082274_73082274	0.0291293	UCCCUUU	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr4_+_99916765_99916776	0.0286568	UCCCUUU	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr10_+_69644404_69644427	0.0281655	UCCCUUU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr9_+_133454943_133455020	0.0279011	UCCCUUU	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr4_-_66536057_66536071	0.0269987	UCCCUUU	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr6_+_147830063_147830063	0.0267991	UCCCUUU	ENST00000367474.1|SAMD5|ENSG00000203727.3|sterile alpha motif domain containing 5
hg19_v2_chr11_+_111957497_111957623	0.0267942	UCCCUUU	ENST00000375549.3|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528182.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528048.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528021.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000526592.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000525291.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein
hg19_v2_chr5_-_39074479_39074515	0.0264839	UCCCUUU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr3_+_155588300_155588369	0.0258433	UCCCUUU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr16_-_19896220_19896239	0.0254657	UCCCUUU	ENST00000562469.1|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B 	ENST00000300571.2|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B
hg19_v2_chr19_-_14629224_14629262	0.0254275	UCCCUUU	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr5_+_122424816_122424944	0.0245466	UCCCUUU	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chr5_-_180288248_180288291	0.0242758	UCCCUUU	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr3_+_152017181_152017229	0.0237475	UCCCUUU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr1_+_147013182_147013329	0.0226533	UCCCUUU	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr17_+_28705921_28706000	0.0213718	UCCCUUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr3_+_88188254_88188254	0.0207297	UCCCUUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr7_-_105029329_105029376	0.0203303	UCCCUUU	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr12_-_49449107_49449107	0.0201247	UCCCUUU	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr1_+_21835858_21835926	0.0200565	UCCCUUU	ENST00000539907.1|ALPL|ENSG00000162551.9|alkaline phosphatase, liver/bone/kidney 	ENST00000540617.1|ALPL|ENSG00000162551.9|alkaline phosphatase, liver/bone/kidney 	ENST00000374840.3|ALPL|ENSG00000162551.9|alkaline phosphatase, liver/bone/kidney
hg19_v2_chr17_+_7608511_7608538	0.0193354	UCCCUUU	ENST00000226091.2|EFNB3|ENSG00000108947.4|ephrin-B3
hg19_v2_chr10_+_20105157_20105184	0.0185	UCCCUUU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr4_+_78978724_78978764	0.0174594	UCCCUUU	ENST00000325942.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1 	ENST00000264895.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1 	ENST00000264899.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1
hg19_v2_chr13_+_98794810_98794826	0.0170005	UCCCUUU	ENST00000595437.1|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr15_-_34628951_34629045	0.0164611	UCCCUUU	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr2_-_172017343_172017391	0.0158652	UCCCUUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr18_-_60987220_60987386	0.0157513	UCCCUUU	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_+_21593972_21594071	0.0156712	UCCCUUU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr2_-_219157250_219157309	0.0153795	UCCCUUU	ENST00000434015.2|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000444183.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000420341.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000453281.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000258412.3|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000440422.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1
hg19_v2_chr2_-_200322723_200322819	0.0145668	UCCCUUU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr12_+_52203789_52203789	0.0141006	UCCCUUU	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr10_+_72164135_72164135	0.0131265	UCCCUUU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr1_+_38259540_38259569	0.0130413	UCCCUUU	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr4_-_140098339_140098392	0.0125428	UCCCUUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr10_+_99344104_99344152	0.012039	UCCCUUU	ENST00000555577.1|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha 	ENST00000370649.3|PI4K2A|ENSG00000249967.1|Phosphatidylinositol 4-kinase type 2-alpha; Uncharacterized protein
hg19_v2_chr13_-_28674693_28674747	0.0112489	UCCCUUU	ENST00000537084.1|FLT3|ENSG00000122025.10|fms-related tyrosine kinase 3 	ENST00000241453.7|FLT3|ENSG00000122025.10|fms-related tyrosine kinase 3 	ENST00000380982.4|FLT3|ENSG00000122025.10|fms-related tyrosine kinase 3
hg19_v2_chr11_+_34073195_34073266	0.0111907	UCCCUUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr1_+_36348790_36348822	0.0110093	UCCCUUU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr9_+_4985228_4985245	0.00912468	UCCCUUU	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr2_-_2334888_2335053	0.00830148	UCCCUUU	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr13_+_50571155_50571229	0.00824396	UCCCUUU	ENST00000420995.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000378182.3|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000356017.4|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000457662.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr4_-_176923483_176923514	0.00790987	UCCCUUU	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr3_+_132136331_132136378	0.0075477	UCCCUUU	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr10_+_60144782_60144887	0.0074072	UCCCUUU	ENST00000487519.1|TFAM|ENSG00000108064.6|transcription factor A, mitochondrial
hg19_v2_chr12_+_62860581_62860629	0.00720656	UCCCUUU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr13_-_45915221_45915347	0.00691296	UCCCUUU	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr7_+_138916231_138916231	0.00622397	UCCCUUU	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr12_+_110437328_110437358	0.00555506	UCCCUUU	ENST00000261739.4|ANKRD13A|ENSG00000076513.12|ankyrin repeat domain 13A
hg19_v2_chr2_-_85555385_85555548	0.00553692	UCCCUUU	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr5_-_131132614_131132648	0.00519259	UCCCUUU	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chrX_-_15872914_15873054	0.00503682	UCCCUUU	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr1_-_156051789_156051838	0.00432419	UCCCUUU	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr2_-_73053126_73053184	0.00402516	UCCCUUU	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr12_+_123868320_123868320	0.00401063	UCCCUUU	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chrX_-_135056216_135056227	0.00203941	UCCCUUU	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr19_+_36486078_36486123	0.00194673	UCCCUUU	ENST00000378887.2|SDHAF1|ENSG00000205138.2|succinate dehydrogenase complex assembly factor 1
hg19_v2_chr20_-_44600810_44600853	0.00159685	UCCCUUU	ENST00000322927.2|ZNF335|ENSG00000198026.6|zinc finger protein 335 	ENST00000426788.1|ZNF335|ENSG00000198026.6|zinc finger protein 335
hg19_v2_chr10_+_12171721_12171732	0.00145963	UCCCUUU	ENST00000379020.4|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae) 	ENST00000379017.3|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae)
hg19_v2_chr15_+_52121822_52121833	5.44614e-05	UCCCUUU	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
