Motif ID: CCAGCAU

Z-value: 0.418


Mature miRNA associated with seed CCAGCAU:

NamemiRBase Accession
hsa-miR-338-3p MIMAT0000763



Activity profile for motif CCAGCAU.

activity profile for motif CCAGCAU


Sorted Z-values histogram for motif CCAGCAU

Sorted Z-values for motif CCAGCAU



Network of associatons between targets according to the STRING database.



First level regulatory network of CCAGCAU

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr3_+_238274 1.086 NM_001253387
NM_006614
CHL1

cell adhesion molecule with homology to L1CAM (close homolog of L1)

chr4_-_149363498 1.003 NM_000901
NM_001166104
NR3C2

nuclear receptor subfamily 3, group C, member 2

chr2_+_10861740 0.735 NM_001039362
NM_144583
ATP6V1C2

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2

chr1_+_78956727 0.539 NM_000959
NM_001039585
PTGFR

prostaglandin F receptor (FP)

chr2_+_120189342 0.493 NM_183240
TMEM37
transmembrane protein 37
chr1_+_61542928 0.416 NM_001145511
NFIA
nuclear factor I/A
chr20_+_51588945 0.403 NM_173485
TSHZ2
teashirt zinc finger homeobox 2
chr1_+_61547625 0.400 NM_001134673
NM_005595
NFIA

nuclear factor I/A

chr20_+_51801821 0.384 NM_001193421
TSHZ2
teashirt zinc finger homeobox 2
chr7_-_131241321 0.381 NM_001018111
NM_005397
PODXL

podocalyxin-like

chr10_-_123356158 0.374 NM_001144915
FGFR2
fibroblast growth factor receptor 2
chr16_-_67427335 0.364 NM_015964
NM_016140
TPPP3

tubulin polymerization-promoting protein family member 3

chr1_+_244214552 0.349 NM_205768
ZNF238
zinc finger protein 238
chr1_+_111889194 0.346 NM_181643
C1orf88
chromosome 1 open reading frame 88
chr11_+_76777926 0.337 NM_004055
CAPN5
calpain 5
chr10_-_123353771 0.336 NM_001144916
FGFR2
fibroblast growth factor receptor 2
chr8_-_143858436 0.319 NM_177476
NM_177477
LYNX1

Ly6/neurotoxin 1

chr1_+_61547388 0.319 NM_001145512
NFIA
nuclear factor I/A
chr6_-_39197225 0.312 NM_003740
KCNK5
potassium channel, subfamily K, member 5
chr1_-_22469414 0.301 NM_030761
WNT4
wingless-type MMTV integration site family, member 4
chr1_+_244216506 0.299 NM_006352
ZNF238
zinc finger protein 238
chr3_+_186739643 0.288 NM_003032
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr7_-_25164902 0.283 NM_018947
CYCS
cytochrome c, somatic
chr3_+_186648273 0.276 NM_173216
NM_173217
ST6GAL1

ST6 beta-galactosamide alpha-2,6-sialyltranferase 1

chr7_-_51384458 0.276 NM_015198
COBL
cordon-bleu homolog (mouse)
chr1_+_162351519 0.254 NM_001085375
C1orf226
chromosome 1 open reading frame 226
chr10_+_85933553 0.252 NM_207373
C10orf99
chromosome 10 open reading frame 99
chr20_+_37434294 0.249 NM_001172735
NM_015568
PPP1R16B

protein phosphatase 1, regulatory subunit 16B

chr6_+_24495166 0.235 NM_001080
NM_170740
ALDH5A1

aldehyde dehydrogenase 5 family, member A1

chr11_-_17410863 0.233 NM_001166290
KCNJ11
potassium inwardly-rectifying channel, subfamily J, member 11
chr4_-_84030995 0.229 NM_001130716
PLAC8
placenta-specific 8
chr16_-_75590107 0.225 NM_001077416
NM_001077418
NM_001077419
TMEM231


transmembrane protein 231


chr5_+_156693051 0.217 NM_001037333
NM_001037332
CYFIP2

cytoplasmic FMR1 interacting protein 2

chr1_+_161228516 0.214 NM_001102566
PCP4L1
Purkinje cell protein 4 like 1
chr2_+_26624776 0.214 NM_145038
CCDC164
coiled-coil domain containing 164
chr6_+_151815174 0.209 NM_025059
C6orf97
chromosome 6 open reading frame 97
chr16_+_5008317 0.206 NM_014692
SEC14L5
SEC14-like 5 (S. cerevisiae)
chr10_+_69869249 0.203 NM_032578
MYPN
myopalladin
chr11_-_17410205 0.203 NM_000525
KCNJ11
potassium inwardly-rectifying channel, subfamily J, member 11
chr5_+_156696351 0.202 NM_014376
CYFIP2
cytoplasmic FMR1 interacting protein 2
chr10_-_123357503 0.197 NM_000141
NM_001144917
NM_001144918
NM_001144919
NM_022970
FGFR2




fibroblast growth factor receptor 2




chr14_-_67982020 0.190 NM_182526
TMEM229B
transmembrane protein 229B
chr14_-_95786095 0.187 NM_024734
CLMN
calmin (calponin-like, transmembrane)
chr9_-_130742803 0.184 NM_001035254
FAM102A
family with sequence similarity 102, member A
chr1_-_75139421 0.183 NM_001002912
C1orf173
chromosome 1 open reading frame 173
chr16_-_75528925 0.182 NM_021615
CHST6
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
chr11_+_100557851 0.179 NM_152432
ARHGAP42
Rho GTPase activating protein 42
chr4_+_55523906 0.179 NM_000222
NM_001093772
KIT

v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog

chr3_-_13008959 0.177 NM_014869
IQSEC1
IQ motif and Sec7 domain 1
chr10_-_73533196 0.177 NM_022153
C10orf54
chromosome 10 open reading frame 54
chr1_+_171454636 0.177 NM_015172
PRRC2C
proline-rich coiled-coil 2C
chr8_+_17354562 0.165 NM_001008539
SLC7A2
solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr2_+_7057471 0.165 NM_014746
RNF144A
ring finger protein 144A
chr10_-_1779669 0.163 NM_018702
ADARB2
adenosine deaminase, RNA-specific, B2
chr9_-_130712866 0.163 NM_203305
FAM102A
family with sequence similarity 102, member A
chr5_+_43602738 0.161 NM_012343
NNT
nicotinamide nucleotide transhydrogenase
chr22_+_23487512 0.160 NM_004914
RAB36
RAB36, member RAS oncogene family
chr10_-_123353330 0.157 NM_001144913
NM_001144914
FGFR2

fibroblast growth factor receptor 2

chr1_+_87794150 0.156 NM_006769
LMO4
LIM domain only 4
chrX_+_49126299 0.154 NM_001184745
NM_033215
PPP1R3F

protein phosphatase 1, regulatory subunit 3F

chr4_+_72052354 0.154 NM_001098484
NM_001134742
SLC4A4

solute carrier family 4, sodium bicarbonate cotransporter, member 4

chr6_+_150690027 0.150 NM_001164694
NM_001164695
NM_203395
IYD


iodotyrosine deiodinase


chr1_-_227505796 0.150 NM_003607
NM_014826
CDC42BPA

CDC42 binding protein kinase alpha (DMPK-like)

chr2_-_238499713 0.149 NM_022449
RAB17
RAB17, member RAS oncogene family
chr20_-_33460558 0.148 NM_178026
GGT7
gamma-glutamyltransferase 7
chr9_+_136325086 0.147 NM_001135775
NM_001242369
NM_001242370
NM_017586
C9orf7



chromosome 9 open reading frame 7



chrX_-_8700170 0.145 NM_000216
KAL1
Kallmann syndrome 1 sequence
chr5_+_121465214 0.141 NM_207317
ZNF474
zinc finger protein 474
chr5_+_43603216 0.141 NM_182977
NNT
nicotinamide nucleotide transhydrogenase
chr6_-_20212628 0.137 NM_001080480
MBOAT1
membrane bound O-acyltransferase domain containing 1
chr9_-_4300028 0.137 NM_001042413
GLIS3
GLIS family zinc finger 3
chrX_-_112066353 0.136 NM_001113490
AMOT
angiomotin
chr7_-_156803224 0.136 NM_005515
MNX1
motor neuron and pancreas homeobox 1
chr7_+_23636970 0.136 NM_138771
CCDC126
coiled-coil domain containing 126
chr14_+_103243813 0.136 NM_001199427
NM_003300
NM_145725
NM_145726
TRAF3



TNF receptor-associated factor 3



chr7_+_105603656 0.134 NM_152750
CDHR3
cadherin-related family member 3
chr4_+_77356252 0.134 NM_020859
SHROOM3
shroom family member 3
chr11_+_71791376 0.134 NM_001145307
NM_001145308
NM_001205138
NM_145309
LRTOMT



leucine rich transmembrane and 0-methyltransferase domain containing



chr12_-_113772900 0.133 NM_024959
SLC24A6
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
chr3_-_13114547 0.131 NM_001134382
IQSEC1
IQ motif and Sec7 domain 1
chr20_-_41818464 0.130 NM_007050
NM_133170
PTPRT

protein tyrosine phosphatase, receptor type, T

chr19_-_6110561 0.129 NM_000635
NM_134433
RFX2

regulatory factor X, 2 (influences HLA class II expression)

chr8_+_17396285 0.129 NM_001164771
NM_003046
SLC7A2

solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

chr14_+_75894919 0.129 NM_001135048
NM_130469
JDP2

Jun dimerization protein 2

chr17_+_68071386 0.128 NM_018658
NM_170741
KCNJ16

potassium inwardly-rectifying channel, subfamily J, member 16

chr11_-_2292181 0.128 NM_005170
ASCL2
achaete-scute complex homolog 2 (Drosophila)
chr9_+_97136817 0.127 NM_032558
HIATL1
hippocampus abundant transcript-like 1
chr12_-_49449106 0.127 NM_003482
MLL2
myeloid/lymphoid or mixed-lineage leukemia 2
chr8_-_143859638 0.127 NM_023946
NM_177457
LYNX1

Ly6/neurotoxin 1

chr9_-_4152182 0.126 NM_152629
GLIS3
GLIS family zinc finger 3
chr17_+_68100994 0.126 NM_170742
KCNJ16
potassium inwardly-rectifying channel, subfamily J, member 16
chr8_+_144329105 0.125 NM_173832
ZFP41
zinc finger protein 41 homolog (mouse)
chr17_+_12692779 0.124 NM_014859
ARHGAP44
Rho GTPase activating protein 44
chr12_-_57400199 0.123 NM_014830
ZBTB39
zinc finger and BTB domain containing 39
chr4_+_52917440 0.122 NM_145263
SPATA18
spermatogenesis associated 18 homolog (rat)
chr1_-_154531083 0.120 NM_017582
UBE2Q1
ubiquitin-conjugating enzyme E2Q family member 1
chr14_-_94855120 0.120 NM_000295
SERPINA1
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
chr7_-_156801980 0.120 NM_001165255
MNX1
motor neuron and pancreas homeobox 1
chr8_-_17555158 0.119 NM_020749
MTUS1
microtubule associated tumor suppressor 1
chr14_-_94856926 0.118 NM_001002235
NM_001002236
NM_001127700
NM_001127701
NM_001127702
NM_001127703
NM_001127704
NM_001127705
NM_001127706
NM_001127707
SERPINA1









serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1









chr8_-_140715234 0.117 NM_016601
KCNK9
potassium channel, subfamily K, member 9
chr8_-_17580024 0.116 NM_001166393
MTUS1
microtubule associated tumor suppressor 1
chr11_-_129062092 0.116 NM_001142685
ARHGAP32
Rho GTPase activating protein 32
chr8_-_17579729 0.116 NM_001001931
MTUS1
microtubule associated tumor suppressor 1
chr11_-_34937831 0.115 NM_015957
APIP
APAF1 interacting protein
chr7_+_145813452 0.115 NM_014141
CNTNAP2
contactin associated protein-like 2
chr19_+_32897021 0.114 NM_207325
DPY19L3
dpy-19-like 3 (C. elegans)
chr19_-_460995 0.114 NM_012435
SHC2
SHC (Src homology 2 domain containing) transforming protein 2
chr3_+_160473995 0.112 NM_139245
PPM1L
protein phosphatase, Mg2+/Mn2+ dependent, 1L
chr17_-_27621163 0.112 NM_020772
NUFIP2
nuclear fragile X mental retardation protein interacting protein 2
chr6_+_39760148 0.112 NM_001201427
DAAM2
dishevelled associated activator of morphogenesis 2
chr19_+_32896515 0.110 NM_001172774
DPY19L3
dpy-19-like 3 (C. elegans)
chr15_+_75287829 0.109 NM_001178111
NM_001178112
NM_138967
SCAMP5


secretory carrier membrane protein 5


chr14_+_56584854 0.108 NM_021255
PELI2
pellino homolog 2 (Drosophila)
chr2_-_128100673 0.107 NM_006609
MAP3K2
mitogen-activated protein kinase kinase kinase 2
chr9_-_37465384 0.107 NM_014872
ZBTB5
zinc finger and BTB domain containing 5
chr10_-_104211244 0.107 NM_024886
C10orf95
chromosome 10 open reading frame 95
chr20_+_36531498 0.106 NM_080607
VSTM2L
V-set and transmembrane domain containing 2 like
chr7_+_98476084 0.104 NM_001244580
NM_003496
TRRAP

transformation/transcription domain-associated protein

chr6_-_10838712 0.104 NM_001242385
NM_001242957
NM_005906
MAK


male germ cell-associated kinase


chr20_-_50384899 0.103 NM_006045
ATP9A
ATPase, class II, type 9A
chr2_-_120980971 0.102 NM_024121
TMEM185B
transmembrane protein 185B
chr7_+_149535508 0.101 NM_001099220
ZNF862
zinc finger protein 862
chr5_+_149109814 0.101 NM_001172698
NM_133263
PPARGC1B

peroxisome proliferator-activated receptor gamma, coactivator 1 beta

chr8_-_121824287 0.101 NM_021021
SNTB1
syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
chr5_-_88199868 0.101 NM_001131005
NM_001193347
MEF2C

myocyte enhancer factor 2C

chr8_-_17658385 0.100 NM_001001924
NM_001001925
MTUS1

microtubule associated tumor suppressor 1

chr16_-_12897693 0.100 NM_001099455
NM_018340
CPPED1

calcineurin-like phosphoesterase domain containing 1

chr7_+_100728719 0.099 NM_030961
TRIM56
tripartite motif containing 56
chr22_-_44258210 0.098 NM_014351
SULT4A1
sulfotransferase family 4A, member 1
chr5_-_88179278 0.098 NM_001193350
NM_002397
MEF2C

myocyte enhancer factor 2C

chr3_+_13521714 0.098 NM_024827
NM_001136041
HDAC11

histone deacetylase 11

chr1_-_226128872 0.097 NM_001172425
NM_003240
LEFTY2

left-right determination factor 2

chr15_-_68498373 0.096 NM_001031733
NM_033429
CALML4

calmodulin-like 4

chr2_-_148779172 0.096 NM_181742
ORC4
origin recognition complex, subunit 4
chr6_+_39760772 0.095 NM_015345
DAAM2
dishevelled associated activator of morphogenesis 2
chr5_+_140787769 0.095 NM_018926
NM_032100
PCDHGB6

protocadherin gamma subfamily B, 6

chr15_+_43809805 0.095 NM_002373
MAP1A
microtubule-associated protein 1A
chr11_-_30038487 0.095 NM_002233
KCNA4
potassium voltage-gated channel, shaker-related subfamily, member 4
chr1_+_164528586 0.095 NM_001204961
NM_001204963
NM_002585
PBX1


pre-B-cell leukemia homeobox 1


chr15_-_72490109 0.095 NM_001012642
GRAMD2
GRAM domain containing 2
chr5_+_149151502 0.094 NM_001172699
PPARGC1B
peroxisome proliferator-activated receptor gamma, coactivator 1 beta
chrX_-_112084006 0.094 NM_133265
AMOT
angiomotin
chr9_+_140100109 0.093 NM_001144026
NM_001144027
NM_001144028
NM_014434
NDOR1



NADPH dependent diflavin oxidoreductase 1



chr16_+_78056411 0.092 NM_005752
CLEC3A
C-type lectin domain family 3, member A
chr22_+_35777051 0.092 NM_002133
HMOX1
heme oxygenase (decycling) 1
chr7_+_114055048 0.091 NM_001172766
NM_014491
NM_148898
NM_148900
FOXP2



forkhead box P2



chr7_+_30960914 0.091 NM_001185060
NM_001185061
NM_001185062
AQP1


aquaporin 1 (Colton blood group)


chr7_-_95225802 0.090 NM_002612
PDK4
pyruvate dehydrogenase kinase, isozyme 4
chr11_-_33744497 0.090 NM_001127227
CD59
CD59 molecule, complement regulatory protein
chr11_-_111250156 0.089 NM_006235
POU2AF1
POU class 2 associating factor 1
chr3_-_44519156 0.089 NM_181489
ZNF445
zinc finger protein 445
chr2_+_86333304 0.089 NM_017952
PTCD3
Pentatricopeptide repeat domain 3
chr14_+_75898836 0.088 NM_001135049
JDP2
Jun dimerization protein 2
chr12_+_50451486 0.087 NM_001095
NM_020039
ACCN2

amiloride-sensitive cation channel 2, neuronal

chrX_-_53310748 0.086 NM_001243197
NM_015075
IQSEC2

IQ motif and Sec7 domain 2

chr11_+_45907046 0.085 NM_005456
MAPK8IP1
mitogen-activated protein kinase 8 interacting protein 1
chr6_+_158957467 0.085 NM_020823
TMEM181
transmembrane protein 181
chr3_-_47324255 0.084 NM_001134878
NM_022342
NM_182902
KIF9


kinesin family member 9


chr2_-_229046313 0.084 NM_001142644
NM_030623
SPHKAP

SPHK1 interactor, AKAP domain containing

chr1_-_205091137 0.083 NM_001193272
NM_001193273
NM_005057
RBBP5


retinoblastoma binding protein 5


chr6_-_143266283 0.083 NM_006734
HIVEP2
human immunodeficiency virus type I enhancer binding protein 2
chr11_-_33744272 0.083 NM_001127223
NM_001127225
NM_001127226
CD59


CD59 molecule, complement regulatory protein


chr18_-_53255734 0.083 NM_001083962
NM_001243230
NM_003199
TCF4


transcription factor 4


chr1_+_201979689 0.083 NM_001114309
NM_004433
ELF3

E74-like factor 3 (ets domain transcription factor, epithelial-specific )

chr17_-_15902907 0.082 NM_001042697
NM_001042698
ZSWIM7

zinc finger, SWIM-type containing 7

chr19_+_4639526 0.082 NM_152362
TNFAIP8L1
tumor necrosis factor, alpha-induced protein 8-like 1
chr6_+_47624222 0.082 NM_153839
GPR111
G protein-coupled receptor 111
chr4_-_146100793 0.082 NM_001102653
OTUD4
OTU domain containing 4
chr13_-_110438896 0.081 NM_003749
IRS2
insulin receptor substrate 2
chr11_-_44972227 0.081 NM_001076787
NM_006034
TP53I11

tumor protein p53 inducible protein 11

chr18_+_55888750 0.081 NM_001144966
NEDD4L
neural precursor cell expressed, developmentally down-regulated 4-like
chr1_+_167189948 0.080 NM_001198786
NM_002697
POU2F1

POU class 2 homeobox 1

chr11_-_105892908 0.080 NM_032424
KIAA1826
KIAA1826
chr13_+_113623496 0.080 NM_001112732
MCF2L
MCF.2 cell line derived transforming sequence-like
chr8_-_143751389 0.079 NM_001077527
NM_003724
JRK

jerky homolog (mouse)

chr8_+_144295067 0.079 NM_178172
GPIHBP1
glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
chr1_+_11714431 0.079 NM_183412
FBXO44
F-box protein 44
chr7_+_140774031 0.079 NM_001195278
LOC100507421
transmembrane protein 178-like
chr7_+_66093854 0.078 NM_001167961
NM_153033
KCTD7

potassium channel tetramerisation domain containing 7

chr1_+_65886130 0.078 NM_001198683
NM_017526
LEPROT

leptin receptor overlapping transcript

chr5_+_140864626 0.078 NM_018928
NM_032406
PCDHGC4

protocadherin gamma subfamily C, 4

chr16_+_23568833 0.078 NM_019116
UBFD1
ubiquitin family domain containing 1
chr19_+_4640028 0.077 NM_001167942
TNFAIP8L1
tumor necrosis factor, alpha-induced protein 8-like 1
chr9_-_126030854 0.077 NM_001171137
STRBP
spermatid perinuclear RNA binding protein
chr1_-_202679415 0.077 NM_177402
SYT2
synaptotagmin II
chr19_+_54024176 0.077 NM_018555
ZNF331
zinc finger protein 331
chr14_+_75894508 0.076 NM_001135047
JDP2
Jun dimerization protein 2
chr2_-_148778262 0.075 NM_001190882
NM_001190879
NM_002552
NM_001190881
NM_181741
ORC4




origin recognition complex, subunit 4




chr7_+_128828712 0.075 NM_005631
SMO
smoothened, frizzled family receptor
chr14_-_100772774 0.075 NM_001039355
SLC25A29
solute carrier family 25, member 29
chr5_+_140868721 0.075 NM_018929
NM_032407
PCDHGC5

protocadherin gamma subfamily C, 5

chr1_-_89591685 0.075 NM_004120
GBP2
guanylate binding protein 2, interferon-inducible
chr13_+_113656027 0.075 NM_024979
MCF2L
MCF.2 cell line derived transforming sequence-like
chr6_-_76203256 0.074 NM_015687
FILIP1
filamin A interacting protein 1
chr14_-_92302612 0.074 NM_001128595
NM_152332
TC2N

tandem C2 domains, nuclear

chr14_-_89020888 0.074 NM_007039
PTPN21
protein tyrosine phosphatase, non-receptor type 21
chr6_+_147525493 0.074 NM_001127715
NM_139244
STXBP5

syntaxin binding protein 5 (tomosyn)

chr16_-_755718 0.074 NM_153350
FBXL16
F-box and leucine-rich repeat protein 16
chr1_+_225997742 0.074 NM_001136018
EPHX1
epoxide hydrolase 1, microsomal (xenobiotic)

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
2.35 8.36e-03 GO:0015672 monovalent inorganic cation transport
2.08 8.54e-03 GO:0030001 metal ion transport
2.09 1.65e-02 GO:0060548 negative regulation of cell death
1.18 2.41e-02 GO:0065007 biological regulation
3.05 3.10e-02 GO:0007156 homophilic cell adhesion
2.05 4.38e-02 GO:0043069 negative regulation of programmed cell death

Nothing significant found in compartment category.

Gene overrepresentation in function category:

enrichment   p-value GO term description
2.70 4.65e-03 GO:0005244 voltage-gated ion channel activity
2.70 4.65e-03 GO:0022832 voltage-gated channel activity
1.44 5.75e-03 GO:0008270 zinc ion binding
1.29 6.72e-03 GO:0046872 metal ion binding
1.29 7.06e-03 GO:0043169 cation binding
1.28 8.36e-03 GO:0043167 ion binding
1.88 9.98e-03 GO:0008324 cation transmembrane transporter activity
1.38 1.78e-02 GO:0046914 transition metal ion binding
6.69 2.33e-02 GO:0015491 cation:cation antiporter activity
2.23 3.13e-02 GO:0005261 cation channel activity
3.77 3.21e-02 GO:0015297 antiporter activity
3.99 3.72e-02 GO:0015300 solute:solute antiporter activity
5.26 4.60e-02 GO:0015298 solute:cation antiporter activity