hg19_v1_chr1_-_153029987_153029987	12.999	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg19_v1_chr1_-_153044083_153044083	9.08947	SOX2.p2	NM_001017418|SPRR2B|6701|small proline-rich protein 2B
hg19_v1_chr1_+_171154387_171154457	7.78579	SOX2.p2	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)
hg19_v1_chr1_+_84647342_84647342	7.16637	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr2_-_161056762_161056829	6.28306	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg19_v1_chr1_-_153085963_153085988	5.12752	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg19_v1_chr2_+_102508333_102508351	4.99563	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr2_-_26205437_26205444	4.92421	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr7_+_26400503_26400554	4.87153	SOX2.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chr7_-_41742666_41742705	4.81041	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg19_v1_chr1_-_153013593_153013594	4.74399	SOX2.p2	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg19_v1_chr7_+_134464417_134464428	4.73352	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg19_v1_chr7_-_83824216_83824429	4.35702	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v1_chr2_-_26205327_26205367	4.34488	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr8_-_124553253_124553447	3.90362	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32
hg19_v1_chr2_+_102314162_102314542	3.8935	SOX2.p2	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr12_-_67072881_67072924	3.88927	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr6_+_114178516_114178953	3.77811	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr8_+_32504250_32504250	3.65136	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg19_v1_chr7_+_134464372_134464407	3.53443	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr11_-_16424391_16424412	3.51641	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr8_+_124194751_124194829	3.51466	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr15_-_34610928_34611028	3.50943	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg19_v1_chr7_-_107643330_107643880	3.48936	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr2_+_102508377_102508687	3.47248	SOX2.p2	BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chrX_+_100805415_100805588	3.409	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr14_+_85996454_85996493	3.40495	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr2_-_72374919_72374965	3.37746	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v1_chr6_-_30655671_30655671	3.36294	SOX2.p2	AK124880|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_133471|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr8_-_7274353_7274353	3.25859	SOX2.p2	NM_001205266|DEFB4B|100289462|defensin, beta 4B
hg19_v1_chr14_-_57272344_57272383	3.22212	SOX2.p2	NM_172337|OTX2|5015|orthodenticle homeobox 2	AB593056|OTX2|5015|orthodenticle homeobox 2
hg19_v1_chr2_+_210444364_210444424	3.21119	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr1_+_151032880_151032893	3.2026	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr12_+_53491417_53491438	3.19547	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr1_-_26233367_26233367	3.18381	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chr15_-_74494780_74494825	3.16853	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr22_+_31477231_31477334	3.1675	SOX2.p2	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg19_v1_chr1_+_151032866_151032873	3.16051	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr2_-_161056573_161056601	3.15724	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg19_v1_chr6_+_100054649_100054649	3.12906	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg19_v1_chr15_-_74495093_74495219	3.12378	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr6_+_130339715_130339735	3.11935	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg19_v1_chr10_+_102732285_102732285	3.09581	SOX2.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr5_+_137514416_137514416	3.08636	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr8_+_54764367_54764459	3.01379	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr15_-_74494851_74494866	3.00576	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr8_+_7752198_7752211	2.98568	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg19_v1_chr1_+_151032683_151032861	2.97557	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr5_+_137514753_137514878	2.96354	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr2_-_31352489_31352505	2.92133	SOX2.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr7_+_5632435_5632441	2.90935	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr12_+_53491448_53491506	2.90731	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr2_+_33359607_33359804	2.89953	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg19_v1_chrX_+_135251454_135251454	2.86562	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr12_-_95611023_95611450	2.8654	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg19_v1_chr7_+_5632453_5632567	2.81656	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chrX_+_135251795_135251795	2.80185	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr18_+_29027731_29027757	2.80129	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr4_+_110749149_110749158	2.79103	SOX2.p2	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg19_v1_chr17_-_49124128_49124328	2.77715	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr1_+_87012758_87012925	2.77695	SOX2.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	HQ258531|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg19_v1_chr8_-_29206321_29206321	2.70798	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg19_v1_chr17_+_16945766_16946162	2.70386	SOX2.p2	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg19_v1_chr2_+_169923531_169923719	2.6704	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg19_v1_chr10_+_105005643_105005704	2.64617	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg19_v1_chr21_-_32931289_32931427	2.6428	SOX2.p2	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg19_v1_chr2_-_208031570_208031680	2.56895	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg19_v1_chr5_-_39203061_39203174	2.56093	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg19_v1_chr10_-_105845619_105845640	2.52659	SOX2.p2	BC004478|COL17A1|1308|collagen, type XVII, alpha 1	D63465|COL17A1|1308|collagen, type XVII, alpha 1	NM_000494|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr10_+_97759847_97759882	2.47976	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg19_v1_chr3_-_139258373_139258472	2.40956	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr3_-_139258477_139258489	2.39674	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr2_-_113594325_113594364	2.37799	SOX2.p2	X56087|IL1B|3553|interleukin 1, beta	X02532|IL1B|3553|interleukin 1, beta	K02770|IL1B|3553|interleukin 1, beta	M54933|IL1B|3553|interleukin 1, beta	AK313983|IL1B|3553|interleukin 1, beta	BC008678|IL1B|3553|interleukin 1, beta	M15330|IL1B|3553|interleukin 1, beta	NM_000576|IL1B|3553|interleukin 1, beta
hg19_v1_chr4_-_47983430_47983549	2.37096	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr1_-_17308072_17308080	2.37049	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr10_+_17271302_17271316	2.34762	SOX2.p2	Z19554|VIM|7431|vimentin
hg19_v1_chr8_+_124194873_124195093	2.34022	SOX2.p2	BC007828|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr10_-_105845556_105845583	2.31216	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr2_-_31637598_31637624	2.26159	SOX2.p2	NM_000379|XDH|7498|xanthine dehydrogenase
hg19_v1_chr10_+_17271276_17271276	2.25797	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg19_v1_chr2_+_10262694_10262824	2.23363	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr18_-_29340698_29340842	2.23243	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg19_v1_chr10_+_17271277_17271297	2.21541	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg19_v1_chr4_+_54966197_54966247	2.19378	SOX2.p2	AB028838|GSX2|170825|GS homeobox 2	EU596451|GSX2|170825|GS homeobox 2	NM_133267|GSX2|170825|GS homeobox 2
hg19_v1_chr14_+_23305816_23305857	2.17496	SOX2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr20_+_30326903_30327171	2.14038	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg19_v1_chr10_+_17270469_17270604	2.10852	SOX2.p2	BC066956|VIM|7431|vimentin
hg19_v1_chr6_-_131291480_131291622	2.09376	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr4_-_139163222_139163506	2.08922	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr12_-_122240827_122240888	2.06716	SOX2.p2	
hg19_v1_chr5_-_157002739_157002871	2.03081	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg19_v1_chr3_+_172472246_172472359	2.02811	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr4_-_57547845_57547871	2.02732	SOX2.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chrX_-_107682600_107682726	2.02323	SOX2.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr2_+_10262853_10262925	1.99991	SOX2.p2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr14_+_23305792_23305808	1.9933	SOX2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr10_+_102106771_102106912	1.98835	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chr2_+_62934030_62934031	1.96952	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg19_v1_chr18_+_56530677_56531034	1.95774	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr3_+_39509069_39509170	1.95506	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg19_v1_chr4_-_20985547_20985711	1.95448	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr2_+_228678556_228678627	1.94233	SOX2.p2	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg19_v1_chr14_+_32798478_32798595	1.93904	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg19_v1_chrX_+_123234462_123234598	1.9359	SOX2.p2	AK026678|STAG2|10735|stromal antigen 2
hg19_v1_chr14_-_94423766_94423766	1.92465	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg19_v1_chr11_-_64647136_64647186	1.92373	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg19_v1_chr20_-_56284945_56285033	1.92013	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg19_v1_chr7_+_18535351_18535448	1.91836	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_001204145|HDAC9|9734|histone deacetylase 9	NM_001204146|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg19_v1_chr13_-_25745620_25745701	1.91816	SOX2.p2	AK098343|FAM123A|219287|family with sequence similarity 123A	BC032653|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chrX_+_135229536_135229731	1.91339	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr7_+_18548899_18548948	1.9035	SOX2.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr7_+_139528951_139529234	1.90039	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg19_v1_chr14_-_65409445_65409586	1.87231	SOX2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg19_v1_chr7_-_148581297_148581358	1.85686	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chrX_-_153599581_153599650	1.84495	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg19_v1_chr10_+_54074037_54074194	1.84332	SOX2.p2	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)
hg19_v1_chr1_-_6479880_6479980	1.84239	SOX2.p2	BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)	AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)	NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)
hg19_v1_chr15_-_70390226_70390228	1.84216	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr7_+_106505696_106505731	1.82701	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr2_-_165424993_165425016	1.82426	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg19_v1_chr11_+_125496123_125496336	1.82077	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chr3_+_19189969_19190040	1.82056	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg19_v1_chr11_-_61584228_61584375	1.81222	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr3_-_123339178_123339390	1.80807	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr16_-_75529278_75529281	1.80487	SOX2.p2	
hg19_v1_chr5_+_126112847_126112918	1.79518	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg19_v1_chr2_-_2334887_2335044	1.78129	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr2_+_208576446_208576555	1.77309	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr5_+_31193761_31193832	1.76209	SOX2.p2	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr9_+_27109138_27109146	1.75852	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg19_v1_chr14_-_73493744_73493919	1.75717	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg19_v1_chr2_+_75061234_75061287	1.74981	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg19_v1_chr1_+_90098643_90098648	1.74925	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr12_-_28124915_28124915	1.74779	SOX2.p2	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr3_-_149095458_149095486	1.74602	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr4_-_69111333_69111411	1.7397	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg19_v1_chr9_-_72287097_72287311	1.73381	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v1_chr11_+_129991582_129991674	1.73367	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr5_-_16936290_16936367	1.73185	SOX2.p2	BC050682|MYO10|4651|myosin X	BC041694|MYO10|4651|myosin X	BC108736|MYO10|4651|myosin X	BC032669|MYO10|4651|myosin X
hg19_v1_chr7_+_28452143_28452143	1.71963	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr13_+_111137249_111137279	1.71123	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg19_v1_chr1_-_36097137_36097137	1.70767	SOX2.p2	AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2
hg19_v1_chr7_+_80267782_80267831	1.70701	SOX2.p2	NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)	NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr3_-_123339423_123339529	1.70251	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr12_-_8815479_8815486	1.69686	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr5_+_126112819_126112844	1.69437	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg19_v1_chr19_-_49865638_49865713	1.69222	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg19_v1_chr1_-_155177685_155177771	1.66282	SOX2.p2	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3	NM_001252607|THBS3|7059|thrombospondin 3	NM_001252608|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3
hg19_v1_chr2_-_190044330_190044604	1.65483	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	M31365|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg19_v1_chr15_-_56209305_56209328	1.64592	SOX2.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg19_v1_chr12_+_48876285_48876285	1.64344	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg19_v1_chr4_-_57522469_57522687	1.64312	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg19_v1_chr1_+_84630575_84630648	1.64163	SOX2.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr3_+_189507448_189507589	1.63743	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg19_v1_chr6_+_12290528_12290658	1.63321	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr21_-_32201926_32202050	1.62872	SOX2.p2	AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)
hg19_v1_chr10_-_29754478_29754624	1.61875	SOX2.p2	BX648589|SVIL|6840|supervillin
hg19_v1_chr21_+_35190586_35190755	1.61182	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr5_+_149865310_149865568	1.58939	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v1_chr7_-_148581359_148581376	1.58587	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr2_-_166060552_166060603	1.56803	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr7_-_143059144_143059172	1.55867	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr1_-_153067000_153067000	1.55785	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg19_v1_chr7_+_94297448_94297456	1.55779	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr6_-_64029847_64029881	1.55461	SOX2.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr7_-_14030864_14030873	1.55181	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg19_v1_chr16_+_55600583_55600667	1.55016	SOX2.p2	BC006000|CAPNS2|84290|calpain, small subunit 2	NM_032330|CAPNS2|84290|calpain, small subunit 2	BC005397|CAPNS2|84290|calpain, small subunit 2	AY052551|CAPNS2|84290|calpain, small subunit 2	EU832656|CAPNS2|84290|calpain, small subunit 2
hg19_v1_chr12_+_93963597_93963597	1.54683	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg19_v1_chr3_+_189349215_189349304	1.53947	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg19_v1_chr8_-_124553448_124553514	1.53862	SOX2.p2	NM_001242463|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg19_v1_chr7_-_148581377_148581378	1.53619	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr13_+_78109808_78109894	1.5245	SOX2.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr5_-_39424930_39424973	1.51806	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr2_+_208576239_208576364	1.50823	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr4_+_156680125_156680283	1.50584	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr20_-_5591487_5591688	1.50263	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v1_chr15_+_67358194_67358609	1.49967	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg19_v1_chr11_-_71752099_71752188	1.48594	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr16_+_58497548_58497612	1.47285	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr19_-_42931500_42931577	1.47234	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg19_v1_chr7_-_14031049_14031049	1.46868	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg19_v1_chr3_-_192635933_192635949	1.46684	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr21_+_30517897_30517923	1.46284	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg19_v1_chr7_+_111846642_111846702	1.46023	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg19_v1_chr16_-_90085786_90086013	1.44317	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg19_v1_chr9_+_116342939_116342939	1.44211	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr9_-_95298251_95298373	1.43554	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr17_-_7297826_7297888	1.42463	SOX2.p2	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr9_+_116343169_116343207	1.42413	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr6_+_80714389_80714409	1.41752	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg19_v1_chrX_+_41548225_41548310	1.40921	SOX2.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg19_v1_chr19_+_41257086_41257312	1.40698	SOX2.p2	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr5_-_114515733_114516242	1.40466	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg19_v1_chr13_-_25745778_25745856	1.40084	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chr5_-_132161863_132162001	1.39153	SOX2.p2	BC104914|SHROOM1|134549|shroom family member 1	BC104916|SHROOM1|134549|shroom family member 1	BC143494|SHROOM1|134549|shroom family member 1	AF314142|SHROOM1|134549|shroom family member 1	NM_133456|SHROOM1|134549|shroom family member 1
hg19_v1_chr12_+_49212253_49212314	1.38788	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg19_v1_chr16_+_58497628_58497648	1.38661	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr17_-_10452939_10453016	1.38582	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg19_v1_chr3_-_119582422_119582427	1.38365	SOX2.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr15_-_70390229_70390258	1.38133	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr7_+_129015483_129015483	1.38024	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr11_-_55703875_55703875	1.37895	SOX2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg19_v1_chr5_+_86563594_86563777	1.3781	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr12_+_53443834_53443966	1.36926	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr19_+_41256758_41256795	1.36914	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr9_+_75136716_75136716	1.36724	SOX2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg19_v1_chr1_+_153232178_153232178	1.36382	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg19_v1_chr7_+_77167351_77167385	1.35871	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr22_+_21271723_21271939	1.35521	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr1_+_116654375_116654375	1.35501	SOX2.p2	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)	NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)
hg19_v1_chr2_+_113735595_113735608	1.34864	SOX2.p2	AY359111|IL36G|56300|interleukin 36, gamma	AF200492|IL36G|56300|interleukin 36, gamma	NM_019618|IL36G|56300|interleukin 36, gamma	AF206696|IL36G|56300|interleukin 36, gamma
hg19_v1_chr2_+_70142303_70142462	1.3465	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1	HQ258749|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr9_+_116263706_116263856	1.34613	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr14_+_85996512_85996571	1.34436	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr7_-_148581403_148581449	1.34426	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr11_-_123524881_123525042	1.34159	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr7_-_148581379_148581383	1.34084	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr17_-_41623652_41623801	1.34005	SOX2.p2	AK315961|ETV4|2118|ets variant 4	U18018|ETV4|2118|ets variant 4	NM_001079675|ETV4|2118|ets variant 4
hg19_v1_chr21_-_44846927_44847064	1.33669	SOX2.p2	AB047786|SIK1|150094|salt-inducible kinase 1	NM_173354|SIK1|150094|salt-inducible kinase 1	BC038504|SIK1|150094|salt-inducible kinase 1
hg19_v1_chr14_-_55650348_55650465	1.33608	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg19_v1_chr19_+_18496966_18496999	1.33329	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg19_v1_chr9_-_23826062_23826062	1.31544	SOX2.p2	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg19_v1_chr17_+_48348766_48348766	1.31321	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg19_v1_chr16_+_27078218_27078277	1.3121	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg19_v1_chr1_-_115238091_115238238	1.30893	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg19_v1_chr8_-_87755880_87755944	1.30868	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg19_v1_chr4_+_78078332_78078391	1.3054	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg19_v1_chr9_+_77112251_77112298	1.3031	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr6_-_128222175_128222225	1.30194	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg19_v1_chr7_+_106505739_106505809	1.29682	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr16_+_69141442_69141442	1.2948	SOX2.p2	AF234839|HAS3|3038|hyaluronan synthase 3	NM_005329|HAS3|3038|hyaluronan synthase 3
hg19_v1_chr10_+_70847817_70847855	1.2923	SOX2.p2	NM_002727|SRGN|5552|serglycin
hg19_v1_chrX_-_38079980_38080271	1.29182	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg19_v1_chr6_+_36644236_36644266	1.29073	SOX2.p2	NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v1_chr5_-_176836535_176836576	1.29072	SOX2.p2	AB095845|F12|2161|coagulation factor XII (Hageman factor)	NM_000505|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chrX_-_100872926_100872990	1.287	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr9_-_36276930_36277052	1.28697	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg19_v1_chr13_-_24007822_24007859	1.27926	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr3_-_149095413_149095452	1.27448	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr12_+_70759974_70760559	1.274	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr4_+_41258941_41259010	1.27397	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr12_-_8815266_8815327	1.26969	SOX2.p2	AK315807|MFAP5|8076|microfibrillar associated protein 5	BC005901|MFAP5|8076|microfibrillar associated protein 5	AK290585|MFAP5|8076|microfibrillar associated protein 5	AK299475|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chrX_+_107288199_107288320	1.26934	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chrX_-_15683153_15683153	1.26501	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chrX_+_48367346_48367476	1.26254	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr8_+_86376130_86376310	1.25776	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	AF015039|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg19_v1_chr6_-_111888520_111888520	1.2577	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg19_v1_chr12_-_11548485_11548497	1.25766	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg19_v1_chr1_+_90098693_90098836	1.257	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr7_+_2671582_2671624	1.25301	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr4_-_103266577_103266692	1.25205	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr3_+_147111221_147111244	1.25042	SOX2.p2	
hg19_v1_chr3_-_149086884_149086954	1.24949	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr2_+_54785453_54785678	1.24492	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg19_v1_chr22_+_30792929_30793101	1.24394	SOX2.p2	NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg19_v1_chrX_+_111119278_111119427	1.24221	SOX2.p2	NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135	NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135
hg19_v1_chr7_-_99698278_99698385	1.24034	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr1_-_43855448_43855454	1.23804	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg19_v1_chr1_+_120254418_120254645	1.23626	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr6_+_121756744_121756906	1.23563	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chrX_+_48368063_48368208	1.2345	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr1_+_197886499_197886516	1.23296	SOX2.p2	AY273889|LHX9|56956|LIM homeobox 9	NM_020204|LHX9|56956|LIM homeobox 9
hg19_v1_chr22_+_21271721_21271722	1.22498	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr14_-_57960432_57960575	1.2192	SOX2.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr7_+_2671630_2671777	1.21629	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr12_+_14538232_14538312	1.21469	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg19_v1_chr5_-_176836488_176836522	1.21444	SOX2.p2	M11723|F12|2161|coagulation factor XII (Hageman factor)	M31315|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chr16_+_58534045_58534152	1.20801	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr2_+_198669316_198669425	1.20181	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg19_v1_chr2_+_210444154_210444187	1.20001	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr2_-_75788027_75788067	1.19957	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr3_-_111314181_111314181	1.19323	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr4_+_78078394_78078526	1.19132	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg19_v1_chr17_-_37764165_37764181	1.18499	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg19_v1_chr2_-_31637553_31637590	1.18129	SOX2.p2	U39487|XDH|7498|xanthine dehydrogenase	D11456|XDH|7498|xanthine dehydrogenase	U06117|XDH|7498|xanthine dehydrogenase
hg19_v1_chr9_+_103204187_103204220	1.17166	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr20_+_6748744_6748744	1.17147	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg19_v1_chr7_+_143058794_143058809	1.16637	SOX2.p2	AK316227|ZYX|7791|zyxin
hg19_v1_chr13_-_74707913_74708065	1.16385	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr6_-_11232900_11232900	1.16256	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr12_-_11508509_11508524	1.16235	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg19_v1_chr4_+_41258909_41258928	1.1621	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr4_+_41258895_41258897	1.15796	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr7_-_107443631_107443677	1.15788	SOX2.p2	L02785|SLC26A3|1811|solute carrier family 26, member 3	BC025671|SLC26A3|1811|solute carrier family 26, member 3	BX640837|SLC26A3|1811|solute carrier family 26, member 3	NM_000111|SLC26A3|1811|solute carrier family 26, member 3
hg19_v1_chr17_-_48262900_48262939	1.15727	SOX2.p2	J00113|COL1A1|1277|collagen, type I, alpha 1	M32798|COL1A1|1277|collagen, type I, alpha 1
hg19_v1_chr6_-_30654978_30654992	1.15609	SOX2.p2	AB073600|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	BX647622|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr3_+_156392204_156392204	1.13975	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr2_+_70142236_70142265	1.13431	SOX2.p2	AK301088|MXD1|4084|MAX dimerization protein 1	AK312734|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr7_+_123249076_123249111	1.13313	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg19_v1_chr21_-_16437125_16437309	1.13299	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg19_v1_chr12_-_16759531_16759536	1.13072	SOX2.p2	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr18_+_42260774_42260963	1.12784	SOX2.p2	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg19_v1_chr8_+_26435920_26435934	1.12679	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr15_-_74726000_74726058	1.12582	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v1_chr22_+_21271619_21271720	1.12423	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr18_+_29171729_29171865	1.12341	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	GU727633|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg19_v1_chrX_+_99839789_99840014	1.12224	SOX2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg19_v1_chr9_+_101705710_101706256	1.12208	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg19_v1_chr11_+_46402333_46402617	1.12126	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr15_+_52201590_52201630	1.12009	SOX2.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr18_-_31802433_31802433	1.11697	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg19_v1_chr4_-_48014960_48014960	1.10447	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr3_-_192635627_192635646	1.10379	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr9_+_103235489_103235519	1.10335	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr7_+_73703704_73703871	1.09916	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg19_v1_chr10_+_74653338_74653529	1.09629	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg19_v1_chr1_-_154155698_154155724	1.09474	SOX2.p2	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg19_v1_chr18_-_13915534_13915538	1.09376	SOX2.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v1_chr15_+_80364902_80364950	1.09256	SOX2.p2	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6	AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6	AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr2_+_115219153_115219179	1.09077	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg19_v1_chr13_-_99630243_99630337	1.09071	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chr1_-_162381805_162381927	1.09039	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg19_v1_chr8_-_95449131_95449179	1.08971	SOX2.p2	AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg19_v1_chr1_+_84630014_84630064	1.0853	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr7_-_92747317_92747335	1.08327	SOX2.p2	BC065769|SAMD9|54809|sterile alpha motif domain containing 9	AF445355|SAMD9|54809|sterile alpha motif domain containing 9	NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9	NM_017654|SAMD9|54809|sterile alpha motif domain containing 9
hg19_v1_chr1_+_16090993_16091029	1.08244	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr18_+_657461_657632	1.08049	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr2_+_90211704_90211733	1.07998	SOX2.p2	
hg19_v1_chr3_+_156394452_156394452	1.07909	SOX2.p2	BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr6_+_106546736_106546873	1.07614	SOX2.p2	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain	EF151143|PRDM1|639|PR domain containing 1, with ZNF domain
hg19_v1_chr15_+_59908908_59909017	1.076	SOX2.p2	AK312852|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr9_+_103235634_103235825	1.07216	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chrX_+_21958714_21958938	1.07147	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chr1_+_109419601_109419621	1.07102	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr17_-_67138013_67138137	1.07096	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v1_chr6_-_11232901_11232920	1.06769	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr17_-_7298160_7298161	1.06682	SOX2.p2	NM_001201576|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr12_-_117742856_117742856	1.06514	SOX2.p2	NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg19_v1_chr9_+_124461365_124461648	1.06267	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chrX_-_139866582_139866722	1.0615	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg19_v1_chr6_-_11232883_11232899	1.0615	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr17_+_30814708_30814813	1.06142	SOX2.p2	
hg19_v1_chr9_+_91926109_91926207	1.0595	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr11_+_22359666_22359666	1.05943	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg19_v1_chr2_-_9143742_9143901	1.05397	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg19_v1_chr10_+_11206928_11207010	1.05369	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr8_+_39771327_39771441	1.05297	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1	JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg19_v1_chr12_+_56360547_56360632	1.05084	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr1_+_16085245_16085309	1.04316	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr6_+_29794743_29794763	1.04185	SOX2.p2	BC021708|HLA-G|3135|major histocompatibility complex, class I, G	AK302054|HLA-G|3135|major histocompatibility complex, class I, G	NM_002127|HLA-G|3135|major histocompatibility complex, class I, G	AK093478|HLA-G|3135|major histocompatibility complex, class I, G
hg19_v1_chr10_-_88717319_88717424	1.03732	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg19_v1_chr14_+_23305907_23305912	1.03628	SOX2.p2	X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr7_-_111846384_111846540	1.03315	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr7_+_93551015_93551098	1.02647	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg19_v1_chr13_+_98086681_98086724	1.02625	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg19_v1_chr5_-_16936371_16936400	1.02617	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg19_v1_chr11_+_128563772_128563824	1.02336	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr21_+_30671736_30671736	1.02257	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v1_chr12_+_53442732_53442789	1.0206	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr10_+_99400441_99400444	1.02044	SOX2.p2	AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr13_-_33760215_33760215	1.01964	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr1_-_53793743_53793820	1.01876	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr4_+_71587674_71587767	1.01651	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr4_-_101439071_101439249	1.01594	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg19_v1_chr12_-_71148383_71148538	1.00995	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr6_-_35696359_35696359	1.0051	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg19_v1_chr7_+_111846736_111846805	1.00486	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg19_v1_chr5_-_39425297_39425338	1.00404	SOX2.p2	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr6_+_15246299_15246526	1.00394	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr11_+_128563993_128564117	0.997361	SOX2.p2	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr16_-_11375094_11375191	0.99514	SOX2.p2	BT006746|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1
hg19_v1_chr2_-_100722328_100722589	0.990809	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr11_+_131780537_131780711	0.99057	SOX2.p2	NM_001144058|NTM|50863|neurotrimin	NM_001144059|NTM|50863|neurotrimin	NM_016522|NTM|50863|neurotrimin
hg19_v1_chr19_+_39903749_39903749	0.987946	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg19_v1_chr17_-_41623246_41623304	0.987339	SOX2.p2	BC016623|ETV4|2118|ets variant 4	AK290429|ETV4|2118|ets variant 4	AK299019|ETV4|2118|ets variant 4	AK312934|ETV4|2118|ets variant 4	NM_001986|ETV4|2118|ets variant 4
hg19_v1_chr12_-_8043743_8043794	0.987012	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v1_chr1_+_109419748_109419826	0.981345	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr19_-_15590203_15590316	0.981124	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg19_v1_chr10_+_91461333_91461418	0.979928	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg19_v1_chr9_+_127420690_127420719	0.978347	SOX2.p2	AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)
hg19_v1_chr8_+_87111132_87111157	0.977148	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v1_chr17_+_76210329_76210465	0.97686	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	HM625836|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg19_v1_chr10_-_30024594_30024934	0.975785	SOX2.p2	AF051850|SVIL|6840|supervillin	NM_003174|SVIL|6840|supervillin
hg19_v1_chr6_-_27880173_27880173	0.975357	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg19_v1_chr6_-_42419782_42419864	0.975165	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg19_v1_chr1_-_24239758_24239851	0.974202	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg19_v1_chr4_+_2820540_2820540	0.974134	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chrX_-_106959597_106959710	0.971387	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chrX_-_100914816_100914862	0.971255	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr15_-_34659245_34659915	0.970832	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr11_-_119599253_119599512	0.970703	SOX2.p2	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v1_chr8_+_10530146_10530173	0.961251	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74	HQ258143|C8orf74|203076|chromosome 8 open reading frame 74
hg19_v1_chr4_-_65275000_65275193	0.960976	SOX2.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg19_v1_chr3_-_14989857_14989930	0.959898	SOX2.p2	AK096279|LOC100505641|100505641|uncharacterized LOC100505641	BC033386|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr11_-_84634437_84634464	0.95655	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr1_+_12834983_12834983	0.956021	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg19_v1_chr5_-_22853730_22853730	0.954929	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr7_-_84751246_84751246	0.953709	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg19_v1_chr8_+_36641841_36641900	0.948559	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg19_v1_chr22_-_50523853_50524033	0.948184	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr5_-_16742336_16742338	0.947328	SOX2.p2	AK316138|MYO10|4651|myosin X
hg19_v1_chr15_+_71839540_71839620	0.94622	SOX2.p2	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4	AK303870|THSD4|79875|thrombospondin, type I, domain containing 4	BX648716|THSD4|79875|thrombospondin, type I, domain containing 4	AY358143|THSD4|79875|thrombospondin, type I, domain containing 4
hg19_v1_chr10_+_102759232_102759264	0.944771	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr6_-_112080284_112080333	0.944195	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chr12_+_56324945_56325082	0.942124	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg19_v1_chr7_+_28725597_28725769	0.938948	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr3_+_136649316_136649358	0.938308	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr11_-_117166247_117166385	0.937919	SOX2.p2	AB177847|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296015|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296535|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207048|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207049|BACE1|23621|beta-site APP-cleaving enzyme 1
hg19_v1_chr7_-_92747269_92747298	0.933359	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg19_v1_chr17_-_76921076_76921155	0.932269	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr1_+_178310605_178310663	0.93133	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg19_v1_chr3_+_130569368_130569444	0.929678	SOX2.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chr9_+_116638544_116638655	0.927594	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg19_v1_chr22_+_27053392_27053552	0.923427	SOX2.p2	AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)
hg19_v1_chr8_-_125579395_125579418	0.922972	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr6_+_41040713_41040732	0.922613	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr21_-_42879908_42880067	0.92232	SOX2.p2	AK291813|TMPRSS2|7113|transmembrane protease, serine 2	AK296860|TMPRSS2|7113|transmembrane protease, serine 2	NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2	BC051839|TMPRSS2|7113|transmembrane protease, serine 2	AF270487|TMPRSS2|7113|transmembrane protease, serine 2	BC035623|TMPRSS2|7113|transmembrane protease, serine 2
hg19_v1_chrX_+_28605558_28605680	0.921502	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr14_+_23305913_23306026	0.920466	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr17_+_30814552_30814643	0.920161	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr13_-_60587298_60587342	0.92016	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg19_v1_chr19_-_43098980_43099081	0.920129	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg19_v1_chr12_-_48963802_48963828	0.918065	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	HQ258062|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg19_v1_chr1_-_226496838_226496954	0.915455	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr3_+_156392369_156392435	0.911885	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v1_chr13_-_21635703_21635729	0.907821	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr20_-_56286540_56286540	0.904346	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg19_v1_chr19_-_17375522_17375572	0.903662	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg19_v1_chr12_+_58120029_58120108	0.903554	SOX2.p2	AK301303|LOC100130776|100130776|uncharacterized LOC100130776	BC069024|LOC100130776|100130776|uncharacterized LOC100130776	BC039697|LOC100130776|100130776|uncharacterized LOC100130776	BC019026|LOC100130776|100130776|uncharacterized LOC100130776
hg19_v1_chr9_-_77502635_77502834	0.899802	SOX2.p2	AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr12_-_102872329_102872428	0.896871	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr15_-_59665069_59665072	0.895353	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr12_+_21525801_21525855	0.892352	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg19_v1_chr3_-_71353910_71353910	0.892152	SOX2.p2	AK092383|FOXP1|27086|forkhead box P1	NM_001244812|FOXP1|27086|forkhead box P1
hg19_v1_chr13_-_33780142_33780186	0.891761	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr11_+_112831968_112832006	0.8891	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_001242607|NCAM1|4684|neural cell adhesion molecule 1	NM_001242608|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr7_-_11871735_11871844	0.888621	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chr19_+_45971249_45971290	0.885378	SOX2.p2	EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v1_chr5_+_31193852_31193902	0.884463	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr11_+_69455837_69455875	0.883549	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg19_v1_chr6_+_34204928_34204935	0.880838	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr1_+_50574601_50574768	0.87868	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr6_+_47666288_47666301	0.877808	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg19_v1_chr3_-_112359547_112359558	0.876276	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_+_95611514_95611874	0.874373	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg19_v1_chr3_+_186915273_186915411	0.873778	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg19_v1_chr1_+_6685209_6685278	0.873054	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr11_-_69634191_69634191	0.872354	SOX2.p2	NM_005247|FGF3|2248|fibroblast growth factor 3
hg19_v1_chr20_-_44298877_44298908	0.872259	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg19_v1_chr15_-_72598655_72598655	0.870327	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg19_v1_chr1_-_154155594_154155633	0.869773	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg19_v1_chr12_-_113909876_113909876	0.868944	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg19_v1_chr18_+_657674_657748	0.867787	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr15_-_83876769_83876824	0.867449	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr4_+_3294711_3294809	0.866708	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr20_-_60942300_60942454	0.865097	SOX2.p2	BC015386|LAMA5|3911|laminin, alpha 5	BC085017|LAMA5|3911|laminin, alpha 5	AF443072|LAMA5|3911|laminin, alpha 5	NM_005560|LAMA5|3911|laminin, alpha 5
hg19_v1_chr4_+_95128750_95128872	0.86239	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr9_+_18474078_18474098	0.860085	SOX2.p2	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr8_-_8750739_8751137	0.858525	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg19_v1_chr15_-_31947541_31947541	0.858468	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr3_+_111260925_111261007	0.857688	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg19_v1_chr7_+_106505876_106505982	0.856938	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr20_-_30288094_30288101	0.855007	SOX2.p2	
hg19_v1_chr10_-_13749622_13749756	0.853915	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg19_v1_chr11_-_83393436_83393467	0.853459	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr9_+_116356199_116356222	0.853201	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr4_+_95128994_95129234	0.84898	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr3_+_154797435_154797463	0.847883	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg19_v1_chr2_+_204571379_204571419	0.847449	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg19_v1_chr5_+_34687663_34687663	0.845299	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_-_51887740_51887792	0.844331	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr12_-_67072752_67072761	0.840207	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr1_-_116383323_116383361	0.839116	SOX2.p2	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr5_-_150521200_150521215	0.836002	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg19_v1_chr4_-_40936640_40936716	0.835416	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr11_-_84634219_84634246	0.833073	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chrX_+_115301957_115302033	0.832642	SOX2.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg19_v1_chr4_-_76928601_76928661	0.832094	SOX2.p2	BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9	NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9	X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9	AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9
hg19_v1_chrX_-_55057408_55057496	0.828623	SOX2.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr10_+_102759607_102759686	0.82851	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr22_+_38092994_38093010	0.825912	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg19_v1_chr3_-_169487602_169487682	0.825263	SOX2.p2	BC007289|ARPM1|84517|actin related protein M1	AK055346|ARPM1|84517|actin related protein M1	NM_032487|ARPM1|84517|actin related protein M1
hg19_v1_chr2_+_27070962_27071291	0.824972	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5
hg19_v1_chrX_-_142723921_142723925	0.824668	SOX2.p2	NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg19_v1_chr19_+_40093163_40093207	0.824049	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg19_v1_chr9_+_96846710_96846793	0.823667	SOX2.p2	NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg19_v1_chr22_+_29999649_30000080	0.822978	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg19_v1_chr8_+_21777216_21777281	0.820714	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr8_+_80523376_80523431	0.818183	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg19_v1_chr8_-_33424642_33424684	0.816131	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg19_v1_chr8_+_11660297_11660341	0.813821	SOX2.p2	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr9_-_99064385_99064433	0.813237	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v1_chr15_+_93443559_93443602	0.813141	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr17_-_39211462_39211462	0.812928	SOX2.p2	NM_033032|KRTAP2-2|728279|keratin associated protein 2-2
hg19_v1_chr20_+_62328002_62328021	0.811642	SOX2.p2	NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v1_chr22_+_38599026_38599026	0.808529	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr18_-_24445652_24445781	0.808502	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4	HQ901095|AQP4|361|aquaporin 4
hg19_v1_chr2_-_85641128_85641145	0.807384	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg19_v1_chr11_-_16497917_16497934	0.805528	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr10_+_70847857_70847912	0.804795	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin
hg19_v1_chr2_-_192711651_192711826	0.80297	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chrX_+_152908819_152908931	0.801317	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr11_+_57365026_57365209	0.799871	SOX2.p2	NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr7_+_39017608_39017608	0.798661	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg19_v1_chr17_-_27139391_27139503	0.797844	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg19_v1_chr10_-_99052358_99052390	0.796474	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr17_-_38859976_38860001	0.795276	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg19_v1_chr4_+_78079302_78079685	0.794749	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg19_v1_chr14_-_47812394_47812437	0.794549	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v1_chr11_-_124310980_124311053	0.794393	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg19_v1_chr13_+_52158483_52158591	0.794363	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg19_v1_chr13_-_21635629_21635702	0.793164	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr11_-_72380107_72380107	0.793007	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr20_-_34241830_34241830	0.7925	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg19_v1_chr5_+_57878901_57878938	0.791456	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr14_+_37131116_37131134	0.79063	SOX2.p2	AK313627|PAX9|5083|paired box 9	AB248958|PAX9|5083|paired box 9
hg19_v1_chr6_-_131321868_131321906	0.789703	SOX2.p2	CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr6_-_42110714_42110714	0.78743	SOX2.p2	NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132
hg19_v1_chr6_+_155538096_155538160	0.78699	SOX2.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg19_v1_chr16_+_8807426_8807470	0.786416	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr17_+_65373362_65373456	0.785863	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr17_-_39306053_39306053	0.783233	SOX2.p2	AJ406937|KRTAP4-5|85289|keratin associated protein 4-5	NM_033188|KRTAP4-5|85289|keratin associated protein 4-5
hg19_v1_chr17_+_27573874_27573881	0.782136	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1	HQ258110|CRYBA1|1411|crystallin, beta A1
hg19_v1_chr10_-_99052391_99052427	0.781974	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chrX_+_99899388_99899402	0.780295	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr1_+_84630374_84630386	0.778883	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr19_-_11305186_11305265	0.777374	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg19_v1_chr2_-_85641153_85641179	0.775921	SOX2.p2	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like
hg19_v1_chr17_-_62658175_62658190	0.775903	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr1_-_243418675_243418707	0.774384	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr6_+_64282449_64282638	0.774184	SOX2.p2	BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr11_-_58343308_58343389	0.772304	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg19_v1_chr10_+_102123420_102123604	0.77138	SOX2.p2	
hg19_v1_chr10_-_90712510_90712579	0.771373	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chrX_+_38211735_38211913	0.771289	SOX2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg19_v1_chr1_+_16010838_16011050	0.770819	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr3_-_112359443_112359478	0.769853	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_-_25055228_25055321	0.768846	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr11_-_14386051_14386051	0.76781	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr1_-_110283659_110283659	0.765955	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg19_v1_chr18_+_56530060_56530179	0.765861	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chrX_+_99899162_99899303	0.764507	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr10_-_99052429_99052449	0.762497	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19	NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr1_-_198510074_198510074	0.75515	SOX2.p2	NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3	NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg19_v1_chr11_-_47207425_47207431	0.75373	SOX2.p2	AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3
hg19_v1_chr18_+_31158540_31158578	0.752861	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg19_v1_chr8_+_11660272_11660291	0.751751	SOX2.p2	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr1_+_165797060_165797112	0.748586	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg19_v1_chr9_+_137218324_137218477	0.747642	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha	HQ692843|RXRA|6256|retinoid X receptor, alpha
hg19_v1_chr9_-_21482311_21482311	0.74737	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg19_v1_chr2_+_70142152_70142235	0.747168	SOX2.p2	NM_001202513|MXD1|4084|MAX dimerization protein 1	NM_001202514|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1	BC098396|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr2_+_75059781_75059781	0.746334	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg19_v1_chr8_-_125580745_125580777	0.742994	SOX2.p2	AF116674|MTSS1|9788|metastasis suppressor 1
hg19_v1_chrX_-_134185978_134186280	0.742811	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg19_v1_chr18_+_657633_657663	0.739286	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chr12_+_20724797_20724797	0.739051	SOX2.p2	AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited
hg19_v1_chr13_+_96085852_96085857	0.737528	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr3_+_111578026_111578116	0.737438	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg19_v1_chrX_-_128977291_128977560	0.734592	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr6_+_30688144_30688304	0.733975	SOX2.p2	BC002347|TUBB|203068|tubulin, beta class I	BC007605|TUBB|203068|tubulin, beta class I	AB062393|TUBB|203068|tubulin, beta class I	BC001938|TUBB|203068|tubulin, beta class I	BC005838|TUBB|203068|tubulin, beta class I	AF070561|TUBB|203068|tubulin, beta class I	AF070593|TUBB|203068|tubulin, beta class I	BC013374|TUBB|203068|tubulin, beta class I	NM_178014|TUBB|203068|tubulin, beta class I	BC021909|TUBB|203068|tubulin, beta class I	BC019924|TUBB|203068|tubulin, beta class I	BC062532|TUBB|203068|tubulin, beta class I	AK297489|TUBB|203068|tubulin, beta class I	DQ891742|TUBB|203068|tubulin, beta class I	DQ891828|TUBB|203068|tubulin, beta class I	DQ894920|TUBB|203068|tubulin, beta class I	V00599|TUBB|203068|tubulin, beta class I
hg19_v1_chr1_+_16010816_16010831	0.733197	SOX2.p2	BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2	NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr22_+_20909221_20909393	0.733052	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg19_v1_chr17_+_54230835_54230838	0.732628	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v1_chrX_-_128977719_128977938	0.732431	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr5_-_147162251_147162257	0.732348	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr2_-_1926501_1926602	0.732016	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr4_+_71494460_71494460	0.731512	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg19_v1_chr1_-_47695442_47695442	0.731259	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chrX_-_138914384_138914446	0.731095	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg19_v1_chr5_-_77805930_77806179	0.730066	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr12_-_71148331_71148370	0.729503	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr11_+_60691911_60691959	0.728411	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg19_v1_chr3_+_182971592_182971620	0.726976	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr9_-_136344182_136344275	0.726263	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg19_v1_chr11_+_118478305_118478450	0.725539	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg19_v1_chr5_-_147162175_147162231	0.725378	SOX2.p2	BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr3_-_149095333_149095399	0.72487	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chrX_+_46937807_46937868	0.724696	SOX2.p2	BC050371|RGN|9104|regucalcin (senescence marker protein-30)	BC058880|RGN|9104|regucalcin (senescence marker protein-30)	AK290136|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr4_-_152149042_152149181	0.724132	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19	NM_001243349|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr3_-_112359251_112359260	0.718729	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr7_-_158611301_158611440	0.717119	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg19_v1_chrX_+_46937889_46937971	0.715575	SOX2.p2	BC073173|RGN|9104|regucalcin (senescence marker protein-30)	AB032064|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr1_-_53793583_53793742	0.714759	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr1_+_23695441_23695549	0.714431	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg19_v1_chr3_+_136676706_136676955	0.710711	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg19_v1_chr8_-_80993009_80993050	0.709504	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr4_+_115543522_115543522	0.709358	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg19_v1_chr5_-_95158465_95158576	0.708908	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr2_+_185463437_185463548	0.707634	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr12_-_102874340_102874344	0.704719	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr3_-_189840225_189840225	0.703963	SOX2.p2	NM_001134418|LEPREL1|55214|leprecan-like 1
hg19_v1_chr6_+_30688085_30688141	0.703427	SOX2.p2	AK303227|TUBB|203068|tubulin, beta class I	BC020946|TUBB|203068|tubulin, beta class I	AK297638|TUBB|203068|tubulin, beta class I	AK098772|TUBB|203068|tubulin, beta class I	AK316265|TUBB|203068|tubulin, beta class I	BC103746|TUBB|203068|tubulin, beta class I	AF070600|TUBB|203068|tubulin, beta class I	AF141349|TUBB|203068|tubulin, beta class I	BC070326|TUBB|203068|tubulin, beta class I
hg19_v1_chr7_+_128095881_128096051	0.702049	SOX2.p2	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated	NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated	AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated
hg19_v1_chr5_-_39425030_39425098	0.701873	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr14_+_37131064_37131105	0.701647	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg19_v1_chr12_-_118498893_118498977	0.700658	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg19_v1_chr16_+_127017_127017	0.700653	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg19_v1_chr6_-_75915566_75915745	0.699752	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr2_+_11680079_11680128	0.698997	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr7_+_150690838_150690891	0.698164	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr5_-_22853435_22853458	0.694301	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr8_+_22022677_22022865	0.689349	SOX2.p2	AB209590|BMP1|649|bone morphogenetic protein 1	BC002593|BMP1|649|bone morphogenetic protein 1	BC009305|BMP1|649|bone morphogenetic protein 1	BC032105|BMP1|649|bone morphogenetic protein 1	BC044626|BMP1|649|bone morphogenetic protein 1	BC142953|BMP1|649|bone morphogenetic protein 1	AK291620|BMP1|649|bone morphogenetic protein 1	BC136679|BMP1|649|bone morphogenetic protein 1	BC144365|BMP1|649|bone morphogenetic protein 1	BC144366|BMP1|649|bone morphogenetic protein 1	BC101763|BMP1|649|bone morphogenetic protein 1	BC101765|BMP1|649|bone morphogenetic protein 1	BC143338|BMP1|649|bone morphogenetic protein 1
hg19_v1_chr11_+_130184326_130184418	0.688134	SOX2.p2	AK091840|FLJ34521|646383|uncharacterized LOC646383
hg19_v1_chrX_+_51927918_51928036	0.688033	SOX2.p2	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr3_+_98216447_98216524	0.687005	SOX2.p2	BC136724|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	BC136725|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	NM_001004737|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2
hg19_v1_chr2_-_128421965_128422166	0.686896	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr5_-_111754738_111755009	0.686609	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg19_v1_chr18_+_61254533_61254662	0.686348	SOX2.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg19_v1_chr19_+_9296269_9296269	0.684447	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg19_v1_chr5_+_96212167_96212209	0.683194	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg19_v1_chr1_+_192127591_192127616	0.682931	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr6_+_41040891_41040960	0.682334	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr3_+_155588423_155588445	0.681776	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr4_-_138453628_138453657	0.681625	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg19_v1_chr19_+_35782988_35783096	0.681366	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr3_-_99594915_99595067	0.681113	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr1_+_228337414_228337414	0.679276	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg19_v1_chr11_+_128563973_128563988	0.67913	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr7_-_122339186_122339209	0.678671	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg19_v1_chr15_-_56388662_56388733	0.677605	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg19_v1_chr11_+_62186506_62186567	0.677575	SOX2.p2	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)
hg19_v1_chr12_-_109915127_109915158	0.674117	SOX2.p2	AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10	AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10	NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr3_+_160394946_160394964	0.673802	SOX2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg19_v1_chr16_-_67977956_67978071	0.673646	SOX2.p2	M26268|LCAT|3931|lecithin-cholesterol acyltransferase	BT009748|LCAT|3931|lecithin-cholesterol acyltransferase	BC014781|LCAT|3931|lecithin-cholesterol acyltransferase	NM_000229|LCAT|3931|lecithin-cholesterol acyltransferase
hg19_v1_chr15_+_74907334_74907334	0.672339	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg19_v1_chr10_+_11207443_11207449	0.672281	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr22_+_50609159_50609189	0.671582	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg19_v1_chrX_+_64708614_64708705	0.668604	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg19_v1_chr2_+_201676774_201677130	0.668399	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1	AK297227|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr15_+_76629101_76629223	0.667345	SOX2.p2	AB593133|ISL2|64843|ISL LIM homeobox 2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg19_v1_chr5_+_159848876_159848931	0.667286	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr20_+_30102313_30102354	0.666946	SOX2.p2	AJ420895|HM13|81502|histocompatibility (minor) 13	DQ896206|HM13|81502|histocompatibility (minor) 13	AF515663|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr5_+_92918924_92919042	0.666332	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chrX_+_100354797_100354797	0.665557	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr20_+_44044706_44044803	0.665449	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg19_v1_chr10_-_69752385_69752431	0.664155	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr2_+_149633173_149633186	0.662996	SOX2.p2	
hg19_v1_chr8_+_22022872_22022927	0.662745	SOX2.p2	M22488|BMP1|649|bone morphogenetic protein 1	Y08723|BMP1|649|bone morphogenetic protein 1	Y08724|BMP1|649|bone morphogenetic protein 1	Y08725|BMP1|649|bone morphogenetic protein 1	U50330|BMP1|649|bone morphogenetic protein 1
hg19_v1_chr17_+_58499854_58499905	0.661451	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg19_v1_chr2_-_75788079_75788102	0.661425	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chrX_-_51812249_51812367	0.660814	SOX2.p2	BC063838|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr1_+_156052330_156052417	0.659363	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg19_v1_chrX_+_41583407_41583433	0.659326	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg19_v1_chr12_-_57634474_57634526	0.656947	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v1_chr1_-_23342342_23342342	0.654211	SOX2.p2	NM_001242521|LOC729059|729059|uncharacterized LOC729059
hg19_v1_chr2_+_234959345_234959430	0.654187	SOX2.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg19_v1_chr10_+_11047253_11047262	0.652593	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr4_+_54243731_54243808	0.652395	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr14_-_71275732_71275887	0.652389	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg19_v1_chr2_+_211342405_211342432	0.651905	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr3_-_112359565_112359589	0.651398	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_-_16759430_16759432	0.650908	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr12_-_95945226_95945262	0.650399	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg19_v1_chrX_+_46937744_46937774	0.650351	SOX2.p2	AK223360|RGN|9104|regucalcin (senescence marker protein-30)	NM_004683|RGN|9104|regucalcin (senescence marker protein-30)	NM_152869|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr3_-_99833348_99833356	0.650271	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr11_+_113775517_113775655	0.648275	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg19_v1_chr5_+_159848835_159848873	0.647991	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg19_v1_chr1_+_198608216_198608234	0.646983	SOX2.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr3_+_44626453_44626459	0.646789	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg19_v1_chr20_+_20348744_20348764	0.646134	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg19_v1_chr8_+_80523339_80523339	0.645191	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg19_v1_chr11_-_123756339_123756339	0.644047	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg19_v1_chr3_+_12330336_12330609	0.64046	SOX2.p2	AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma	NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma	BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma	AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg19_v1_chr4_+_54243822_54243828	0.640429	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr7_-_37025696_37025745	0.640104	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr9_-_34620489_34620497	0.639977	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr15_+_72766689_72766744	0.635097	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr9_-_34620483_34620488	0.635067	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr9_-_34620460_34620482	0.634874	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr3_-_112359660_112359673	0.634409	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr6_+_37137882_37138363	0.633724	SOX2.p2	NM_001243186|PIM1|5292|pim-1 oncogene	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg19_v1_chr5_-_71803119_71803248	0.633573	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg19_v1_chr9_-_107690526_107690532	0.633086	SOX2.p2	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr5_+_147774274_147774339	0.632857	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg19_v1_chr20_+_306205_306268	0.632291	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg19_v1_chr15_+_93447702_93447819	0.631819	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr12_-_109915093_109915122	0.631795	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr2_+_201676659_201676662	0.631165	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr4_-_165304406_165304406	0.630936	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr3_-_71179736_71179745	0.63015	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg19_v1_chr2_-_122159140_122159171	0.629661	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr22_-_36236264_36236318	0.629325	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr3_+_132757170_132757204	0.628386	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg19_v1_chr1_-_12677347_12677819	0.627863	SOX2.p2	DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3
hg19_v1_chr18_+_3451589_3451674	0.627497	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr17_-_38210611_38210678	0.627473	SOX2.p2	EU392536|MED24|9862|mediator complex subunit 24	EU392541|MED24|9862|mediator complex subunit 24	D50920|MED24|9862|mediator complex subunit 24	AK022508|MED24|9862|mediator complex subunit 24	AK303502|MED24|9862|mediator complex subunit 24	AK303745|MED24|9862|mediator complex subunit 24	AK291040|MED24|9862|mediator complex subunit 24	AK293309|MED24|9862|mediator complex subunit 24	AK299864|MED24|9862|mediator complex subunit 24	AK300992|MED24|9862|mediator complex subunit 24
hg19_v1_chr4_+_54243829_54243899	0.627143	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr12_-_49504337_49504513	0.62681	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg19_v1_chr14_+_64971417_64971470	0.626787	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr15_-_73661141_73661273	0.62644	SOX2.p2	AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v1_chr10_-_25241504_25241561	0.626359	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg19_v1_chr17_+_80416530_80416597	0.625796	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr2_-_100722259_100722277	0.625489	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chrX_+_15518899_15519039	0.625195	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr4_+_158141735_158142034	0.624712	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr8_-_93029864_93029907	0.624263	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr4_-_156787377_156787424	0.623984	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg19_v1_chr5_+_65017993_65018200	0.622885	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg19_v1_chr1_+_86046434_86046668	0.622351	SOX2.p2	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg19_v1_chr1_-_150978879_150979384	0.621722	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg19_v1_chr1_-_117210301_117210466	0.620501	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr19_+_34175433_34175433	0.620068	SOX2.p2	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg19_v1_chr2_+_201170603_201170615	0.619399	SOX2.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr8_-_30515665_30515808	0.619123	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg19_v1_chr1_-_205325915_205326165	0.616434	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg19_v1_chr8_+_80523048_80523048	0.616369	SOX2.p2	NM_001199214|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2
hg19_v1_chr5_-_36301999_36302010	0.616225	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg19_v1_chr3_+_154797644_154797704	0.614202	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg19_v1_chr17_-_39093671_39093835	0.613643	SOX2.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr3_+_136537860_136537979	0.61354	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr7_-_23509972_23510024	0.613529	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg19_v1_chr2_-_50574891_50574953	0.612923	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg19_v1_chr13_-_36050758_36050835	0.612908	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg19_v1_chr15_+_80696569_80696899	0.61123	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chr6_-_105850976_105851014	0.609743	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg19_v1_chr3_-_69037498_69037515	0.609622	SOX2.p2	AK123213|C3orf64|285203|chromosome 3 open reading frame 64
hg19_v1_chr16_-_22385596_22385995	0.609622	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg19_v1_chr12_-_69357019_69357020	0.609194	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg19_v1_chr8_+_70405080_70405098	0.608245	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg19_v1_chr2_+_143886969_143887013	0.608017	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg19_v1_chr3_+_134514300_134514302	0.607977	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg19_v1_chr1_+_209602164_209602167	0.606288	SOX2.p2	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)
hg19_v1_chr9_-_77503009_77503009	0.60612	SOX2.p2	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr12_+_130647002_130647019	0.605828	SOX2.p2	BC070037|FZD10|11211|frizzled family receptor 10	NM_007197|FZD10|11211|frizzled family receptor 10
hg19_v1_chr11_+_129979330_129979349	0.605501	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr10_-_5060191_5060206	0.605387	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr5_+_161277702_161277816	0.604901	SOX2.p2	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr6_-_10415438_10415499	0.604112	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr5_-_95158365_95158435	0.604038	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr12_+_93096618_93096618	0.602098	SOX2.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg19_v1_chr7_+_143412938_143412962	0.601756	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg19_v1_chr3_-_71542628_71542706	0.600856	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg19_v1_chr10_-_98119058_98119091	0.600083	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg19_v1_chr12_-_54779482_54779586	0.600078	SOX2.p2	AB593085|ZNF385A|25946|zinc finger protein 385A	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg19_v1_chr2_+_158114109_158114477	0.599284	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v1_chr11_+_93862143_93862159	0.598745	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr19_-_44100127_44100298	0.597797	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg19_v1_chr11_-_83984230_83984322	0.597247	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr1_-_67519698_67519855	0.596593	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg19_v1_chr11_-_10715032_10715128	0.595683	SOX2.p2	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr3_-_87040246_87040256	0.594495	SOX2.p2	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg19_v1_chr3_-_149095517_149095567	0.594053	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr12_+_85430098_85430148	0.591991	SOX2.p2	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1
hg19_v1_chr9_+_116356407_116356556	0.591883	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr15_+_74908195_74908248	0.591744	SOX2.p2	AK293769|CLK3|1198|CDC-like kinase 3	BC019881|CLK3|1198|CDC-like kinase 3	CR933693|CLK3|1198|CDC-like kinase 3	AK291983|CLK3|1198|CDC-like kinase 3	AK301689|CLK3|1198|CDC-like kinase 3	BC002555|CLK3|1198|CDC-like kinase 3	AK225680|CLK3|1198|CDC-like kinase 3	BC006103|CLK3|1198|CDC-like kinase 3
hg19_v1_chr2_-_110874142_110874142	0.59119	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr20_+_55099784_55099823	0.591134	SOX2.p2	NM_001012971|FAM209A|200232|family with sequence similarity 209, member A	BC029411|FAM209A|200232|family with sequence similarity 209, member A	BC105792|FAM209B|388799|family with sequence similarity 209, member B	BC107704|FAM209A|200232|family with sequence similarity 209, member A	BC070179|FAM209A|200232|family with sequence similarity 209, member A
hg19_v1_chr6_+_27292539_27292577	0.590411	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg19_v1_chr1_+_11751778_11751829	0.590179	SOX2.p2	BC111064|C1orf187|374946|chromosome 1 open reading frame 187	NM_198545|C1orf187|374946|chromosome 1 open reading frame 187	AK075558|C1orf187|374946|chromosome 1 open reading frame 187	AY358750|C1orf187|374946|chromosome 1 open reading frame 187
hg19_v1_chr10_-_11574273_11574273	0.589263	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr21_+_37507209_37507490	0.588615	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg19_v1_chr11_+_112832281_112832332	0.588186	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr2_+_204732509_204732665	0.584925	SOX2.p2	BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4
hg19_v1_chr10_+_18948276_18948566	0.584267	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg19_v1_chr2_-_192711923_192712020	0.583485	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr10_-_14372807_14372894	0.58307	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg19_v1_chr17_+_80416606_80416679	0.582233	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr14_-_102975996_102976070	0.580266	SOX2.p2	AK291868|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr6_-_11779279_11779279	0.58015	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg19_v1_chr4_-_164534656_164534775	0.57981	SOX2.p2	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr5_+_55062712_55062738	0.5797	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr5_-_147162056_147162132	0.578699	SOX2.p2	BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr13_-_110959441_110959577	0.577941	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg19_v1_chr17_+_65373574_65373603	0.577757	SOX2.p2	AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr7_-_86688944_86689013	0.577756	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr5_-_78809658_78809699	0.577622	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg19_v1_chr19_+_1026271_1026327	0.57716	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg19_v1_chr17_+_27920479_27920526	0.576134	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg19_v1_chr6_-_105850958_105850958	0.575597	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg19_v1_chr1_-_221910801_221910801	0.574932	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg19_v1_chr10_-_99393175_99393343	0.574769	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg19_v1_chr7_+_63773185_63773185	0.574567	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg19_v1_chr4_+_124317884_124318029	0.573655	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v1_chr3_-_48754589_48754710	0.573467	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg19_v1_chr1_-_208417635_208417664	0.573147	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg19_v1_chr5_+_137203544_137203548	0.572655	SOX2.p2	NM_001135940|MYOT|9499|myotilin	NM_006790|MYOT|9499|myotilin	AK300088|MYOT|9499|myotilin
hg19_v1_chr1_-_193155723_193155742	0.571644	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg19_v1_chr14_-_35182944_35183033	0.571123	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg19_v1_chr21_-_27512668_27512777	0.571068	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr1_+_209859524_209859524	0.569939	SOX2.p2	NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1	NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v1_chr16_+_15737123_15737123	0.568139	SOX2.p2	BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)
hg19_v1_chr4_-_15939949_15939972	0.566031	SOX2.p2	BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1	M60047|FGFBP1|9982|fibroblast growth factor binding protein 1	BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1	BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1	AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1
hg19_v1_chr16_+_8814567_8814593	0.565828	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr6_+_50681256_50681256	0.564063	SOX2.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg19_v1_chr18_+_63417487_63417487	0.56399	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg19_v1_chr10_-_127371593_127371712	0.563716	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg19_v1_chr4_-_106629803_106629880	0.56369	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg19_v1_chrX_-_105282714_105282745	0.563683	SOX2.p2	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
hg19_v1_chr10_+_72972268_72972493	0.561671	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg19_v1_chr12_+_50478942_50479032	0.561245	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr6_+_27777713_27777851	0.560864	SOX2.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg19_v1_chr3_-_62860561_62860703	0.560686	SOX2.p2	
hg19_v1_chr6_+_153019029_153019181	0.560663	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg19_v1_chr10_-_76868853_76868975	0.560451	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg19_v1_chrX_+_105937067_105937084	0.559967	SOX2.p2	BC036901|RNF128|79589|ring finger protein 128	NM_024539|RNF128|79589|ring finger protein 128	AK126553|RNF128|79589|ring finger protein 128
hg19_v1_chr14_-_55878537_55878575	0.559916	SOX2.p2	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg19_v1_chr15_+_90544608_90544770	0.559109	SOX2.p2	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg19_v1_chr2_-_55199894_55199922	0.558931	SOX2.p2	
hg19_v1_chr8_+_80523351_80523367	0.558726	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2
hg19_v1_chr4_+_54243810_54243821	0.558316	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr7_+_80267922_80267965	0.556618	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr12_-_71148063_71148236	0.556021	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr14_+_105941061_105941199	0.554438	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg19_v1_chr5_-_77844975_77845071	0.553449	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr12_-_102591547_102591613	0.553274	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg19_v1_chr19_+_45281125_45281187	0.552014	SOX2.p2	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c
hg19_v1_chr7_-_126883568_126883568	0.551815	SOX2.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr17_-_62657997_62658138	0.550643	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr3_+_9476506_9476527	0.550206	SOX2.p2	
hg19_v1_chr22_-_36236421_36236629	0.550012	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr1_-_153606567_153606567	0.549682	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr1_-_102462371_102462604	0.549288	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg19_v1_chr20_+_37209837_37209843	0.548657	SOX2.p2	BC029594|ADIG|149685|adipogenin	NM_001018082|ADIG|149685|adipogenin	BC119704|ADIG|149685|adipogenin	BC119705|ADIG|149685|adipogenin
hg19_v1_chr3_-_196242190_196242236	0.547602	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg19_v1_chr2_+_143886898_143886963	0.545353	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg19_v1_chr3_-_122283423_122283522	0.544822	SOX2.p2	AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9
hg19_v1_chr13_-_38443859_38443938	0.544053	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg19_v1_chr2_-_163008913_163008913	0.543598	SOX2.p2	NM_002054|GCG|2641|glucagon
hg19_v1_chr5_+_137203559_137203573	0.542941	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg19_v1_chr22_-_50523780_50523829	0.542056	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr20_+_44036940_44037106	0.541006	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr17_+_75283972_75283986	0.540636	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg19_v1_chr9_+_2622134_2622188	0.540547	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr12_+_49761161_49761628	0.540147	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg19_v1_chr7_-_27205148_27205160	0.538839	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg19_v1_chr2_+_26257384_26257550	0.537984	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg19_v1_chr17_-_63009302_63009310	0.537237	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg19_v1_chrX_+_150151757_150151857	0.536726	SOX2.p2	BX537505|HMGB3|3149|high mobility group box 3	NM_005342|HMGB3|3149|high mobility group box 3	Y10043|HMGB3|3149|high mobility group box 3	BC070482|HMGB3|3149|high mobility group box 3
hg19_v1_chr2_+_29038862_29038880	0.536446	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg19_v1_chr20_+_55108265_55108301	0.536183	SOX2.p2	BC014951|FAM209B|388799|family with sequence similarity 209, member B	NM_001013646|FAM209B|388799|family with sequence similarity 209, member B
hg19_v1_chr2_+_74120132_74120143	0.53589	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chrX_+_118714297_118714297	0.535406	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A
hg19_v1_chr1_-_154155637_154155640	0.534433	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3
hg19_v1_chr2_-_110873638_110873650	0.534268	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr2_+_201676597_201676632	0.534122	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr4_+_88896838_88896866	0.532737	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr5_+_72112417_72112564	0.53249	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg19_v1_chr15_-_83876165_83876664	0.531193	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr10_+_63661012_63661012	0.530866	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg19_v1_chr8_-_23261675_23261721	0.530341	SOX2.p2	NM_002318|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chrX_-_49965657_49965663	0.528837	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg19_v1_chr3_+_132757216_132757252	0.527982	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg19_v1_chr6_-_17987693_17987827	0.527736	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A
hg19_v1_chr1_-_11751677_11751706	0.527682	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg19_v1_chr19_+_18062110_18062110	0.524602	SOX2.p2	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
hg19_v1_chr2_+_201676644_201676648	0.5235	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr12_+_50479033_50479194	0.523491	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr2_+_181845803_181845852	0.523132	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr3_+_111261039_111261095	0.523036	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg19_v1_chr8_+_80523304_80523313	0.522954	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg19_v1_chr1_-_114414245_114414374	0.522404	SOX2.p2	JN084012|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg19_v1_chr7_+_141811508_141811570	0.521432	SOX2.p2	AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene	BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene	BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene
hg19_v1_chr1_+_39875175_39875175	0.52039	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg19_v1_chr8_+_1449531_1449568	0.519519	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg19_v1_chr14_-_60097314_60097374	0.519095	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr12_-_106641675_106642020	0.517031	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg19_v1_chr11_+_69455978_69456081	0.516724	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg19_v1_chr3_+_159557649_159557738	0.516245	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr14_-_60097223_60097308	0.515454	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chr5_-_179044835_179044916	0.515014	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr11_-_72385411_72385496	0.51472	SOX2.p2	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr14_-_102976096_102976133	0.514407	SOX2.p2	BX161460|ANKRD9|122416|ankyrin repeat domain 9	NM_152326|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr20_-_17511973_17512012	0.513973	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr10_+_97803064_97803699	0.513164	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr3_-_71179715_71179732	0.512939	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg19_v1_chr17_-_76921205_76921452	0.512745	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr1_-_154155636_154155636	0.511083	SOX2.p2	BC000771|TPM3|7170|tropomyosin 3
hg19_v1_chr3_-_120169493_120170182	0.510976	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg19_v1_chrX_+_107683015_107683153	0.51085	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr14_-_88793250_88793255	0.510822	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr2_+_74120092_74120111	0.510775	SOX2.p2	NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr15_+_39542884_39542966	0.508939	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg19_v1_chrX_+_12994286_12994400	0.50826	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr17_-_38210888_38210888	0.506847	SOX2.p2	NM_001079518|MED24|9862|mediator complex subunit 24	NM_014815|MED24|9862|mediator complex subunit 24
hg19_v1_chr20_+_30102237_30102260	0.506628	SOX2.p2	NM_030789|HM13|81502|histocompatibility (minor) 13	NM_178580|HM13|81502|histocompatibility (minor) 13	NM_178581|HM13|81502|histocompatibility (minor) 13	NM_178582|HM13|81502|histocompatibility (minor) 13	AK314410|HM13|81502|histocompatibility (minor) 13	BC008938|HM13|81502|histocompatibility (minor) 13	BC008959|HM13|81502|histocompatibility (minor) 13	AY169310|HM13|81502|histocompatibility (minor) 13	AY169311|HM13|81502|histocompatibility (minor) 13	AY169312|HM13|81502|histocompatibility (minor) 13	AK075283|HM13|81502|histocompatibility (minor) 13	DQ168450|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr5_-_39394423_39394520	0.506112	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chrX_-_138724851_138724999	0.505605	SOX2.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg19_v1_chrX_+_152954965_152954965	0.503515	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg19_v1_chr1_-_168105902_168105938	0.503392	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr20_-_2641476_2641596	0.502977	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr5_+_170736287_170736369	0.502768	SOX2.p2	BC017291|TLX3|30012|T-cell leukemia homeobox 3	NM_021025|TLX3|30012|T-cell leukemia homeobox 3	DQ892654|TLX3|30012|T-cell leukemia homeobox 3	DQ895893|TLX3|30012|T-cell leukemia homeobox 3	DQ896085|TLX3|30012|T-cell leukemia homeobox 3
hg19_v1_chr17_+_27369917_27369917	0.501589	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr20_+_44258384_44258418	0.501403	SOX2.p2	AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A	NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A	BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A
hg19_v1_chr7_-_99698993_99699029	0.500015	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr11_+_62432778_62432812	0.499607	SOX2.p2	NM_001043229|METTL12|751071|methyltransferase like 12	AK297138|METTL12|751071|methyltransferase like 12	BC041359|METTL12|751071|methyltransferase like 12
hg19_v1_chr7_-_99699030_99699045	0.49955	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr1_+_155178489_155178587	0.498939	SOX2.p2	NM_002455|MTX1|4580|metaxin 1	NM_198883|MTX1|4580|metaxin 1	AK313863|MTX1|4580|metaxin 1	BC001906|MTX1|4580|metaxin 1
hg19_v1_chr20_-_18810838_18810838	0.498516	SOX2.p2	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496
hg19_v1_chr13_+_39612440_39612631	0.498198	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3
hg19_v1_chr17_+_39411635_39411635	0.497805	SOX2.p2	NM_030975|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr1_+_82266081_82266081	0.497508	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr4_+_77953942_77954068	0.496928	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg19_v1_chr2_-_106810756_106810760	0.496496	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr11_-_5323174_5323175	0.494831	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg19_v1_chr16_-_89007605_89007607	0.493552	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v1_chr22_-_50523737_50523742	0.492556	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr8_+_55528626_55528679	0.491718	SOX2.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg19_v1_chr20_-_44006876_44007032	0.491365	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg19_v1_chr1_-_154155658_154155658	0.489996	SOX2.p2	BC073144|TPM3|7170|tropomyosin 3
hg19_v1_chr8_+_70405027_70405051	0.489177	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg19_v1_chr1_+_81771844_81772011	0.488695	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr1_+_202163117_202163232	0.488184	SOX2.p2	NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v1_chr20_+_42965625_42965625	0.487561	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg19_v1_chr15_+_71433787_71433833	0.487258	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg19_v1_chr21_+_41239346_41239408	0.487096	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg19_v1_chr1_-_75199091_75199091	0.48607	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg19_v1_chr19_+_10765106_10765230	0.484594	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr1_-_154155664_154155666	0.484411	SOX2.p2	AK026559|TPM3|7170|tropomyosin 3	AK092712|TPM3|7170|tropomyosin 3
hg19_v1_chr12_-_8815370_8815432	0.484217	SOX2.p2	U37283|MFAP5|8076|microfibrillar associated protein 5	NM_003480|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr14_+_57857261_57857305	0.483932	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v1_chr3_+_159557745_159557973	0.483878	SOX2.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr11_-_18062304_18062334	0.483789	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg19_v1_chrY_+_20137666_20137693	0.482392	SOX2.p2	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr6_+_34204690_34204721	0.482081	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr5_-_88119604_88119743	0.481438	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr6_-_105850765_105850927	0.481091	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg19_v1_chr1_+_40713572_40713639	0.480337	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg19_v1_chr14_-_69354900_69354979	0.479398	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg19_v1_chr7_+_39663257_39663359	0.479241	SOX2.p2	AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr5_-_95018659_95018713	0.478895	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg19_v1_chr1_-_202113698_202113850	0.478694	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr15_-_65398578_65398696	0.477674	SOX2.p2	BC127916|UBAP1L|390595|ubiquitin associated protein 1-like	NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like
hg19_v1_chr1_-_154155646_154155657	0.477545	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg19_v1_chr1_-_202113855_202113866	0.475643	SOX2.p2	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr18_+_32398225_32398411	0.474722	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr7_-_148725764_148725781	0.474257	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr7_-_92462637_92462897	0.474162	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg19_v1_chr17_-_29648631_29648766	0.474053	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg19_v1_chr1_-_622033_622052	0.473717	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg19_v1_chr7_-_66460403_66460598	0.472637	SOX2.p2	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg19_v1_chr18_+_72201669_72201702	0.472262	SOX2.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chrX_-_130423199_130423326	0.471721	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr10_-_105110844_105110876	0.470131	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr5_+_15500288_15500310	0.469995	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr11_+_65408387_65408419	0.46971	SOX2.p2	
hg19_v1_chr7_-_106301329_106301678	0.469253	SOX2.p2	AK093350|C7orf74|168455|chromosome 7 open reading frame 74	BC013906|C7orf74|168455|chromosome 7 open reading frame 74	NM_175884|C7orf74|168455|chromosome 7 open reading frame 74
hg19_v1_chr18_+_66465316_66465369	0.468769	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr15_-_50411405_50411527	0.468746	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg19_v1_chr5_+_132406080_132406126	0.468297	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr7_-_148580600_148580626	0.468128	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr1_-_149889362_149889446	0.467991	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr9_+_2622099_2622126	0.467799	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr19_-_39303739_39303739	0.466742	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr8_-_86253863_86253942	0.466725	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg19_v1_chr15_+_93443418_93443555	0.465799	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr2_-_200325200_200325283	0.465512	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr11_-_130184314_130184349	0.465337	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg19_v1_chr7_+_73498106_73498146	0.464822	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr22_-_36236330_36236351	0.461808	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr22_+_21986968_21987085	0.461055	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg19_v1_chr12_-_81331487_81331693	0.458709	SOX2.p2	CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)	BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)	AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)	BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)	BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)	BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)	BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)	AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)	AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)	NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)
hg19_v1_chr12_-_16758839_16758903	0.457916	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr2_+_228356287_228356295	0.457811	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr7_-_27142301_27142393	0.457629	SOX2.p2	AK096742|HOXA2|3199|homeobox A2	NM_006735|HOXA2|3199|homeobox A2
hg19_v1_chr15_-_41836458_41836471	0.456489	SOX2.p2	AK022794|RPAP1|26015|RNA polymerase II associated protein 1	NM_015540|RPAP1|26015|RNA polymerase II associated protein 1	AK308884|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr6_-_48078909_48078942	0.456143	SOX2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg19_v1_chr2_-_198175458_198175488	0.454746	SOX2.p2	BC063622|ANKRD44|91526|ankyrin repeat domain 44
hg19_v1_chr17_-_43510204_43510250	0.454624	SOX2.p2	AK290650|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr14_-_60097531_60097536	0.454587	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr17_+_19030781_19030781	0.454235	SOX2.p2	BC157869|GRAPL|400581|GRB2-related adaptor protein-like	NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like
hg19_v1_chr16_-_10788729_10788801	0.453429	SOX2.p2	HQ258441|TEKT5|146279|tektin 5	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg19_v1_chr4_+_88896801_88896819	0.453293	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr6_+_41040687_41040712	0.452648	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr15_+_72766665_72766670	0.45216	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr9_-_34620499_34620533	0.451649	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr11_-_78052925_78052925	0.451399	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chr15_+_77287688_77287725	0.45085	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr19_+_4402658_4402775	0.44999	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chrX_+_15525430_15525430	0.449085	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr9_+_15422630_15422786	0.44804	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chrX_-_41782230_41782421	0.447095	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v1_chr4_+_39699663_39699946	0.446995	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K
hg19_v1_chr5_-_147286064_147286100	0.445552	SOX2.p2	AY358656|C5orf46|389336|chromosome 5 open reading frame 46	AK289403|C5orf46|389336|chromosome 5 open reading frame 46	BC021680|C5orf46|389336|chromosome 5 open reading frame 46	NM_206966|C5orf46|389336|chromosome 5 open reading frame 46
hg19_v1_chr20_-_13971256_13971261	0.445112	SOX2.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v1_chr19_-_1111972_1112003	0.444946	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg19_v1_chr18_-_22932109_22932217	0.444008	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr2_+_153191830_153192116	0.443717	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg19_v1_chr16_+_31494438_31494438	0.44317	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg19_v1_chr2_+_37571752_37571874	0.443115	SOX2.p2	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase
hg19_v1_chr17_-_39471944_39471946	0.443064	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg19_v1_chr15_+_59908724_59908787	0.442207	SOX2.p2	AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr2_-_152590983_152591000	0.441513	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg19_v1_chr10_-_64028457_64028621	0.441038	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg19_v1_chr6_-_127840499_127840499	0.440369	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg19_v1_chr3_+_135741576_135741660	0.440042	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr3_-_164796275_164796282	0.439245	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr15_-_40633122_40633167	0.439059	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg19_v1_chr1_-_21113758_21113796	0.437928	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr5_-_158526698_158526787	0.436839	SOX2.p2	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg19_v1_chr1_+_155179005_155179047	0.436656	SOX2.p2	BC035616|MTX1|4580|metaxin 1	AX775989|MTX1|4580|metaxin 1
hg19_v1_chr1_+_115572414_115572414	0.436581	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg19_v1_chr8_+_9911797_9911961	0.436485	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr7_+_77469446_77469572	0.435954	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr1_-_116383692_116383748	0.434678	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr19_+_1026608_1026612	0.433996	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg19_v1_chr3_-_112359863_112359904	0.433716	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr5_-_134871638_134871655	0.433677	SOX2.p2	BC008687|NEUROG1|4762|neurogenin 1	BC028226|NEUROG1|4762|neurogenin 1	NM_006161|NEUROG1|4762|neurogenin 1	AB593107|NEUROG1|4762|neurogenin 1
hg19_v1_chr4_-_164253946_164253946	0.43252	SOX2.p2	NM_000909|NPY1R|4886|neuropeptide Y receptor Y1
hg19_v1_chr1_+_74701070_74701135	0.431589	SOX2.p2	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AF116826|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase	HQ258528|TNNI3K|51086|TNNI3 interacting kinase
hg19_v1_chr13_-_75901897_75901948	0.431492	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr5_-_172755195_172755329	0.431415	SOX2.p2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg19_v1_chr1_-_240775448_240775461	0.430831	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg19_v1_chr1_+_6684924_6684924	0.430769	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr1_+_151739130_151739191	0.430293	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg19_v1_chr3_-_151034514_151034635	0.428572	SOX2.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg19_v1_chr11_+_112832089_112832174	0.427866	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr9_-_16727887_16727908	0.426928	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg19_v1_chrX_-_54824672_54824672	0.426687	SOX2.p2	AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6	NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6
hg19_v1_chr4_+_88896899_88896928	0.425573	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr18_+_29078026_29078260	0.425461	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg19_v1_chr9_+_137004913_137004996	0.425437	SOX2.p2	AJ011376|WDR5|11091|WD repeat domain 5	NM_052821|WDR5|11091|WD repeat domain 5
hg19_v1_chr6_-_32163890_32163924	0.424616	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg19_v1_chr3_-_196911001_196911001	0.424413	SOX2.p2	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)
hg19_v1_chr4_-_76598558_76598562	0.424366	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr7_-_99699426_99699566	0.424161	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chrX_-_18690187_18690222	0.424094	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr6_+_26251826_26251878	0.42319	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr1_-_102462789_102462792	0.423051	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg19_v1_chr12_-_31743822_31744014	0.422659	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg19_v1_chr18_+_3447607_3447627	0.421963	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chrX_-_135962872_135962916	0.421762	SOX2.p2	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr10_+_98064084_98064252	0.419681	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg19_v1_chr17_+_38375554_38375674	0.419337	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg19_v1_chr1_-_173174611_173174696	0.418856	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg19_v1_chr7_-_86595203_86595290	0.418024	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr17_-_26697358_26697372	0.417737	SOX2.p2	NM_000638|VTN|7448|vitronectin
hg19_v1_chr2_+_176964529_176964529	0.415652	SOX2.p2	BC069088|HOXD12|3238|homeobox D12	BC121103|HOXD12|3238|homeobox D12	BC121104|HOXD12|3238|homeobox D12	NM_021193|HOXD12|3238|homeobox D12
hg19_v1_chr20_+_30102261_30102302	0.415441	SOX2.p2	AF172086|HM13|81502|histocompatibility (minor) 13	BC062595|HM13|81502|histocompatibility (minor) 13	AF483215|HM13|81502|histocompatibility (minor) 13	AJ345029|HM13|81502|histocompatibility (minor) 13	AK074686|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr12_+_9142136_9142231	0.415252	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg19_v1_chr3_+_182971213_182971343	0.415201	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr1_+_1072274_1072396	0.414902	SOX2.p2	BC028014|LOC254099|254099|uncharacterized LOC254099
hg19_v1_chr3_+_122044010_122044139	0.414395	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg19_v1_chr20_+_44036628_44036628	0.413529	SOX2.p2	NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr13_+_52586516_52586554	0.413426	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg19_v1_chr7_+_151653463_151653533	0.412521	SOX2.p2	NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
hg19_v1_chr1_+_66797775_66797932	0.412271	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr5_+_34839268_34839327	0.412193	SOX2.p2	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like	NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like
hg19_v1_chr3_-_167191808_167191833	0.41168	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr15_+_40453263_40453421	0.411591	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr9_+_36036900_36036994	0.410545	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v1_chr15_+_74165967_74166050	0.410075	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg19_v1_chr11_+_57529233_57529445	0.409358	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chr17_-_56160564_56160670	0.408486	SOX2.p2	
hg19_v1_chr21_-_40685545_40685593	0.407926	SOX2.p2	BC064602|BRWD1|54014|bromodomain and WD repeat domain containing 1	BC142986|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr9_-_73483933_73483988	0.407284	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg19_v1_chr16_+_67063035_67063059	0.406278	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr3_+_25469749_25469769	0.405204	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr9_-_21305311_21305311	0.404978	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr2_-_134326030_134326047	0.404692	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr22_+_44576769_44576856	0.404686	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg19_v1_chr19_-_1567875_1568056	0.403817	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr15_+_40453209_40453250	0.402529	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chrX_+_152912655_152912826	0.402268	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr1_+_9711781_9711828	0.402232	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg19_v1_chr7_+_37723378_37723386	0.402129	SOX2.p2	
hg19_v1_chr18_-_51690988_51690996	0.401339	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr19_+_7660698_7660944	0.401268	SOX2.p2	BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3
hg19_v1_chr9_+_117904096_117904096	0.401242	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg19_v1_chr22_-_42336222_42336222	0.400364	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chr18_-_48724031_48724050	0.399964	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chrX_+_44703248_44703378	0.399544	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg19_v1_chr22_-_41682169_41682183	0.399176	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr11_+_13690230_13690244	0.398326	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr3_+_182970853_182971044	0.397976	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr16_-_46865039_46865137	0.397928	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg19_v1_chr3_-_42917191_42917469	0.397862	SOX2.p2	AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1
hg19_v1_chr7_+_80267972_80268035	0.397851	SOX2.p2	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr1_-_27930101_27930142	0.397143	SOX2.p2	NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1
hg19_v1_chr1_+_67632168_67632168	0.395071	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg19_v1_chr6_+_56954801_56954828	0.39434	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg19_v1_chr8_+_7693992_7693992	0.394323	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg19_v1_chrX_-_135962929_135962942	0.393727	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr7_-_27213873_27213954	0.393009	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg19_v1_chr18_+_3449972_3450188	0.392489	SOX2.p2	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr5_-_127873734_127873949	0.392321	SOX2.p2	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2
hg19_v1_chr11_-_125550674_125550792	0.392136	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1
hg19_v1_chr13_-_25496913_25497026	0.391859	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg19_v1_chr12_-_52886971_52887180	0.391684	SOX2.p2	BT006899|KRT6A|3853|keratin 6A	BC125058|KRT6A|3853|keratin 6A	BC139753|KRT6A|3853|keratin 6A	DQ890619|KRT6A|3853|keratin 6A	DQ893788|KRT6A|3853|keratin 6A	BC069269|KRT6A|3853|keratin 6A	BC008807|KRT6A|3853|keratin 6A	BC014152|KRT6A|3853|keratin 6A	AK299386|KRT6A|3853|keratin 6A	AK299428|KRT6A|3853|keratin 6A	AK301686|KRT6A|3853|keratin 6A	AK290245|KRT6A|3853|keratin 6A	NM_005554|KRT6A|3853|keratin 6A
hg19_v1_chrX_+_79675945_79675979	0.391601	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg19_v1_chr6_+_47749774_47749802	0.391577	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5	HQ258199|OPN5|221391|opsin 5
hg19_v1_chr7_+_102553343_102553521	0.391043	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg19_v1_chr14_-_23904849_23904870	0.390577	SOX2.p2	M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta
hg19_v1_chrX_+_70503041_70503041	0.389765	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr16_+_67063214_67063363	0.38957	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr4_+_57774365_57774509	0.389275	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg19_v1_chr10_-_103540125_103540125	0.388807	SOX2.p2	NM_001206389|FGF8|2253|fibroblast growth factor 8 (androgen-induced)
hg19_v1_chr9_+_115631814_115631917	0.38874	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg19_v1_chr17_-_48072566_48072590	0.388391	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg19_v1_chr12_+_50898744_50898767	0.38838	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v1_chr10_+_45496272_45496382	0.388084	SOX2.p2	NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)
hg19_v1_chr6_+_43737937_43738099	0.387922	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_001204384|VEGFA|7422|vascular endothelial growth factor A	NM_001204385|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr8_-_110346272_110346470	0.38695	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg19_v1_chr14_+_70918873_70918873	0.386883	SOX2.p2	NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21
hg19_v1_chr5_+_147648374_147648422	0.386417	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr5_+_54398473_54398510	0.385578	SOX2.p2	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg19_v1_chr22_+_21271940_21272066	0.385169	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chrX_-_15872921_15872937	0.384499	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chrX_+_48916515_48916551	0.384376	SOX2.p2	BC008769|CCDC120|90060|coiled-coil domain containing 120	NM_001163322|CCDC120|90060|coiled-coil domain containing 120	NM_033626|CCDC120|90060|coiled-coil domain containing 120	NM_001163321|CCDC120|90060|coiled-coil domain containing 120	NM_001163323|CCDC120|90060|coiled-coil domain containing 120	AK315837|CCDC120|90060|coiled-coil domain containing 120	AK294024|CCDC120|90060|coiled-coil domain containing 120	AK300366|CCDC120|90060|coiled-coil domain containing 120	AK293898|CCDC120|90060|coiled-coil domain containing 120
hg19_v1_chr21_-_31869427_31869471	0.383863	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	HQ258034|KRTAP19-4|337971|keratin associated protein 19-4	HQ258698|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg19_v1_chr12_+_20848288_20848702	0.383773	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr4_-_76598611_76598693	0.383761	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr5_-_148442606_148442736	0.383652	SOX2.p2	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2
hg19_v1_chr17_-_41739261_41739289	0.383177	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr6_+_4776826_4777016	0.382691	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg19_v1_chr2_-_107502609_107502630	0.381973	SOX2.p2	AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v1_chr17_+_66031814_66031866	0.381877	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chrX_+_78003205_78003212	0.381724	SOX2.p2	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4	AK314134|LPAR4|2846|lysophosphatidic acid receptor 4
hg19_v1_chrX_+_128674181_128674416	0.381387	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr5_-_136834887_136835074	0.380382	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v1_chr19_-_42806928_42806954	0.3799	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr9_-_123689172_123689172	0.379423	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg19_v1_chr12_-_22089627_22089627	0.379375	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v1_chr1_+_10459084_10459174	0.37934	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr2_-_180427314_180427314	0.37922	SOX2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg19_v1_chr2_+_173420873_173420878	0.378729	SOX2.p2	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg19_v1_chr5_-_147211141_147211199	0.378727	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg19_v1_chr10_-_735522_735861	0.37814	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v1_chr4_+_71263598_71263692	0.377925	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg19_v1_chr19_+_41869848_41869870	0.377737	SOX2.p2	NM_001098825|TMEM91|641649|transmembrane protein 91
hg19_v1_chr19_+_11071583_11071709	0.377466	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr12_-_50595303_50595315	0.377419	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr18_-_74728963_74729028	0.376523	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr9_+_15422875_15422949	0.376116	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr20_+_58630965_58631025	0.375944	SOX2.p2	AK091179|C20orf197|284756|chromosome 20 open reading frame 197	NM_173644|C20orf197|284756|chromosome 20 open reading frame 197
hg19_v1_chr8_+_22210311_22210342	0.375919	SOX2.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg19_v1_chr4_-_76598289_76598344	0.37537	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr1_+_198608136_198608210	0.374228	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr12_-_11036815_11036873	0.373973	SOX2.p2	BC128192|PRH1|5554|proline-rich protein HaeIII subfamily 1	BC133676|PRH1|5554|proline-rich protein HaeIII subfamily 1	K03203|PRH1|5554|proline-rich protein HaeIII subfamily 1	NM_006250|PRH1|5554|proline-rich protein HaeIII subfamily 1
hg19_v1_chr5_+_69321071_69321259	0.373729	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr3_-_42917632_42917632	0.373465	SOX2.p2	NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1
hg19_v1_chr12_-_58146118_58146229	0.373361	SOX2.p2	BC005864|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr4_-_155412867_155412947	0.373342	SOX2.p2	AK127704|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr11_+_450260_450333	0.373134	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr12_-_16757944_16758080	0.372417	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr11_-_10673832_10673922	0.372186	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr16_+_21689834_21689837	0.371879	SOX2.p2	BC129993|OTOA|146183|otoancorin	NM_144672|OTOA|146183|otoancorin	BC129992|OTOA|146183|otoancorin
hg19_v1_chr12_-_11463353_11463368	0.371574	SOX2.p2	BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4	BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4	K03207|PRB4|5545|proline-rich protein BstNI subfamily 4	NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4	BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4
hg19_v1_chr12_-_99548471_99548644	0.371415	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr15_+_94841429_94841494	0.371384	SOX2.p2	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2	NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2	AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2	BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2
hg19_v1_chr20_-_14318200_14318312	0.37124	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg19_v1_chr14_-_105444693_105444723	0.371154	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr10_+_86131546_86131691	0.371067	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg19_v1_chr6_-_155777036_155777036	0.370934	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg19_v1_chr2_+_166428845_166428854	0.370752	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr22_+_38598065_38598107	0.370663	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr17_-_29624249_29624379	0.370573	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg19_v1_chr11_-_112034671_112034846	0.370535	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg19_v1_chr20_-_29993955_29994068	0.370351	SOX2.p2	HQ258031|DEFB121|245934|defensin, beta 121	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg19_v1_chr4_-_155412411_155412554	0.369761	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr11_-_6817013_6817138	0.369595	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg19_v1_chr4_+_76649739_76649790	0.368658	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr13_-_103719195_103719195	0.368558	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg19_v1_chr1_-_207143944_207143969	0.368518	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg19_v1_chr21_-_31859666_31859754	0.36844	SOX2.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg19_v1_chr1_+_86889768_86889930	0.367792	SOX2.p2	NM_006536|CLCA2|9635|chloride channel accessory 2	AF043977|CLCA2|9635|chloride channel accessory 2	AK290348|CLCA2|9635|chloride channel accessory 2	AK307937|CLCA2|9635|chloride channel accessory 2	BC041096|CLCA2|9635|chloride channel accessory 2	AB026833|CLCA2|9635|chloride channel accessory 2	AF127980|CLCA2|9635|chloride channel accessory 2
hg19_v1_chr6_+_83073954_83074000	0.367704	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr2_-_172290435_172290618	0.366499	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg19_v1_chr1_+_22328148_22328166	0.366176	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg19_v1_chr5_-_147211235_147211259	0.366169	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg19_v1_chr7_+_129906702_129906727	0.3658	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg19_v1_chrX_-_118726852_118727112	0.365791	SOX2.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr15_-_99789585_99789827	0.365774	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr5_+_140566655_140566893	0.365372	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg19_v1_chr17_+_77751929_77752033	0.365322	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg19_v1_chr14_-_105531739_105531758	0.365202	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr17_-_27045172_27045285	0.364488	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg19_v1_chr22_-_39151457_39151472	0.364365	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2	NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2
hg19_v1_chr19_+_11649578_11649740	0.364272	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle
hg19_v1_chr19_+_16244837_16244837	0.363383	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg19_v1_chr6_-_33754712_33754718	0.363226	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg19_v1_chr18_+_21719447_21719450	0.36319	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v1_chr18_-_19997773_19997877	0.362919	SOX2.p2	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1
hg19_v1_chr10_+_52750904_52750911	0.362482	SOX2.p2	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chr17_+_27370155_27370243	0.361399	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr12_-_70093064_70093195	0.36124	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg19_v1_chr3_-_69171536_69171745	0.360941	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg19_v1_chr11_-_3013577_3013622	0.359442	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr11_-_35441099_35441107	0.359438	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr12_-_11184005_11184005	0.35905	SOX2.p2	NM_176885|TAS2R31|259290|taste receptor, type 2, member 31
hg19_v1_chr10_-_105110890_105110897	0.359045	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr12_-_108154908_108154913	0.358985	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg19_v1_chr4_+_54243909_54244009	0.358971	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr3_+_185303961_185304206	0.358578	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v1_chr12_+_6603258_6603274	0.357832	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr21_+_40177847_40177907	0.357282	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg19_v1_chr1_+_10509775_10509775	0.357196	SOX2.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chr9_-_127269689_127269719	0.357031	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg19_v1_chr12_-_99288502_99288673	0.35656	SOX2.p2	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr13_+_34392254_34392315	0.356335	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr16_-_30103204_30103290	0.356319	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr12_-_54653369_54653373	0.35503	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chr2_-_211179765_211179913	0.354775	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg19_v1_chr7_+_115850546_115850760	0.354531	SOX2.p2	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg19_v1_chr21_+_27107522_27107531	0.354005	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr19_+_11071792_11071856	0.353511	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr11_+_67007488_67007678	0.353439	SOX2.p2	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A	AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A
hg19_v1_chr12_-_58146025_58146107	0.353348	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr4_-_76598563_76598596	0.353242	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr12_-_28122884_28123047	0.352976	SOX2.p2	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	M26960|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr4_+_1873149_1873247	0.352244	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr13_-_39612246_39612261	0.352233	SOX2.p2	NM_025138|PROSER1|80209|proline and serine rich 1	NM_170719|PROSER1|80209|proline and serine rich 1
hg19_v1_chr6_+_43738394_43738674	0.352058	SOX2.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr12_+_54378929_54379043	0.352051	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg19_v1_chr12_-_7596722_7596752	0.351972	SOX2.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg19_v1_chr1_+_200708604_200708738	0.351699	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr5_-_137848517_137848590	0.351564	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg19_v1_chr12_-_91452130_91452130	0.351214	SOX2.p2	NM_007035|KERA|11081|keratocan
hg19_v1_chrX_-_11284094_11284123	0.351053	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr7_-_21985421_21985543	0.350517	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg19_v1_chr20_+_20037289_20037351	0.350349	SOX2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg19_v1_chr17_-_33390676_33390758	0.349914	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg19_v1_chrY_-_19882311_19882439	0.349804	SOX2.p2	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked
hg19_v1_chr7_+_100331248_100331248	0.349142	SOX2.p2	AF332975|ZAN|7455|zonadhesin	AF332976|ZAN|7455|zonadhesin	AF332977|ZAN|7455|zonadhesin	AF332978|ZAN|7455|zonadhesin	AF332979|ZAN|7455|zonadhesin	AF332980|ZAN|7455|zonadhesin	NM_003386|ZAN|7455|zonadhesin	NM_173059|ZAN|7455|zonadhesin
hg19_v1_chr5_-_150326105_150326142	0.348725	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg19_v1_chr12_+_6603291_6603297	0.348637	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr17_-_29641068_29641074	0.348583	SOX2.p2	AK312822|EVI2B|2124|ecotropic viral integration site 2B
hg19_v1_chr7_-_32110979_32111044	0.348294	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v1_chr18_-_3874688_3874766	0.347899	SOX2.p2	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr8_+_11660207_11660269	0.347831	SOX2.p2	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr10_-_105110823_105110842	0.347551	SOX2.p2	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr11_-_27681195_27681195	0.347382	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr21_+_37442221_37442285	0.346905	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1
hg19_v1_chr12_-_10573041_10573193	0.346809	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg19_v1_chr17_-_42908178_42908178	0.346385	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg19_v1_chr17_-_39280377_39280418	0.346285	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg19_v1_chr5_+_86564146_86564164	0.345182	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr7_+_73498149_73498162	0.34503	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1
hg19_v1_chrX_+_41306686_41306712	0.34472	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg19_v1_chr1_+_181002560_181002560	0.34449	SOX2.p2	NM_001194999|MR1|3140|major histocompatibility complex, class I-related	NM_001195000|MR1|3140|major histocompatibility complex, class I-related	NM_001195035|MR1|3140|major histocompatibility complex, class I-related	NM_001531|MR1|3140|major histocompatibility complex, class I-related
hg19_v1_chr16_-_15835382_15835512	0.344407	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg19_v1_chr19_-_42806460_42806861	0.344324	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr8_-_7681359_7681411	0.343539	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg19_v1_chr20_+_17207680_17207950	0.34338	SOX2.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chrX_+_30233674_30233692	0.343296	SOX2.p2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2
hg19_v1_chr21_-_32185560_32185569	0.343195	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg19_v1_chr21_+_37442298_37442413	0.342881	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr15_+_66694216_66694219	0.342357	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg19_v1_chr4_+_113970784_113970884	0.342287	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr4_-_113437327_113437337	0.341826	SOX2.p2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg19_v1_chr9_-_91267004_91267074	0.341559	SOX2.p2	BC101432|LOC286238|286238|uncharacterized LOC286238	BC101439|LOC286238|286238|uncharacterized LOC286238	BC101440|LOC286238|286238|uncharacterized LOC286238	BC101442|LOC286238|286238|uncharacterized LOC286238	AK098532|LOC286238|286238|uncharacterized LOC286238	NM_001100111|LOC286238|286238|uncharacterized LOC286238
hg19_v1_chr12_-_71003622_71003623	0.341038	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg19_v1_chr16_-_20702577_20702577	0.341029	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg19_v1_chrX_+_41192650_41192650	0.340909	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr19_+_11071713_11071718	0.3409	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr6_-_26199439_26199520	0.340827	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg19_v1_chr7_+_20370724_20370745	0.340739	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg19_v1_chr4_+_15429628_15429667	0.340575	SOX2.p2	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr8_-_23261626_23261631	0.340002	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr17_-_39324423_39324423	0.339858	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg19_v1_chr5_+_169010637_169010806	0.339517	SOX2.p2	NM_017785|CCDC99|54908|coiled-coil domain containing 99	AK304623|CCDC99|54908|coiled-coil domain containing 99	AF269167|CCDC99|54908|coiled-coil domain containing 99	AK310442|CCDC99|54908|coiled-coil domain containing 99	AK308835|CCDC99|54908|coiled-coil domain containing 99	BC012568|CCDC99|54908|coiled-coil domain containing 99	AY517557|CCDC99|54908|coiled-coil domain containing 99
hg19_v1_chr2_+_31456879_31456964	0.339503	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr8_+_7345190_7345242	0.338694	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg19_v1_chrX_-_1331526_1331642	0.338445	SOX2.p2	AB052639|CRLF2|64109|cytokine receptor-like factor 2	AF338733|CRLF2|64109|cytokine receptor-like factor 2	AY775789|CRLF2|64109|cytokine receptor-like factor 2	NM_001012288|CRLF2|64109|cytokine receptor-like factor 2	AF142570|CRLF2|64109|cytokine receptor-like factor 2	NM_022148|CRLF2|64109|cytokine receptor-like factor 2	AK026800|CRLF2|64109|cytokine receptor-like factor 2	AK223303|CRLF2|64109|cytokine receptor-like factor 2
hg19_v1_chr15_-_76304762_76304784	0.338355	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg19_v1_chr17_-_44895962_44896081	0.337463	SOX2.p2	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3	BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3	AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3	NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3
hg19_v1_chr2_-_211168315_211168338	0.336519	SOX2.p2	X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg19_v1_chr1_+_11539177_11539294	0.336323	SOX2.p2	AB593117|PTCHD2|57540|patched domain containing 2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg19_v1_chr20_+_61448391_61448416	0.33627	SOX2.p2	BC011705|COL9A3|1299|collagen, type IX, alpha 3	NM_001853|COL9A3|1299|collagen, type IX, alpha 3	DQ892946|COL9A3|1299|collagen, type IX, alpha 3	DQ896194|COL9A3|1299|collagen, type IX, alpha 3	L41162|COL9A3|1299|collagen, type IX, alpha 3
hg19_v1_chr8_+_21777165_21777214	0.335824	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr17_+_39382878_39382907	0.335376	SOX2.p2	BC117287|KRTAP9-2|83899|keratin associated protein 9-2	BC110619|KRTAP9-2|83899|keratin associated protein 9-2	AJ406946|KRTAP9-2|83899|keratin associated protein 9-2	NM_031961|KRTAP9-2|83899|keratin associated protein 9-2	BC069560|KRTAP9-2|83899|keratin associated protein 9-2
hg19_v1_chr14_-_105531764_105531783	0.334423	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132	AX775935|GPR132|29933|G protein-coupled receptor 132	AX775841|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr6_+_56954985_56955008	0.333814	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg19_v1_chr15_-_33360084_33360387	0.333314	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr9_-_36400817_36400977	0.333182	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr6_+_80714321_80714383	0.331842	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	AX775733|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg19_v1_chr3_+_57094468_57094539	0.331607	SOX2.p2	AY221117|SPATA12|353324|spermatogenesis associated 12	NM_181727|SPATA12|353324|spermatogenesis associated 12	BC126274|SPATA12|353324|spermatogenesis associated 12	BC136498|SPATA12|353324|spermatogenesis associated 12
hg19_v1_chr3_-_50360109_50360280	0.331589	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr22_-_50524357_50524357	0.32987	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr11_-_126081532_126081586	0.329492	SOX2.p2	AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4
hg19_v1_chrX_+_54947228_54947287	0.329218	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chr1_-_167487701_167487846	0.328795	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg19_v1_chr4_+_90033967_90033967	0.327951	SOX2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg19_v1_chr4_+_102734982_102735035	0.327882	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg19_v1_chr1_-_178840079_178840214	0.327065	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg19_v1_chr6_+_83073501_83073565	0.326705	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr3_-_101039403_101039441	0.326691	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg19_v1_chr17_+_7323642_7323702	0.326655	SOX2.p2	AK097400|SPEM1|374768|spermatid maturation 1	BC033882|SPEM1|374768|spermatid maturation 1	NM_199339|SPEM1|374768|spermatid maturation 1
hg19_v1_chr11_+_61008643_61008668	0.326517	SOX2.p2	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)
hg19_v1_chr18_-_48723689_48723736	0.326367	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr4_+_81118639_81118670	0.326345	SOX2.p2	NM_001099403|PRDM8|56978|PR domain containing 8	BC071584|PRDM8|56978|PR domain containing 8	AK292137|PRDM8|56978|PR domain containing 8	BC027929|PRDM8|56978|PR domain containing 8
hg19_v1_chr2_-_171923482_171923482	0.325999	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg19_v1_chrY_-_1281526_1281642	0.325699	SOX2.p2	AB052639|CRLF2|64109|cytokine receptor-like factor 2	AF338733|CRLF2|64109|cytokine receptor-like factor 2	AY775789|CRLF2|64109|cytokine receptor-like factor 2	NM_001012288|CRLF2|64109|cytokine receptor-like factor 2	AF142570|CRLF2|64109|cytokine receptor-like factor 2	NM_022148|CRLF2|64109|cytokine receptor-like factor 2	AK026800|CRLF2|64109|cytokine receptor-like factor 2	AK223303|CRLF2|64109|cytokine receptor-like factor 2
hg19_v1_chr8_-_37797646_37797646	0.324485	SOX2.p2	BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1	NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1
hg19_v1_chr19_-_52674895_52674895	0.32447	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg19_v1_chr6_+_43738177_43738318	0.324055	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr1_+_68150858_68150962	0.323095	SOX2.p2	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg19_v1_chr14_+_55168831_55168947	0.323058	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg19_v1_chr3_+_102153858_102153876	0.322911	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg19_v1_chr17_-_39728304_39728309	0.322853	SOX2.p2	BC121170|KRT9|3857|keratin 9	NM_000226|KRT9|3857|keratin 9	S69510|KRT9|3857|keratin 9	Z29074|KRT9|3857|keratin 9
hg19_v1_chr3_-_111851967_111852151	0.322845	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg19_v1_chr6_+_32940860_32940860	0.321392	SOX2.p2	BX647233|BRD2|6046|bromodomain containing 2	NM_001199456|BRD2|6046|bromodomain containing 2
hg19_v1_chr8_+_103563847_103563876	0.320916	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg19_v1_chr19_-_59030920_59030986	0.320813	SOX2.p2	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45	NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45
hg19_v1_chr11_-_57417247_57417416	0.320165	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg19_v1_chr8_+_32579350_32579435	0.320109	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg19_v1_chr7_+_154002194_154002577	0.319381	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr7_-_92463211_92463230	0.319288	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg19_v1_chr6_+_45296053_45296059	0.318347	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg19_v1_chr1_-_154164551_154164608	0.318132	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg19_v1_chr7_-_99698916_99698992	0.317996	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr17_+_38474513_38474536	0.317419	SOX2.p2	AK292205|RARA|5914|retinoic acid receptor, alpha	FJ487576|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr17_-_26697224_26697290	0.317147	SOX2.p2	DQ893394|VTN|7448|vitronectin	DQ896716|VTN|7448|vitronectin	X03168|VTN|7448|vitronectin
hg19_v1_chr11_+_6866882_6866913	0.316785	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg19_v1_chr12_-_102874158_102874273	0.316141	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr12_-_10588543_10588615	0.315903	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg19_v1_chr15_+_49715374_49715458	0.315797	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7
hg19_v1_chr19_+_11071719_11071781	0.315784	SOX2.p2	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr3_+_39371196_39371294	0.315655	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg19_v1_chr1_-_159895279_159895296	0.31511	SOX2.p2	BC002616|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	GU727636|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg19_v1_chr3_-_52001388_52001481	0.315036	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg19_v1_chr8_+_11660179_11660189	0.314923	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr12_-_80307690_80307690	0.314826	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chr1_+_22778347_22778505	0.31468	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr12_-_16759939_16760083	0.314677	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr11_+_65339819_65340044	0.314137	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B
hg19_v1_chr5_-_87969135_87969156	0.313983	SOX2.p2	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461	AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461	AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461	BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461
hg19_v1_chr4_+_699529_699731	0.313119	SOX2.p2	AK225892|PCGF3|10336|polycomb group ring finger 3	NM_006315|PCGF3|10336|polycomb group ring finger 3	AK057124|PCGF3|10336|polycomb group ring finger 3	AK300290|PCGF3|10336|polycomb group ring finger 3	AK125801|PCGF3|10336|polycomb group ring finger 3
hg19_v1_chr11_-_64727608_64727608	0.312749	SOX2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg19_v1_chr10_+_70980058_70980104	0.312447	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg19_v1_chr11_-_2925174_2925174	0.311847	SOX2.p2	NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense
hg19_v1_chr7_+_107301079_107301079	0.311789	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg19_v1_chr7_-_148725731_148725755	0.311338	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr11_-_10715297_10715321	0.311321	SOX2.p2	AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr6_+_64286348_64286872	0.311047	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr12_+_60083125_60083154	0.310932	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg19_v1_chr12_-_57873628_57873632	0.310818	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr5_+_132428394_132428412	0.310372	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr22_+_44568835_44568878	0.310234	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg19_v1_chr19_+_40194945_40195141	0.310161	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg19_v1_chr12_-_109027615_109027651	0.3098	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg19_v1_chrX_+_18709044_18709045	0.309791	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr4_+_41983712_41983839	0.309753	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg19_v1_chr11_+_124120422_124120422	0.308598	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg19_v1_chr11_+_118215058_118215111	0.307557	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg19_v1_chr13_-_74708361_74708431	0.307271	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr11_+_57365577_57365767	0.307021	SOX2.p2	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr19_-_59031167_59031210	0.30697	SOX2.p2	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45
hg19_v1_chr1_-_152297678_152297678	0.306162	SOX2.p2	L01090|FLG|2312|filaggrin	NM_002016|FLG|2312|filaggrin
hg19_v1_chr17_-_34344933_34345004	0.305907	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg19_v1_chr22_-_21984274_21984356	0.304608	SOX2.p2	BC064568|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg19_v1_chr19_-_56249739_56249767	0.304261	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg19_v1_chr20_-_30795346_30795605	0.303628	SOX2.p2	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg19_v1_chr8_+_63161499_63161630	0.303237	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg19_v1_chrX_+_110187468_110187626	0.303178	SOX2.p2	AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr7_+_39663199_39663224	0.303171	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr5_-_127873477_127873557	0.303128	SOX2.p2	AK300440|FBN2|2201|fibrillin 2
hg19_v1_chr13_-_46756291_46756294	0.303119	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v1_chr7_-_99277518_99277624	0.30287	SOX2.p2	DQ890743|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ893913|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ896802|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	EU176488|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	L26985|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	X90579|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	J04813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC033862|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC025176|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK296205|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK313813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK223008|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK299002|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK309166|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC022298|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC026255|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX648856|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX537676|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_000777|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_001190484|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v1_chr14_-_91884138_91884159	0.302749	SOX2.p2	AF070587|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr6_-_71012750_71012850	0.302615	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg19_v1_chr5_-_16738346_16738495	0.302352	SOX2.p2	AK295736|MYO10|4651|myosin X
hg19_v1_chr8_-_20040612_20040716	0.302163	SOX2.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg19_v1_chr16_-_47005339_47005358	0.302045	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v1_chr10_+_11047274_11047297	0.302045	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr4_-_7941092_7941684	0.30194	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg19_v1_chr6_+_134758840_134758857	0.30186	SOX2.p2	AK055166|LOC154092|154092|uncharacterized LOC154092
hg19_v1_chr8_-_105601234_105601261	0.301752	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chrX_+_106171328_106171458	0.301572	SOX2.p2	AY358474|CLDN2|9075|claudin 2	BC014424|CLDN2|9075|claudin 2	DQ892216|CLDN2|9075|claudin 2	DQ895412|CLDN2|9075|claudin 2	AF250558|CLDN2|9075|claudin 2
hg19_v1_chr6_+_56954978_56954984	0.301514	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg19_v1_chr10_-_5045967_5046093	0.300289	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr8_+_38585703_38585703	0.299713	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg19_v1_chr16_-_4987056_4987152	0.29957	SOX2.p2	AF013717|PPL|5493|periplakin	BC114620|PPL|5493|periplakin	AF001691|PPL|5493|periplakin	NM_002705|PPL|5493|periplakin
hg19_v1_chr9_+_131644427_131644478	0.29949	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr12_+_32260084_32260263	0.298783	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg19_v1_chr12_-_45307710_45307710	0.298774	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr5_+_34656482_34656543	0.29871	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr2_-_110873353_110873457	0.298177	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr22_-_21984366_21984434	0.298073	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg19_v1_chr4_+_175839508_175839558	0.297801	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg19_v1_chr15_+_33603162_33603176	0.297484	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr1_+_100316530_100316598	0.297359	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr11_-_107729523_107729653	0.296875	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr17_-_76921453_76921501	0.296723	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr12_+_111471827_111471917	0.296279	SOX2.p2	BC151245|CUX2|23316|cut-like homeobox 2	NM_015267|CUX2|23316|cut-like homeobox 2	AB006631|CUX2|23316|cut-like homeobox 2	AF271236|CUX2|23316|cut-like homeobox 2
hg19_v1_chr4_+_76649806_76649825	0.295099	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr8_-_6420454_6420929	0.295037	SOX2.p2	HQ258258|ANGPT2|285|angiopoietin 2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg19_v1_chr1_-_44482996_44483011	0.29499	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr1_+_110882057_110882057	0.294826	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr5_+_172068188_172068319	0.294672	SOX2.p2	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg19_v1_chr9_+_18474138_18474228	0.294562	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr12_-_16760935_16761147	0.294472	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr12_+_7282963_7283286	0.294458	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr4_-_52883785_52883785	0.2943	SOX2.p2	CR749811|LRRC66|339977|leucine rich repeat containing 66	NM_001024611|LRRC66|339977|leucine rich repeat containing 66
hg19_v1_chr2_-_38829973_38830012	0.293862	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr2_+_68592432_68592483	0.293266	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg19_v1_chr17_-_39092714_39093086	0.292975	SOX2.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr7_-_19812403_19812403	0.292694	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg19_v1_chr1_+_154947116_154947142	0.292385	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg19_v1_chr17_-_41738901_41738930	0.29217	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr2_+_204571197_204571363	0.292163	SOX2.p2	NM_001243077|CD28|940|CD28 molecule	NM_001243078|CD28|940|CD28 molecule	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg19_v1_chr6_+_34204647_34204654	0.291487	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr7_-_121944485_121944693	0.291363	SOX2.p2	AY726588|FEZF1|389549|FEZ family zinc finger 1	BC127714|FEZF1|389549|FEZ family zinc finger 1	BC127715|FEZF1|389549|FEZ family zinc finger 1	NM_001024613|FEZF1|389549|FEZ family zinc finger 1	NM_001160264|FEZF1|389549|FEZ family zinc finger 1	BC136684|FEZF1|389549|FEZ family zinc finger 1	BC144367|FEZF1|389549|FEZ family zinc finger 1	AK300742|FEZF1|389549|FEZ family zinc finger 1
hg19_v1_chr19_+_10764987_10765105	0.290909	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr17_-_39538635_39538654	0.2907	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg19_v1_chr2_+_102615456_102615458	0.29065	SOX2.p2	BC027733|IL1R2|7850|interleukin 1 receptor, type II	BC012346|IL1R2|7850|interleukin 1 receptor, type II	NM_173343|IL1R2|7850|interleukin 1 receptor, type II
hg19_v1_chr11_+_5009420_5009439	0.290235	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg19_v1_chr4_-_152096655_152096703	0.290063	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr4_+_39408472_39408496	0.289716	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg19_v1_chr20_+_31367637_31367657	0.288806	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr19_+_55014012_55014134	0.288567	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	HQ448404|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg19_v1_chr1_-_58716173_58716192	0.288262	SOX2.p2	CR933698|DAB1|1600|disabled homolog 1 (Drosophila)	AB210012|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr15_-_74659926_74660080	0.287797	SOX2.p2	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v1_chr7_-_23053732_23053769	0.287774	SOX2.p2	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg19_v1_chr8_+_126442557_126442601	0.287264	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg19_v1_chr3_-_112359962_112359992	0.28697	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr5_+_150157507_150157507	0.286012	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg19_v1_chr2_+_85360373_85360946	0.285968	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v1_chr12_-_105478218_105478412	0.285709	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg19_v1_chr11_+_13690151_13690229	0.285497	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr12_-_11062160_11062160	0.285474	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg19_v1_chr15_+_67430358_67430358	0.285078	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg19_v1_chr15_+_38544119_38544671	0.284366	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg19_v1_chr2_+_201170795_201171404	0.284148	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr17_+_73720775_73720783	0.284105	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr17_-_2966900_2966954	0.284064	SOX2.p2	BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5	NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5
hg19_v1_chr1_-_68697997_68698317	0.283342	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr6_-_133035180_133035196	0.283293	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg19_v1_chr11_-_118095708_118095808	0.283251	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr1_+_66458389_66458417	0.282762	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr16_-_58663727_58663731	0.282742	SOX2.p2	BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr1_+_153606550_153606574	0.282428	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr6_-_138893666_138893750	0.282388	SOX2.p2	NM_020464|NHSL1|57224|NHS-like 1
hg19_v1_chr8_-_93107643_93107711	0.282198	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr10_+_90751044_90751198	0.281773	SOX2.p2	AK311424|FAS|355|Fas (TNF receptor superfamily, member 6)	AK311164|FAS|355|Fas (TNF receptor superfamily, member 6)	AK311499|FAS|355|Fas (TNF receptor superfamily, member 6)
hg19_v1_chr8_-_93111915_93111915	0.281005	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr19_+_35606731_35606798	0.280809	SOX2.p2	NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3	BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3	U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3
hg19_v1_chr13_-_39612183_39612220	0.280198	SOX2.p2	AK074360|PROSER1|80209|proline and serine rich 1	AB107354|PROSER1|80209|proline and serine rich 1
hg19_v1_chr1_-_224622000_224622000	0.280165	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg19_v1_chr20_+_30795574_30795696	0.280033	SOX2.p2	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr10_-_108924287_108924465	0.279642	SOX2.p2	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg19_v1_chr20_+_60877939_60878022	0.278694	SOX2.p2	AK307459|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr2_+_158958381_158958381	0.278184	SOX2.p2	AK122743|UPP2|151531|uridine phosphorylase 2	NM_173355|UPP2|151531|uridine phosphorylase 2
hg19_v1_chr13_+_98605928_98605947	0.278064	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg19_v1_chr3_+_82035288_82035316	0.27798	SOX2.p2	
hg19_v1_chr9_+_131644368_131644398	0.277575	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr4_+_1902352_1902381	0.277456	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg19_v1_chr7_-_14029641_14029641	0.27703	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr9_-_95166827_95166980	0.276935	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr3_+_46283871_46283962	0.276355	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg19_v1_chr17_+_52978022_52978290	0.276215	SOX2.p2	NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1	AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1	AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1	AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1	AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1	AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1	AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1	BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1
hg19_v1_chr6_-_99797530_99797530	0.276055	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg19_v1_chr21_+_37536838_37536838	0.275706	SOX2.p2	AJ237839|DOPEY2|9980|dopey family member 2	NM_005128|DOPEY2|9980|dopey family member 2
hg19_v1_chr21_+_35014624_35015086	0.275455	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr6_+_160183510_160183544	0.275412	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg19_v1_chr10_-_75193297_75193369	0.275066	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg19_v1_chr5_+_143191725_143191791	0.274623	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg19_v1_chrX_-_15872905_15872913	0.274606	SOX2.p2	
hg19_v1_chr9_+_133710641_133710694	0.274089	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr7_+_39663140_39663193	0.273947	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr17_-_17485744_17485751	0.273814	SOX2.p2	AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr20_-_10654139_10654269	0.273812	SOX2.p2	U77720|JAG1|182|jagged 1	HQ258535|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg19_v1_chr11_+_5710926_5711111	0.273622	SOX2.p2	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr2_+_71205574_71205574	0.272981	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53
hg19_v1_chr11_+_118889427_118889482	0.272686	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr16_-_21663908_21663933	0.272566	SOX2.p2	DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6	DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6	EU176227|IGSF6|10261|immunoglobulin superfamily, member 6	EU176324|IGSF6|10261|immunoglobulin superfamily, member 6	AK313860|IGSF6|10261|immunoglobulin superfamily, member 6	AK223286|IGSF6|10261|immunoglobulin superfamily, member 6	AK290910|IGSF6|10261|immunoglobulin superfamily, member 6	AK293703|IGSF6|10261|immunoglobulin superfamily, member 6	BC017844|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr2_+_113279582_113279727	0.272541	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg19_v1_chr8_-_81787015_81787015	0.27254	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr19_-_39303520_39303586	0.272462	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr2_-_106810735_106810755	0.272242	SOX2.p2	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr16_+_21611132_21611177	0.272102	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg19_v1_chr3_+_57994087_57994207	0.270924	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg19_v1_chr2_+_90077732_90077776	0.270868	SOX2.p2	
hg19_v1_chr7_-_88425030_88425030	0.270453	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg19_v1_chr1_-_151118932_151119163	0.270228	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v1_chr12_-_102874373_102874391	0.269994	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr20_+_60878024_60878046	0.269756	SOX2.p2	NM_007002|ADRM1|11047|adhesion regulating molecule 1	NM_175573|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr9_+_27524311_27524334	0.269416	SOX2.p2	AF146759|IFNK|56832|interferon, kappa	AF315688|IFNK|56832|interferon, kappa	NM_020124|IFNK|56832|interferon, kappa	AY358855|IFNK|56832|interferon, kappa
hg19_v1_chr1_-_228604582_228604588	0.2693	SOX2.p2	NM_001024940|TRIM17|51127|tripartite motif containing 17	NM_001134855|TRIM17|51127|tripartite motif containing 17	NM_016102|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr12_-_109027565_109027584	0.269181	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg19_v1_chr7_+_72300044_72300155	0.268978	SOX2.p2	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg19_v1_chr16_+_70333096_70333200	0.268862	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr19_+_3572903_3572949	0.268853	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr6_-_75965845_75965927	0.268283	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr19_-_4182495_4182595	0.268069	SOX2.p2	DQ896358|SIRT6|51548|sirtuin 6	EU176413|SIRT6|51548|sirtuin 6	CR457200|SIRT6|51548|sirtuin 6	BC005026|SIRT6|51548|sirtuin 6	BC004218|SIRT6|51548|sirtuin 6	AK299420|SIRT6|51548|sirtuin 6	BC028220|SIRT6|51548|sirtuin 6	AK293348|SIRT6|51548|sirtuin 6	AK315048|SIRT6|51548|sirtuin 6	AK301247|SIRT6|51548|sirtuin 6	AK074810|SIRT6|51548|sirtuin 6	AK225567|SIRT6|51548|sirtuin 6	AF233396|SIRT6|51548|sirtuin 6	NM_001193285|SIRT6|51548|sirtuin 6	NM_016539|SIRT6|51548|sirtuin 6
hg19_v1_chr1_+_213123853_213123982	0.268036	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr15_-_43594452_43594452	0.267842	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg19_v1_chr1_-_70671160_70671261	0.267294	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg19_v1_chr15_+_91643181_91643238	0.267146	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg19_v1_chr2_-_188419185_188419218	0.266791	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v1_chr4_+_76649826_76650003	0.266683	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr10_-_5446781_5446796	0.266671	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr12_+_22778085_22778210	0.266629	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr19_-_57968106_57968106	0.26624	SOX2.p2	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1
hg19_v1_chr1_+_198608244_198608417	0.266021	SOX2.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr11_-_3013550_3013560	0.264677	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr2_+_241375235_241375295	0.264221	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg19_v1_chr3_-_128294928_128294928	0.264122	SOX2.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg19_v1_chr17_-_29641094_29641129	0.263594	SOX2.p2	AK297087|EVI2B|2124|ecotropic viral integration site 2B	NM_006495|EVI2B|2124|ecotropic viral integration site 2B
hg19_v1_chr2_-_136873740_136873857	0.263002	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg19_v1_chr20_+_39765849_39765876	0.262869	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg19_v1_chr7_+_150688143_150688191	0.262794	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr1_-_159895258_159895272	0.262598	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2
hg19_v1_chr12_-_92539614_92539672	0.262562	SOX2.p2	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg19_v1_chr12_-_10251520_10251663	0.262343	SOX2.p2	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg19_v1_chr3_-_57583080_57583087	0.262337	SOX2.p2	BC008753|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr9_+_110047049_110047134	0.262232	SOX2.p2	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg19_v1_chr12_-_54653317_54653332	0.261722	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr15_-_79103571_79103930	0.261553	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg19_v1_chr8_-_145027975_145028087	0.261485	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg19_v1_chr1_+_367639_367658	0.26093	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chr1_-_168105620_168105623	0.260091	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr10_+_5005453_5005576	0.25991	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg19_v1_chr5_-_39364562_39364654	0.259873	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg19_v1_chr8_+_38244647_38244648	0.259738	SOX2.p2	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2	NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2
hg19_v1_chr2_+_14772839_14772864	0.259477	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr17_-_17485691_17485724	0.259211	SOX2.p2	AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr1_-_157789832_157789939	0.259014	SOX2.p2	AF329488|FCRL1|115350|Fc receptor-like 1	BC021274|FCRL1|115350|Fc receptor-like 1	AK315748|FCRL1|115350|Fc receptor-like 1	AK096690|FCRL1|115350|Fc receptor-like 1	BC033690|FCRL1|115350|Fc receptor-like 1	AF459634|FCRL1|115350|Fc receptor-like 1	AY043464|FCRL1|115350|Fc receptor-like 1	NM_001159397|FCRL1|115350|Fc receptor-like 1	NM_001159398|FCRL1|115350|Fc receptor-like 1	NM_052938|FCRL1|115350|Fc receptor-like 1
hg19_v1_chr1_-_79472360_79472494	0.258354	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v1_chr2_+_166326156_166326212	0.257789	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr5_-_9630462_9630462	0.257679	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg19_v1_chr12_-_16759733_16759733	0.256751	SOX2.p2	BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr4_+_106631966_106631969	0.256457	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr19_+_3572958_3572999	0.256392	SOX2.p2	AK314201|HMG20B|10362|high mobility group 20B	AK090733|HMG20B|10362|high mobility group 20B	AK310601|HMG20B|10362|high mobility group 20B	AF318366|HMG20B|10362|high mobility group 20B
hg19_v1_chr21_+_47269874_47269903	0.256157	SOX2.p2	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg19_v1_chr9_+_103191795_103191795	0.255997	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr5_-_11903964_11904109	0.255775	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr21_-_37948866_37948866	0.255354	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg19_v1_chr6_-_112575880_112575911	0.25522	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chr4_-_186877413_186877531	0.255013	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr20_-_10654429_10654710	0.254934	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg19_v1_chr7_-_148725500_148725610	0.254803	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr5_+_140797210_140797222	0.254784	SOX2.p2	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr8_+_59323822_59323948	0.254487	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	HQ258392|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg19_v1_chr2_-_99347430_99347562	0.253285	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr20_-_23433478_23433481	0.25319	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg19_v1_chr3_-_150996153_150996229	0.253037	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg19_v1_chr10_+_71562275_71562307	0.252372	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg19_v1_chr10_-_98273444_98273682	0.252367	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg19_v1_chr2_+_68694669_68694860	0.2519	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg19_v1_chrX_+_129139163_129139250	0.251671	SOX2.p2	NM_021946|BCORL1|63035|BCL6 corepressor-like 1	AK074089|BCORL1|63035|BCL6 corepressor-like 1
hg19_v1_chr5_-_172755418_172755468	0.251547	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg19_v1_chr10_-_50732142_50732358	0.251507	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg19_v1_chr11_-_111750144_111750180	0.251012	SOX2.p2	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg19_v1_chr11_+_450346_450396	0.250898	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr13_-_103411421_103411421	0.250742	SOX2.p2	NM_001146197|CCDC168|643677|coiled-coil domain containing 168
hg19_v1_chr2_+_128928040_128928054	0.250677	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v1_chr8_-_66753968_66753968	0.250515	SOX2.p2	NM_001242318|PDE7A|5150|phosphodiesterase 7A
hg19_v1_chr17_-_37350051_37350135	0.250455	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr3_+_138066489_138066538	0.25024	SOX2.p2	NM_001252091|MRAS|22808|muscle RAS oncogene homolog	NM_012219|MRAS|22808|muscle RAS oncogene homolog	AK124954|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr19_+_3572950_3572957	0.250212	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr9_-_19033183_19033255	0.250172	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg19_v1_chr3_+_85775631_85775631	0.249657	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg19_v1_chr20_+_60878048_60878073	0.249387	SOX2.p2	BC017245|ADRM1|11047|adhesion regulating molecule 1	BC093021|ADRM1|11047|adhesion regulating molecule 1	BC003059|ADRM1|11047|adhesion regulating molecule 1	AK297567|ADRM1|11047|adhesion regulating molecule 1	D64154|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr19_+_38397880_38397945	0.249292	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr6_+_64356430_64356455	0.248909	SOX2.p2	AF091622|PHF3|23469|PHD finger protein 3	BC113650|PHF3|23469|PHD finger protein 3	BC113652|PHF3|23469|PHD finger protein 3	NM_015153|PHF3|23469|PHD finger protein 3	D87685|PHF3|23469|PHD finger protein 3
hg19_v1_chr1_-_225616556_225616556	0.248364	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr5_+_90676131_90676193	0.247952	SOX2.p2	BC043415|LOC100129716|100129716|uncharacterized LOC100129716
hg19_v1_chr4_-_83350829_83351248	0.24751	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr2_+_211458078_211458092	0.247424	SOX2.p2	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr3_+_171757432_171757437	0.246738	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg19_v1_chrX_+_153030956_153030966	0.245921	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg19_v1_chr11_+_14926542_14926557	0.245273	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg19_v1_chr4_+_150999412_150999638	0.244595	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg19_v1_chr4_-_152147520_152147659	0.244575	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg19_v1_chr4_+_1723212_1723223	0.244398	SOX2.p2	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr16_+_89988416_89988416	0.243981	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3 class III	NM_001197181|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr5_+_125967405_125967426	0.243763	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48	HQ258080|C5orf48|389320|chromosome 5 open reading frame 48
hg19_v1_chr11_-_10715160_10715174	0.243594	SOX2.p2	AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog	AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog
hg19_v1_chr3_-_112359277_112359287	0.243574	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr16_+_77233348_77233375	0.243429	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg19_v1_chr11_+_66790189_66790189	0.243219	SOX2.p2	AK315810|SYT12|91683|synaptotagmin XII	NM_001177880|SYT12|91683|synaptotagmin XII
hg19_v1_chr12_-_109027654_109027671	0.242807	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg19_v1_chr15_+_78730568_78730679	0.24277	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	HQ258663|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr4_-_26491888_26492083	0.242433	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg19_v1_chr5_-_179051586_179051669	0.242402	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr12_+_119419299_119419395	0.242375	SOX2.p2	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4
hg19_v1_chr4_-_122085475_122085494	0.242191	SOX2.p2	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3	AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3	AK290409|TNIP3|79931|TNFAIP3 interacting protein 3	BC128408|TNIP3|79931|TNFAIP3 interacting protein 3	EF585496|TNIP3|79931|TNFAIP3 interacting protein 3	NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr11_-_1771823_1771826	0.242118	SOX2.p2	NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10
hg19_v1_chr5_-_158637060_158637060	0.242052	SOX2.p2	AK308394|RNF145|153830|ring finger protein 145	NM_001199380|RNF145|153830|ring finger protein 145
hg19_v1_chr12_+_26205490_26205496	0.241667	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg19_v1_chr20_-_35201677_35201706	0.241624	SOX2.p2	
hg19_v1_chrX_-_130423387_130423438	0.24147	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr12_+_64803741_64803815	0.241211	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg19_v1_chr2_-_225370687_225370770	0.240657	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg19_v1_chr8_+_42195972_42196142	0.240591	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr2_+_153191591_153191750	0.240399	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg19_v1_chr3_+_97158453_97158489	0.240185	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg19_v1_chr8_-_117023_117023	0.240181	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg19_v1_chr9_-_114521792_114521812	0.239995	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg19_v1_chrX_+_52780279_52780345	0.239937	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg19_v1_chr8_+_73449625_73449662	0.239889	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg19_v1_chr19_+_30863318_30863443	0.239884	SOX2.p2	BC150171|ZNF536|9745|zinc finger protein 536	AB002388|ZNF536|9745|zinc finger protein 536	BC146757|ZNF536|9745|zinc finger protein 536	NM_014717|ZNF536|9745|zinc finger protein 536	BC132720|ZNF536|9745|zinc finger protein 536	BC132722|ZNF536|9745|zinc finger protein 536
hg19_v1_chr12_+_104850986_104851188	0.239864	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v1_chr5_+_86564044_86564089	0.239785	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr5_-_176738831_176738938	0.23977	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr5_+_57787260_57787329	0.239565	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg19_v1_chr16_+_89989686_89989830	0.239491	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr3_-_48229328_48229528	0.239376	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg19_v1_chr3_+_14860468_14860468	0.239306	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg19_v1_chr1_+_42928873_42929024	0.238712	SOX2.p2	AL832217|CCDC30|728621|coiled-coil domain containing 30
hg19_v1_chr19_-_33360641_33360682	0.23852	SOX2.p2	BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9
hg19_v1_chr17_+_39388714_39388751	0.238122	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr4_+_78432905_78432906	0.238023	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg19_v1_chr1_+_186265404_186265410	0.237732	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg19_v1_chr1_-_201390845_201390873	0.237524	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg19_v1_chr20_-_45976626_45976669	0.236608	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr10_+_121578768_121578785	0.236584	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr15_+_77287428_77287553	0.236513	SOX2.p2	AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chrX_-_106960028_106960230	0.236127	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chr16_-_4562979_4563123	0.236053	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr1_+_181003066_181003137	0.235656	SOX2.p2	AK304645|MR1|3140|major histocompatibility complex, class I-related	AK290374|MR1|3140|major histocompatibility complex, class I-related	AK222910|MR1|3140|major histocompatibility complex, class I-related
hg19_v1_chr7_-_102283237_102283315	0.235418	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like
hg19_v1_chr10_+_73723992_73724122	0.23502	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v1_chr10_-_91102430_91102481	0.234647	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr19_+_10764896_10764985	0.234611	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr4_+_1723233_1723303	0.234379	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr9_-_134955056_134955242	0.23428	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr11_+_129940462_129940462	0.233982	SOX2.p2	AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr5_-_150537335_150537442	0.233815	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg19_v1_chr16_+_67907018_67907035	0.233797	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr11_+_120973374_120973374	0.233405	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg19_v1_chr4_-_189026401_189026407	0.233259	SOX2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg19_v1_chr9_+_131644780_131644780	0.233132	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr11_-_2162340_2162583	0.233017	SOX2.p2	NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg19_v1_chr11_-_35441501_35441609	0.233012	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr7_-_150780571_150780638	0.232949	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg19_v1_chr10_+_98740987_98741147	0.232875	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg19_v1_chr8_-_23261632_23261666	0.232739	SOX2.p2	AK222477|LOXL2|4017|lysyl oxidase-like 2	AK312266|LOXL2|4017|lysyl oxidase-like 2	BC020481|LOXL2|4017|lysyl oxidase-like 2	AK293292|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr17_-_56492938_56493134	0.231817	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg19_v1_chr17_-_16472463_16472529	0.231744	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg19_v1_chr7_+_129008044_129008133	0.231667	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr7_+_87563432_87563734	0.231647	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg19_v1_chr6_-_123957941_123958237	0.231144	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr5_+_140797243_140797259	0.230844	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr2_+_207804277_207804323	0.230364	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg19_v1_chr22_+_25615611_25615611	0.230137	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg19_v1_chr15_+_25200069_25200191	0.229417	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg19_v1_chr18_+_3453771_3453771	0.229299	SOX2.p2	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr11_-_3013522_3013529	0.228954	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr14_-_73925214_73925251	0.22878	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr17_-_29641087_29641092	0.228763	SOX2.p2	BC005926|EVI2B|2124|ecotropic viral integration site 2B
hg19_v1_chrX_-_64196268_64196430	0.228677	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg19_v1_chr17_-_27402626_27402626	0.228168	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg19_v1_chr14_-_59951125_59951130	0.228052	SOX2.p2	
hg19_v1_chr12_+_79439432_79439471	0.227855	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg19_v1_chr7_+_20686965_20687217	0.227661	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v1_chr6_-_29644930_29644930	0.227366	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg19_v1_chr11_-_5291372_5291372	0.227171	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg19_v1_chr8_-_23261591_23261612	0.226818	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr2_-_162931051_162931062	0.226476	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr22_+_23522551_23522690	0.225958	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg19_v1_chr5_-_138211054_138211064	0.225585	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr16_+_8806825_8806846	0.225392	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr1_-_43424324_43424520	0.225277	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr12_-_52715140_52715181	0.224981	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg19_v1_chr8_+_66933790_66933848	0.224535	SOX2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v1_chr2_+_196521470_196521681	0.224516	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr14_-_88737160_88737273	0.223583	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr2_-_106810781_106810830	0.223469	SOX2.p2	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr20_+_17207669_17207674	0.223404	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr19_+_51760963_51760963	0.223324	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg19_v1_chr13_+_46276445_46276445	0.223291	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg19_v1_chr9_+_137218313_137218318	0.223061	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg19_v1_chr1_+_207002221_207002221	0.222411	SOX2.p2	AF453946|IL19|29949|interleukin 19	NM_013371|IL19|29949|interleukin 19
hg19_v1_chr13_-_48987247_48987263	0.22241	SOX2.p2	BX537445|LPAR6|10161|lysophosphatidic acid receptor 6	AK123059|LPAR6|10161|lysophosphatidic acid receptor 6	BX537392|LPAR6|10161|lysophosphatidic acid receptor 6	BX537438|LPAR6|10161|lysophosphatidic acid receptor 6	BX647109|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr19_+_19303732_19303772	0.222351	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg19_v1_chr1_-_43637969_43638240	0.222189	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg19_v1_chr17_-_73389708_73389847	0.222158	SOX2.p2	AF498925|GRB2|2885|growth factor receptor-bound protein 2	CR450363|GRB2|2885|growth factor receptor-bound protein 2	CR541942|GRB2|2885|growth factor receptor-bound protein 2	DQ891830|GRB2|2885|growth factor receptor-bound protein 2	DQ894923|GRB2|2885|growth factor receptor-bound protein 2	L29511|GRB2|2885|growth factor receptor-bound protein 2
hg19_v1_chr12_-_102874321_102874323	0.222045	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr12_-_57873364_57873425	0.22174	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr12_+_106976684_106976699	0.221686	SOX2.p2	AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg19_v1_chr10_+_35894337_35894337	0.221673	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg19_v1_chr1_+_84864214_84864259	0.221631	SOX2.p2	AF274571|DNASE2B|58511|deoxyribonuclease II beta	NM_021233|DNASE2B|58511|deoxyribonuclease II beta	BC126136|DNASE2B|58511|deoxyribonuclease II beta	BC126138|DNASE2B|58511|deoxyribonuclease II beta	HQ258219|DNASE2B|58511|deoxyribonuclease II beta
hg19_v1_chr11_+_8060179_8060179	0.221046	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg19_v1_chr3_+_19988530_19988849	0.220095	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr12_-_8765438_8765441	0.219991	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase
hg19_v1_chr6_-_11382501_11382580	0.219745	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr11_+_65407591_65407591	0.219179	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg19_v1_chr12_-_58146110_58146116	0.218864	SOX2.p2	BC015669|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr10_+_35426709_35426763	0.218802	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr6_+_167525294_167525294	0.21863	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chr16_-_49315682_49315786	0.218331	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg19_v1_chr2_+_10091791_10091910	0.218115	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg19_v1_chr6_-_90062439_90062441	0.218107	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chrX_+_134124967_134124967	0.217617	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chr8_-_33457491_33457500	0.217538	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr5_+_150400132_150400214	0.217388	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg19_v1_chr11_-_3013479_3013521	0.217312	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr2_-_203776200_203776429	0.217189	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg19_v1_chr12_-_103889745_103889748	0.216988	SOX2.p2	AK058052|C12orf42|374470|chromosome 12 open reading frame 42	BC039352|C12orf42|374470|chromosome 12 open reading frame 42	BC117392|C12orf42|374470|chromosome 12 open reading frame 42	BC117394|C12orf42|374470|chromosome 12 open reading frame 42	NM_198521|C12orf42|374470|chromosome 12 open reading frame 42	BC044617|C12orf42|374470|chromosome 12 open reading frame 42	NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42
hg19_v1_chr5_-_44388666_44388865	0.216592	SOX2.p2	AF508782|FGF10|2255|fibroblast growth factor 10	AB002097|FGF10|2255|fibroblast growth factor 10	AF411527|FGF10|2255|fibroblast growth factor 10	BC069561|FGF10|2255|fibroblast growth factor 10	CR541665|FGF10|2255|fibroblast growth factor 10	CR541688|FGF10|2255|fibroblast growth factor 10	GQ351295|FGF10|2255|fibroblast growth factor 10	HQ258011|FGF10|2255|fibroblast growth factor 10	NM_004465|FGF10|2255|fibroblast growth factor 10	U67918|FGF10|2255|fibroblast growth factor 10	BC105023|FGF10|2255|fibroblast growth factor 10	BC105021|FGF10|2255|fibroblast growth factor 10
hg19_v1_chr9_+_109625347_109625381	0.216559	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg19_v1_chrX_+_47077426_47077793	0.216423	SOX2.p2	NM_033018|CDK16|5127|cyclin-dependent kinase 16	BC001048|CDK16|5127|cyclin-dependent kinase 16	BC015607|CDK16|5127|cyclin-dependent kinase 16
hg19_v1_chr1_+_32479401_32479596	0.216203	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg19_v1_chr3_-_165555167_165555220	0.215732	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr10_-_33224485_33224485	0.215695	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr8_-_139926235_139926253	0.21552	SOX2.p2	AF406780|COL22A1|169044|collagen, type XXII, alpha 1	NM_152888|COL22A1|169044|collagen, type XXII, alpha 1
hg19_v1_chr19_-_36247917_36247945	0.215462	SOX2.p2	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg19_v1_chr19_+_12949258_12949385	0.215205	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg19_v1_chr5_+_161275897_161275897	0.215074	SOX2.p2	NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr15_+_75074417_75074433	0.215055	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase
hg19_v1_chr2_-_130929945_130930057	0.215004	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg19_v1_chr6_-_10415217_10415334	0.214869	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr17_-_30669133_30669281	0.214667	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr8_+_87878672_87878675	0.214645	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg19_v1_chr5_-_98262217_98262239	0.21459	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg19_v1_chr22_-_41682187_41682228	0.21418	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr9_-_85882093_85882201	0.214178	SOX2.p2	GQ129452|FRMD3|257019|FERM domain containing 3	BC023560|FRMD3|257019|FERM domain containing 3	NM_001244962|FRMD3|257019|FERM domain containing 3
hg19_v1_chr14_+_35761604_35761682	0.214104	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v1_chr6_-_32339648_32339679	0.213846	SOX2.p2	AK302176|C6orf10|10665|chromosome 6 open reading frame 10	BC034774|C6orf10|10665|chromosome 6 open reading frame 10	NM_006781|C6orf10|10665|chromosome 6 open reading frame 10	AK310230|C6orf10|10665|chromosome 6 open reading frame 10	AK225742|C6orf10|10665|chromosome 6 open reading frame 10
hg19_v1_chr4_-_21699317_21699317	0.213726	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr5_-_137514299_137514368	0.213506	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg19_v1_chr22_+_23522743_23522858	0.212927	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg19_v1_chr6_+_4776641_4776679	0.212363	SOX2.p2	AK291601|CDYL|9425|chromodomain protein, Y-like	BC108725|CDYL|9425|chromodomain protein, Y-like	NM_004824|CDYL|9425|chromodomain protein, Y-like
hg19_v1_chr1_+_192544856_192544961	0.212192	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1
hg19_v1_chr17_-_67057046_67057135	0.212079	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr20_-_31239558_31239782	0.211783	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg19_v1_chr8_-_101158027_101158098	0.211692	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg19_v1_chr1_-_17766241_17766301	0.210861	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr5_+_161494647_161495043	0.210231	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v1_chr18_+_55888799_55888808	0.210217	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chrX_-_24665225_24665425	0.210068	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr3_-_124930192_124930242	0.209738	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr16_+_67906924_67906967	0.209565	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr4_-_153303663_153303666	0.209468	SOX2.p2	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7	AY008274|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr1_-_150947202_150947219	0.209293	SOX2.p2	AF177338|CERS2|29956|ceramide synthase 2
hg19_v1_chr21_-_31538970_31539043	0.209237	SOX2.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg19_v1_chr2_-_107503517_107503576	0.209205	SOX2.p2	AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v1_chr10_-_30918625_30918646	0.208742	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg19_v1_chr15_-_101792125_101792145	0.208646	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chr17_+_3572089_3572115	0.208428	SOX2.p2	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg19_v1_chr2_+_238536183_238536535	0.208369	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg19_v1_chr9_-_8733893_8733945	0.207654	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr7_+_128349111_128349143	0.207597	SOX2.p2	AK093161|FAM71F1|84691|family with sequence similarity 71, member F1	AK302221|FAM71F1|84691|family with sequence similarity 71, member F1	BC040906|FAM71F1|84691|family with sequence similarity 71, member F1	AK310426|FAM71F1|84691|family with sequence similarity 71, member F1
hg19_v1_chr12_-_121734543_121734708	0.207472	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr1_+_202183282_202183282	0.207378	SOX2.p2	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v1_chr1_+_147374945_147374945	0.205901	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg19_v1_chr8_+_90770201_90770368	0.205802	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg19_v1_chr11_-_5706186_5706341	0.20545	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr10_-_90750955_90751146	0.20524	SOX2.p2	AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chr9_-_35650852_35650946	0.205055	SOX2.p2	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg19_v1_chr6_+_129204285_129204341	0.204926	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg19_v1_chr17_-_56032494_56032858	0.204898	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg19_v1_chr14_+_39703119_39703318	0.204558	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	HQ258350|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg19_v1_chr8_-_38326115_38326188	0.204501	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr7_+_143174965_143174965	0.20431	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg19_v1_chr4_+_88571453_88571458	0.204061	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr8_-_52721903_52722004	0.203688	SOX2.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg19_v1_chr14_+_24641084_24641101	0.203559	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg19_v1_chr6_+_44187241_44187471	0.203372	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr12_-_99548867_99548867	0.202924	SOX2.p2	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr2_+_207406815_207406857	0.202469	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr1_-_179112178_179112223	0.202451	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg19_v1_chr11_+_118889140_118889240	0.202372	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr10_+_49892860_49892920	0.202218	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg19_v1_chr19_+_10713055_10713212	0.201719	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg19_v1_chr7_+_23145916_23145916	0.201719	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chrX_+_103357106_103357262	0.2017	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg19_v1_chr11_+_67195886_67196031	0.201657	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg19_v1_chr4_+_88742549_88742562	0.201639	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chr6_+_84562984_84563134	0.200369	SOX2.p2	NM_001009994|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC130460|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC132968|RIPPLY2|134701|ripply2 homolog (zebrafish)	HQ258714|RIPPLY2|134701|ripply2 homolog (zebrafish)
hg19_v1_chr9_+_35041101_35041101	0.20027	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr1_-_153514096_153514240	0.19989	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg19_v1_chr9_+_112403067_112403071	0.199771	SOX2.p2	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg19_v1_chr11_+_118175294_118175667	0.199682	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg19_v1_chr17_-_79849457_79849461	0.199082	SOX2.p2	BC052302|THOC4|10189|THO complex 4	NM_005782|THOC4|10189|THO complex 4
hg19_v1_chr13_-_48987652_48987652	0.19858	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr4_-_184580104_184580380	0.198311	SOX2.p2	BC107432|RWDD4|201965|RWD domain containing 4	AK021702|RWDD4|201965|RWD domain containing 4	AK293274|RWDD4|201965|RWD domain containing 4	AK315515|RWDD4|201965|RWD domain containing 4	BC017472|RWDD4|201965|RWD domain containing 4	BC067752|RWDD4|201965|RWD domain containing 4	NM_152682|RWDD4|201965|RWD domain containing 4
hg19_v1_chr2_+_196521851_196521965	0.198235	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr8_-_124749573_124749665	0.197756	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr14_+_72399149_72399158	0.197287	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6	NM_001204424|RGS6|9628|regulator of G-protein signaling 6
hg19_v1_chr19_+_38810461_38810515	0.197112	SOX2.p2	AF117708|KCNK6|9424|potassium channel, subfamily K, member 6	NM_004823|KCNK6|9424|potassium channel, subfamily K, member 6	AK222545|KCNK6|9424|potassium channel, subfamily K, member 6	AK315653|KCNK6|9424|potassium channel, subfamily K, member 6	AF281302|KCNK6|9424|potassium channel, subfamily K, member 6
hg19_v1_chr20_-_1472004_1472067	0.196871	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr4_+_100432160_100432199	0.196454	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg19_v1_chr10_-_33623978_33624019	0.19636	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg19_v1_chr11_-_67442086_67442176	0.196049	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg19_v1_chr17_-_79849362_79849455	0.195989	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg19_v1_chr1_+_90098624_90098642	0.195723	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr5_+_148731226_148731336	0.195584	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg19_v1_chr22_+_20377668_20377668	0.195236	SOX2.p2	NM_001242313|TMEM191B|728229|transmembrane protein 191B
hg19_v1_chr19_+_58545399_58545473	0.195115	SOX2.p2	BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1	NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1	BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1
hg19_v1_chr9_+_35042222_35042262	0.195067	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr19_-_14629227_14629233	0.194705	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr7_-_107770785_107770800	0.194673	SOX2.p2	BC142619|LAMB4|22798|laminin, beta 4	BC140804|LAMB4|22798|laminin, beta 4	BC144591|LAMB4|22798|laminin, beta 4	AF028816|LAMB4|22798|laminin, beta 4	AK300385|LAMB4|22798|laminin, beta 4	NM_007356|LAMB4|22798|laminin, beta 4
hg19_v1_chr11_-_102401430_102401489	0.194627	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v1_chr6_-_130536417_130536493	0.194583	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chr1_+_201709051_201709079	0.193797	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg19_v1_chr17_+_72581056_72581056	0.19373	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg19_v1_chrX_-_72299224_72299350	0.193404	SOX2.p2	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A
hg19_v1_chr10_+_99400469_99400499	0.193381	SOX2.p2	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr12_-_11422640_11422640	0.193293	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg19_v1_chr3_+_89156673_89156770	0.193285	SOX2.p2	AF213459|EPHA3|2042|EPH receptor A3	NM_005233|EPHA3|2042|EPH receptor A3	NM_182644|EPHA3|2042|EPH receptor A3	BC063282|EPHA3|2042|EPH receptor A3
hg19_v1_chrX_+_102611379_102611462	0.193265	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr12_-_58146108_58146108	0.19299	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chrX_-_151619669_151619830	0.192354	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg19_v1_chr9_-_21228132_21228313	0.192297	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg19_v1_chr22_+_39410286_39410366	0.192267	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v1_chr5_-_150537306_150537333	0.192254	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg19_v1_chr6_-_66417069_66417117	0.192221	SOX2.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	AB593112|EYS|346007|eyes shut homolog (Drosophila)	AB593114|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg19_v1_chr7_-_150780412_150780569	0.192085	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg19_v1_chr8_-_93115453_93115457	0.19195	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr2_-_209028288_209028365	0.191888	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg19_v1_chr7_+_150076405_150076449	0.191658	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg19_v1_chr12_-_498256_498425	0.191618	SOX2.p2	AK225060|KDM5A|5927|lysine (K)-specific demethylase 5A	BC110916|KDM5A|5927|lysine (K)-specific demethylase 5A	S66431|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307580|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307689|KDM5A|5927|lysine (K)-specific demethylase 5A
hg19_v1_chrX_-_15872938_15872938	0.19158	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr7_+_153584383_153584418	0.191579	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr1_-_201476218_201476240	0.191568	SOX2.p2	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr19_+_51293671_51293671	0.190976	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg19_v1_chr13_-_48987017_48987244	0.190495	SOX2.p2	AK223389|LPAR6|10161|lysophosphatidic acid receptor 6	BC070295|LPAR6|10161|lysophosphatidic acid receptor 6	BC054346|LPAR6|10161|lysophosphatidic acid receptor 6	BC040850|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr12_-_11244828_11244911	0.190455	SOX2.p2	HQ258369|TAS2R31|259290|taste receptor, type 2, member 31	BC117423|TAS2R43|259289|taste receptor, type 2, member 43	NM_176884|TAS2R43|259289|taste receptor, type 2, member 43
hg19_v1_chr13_+_30002776_30002845	0.190067	SOX2.p2	BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2	NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2	AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2
hg19_v1_chr8_-_93075190_93075190	0.189315	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr6_-_31774725_31774765	0.189184	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr22_+_38864015_38864237	0.189093	SOX2.p2	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v1_chr13_+_58205788_58205788	0.188896	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr4_+_40198526_40198757	0.188807	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg19_v1_chr12_-_118406027_118406027	0.188649	SOX2.p2	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg19_v1_chr1_+_173684061_173684131	0.188303	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chrY_-_19992072_19992099	0.188257	SOX2.p2	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr8_-_119123804_119124118	0.187966	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg19_v1_chr6_-_90062450_90062581	0.187876	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr10_+_6244839_6244913	0.187783	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v1_chr9_+_130026755_130026860	0.187721	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg19_v1_chr17_-_17480778_17480778	0.187658	SOX2.p2	AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr14_+_103592663_103592873	0.187582	SOX2.p2	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2
hg19_v1_chr4_+_71226477_71226546	0.187579	SOX2.p2	AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A	NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg19_v1_chr20_-_34195409_34195436	0.187265	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg19_v1_chr6_-_32160637_32160715	0.187109	SOX2.p2	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chr8_+_145064167_145064229	0.187024	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr20_+_35974458_35974556	0.186932	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg19_v1_chr3_-_124842442_124842468	0.186806	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr9_-_129870311_129870393	0.186706	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg19_v1_chr3_-_157221127_157221135	0.186586	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr2_+_11674241_11674241	0.186502	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr9_+_4839763_4839773	0.18647	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg19_v1_chr17_+_39405938_39405945	0.186031	SOX2.p2	AJ406948|KRTAP9-4|85280|keratin associated protein 9-4	NM_033191|KRTAP9-4|85280|keratin associated protein 9-4	BC121094|KRTAP9-4|85280|keratin associated protein 9-4
hg19_v1_chr2_+_54683276_54683948	0.185904	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg19_v1_chr17_-_4269814_4270002	0.185673	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr11_-_107729492_107729519	0.185627	SOX2.p2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr4_-_110624550_110624632	0.185394	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg19_v1_chr3_-_49893885_49894006	0.185262	SOX2.p2	AB451320|TRAIP|10293|TRAF interacting protein	AB451449|TRAIP|10293|TRAF interacting protein	EF036504|TRAIP|10293|TRAF interacting protein	AK225873|TRAIP|10293|TRAF interacting protein	BC000310|TRAIP|10293|TRAF interacting protein	BC019283|TRAIP|10293|TRAF interacting protein	AK292172|TRAIP|10293|TRAF interacting protein	NM_005879|TRAIP|10293|TRAF interacting protein	U77845|TRAIP|10293|TRAF interacting protein	AK295780|TRAIP|10293|TRAF interacting protein
hg19_v1_chr17_-_2240677_2240800	0.18514	SOX2.p2	NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v1_chr16_-_20416032_20416058	0.184214	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg19_v1_chr14_+_24540742_24540797	0.184023	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg19_v1_chr1_-_17766142_17766208	0.183616	SOX2.p2	AB040903|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr7_-_76829109_76829164	0.183493	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg19_v1_chr6_+_168418552_168418580	0.182951	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg19_v1_chr7_-_115608366_115608366	0.182945	SOX2.p2	AJ608795|TFEC|22797|transcription factor EC	NM_001244583|TFEC|22797|transcription factor EC
hg19_v1_chr2_+_176969233_176969249	0.182842	SOX2.p2	
hg19_v1_chr15_-_23932364_23932396	0.182761	SOX2.p2	
hg19_v1_chr15_+_43663350_43663552	0.182487	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg19_v1_chrX_+_37850069_37850092	0.182326	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg19_v1_chr2_-_163099877_163100044	0.182263	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg19_v1_chr17_-_4458618_4458730	0.182206	SOX2.p2	EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a	BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a	AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a	AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a	AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a	AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a
hg19_v1_chr4_-_24586015_24586137	0.182155	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr4_-_111119752_111119819	0.182103	SOX2.p2	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6	AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6
hg19_v1_chr3_+_143692166_143692268	0.182004	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg19_v1_chr12_+_45686465_45686465	0.181592	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg19_v1_chr6_-_53213699_53213743	0.181297	SOX2.p2	AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5	AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5	BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5	BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr3_-_52273142_52273182	0.18068	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg19_v1_chrY_+_27768241_27768308	0.180652	SOX2.p2	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1	BC033041|CDY1|9085|chromodomain protein, Y-linked, 1	NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1	NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1	AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1	AF080597|CDY1|9085|chromodomain protein, Y-linked, 1
hg19_v1_chr8_+_126010719_126010747	0.180376	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg19_v1_chr11_+_118992232_118992335	0.180119	SOX2.p2	NM_001243259|HINFP|25988|histone H4 transcription factor	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg19_v1_chr5_-_83016850_83017019	0.179935	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg19_v1_chr6_-_89927495_89927495	0.179682	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr7_-_128045995_128046039	0.179475	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v1_chr6_+_116832807_116832835	0.17919	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg19_v1_chr2_+_166095911_166095954	0.179044	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chr18_+_55888838_55888862	0.178749	SOX2.p2	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr9_-_140142165_140142221	0.178636	SOX2.p2	HQ258370|FAM166A|401565|family with sequence similarity 166, member A	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg19_v1_chr20_+_31805118_31805157	0.177829	SOX2.p2	BC041904|BPIFA3|128861|BPI fold containing family A, member 3	NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3	NM_178466|BPIFA3|128861|BPI fold containing family A, member 3	BC066354|BPIFA3|128861|BPI fold containing family A, member 3
hg19_v1_chr7_-_36764000_36764153	0.177211	SOX2.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg19_v1_chr22_+_38597938_38598017	0.177135	SOX2.p2	NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr14_+_62164339_62164339	0.176911	SOX2.p2	FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr16_-_21663962_21663991	0.176841	SOX2.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr19_+_56111600_56111751	0.176812	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg19_v1_chrX_-_33229428_33229672	0.176802	SOX2.p2	S60972|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg19_v1_chr9_+_71819926_71820077	0.176767	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg19_v1_chr2_-_44065888_44066003	0.176734	SOX2.p2	BC111541|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	BC111542|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AF320293|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AF312715|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	NM_022436|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AK091997|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5
hg19_v1_chr1_+_145883867_145883867	0.176482	SOX2.p2	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C
hg19_v1_chr17_-_10372875_10372875	0.176444	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr7_-_104909442_104909525	0.176355	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr13_-_45775174_45775174	0.176324	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg19_v1_chrX_+_11311532_11311553	0.176212	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg19_v1_chr21_-_33074101_33074136	0.176107	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr9_-_36400212_36400295	0.175861	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr11_+_71259465_71259703	0.174381	SOX2.p2	NM_005553|KRTAP5-9|3846|keratin associated protein 5-9	X63755|KRTAP5-9|3846|keratin associated protein 5-9	BC101744|KRTAP5-9|3846|keratin associated protein 5-9	AB126078|KRTAP5-9|3846|keratin associated protein 5-9	BC069531|KRTAP5-9|3846|keratin associated protein 5-9
hg19_v1_chr5_+_179159799_179159905	0.173765	SOX2.p2	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg19_v1_chr7_-_108142934_108143010	0.173659	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg19_v1_chrX_+_119737743_119737834	0.173548	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr7_+_129847699_129847717	0.173524	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg19_v1_chr14_-_58893867_58893909	0.173416	SOX2.p2	AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr8_-_110342107_110342162	0.173285	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg19_v1_chr5_+_70196489_70196677	0.172696	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr17_+_18768781_18768861	0.172306	SOX2.p2	NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v1_chr2_-_204399906_204400387	0.171719	SOX2.p2	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v1_chr6_+_131571298_131571298	0.171502	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg19_v1_chr12_-_6740814_6740817	0.171448	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg19_v1_chr12_-_96184346_96184393	0.17138	SOX2.p2	AF297711|NTN4|59277|netrin 4	AK226070|NTN4|59277|netrin 4	AK315796|NTN4|59277|netrin 4
hg19_v1_chr19_-_45996470_45996517	0.171129	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg19_v1_chr8_-_38325825_38326072	0.171074	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr20_+_61147924_61147984	0.170806	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg19_v1_chr2_+_219283809_219283872	0.17074	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg19_v1_chr1_-_26232890_26232992	0.17069	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr14_+_67656109_67656177	0.170643	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg19_v1_chr3_+_149689065_149689096	0.170431	SOX2.p2	BC012363|LOC646903|646903|uncharacterized LOC646903
hg19_v1_chr14_-_99737821_99737959	0.170131	SOX2.p2	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v1_chr1_-_167883243_167883452	0.16998	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg19_v1_chr8_+_145064238_145064316	0.169858	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr19_-_14629235_14629346	0.169444	SOX2.p2	
hg19_v1_chr5_+_161274939_161274939	0.169398	SOX2.p2	NM_001127644|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr4_-_53617781_53617806	0.169355	SOX2.p2	NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1
hg19_v1_chr14_-_50999178_50999442	0.169114	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v1_chr22_+_40297085_40297163	0.168808	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr17_-_18950238_18950335	0.168616	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein
hg19_v1_chr17_-_10325266_10325266	0.168556	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg19_v1_chr11_-_35440514_35440909	0.168525	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr1_-_58716207_58716212	0.168317	SOX2.p2	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)	NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr16_-_3068161_3068187	0.168295	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg19_v1_chr7_+_155250705_155250823	0.167921	SOX2.p2	BC104970|EN2|2020|engrailed homeobox 2	BC104972|EN2|2020|engrailed homeobox 2	NM_001427|EN2|2020|engrailed homeobox 2
hg19_v1_chr17_-_5372235_5372379	0.167533	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_001199699|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr4_+_17616246_17616286	0.167522	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg19_v1_chr15_+_41136622_41136780	0.16745	SOX2.p2	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr20_+_30598244_30598252	0.167119	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg19_v1_chrY_+_20297334_20297462	0.167077	SOX2.p2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2
hg19_v1_chr1_-_154155680_154155684	0.166933	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg19_v1_chr3_+_191046873_191047460	0.166784	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg19_v1_chr4_-_109089444_109090154	0.166701	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr10_+_60936508_60936613	0.166527	SOX2.p2	BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr11_+_7273141_7273246	0.166291	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg19_v1_chr5_-_83680590_83680738	0.165944	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr9_-_134955243_134955257	0.165838	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr1_-_57888785_57888871	0.165698	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr2_-_202507348_202507439	0.165528	SOX2.p2	AK090601|TMEM237|65062|transmembrane protein 237	BC029611|TMEM237|65062|transmembrane protein 237	NM_152388|TMEM237|65062|transmembrane protein 237
hg19_v1_chr7_-_26232148_26232154	0.165285	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr6_-_150057659_150057707	0.16524	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg19_v1_chr10_+_29577989_29578044	0.165074	SOX2.p2	NM_032517|LYZL1|84569|lysozyme-like 1	BC021730|LYZL1|84569|lysozyme-like 1	AY358694|LYZL1|84569|lysozyme-like 1
hg19_v1_chrY_+_15016018_15016018	0.164984	SOX2.p2	BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
hg19_v1_chr21_-_35014013_35014159	0.164846	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chr20_+_34203746_34203925	0.164584	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg19_v1_chr1_+_163038564_163038763	0.164508	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr5_+_140797270_140797426	0.164447	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr6_+_36210944_36210979	0.164323	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg19_v1_chr5_+_161275185_161275229	0.164229	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr1_-_200377488_200377589	0.163784	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg19_v1_chr7_+_26242007_26242107	0.163769	SOX2.p2	
hg19_v1_chr9_+_70971814_70971814	0.163749	SOX2.p2	BC033073|PGM5|5239|phosphoglucomutase 5	NM_021965|PGM5|5239|phosphoglucomutase 5
hg19_v1_chr12_-_11286842_11286842	0.163278	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg19_v1_chr14_-_64761077_64761127	0.163182	SOX2.p2	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)	AF051428|ESR2|2100|estrogen receptor 2 (ER beta)	AF060555|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)
hg19_v1_chr2_+_182850550_182850748	0.162537	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v1_chr2_-_169746921_169746962	0.16244	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr9_-_74979625_74979825	0.162267	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr1_-_43919547_43919659	0.161901	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg19_v1_chr21_-_39870303_39870427	0.161855	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg19_v1_chr15_-_34635306_34635364	0.161666	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg19_v1_chr11_+_69455938_69455962	0.161602	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg19_v1_chr17_+_37896219_37896219	0.16155	SOX2.p2	AK290115|GRB7|2886|growth factor receptor-bound protein 7	NM_001242443|GRB7|2886|growth factor receptor-bound protein 7
hg19_v1_chr10_-_119805673_119806415	0.161252	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr22_+_27017927_27017935	0.160638	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg19_v1_chr1_-_169555624_169555705	0.1606	SOX2.p2	AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)	M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)	M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)
hg19_v1_chr3_-_126327397_126327397	0.160553	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr14_-_45603658_45603667	0.160449	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chrY_-_26194115_26194182	0.160383	SOX2.p2	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1	AF080597|CDY1|9085|chromodomain protein, Y-linked, 1	AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B	BC033041|CDY1|9085|chromodomain protein, Y-linked, 1	NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1	NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1
hg19_v1_chr11_-_66206260_66206313	0.160362	SOX2.p2	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg19_v1_chr21_-_34185943_34186052	0.15968	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg19_v1_chr6_+_123100860_123100939	0.159515	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr6_+_31683084_31683132	0.159444	SOX2.p2	AJ315535|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315536|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315537|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	BC125138|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	NM_021246|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D
hg19_v1_chr11_-_64546201_64546315	0.159279	SOX2.p2	L49345|SF1|7536|splicing factor 1	L49380|SF1|7536|splicing factor 1	BC032676|SF1|7536|splicing factor 1	BC020217|SF1|7536|splicing factor 1	BC069273|SF1|7536|splicing factor 1	D26120|SF1|7536|splicing factor 1	D26121|SF1|7536|splicing factor 1	AK301803|SF1|7536|splicing factor 1	BC034451|SF1|7536|splicing factor 1	NM_004630|SF1|7536|splicing factor 1	NM_201995|SF1|7536|splicing factor 1	NM_201997|SF1|7536|splicing factor 1	NM_201998|SF1|7536|splicing factor 1
hg19_v1_chr12_-_11002051_11002074	0.158685	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_001098538|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg19_v1_chr2_+_102927961_102928022	0.158494	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg19_v1_chr1_+_244999007_244999024	0.158476	SOX2.p2	
hg19_v1_chr4_+_84457390_84457772	0.158427	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v1_chr17_+_7258454_7258496	0.158139	SOX2.p2	BC040900|TMEM95|339168|transmembrane protein 95	AY358218|TMEM95|339168|transmembrane protein 95	BC107110|TMEM95|339168|transmembrane protein 95	NM_198154|TMEM95|339168|transmembrane protein 95
hg19_v1_chr17_+_66031885_66031892	0.157932	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr14_-_58618916_58618932	0.157836	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr1_+_43766565_43766742	0.157822	SOX2.p2	NM_001253357|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg19_v1_chr17_-_39942937_39943029	0.157659	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg19_v1_chr9_-_86082656_86082663	0.157632	SOX2.p2	NM_001244960|FRMD3|257019|FERM domain containing 3	AY137774|FRMD3|257019|FERM domain containing 3
hg19_v1_chr5_-_147162264_147162347	0.157317	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr15_+_94899163_94899455	0.157285	SOX2.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg19_v1_chr10_-_18948166_18948228	0.156847	SOX2.p2	
hg19_v1_chr8_+_126010748_126010804	0.156735	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg19_v1_chr22_-_33402648_33402805	0.156585	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	HQ258468|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg19_v1_chr2_+_11682836_11682850	0.156566	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr7_-_27205123_27205130	0.156494	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg19_v1_chr9_-_74979829_74980371	0.156432	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr22_+_40297183_40297312	0.156339	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr3_+_108855560_108855566	0.156147	SOX2.p2	AK026416|FLJ22763|401081|uncharacterized LOC401081
hg19_v1_chr4_+_39063851_39063851	0.15523	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg19_v1_chr5_+_149980627_149980657	0.155216	SOX2.p2	AL831818|SYNPO|11346|synaptopodin	NM_001166208|SYNPO|11346|synaptopodin
hg19_v1_chr6_+_126661221_126661319	0.155214	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr5_+_112073555_112073591	0.154516	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg19_v1_chr11_+_33037727_33037727	0.154129	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg19_v1_chr1_+_199996729_199997010	0.153952	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg19_v1_chr12_+_57943843_57944051	0.153869	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr4_-_24586145_24586175	0.153864	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr1_+_33004771_33004771	0.153651	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr17_-_46682333_46682356	0.153561	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg19_v1_chrX_-_110654373_110654373	0.153543	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg19_v1_chr17_+_15602890_15603036	0.153426	SOX2.p2	NM_001130842|ZNF286A|57335|zinc finger protein 286A	NM_020652|ZNF286A|57335|zinc finger protein 286A
hg19_v1_chr3_+_178276487_178276617	0.153081	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr12_-_10022457_10022457	0.152964	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr4_+_15341559_15341611	0.152849	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr8_+_104831415_104831735	0.152739	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chr1_-_40042072_40042150	0.152723	SOX2.p2	BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v1_chr4_-_140477290_140477576	0.152415	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg19_v1_chr3_-_193096513_193096631	0.151607	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg19_v1_chr5_-_141338626_141338626	0.151554	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg19_v1_chr15_+_80390757_80390757	0.151007	SOX2.p2	NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr3_+_157827937_157827944	0.150988	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr22_+_23522699_23522728	0.150173	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg19_v1_chr20_-_44144263_44144263	0.149998	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg19_v1_chr11_+_69455884_69455937	0.149895	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg19_v1_chr11_-_134281725_134281917	0.149761	SOX2.p2	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v1_chr10_+_7745284_7745320	0.14947	SOX2.p2	AK291379|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr20_+_61147659_61147659	0.149441	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg19_v1_chr11_-_117747331_117747447	0.149055	SOX2.p2	AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6	AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6	AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr5_-_78282356_78282356	0.148866	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg19_v1_chr19_+_16178170_16178350	0.148823	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr3_-_56698073_56698073	0.148633	SOX2.p2	BC029354|FAM208A|23272|family with sequence similarity 208, member A	NM_015224|FAM208A|23272|family with sequence similarity 208, member A
hg19_v1_chr16_-_51184507_51184507	0.148566	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg19_v1_chr1_-_161168816_161168846	0.148487	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg19_v1_chr14_+_24521099_24521253	0.148474	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chr12_-_11139510_11139510	0.148468	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg19_v1_chr11_+_18433845_18433930	0.14841	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg19_v1_chr8_-_7332603_7332603	0.148373	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg19_v1_chr15_+_75074714_75074998	0.148228	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg19_v1_chrX_-_47489703_47489703	0.14813	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg19_v1_chr2_-_241759627_241759724	0.148103	SOX2.p2	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A	NM_001244008|KIF1A|547|kinesin family member 1A	NM_004321|KIF1A|547|kinesin family member 1A
hg19_v1_chr12_+_52056547_52056601	0.147677	SOX2.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v1_chr7_-_14029286_14029323	0.147636	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg19_v1_chr12_+_9822205_9822330	0.147621	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg19_v1_chr6_+_56911422_56911552	0.14754	SOX2.p2	BC012011|KIAA1586|57691|KIAA1586	BC029372|KIAA1586|57691|KIAA1586	AK295519|KIAA1586|57691|KIAA1586	AK290988|KIAA1586|57691|KIAA1586
hg19_v1_chr14_+_96846021_96846021	0.147474	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr5_-_35118223_35118223	0.147429	SOX2.p2	NM_001204314|PRLR|5618|prolactin receptor	NM_001204315|PRLR|5618|prolactin receptor	NM_001204316|PRLR|5618|prolactin receptor	NM_001204317|PRLR|5618|prolactin receptor	NM_001204318|PRLR|5618|prolactin receptor
hg19_v1_chrX_+_12993224_12993256	0.147088	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr5_+_140800613_140800794	0.146515	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr10_-_115934363_115934363	0.146301	SOX2.p2	NM_018017|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr5_-_176739291_176739291	0.145904	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr1_+_40915773_40915827	0.145763	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg19_v1_chr3_+_114012832_114012875	0.145308	SOX2.p2	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains
hg19_v1_chr14_-_22005035_22005336	0.145303	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr12_-_113573267_113573558	0.145051	SOX2.p2	DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg19_v1_chr7_+_93535819_93535819	0.144831	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v1_chr4_+_90816002_90816122	0.144734	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1	HQ258009|MMRN1|22915|multimerin 1
hg19_v1_chr12_-_10955168_10955225	0.144616	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg19_v1_chr2_+_211421322_211421457	0.144569	SOX2.p2	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr12_-_56615679_56615772	0.144257	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr2_+_219433517_219433677	0.14425	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg19_v1_chr6_+_39760138_39760141	0.143937	SOX2.p2	
hg19_v1_chr14_-_58894217_58894231	0.143787	SOX2.p2	BC054875|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC020213|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_012460|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr3_+_157827849_157827933	0.143666	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr1_+_31886659_31886715	0.143463	SOX2.p2	AK093784|SERINC2|347735|serine incorporator 2	AK316357|SERINC2|347735|serine incorporator 2	NM_001199039|SERINC2|347735|serine incorporator 2	NM_018565|SERINC2|347735|serine incorporator 2	AK296118|SERINC2|347735|serine incorporator 2
hg19_v1_chr3_+_39449110_39449174	0.143396	SOX2.p2	BC071970|RPSA|3921|ribosomal protein SA	J03799|RPSA|3921|ribosomal protein SA	NM_001012321|RPSA|3921|ribosomal protein SA	BC068062|RPSA|3921|ribosomal protein SA	BC008867|RPSA|3921|ribosomal protein SA	S37431|RPSA|3921|ribosomal protein SA	DQ891146|RPSA|3921|ribosomal protein SA	DQ894326|RPSA|3921|ribosomal protein SA	BT007219|RPSA|3921|ribosomal protein SA	X61156|RPSA|3921|ribosomal protein SA
hg19_v1_chr8_-_124054491_124054524	0.143279	SOX2.p2	BC002457|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr6_+_25962978_25963089	0.143062	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg19_v1_chr5_-_150537261_150537302	0.142885	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg19_v1_chr3_-_57312979_57312979	0.142717	SOX2.p2	AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14	BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg19_v1_chr22_-_44708730_44708730	0.142651	SOX2.p2	NM_001099294|KIAA1644|85352|KIAA1644
hg19_v1_chr6_+_112375277_112375558	0.142614	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg19_v1_chr8_+_145064583_145064643	0.142369	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr18_-_64271215_64271408	0.142088	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chr17_-_76124791_76124886	0.142066	SOX2.p2	AK096076|TMC6|11322|transmembrane channel-like 6	AY099356|TMC6|11322|transmembrane channel-like 6	AY099357|TMC6|11322|transmembrane channel-like 6	AK303584|TMC6|11322|transmembrane channel-like 6	AK310734|TMC6|11322|transmembrane channel-like 6	NM_001127198|TMC6|11322|transmembrane channel-like 6	AK021738|TMC6|11322|transmembrane channel-like 6
hg19_v1_chr13_-_103054027_103054123	0.142019	SOX2.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg19_v1_chr8_-_121823696_121823826	0.141181	SOX2.p2	AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v1_chr17_-_26697293_26697303	0.141124	SOX2.p2	BC005046|VTN|7448|vitronectin
hg19_v1_chr20_+_35202956_35202956	0.141038	SOX2.p2	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2	NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough
hg19_v1_chr14_+_32183774_32183774	0.140909	SOX2.p2	AK093789|NUBPL|80224|nucleotide binding protein-like	NM_001201574|NUBPL|80224|nucleotide binding protein-like
hg19_v1_chr19_-_6767417_6767598	0.140464	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg19_v1_chr5_+_140739589_140739702	0.140427	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr11_+_44117746_44117772	0.140395	SOX2.p2	NM_000401|EXT2|2132|exostosin 2	BX648142|EXT2|2132|exostosin 2
hg19_v1_chr16_+_88636810_88636811	0.140322	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr14_-_23446431_23446431	0.140204	SOX2.p2	AK096128|AJUBA|84962|ajuba LIM protein	NM_198086|AJUBA|84962|ajuba LIM protein
hg19_v1_chr14_+_52456322_52456357	0.140174	SOX2.p2	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr2_-_38830014_38830067	0.140093	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr4_+_54292035_54292107	0.140075	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr7_+_129932973_129933019	0.140021	SOX2.p2	AK290993|CPA4|51200|carboxypeptidase A4	NM_001163446|CPA4|51200|carboxypeptidase A4	NM_016352|CPA4|51200|carboxypeptidase A4	BC052289|CPA4|51200|carboxypeptidase A4	AK310933|CPA4|51200|carboxypeptidase A4	AK298553|CPA4|51200|carboxypeptidase A4	AK298550|CPA4|51200|carboxypeptidase A4	AK299023|CPA4|51200|carboxypeptidase A4	AY358699|CPA4|51200|carboxypeptidase A4	AF095719|CPA4|51200|carboxypeptidase A4	HQ448429|CPA4|51200|carboxypeptidase A4
hg19_v1_chr12_-_14967091_14967115	0.139921	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg19_v1_chr4_+_88720701_88720741	0.139868	SOX2.p2	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg19_v1_chr11_-_71823737_71823825	0.139856	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr10_-_17171789_17171878	0.139738	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr6_+_21593963_21594781	0.139504	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr5_+_92920592_92920744	0.139463	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chrX_+_72223351_72223481	0.139452	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg19_v1_chr19_+_3880675_3880686	0.139442	SOX2.p2	BC026217|ATCAY|85300|ataxia, cerebellar, Cayman type	AK027889|ATCAY|85300|ataxia, cerebellar, Cayman type	AK092309|ATCAY|85300|ataxia, cerebellar, Cayman type	AK299522|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr15_-_34502188_34502262	0.13917	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29
hg19_v1_chr7_+_94292737_94292755	0.139139	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chrX_-_15872871_15872881	0.138989	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr3_+_44690216_44690276	0.138792	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg19_v1_chr12_+_54674531_54674593	0.13866	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg19_v1_chr22_+_17640241_17640288	0.13863	SOX2.p2	AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)
hg19_v1_chr3_-_116164321_116164341	0.138561	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr1_-_173020011_173020102	0.138432	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg19_v1_chr5_+_60933635_60933635	0.138386	SOX2.p2	AK094862|C5orf64|285668|chromosome 5 open reading frame 64	NM_173667|C5orf64|285668|chromosome 5 open reading frame 64
hg19_v1_chr1_+_93544786_93544881	0.137638	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg19_v1_chrX_+_136648313_136648345	0.137357	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3	NM_003413|ZIC3|7547|Zic family member 3
hg19_v1_chr2_+_79347487_79347586	0.137353	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg19_v1_chr3_+_19988861_19988941	0.137029	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr15_-_88799961_88799971	0.136836	SOX2.p2	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3
hg19_v1_chr7_-_142583260_142583506	0.136792	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg19_v1_chr12_-_53045947_53045958	0.136755	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg19_v1_chr7_+_94292816_94292946	0.136587	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr6_+_119215240_119215577	0.136446	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chr1_-_38019828_38019954	0.13642	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg19_v1_chr20_-_43150592_43150672	0.136187	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg19_v1_chr3_-_119379269_119379436	0.136058	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg19_v1_chr17_-_36981552_36981607	0.135937	SOX2.p2	AK000298|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK296115|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK225373|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	CR749362|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC008833|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_017748|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK302983|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v1_chr6_-_29323971_29324053	0.135543	SOX2.p2	BC069149|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	AJ459859|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	NM_030876|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1
hg19_v1_chr3_+_183415540_183415704	0.135192	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg19_v1_chr2_+_48844936_48845014	0.135056	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg19_v1_chr5_-_64777703_64777746	0.13503	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg19_v1_chr14_-_23451704_23451847	0.134842	SOX2.p2	BC034968|AJUBA|84962|ajuba LIM protein	NM_032876|AJUBA|84962|ajuba LIM protein
hg19_v1_chr11_+_44117098_44117251	0.134823	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg19_v1_chr11_+_5710816_5710877	0.134797	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22	NM_001199573|TRIM22|10346|tripartite motif containing 22	NM_006074|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr18_-_21852189_21852195	0.13472	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr1_-_93399531_93399654	0.134647	SOX2.p2	
hg19_v1_chr5_+_72251753_72251817	0.134635	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg19_v1_chrX_+_69488154_69488201	0.134377	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg19_v1_chr11_-_3803310_3803346	0.134207	SOX2.p2	EF071958|NUP98|4928|nucleoporin 98kDa
hg19_v1_chr4_-_176733413_176733470	0.133988	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg19_v1_chrX_+_106161589_106161589	0.133887	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg19_v1_chr6_-_75915753_75915808	0.133693	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr10_+_60936346_60936431	0.133622	SOX2.p2	AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr7_+_120628722_120628808	0.133454	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr20_-_50179338_50179431	0.133374	SOX2.p2	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v1_chr20_-_1448336_1448336	0.13336	SOX2.p2	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg19_v1_chr14_+_65878579_65878661	0.133203	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr22_-_17073440_17073699	0.133067	SOX2.p2	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2
hg19_v1_chr5_-_138210992_138211035	0.133024	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr1_+_110882063_110882099	0.133	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr6_-_53213747_53213976	0.132645	SOX2.p2	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5	AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5	AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr1_+_153606457_153606546	0.132389	SOX2.p2	NM_001206612|CHTOP|26097|chromatin target of PRMT1	NM_001244664|CHTOP|26097|chromatin target of PRMT1	NM_015607|CHTOP|26097|chromatin target of PRMT1	AF261137|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chrX_+_70503469_70503494	0.131849	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr11_-_8190535_8190592	0.131813	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg19_v1_chr4_-_83347222_83347249	0.131792	SOX2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chrX_+_70503496_70503508	0.13161	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr3_+_25469833_25469901	0.131597	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr9_-_132586363_132586397	0.131476	SOX2.p2	BT006931|TOR1A|1861|torsin family 1, member A (torsin A)	DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)	DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)	BC014484|TOR1A|1861|torsin family 1, member A (torsin A)	AK314505|TOR1A|1861|torsin family 1, member A (torsin A)	AK075343|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr9_+_139221931_139222002	0.131416	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg19_v1_chr1_-_167522979_167523003	0.131386	SOX2.p2	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr14_-_54955664_54955707	0.131359	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chr5_+_180794268_180794287	0.13099	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg19_v1_chrX_+_140084755_140084858	0.130827	SOX2.p2	AF098307|SPANXB1|728695|SPANX family, member B1	AJ457796|SPANXF1|171490|SPANX family, member F1	NM_032461|SPANXB1|728695|SPANX family, member B1	NM_139019|SPANXF1|171490|SPANX family, member F1	NM_145664|SPANXB2|100133171|SPANX family, member B2	BC034472|SPANXB1|728695|SPANX family, member B1	BC137533|SPANXB1|728695|SPANX family, member B1	BC137536|SPANXB1|728695|SPANX family, member B1	DQ892330|SPANXB1|728695|SPANX family, member B1	DQ895534|SPANXB1|728695|SPANX family, member B1
hg19_v1_chr5_-_43313492_43313571	0.130728	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr8_+_79428335_79428335	0.130434	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v1_chr5_-_131879172_131879213	0.130299	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg19_v1_chr14_+_72398816_72398816	0.13009	SOX2.p2	AK294895|RGS6|9628|regulator of G-protein signaling 6	NM_001204423|RGS6|9628|regulator of G-protein signaling 6
hg19_v1_chr14_+_96829849_96829887	0.129859	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chrX_-_13338517_13338517	0.129342	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg19_v1_chr2_+_109204904_109205034	0.129305	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr12_-_371994_372038	0.129174	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg19_v1_chr3_-_194353908_194353945	0.129098	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44	HQ258241|TMEM44|93109|transmembrane protein 44
hg19_v1_chr19_-_46272102_46272128	0.129052	SOX2.p2	
hg19_v1_chr14_-_81687265_81687295	0.128994	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg19_v1_chr12_-_56615484_56615661	0.128992	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr5_+_94890777_94890982	0.12876	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K	HQ258292|ARSK|153642|arylsulfatase family, member K
hg19_v1_chr7_+_16566504_16566504	0.128661	SOX2.p2	NM_001195280|LRRC72|100506049|leucine rich repeat containing 72
hg19_v1_chr1_-_143767849_143767880	0.128445	SOX2.p2	HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg19_v1_chr10_-_128209996_128210009	0.128303	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg19_v1_chr10_-_75410778_75410799	0.128029	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg19_v1_chr5_+_140800536_140800602	0.127766	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr11_-_89224413_89224732	0.127642	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg19_v1_chr7_-_139477437_139478374	0.127579	SOX2.p2	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg19_v1_chr2_-_24307179_24307212	0.127392	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3
hg19_v1_chr6_+_84569427_84569501	0.126846	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr12_-_122296619_122296768	0.126835	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg19_v1_chr11_+_64018996_64019118	0.126616	SOX2.p2	BC146645|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC142681|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC032659|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	AB385031|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)
hg19_v1_chr16_+_56817367_56817412	0.126569	SOX2.p2	AK294176|NUP93|9688|nucleoporin 93kDa	NM_001242796|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr4_-_69536314_69536493	0.126081	SOX2.p2	U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v1_chr16_+_14294186_14294210	0.125192	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg19_v1_chr12_+_7045437_7045476	0.124856	SOX2.p2	
hg19_v1_chr7_+_50344255_50344452	0.124735	SOX2.p2	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg19_v1_chr13_-_48877796_48877822	0.124704	SOX2.p2	
hg19_v1_chr2_-_10952855_10952986	0.124644	SOX2.p2	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg19_v1_chr9_-_4726226_4726249	0.124288	SOX2.p2	NM_001199856|AK3|50808|adenylate kinase 3	AK124824|AK3|50808|adenylate kinase 3
hg19_v1_chr7_+_120628867_120628925	0.124048	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr11_+_9596233_9596233	0.123974	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg19_v1_chr4_+_74347461_74347479	0.123962	SOX2.p2	AK290556|AFM|173|afamin	NM_001133|AFM|173|afamin	BC109020|AFM|173|afamin	BC109021|AFM|173|afamin	L35486|AFM|173|afamin
hg19_v1_chr20_-_22564893_22564939	0.123913	SOX2.p2	BC006545|FOXA2|3170|forkhead box A2	BC019288|FOXA2|3170|forkhead box A2	DQ892883|FOXA2|3170|forkhead box A2	DQ896132|FOXA2|3170|forkhead box A2	AK301611|FOXA2|3170|forkhead box A2	BC011780|FOXA2|3170|forkhead box A2
hg19_v1_chr9_-_136857285_136857608	0.123675	SOX2.p2	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor	S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor
hg19_v1_chr3_-_186857188_186857324	0.123534	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chrX_+_148769902_148769902	0.123531	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg19_v1_chr3_-_50336662_50336902	0.123415	SOX2.p2	AF502909|HYAL3|8372|hyaluronoglucosaminidase 3	AF502910|HYAL3|8372|hyaluronoglucosaminidase 3	AF502911|HYAL3|8372|hyaluronoglucosaminidase 3	AF502912|HYAL3|8372|hyaluronoglucosaminidase 3	BC004483|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	BC005896|HYAL3|8372|hyaluronoglucosaminidase 3	BC035689|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313455|HYAL3|8372|hyaluronoglucosaminidase 3	AF040710|HYAL3|8372|hyaluronoglucosaminidase 3	BC051750|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313803|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_001200016|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_012191|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AF036035|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200030|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200031|HYAL3|8372|hyaluronoglucosaminidase 3	NM_001200032|HYAL3|8372|hyaluronoglucosaminidase 3	NM_003549|HYAL3|8372|hyaluronoglucosaminidase 3
hg19_v1_chr6_+_144185572_144185572	0.123254	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg19_v1_chr5_+_155753755_155753766	0.123091	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg19_v1_chr9_-_132586440_132586534	0.123027	SOX2.p2	NM_000113|TOR1A|1861|torsin family 1, member A (torsin A)	AK294677|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr1_-_23857711_23857711	0.123021	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg19_v1_chr12_+_12869818_12870435	0.122877	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v1_chr19_-_40724272_40724305	0.122675	SOX2.p2	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B	AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B	BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B	NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B
hg19_v1_chr2_+_45169036_45169057	0.122658	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg19_v1_chr12_-_57704245_57704245	0.122273	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg19_v1_chr5_+_176562084_176562141	0.122172	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr17_+_43971655_43971747	0.122069	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr3_-_57582866_57583075	0.122018	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chrX_-_63425484_63425669	0.122015	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg19_v1_chr17_-_39743085_39743146	0.121915	SOX2.p2	BT007186|KRT14|3861|keratin 14	DQ890733|KRT14|3861|keratin 14	DQ892997|KRT14|3861|keratin 14	DQ893905|KRT14|3861|keratin 14	BC042437|KRT14|3861|keratin 14	BC002690|KRT14|3861|keratin 14	BC019097|KRT14|3861|keratin 14	BC094830|KRT14|3861|keratin 14	NM_000526|KRT14|3861|keratin 14
hg19_v1_chr9_+_133710746_133710830	0.121858	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr12_-_6961044_6961229	0.121771	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr7_-_135613197_135613244	0.121582	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6
hg19_v1_chr1_-_16539103_16539165	0.121519	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg19_v1_chr7_-_115670774_115670798	0.121166	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC
hg19_v1_chr20_+_30697291_30697447	0.120994	SOX2.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr7_-_150924220_150924330	0.120659	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr8_-_93107881_93107881	0.120274	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr5_-_41510627_41510729	0.120143	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v1_chr4_+_109088677_109088691	0.120047	SOX2.p2	BC020624|LOC641518|641518|uncharacterized LOC641518
hg19_v1_chr2_-_128439359_128439359	0.119914	SOX2.p2	NM_001161404|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr5_+_35856990_35857077	0.119667	SOX2.p2	BC020717|IL7R|3575|interleukin 7 receptor	FJ529208|IL7R|3575|interleukin 7 receptor	NM_002185|IL7R|3575|interleukin 7 receptor	AK301220|IL7R|3575|interleukin 7 receptor	BC067537|IL7R|3575|interleukin 7 receptor	BC067538|IL7R|3575|interleukin 7 receptor	BC067539|IL7R|3575|interleukin 7 receptor	BC067540|IL7R|3575|interleukin 7 receptor	BC069999|IL7R|3575|interleukin 7 receptor	M29696|IL7R|3575|interleukin 7 receptor	AK315251|IL7R|3575|interleukin 7 receptor
hg19_v1_chrX_-_103174121_103174147	0.119546	SOX2.p2	AK026512|LOC100128594|100128594|uncharacterized LOC100128594
hg19_v1_chr17_-_38821286_38821415	0.119467	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr4_+_184580419_184580480	0.119397	SOX2.p2	NM_021942|C4orf41|60684|chromosome 4 open reading frame 41	NM_199053|C4orf41|60684|chromosome 4 open reading frame 41	AL833571|C4orf41|60684|chromosome 4 open reading frame 41	AK096345|C4orf41|60684|chromosome 4 open reading frame 41	BX648499|C4orf41|60684|chromosome 4 open reading frame 41	BX647127|C4orf41|60684|chromosome 4 open reading frame 41	BX538044|C4orf41|60684|chromosome 4 open reading frame 41	BC040530|C4orf41|60684|chromosome 4 open reading frame 41	BC051724|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr8_+_17433941_17433941	0.119294	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg19_v1_chr17_-_2996289_2996289	0.119054	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg19_v1_chr4_+_106629905_106630041	0.119042	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr13_+_32605436_32605446	0.118968	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg19_v1_chr4_+_118955499_118955652	0.118446	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v1_chr17_-_79829272_79829284	0.118379	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr8_-_30706532_30706607	0.118154	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg19_v1_chrX_+_47229981_47230066	0.118078	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg19_v1_chr19_-_36233311_36233350	0.117993	SOX2.p2	BC126481|IGFLR1|79713|IGF-like family receptor 1	BC126483|IGFLR1|79713|IGF-like family receptor 1	BC144205|IGFLR1|79713|IGF-like family receptor 1	AX775837|IGFLR1|79713|IGF-like family receptor 1	AK026226|IGFLR1|79713|IGF-like family receptor 1	NM_024660|IGFLR1|79713|IGF-like family receptor 1
hg19_v1_chr1_+_12185955_12186077	0.117872	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg19_v1_chr16_+_6069094_6069356	0.117537	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v1_chr6_-_88411984_88411992	0.117504	SOX2.p2	AK001204|AKIRIN2|55122|akirin 2	NM_018064|AKIRIN2|55122|akirin 2
hg19_v1_chr3_+_111717585_111717829	0.117499	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chr17_-_46692300_46692300	0.117432	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg19_v1_chr10_+_35535952_35535952	0.117046	SOX2.p2	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg19_v1_chr11_-_71781091_71781137	0.117035	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr10_+_13203547_13203589	0.116889	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr4_+_71768056_71768171	0.116838	SOX2.p2	NM_001244766|MOB1B|92597|MOB kinase activator 1B	NM_001244767|MOB1B|92597|MOB kinase activator 1B	NM_173468|MOB1B|92597|MOB kinase activator 1B	AK093545|MOB1B|92597|MOB kinase activator 1B	AK299481|MOB1B|92597|MOB kinase activator 1B	BC038112|MOB1B|92597|MOB kinase activator 1B	AK313513|MOB1B|92597|MOB kinase activator 1B
hg19_v1_chr3_-_71294229_71294315	0.116819	SOX2.p2	AK074321|FOXP1|27086|forkhead box P1	NM_001244814|FOXP1|27086|forkhead box P1
hg19_v1_chr1_+_159557615_159557711	0.116779	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg19_v1_chr2_+_234600320_234600347	0.116705	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v1_chr4_-_41216455_41216683	0.116701	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr5_+_61602065_61602100	0.116663	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr5_-_146833150_146833380	0.116647	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr11_+_747428_747440	0.116573	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg19_v1_chr6_+_31707724_31707866	0.11647	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6orf26|100532732|MSH5-C6orf26 readthrough (non-protein coding)	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg19_v1_chr8_+_82192717_82192830	0.116451	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chr2_-_55276288_55276333	0.116427	SOX2.p2	AK302741|RTN4|57142|reticulon 4	AF333336|RTN4|57142|reticulon 4	NM_207521|RTN4|57142|reticulon 4	AY123248|RTN4|57142|reticulon 4
hg19_v1_chr19_-_1652327_1652352	0.116253	SOX2.p2	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg19_v1_chr1_-_149859465_149859562	0.116219	SOX2.p2	NM_175065|HIST2H2AB|317772|histone cluster 2, H2ab	AK289725|HIST2H2BE|8349|histone cluster 2, H2be
hg19_v1_chr14_-_45603668_45603745	0.116052	SOX2.p2	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chr20_-_43150686_43150729	0.115963	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg19_v1_chr13_+_50025687_50025774	0.115803	SOX2.p2	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg19_v1_chr1_-_167523016_167523110	0.115794	SOX2.p2	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr3_-_194354304_194354423	0.115578	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg19_v1_chr11_+_92085261_92085261	0.115529	SOX2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr1_-_232651227_232651311	0.115459	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr1_+_209757044_209757077	0.115008	SOX2.p2	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG
hg19_v1_chr20_-_45927496_45927643	0.114862	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr12_-_81763127_81763192	0.11486	SOX2.p2	AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr13_+_53216564_53216567	0.114848	SOX2.p2	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2
hg19_v1_chr8_-_105601124_105601226	0.114829	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr13_-_52733995_52733995	0.114759	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr13_-_76055872_76056805	0.114696	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr20_+_57470200_57470251	0.114423	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg19_v1_chr1_+_159409511_159409548	0.114422	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg19_v1_chrX_-_154299253_154299642	0.114407	SOX2.p2	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1
hg19_v1_chr12_+_64238511_64238582	0.114403	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg19_v1_chr7_-_122839999_122840024	0.113883	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chrX_+_110339374_110339428	0.113769	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v1_chr8_+_23104153_23104332	0.113407	SOX2.p2	AK092500|CHMP7|91782|charged multivesicular body protein 7	AL833843|CHMP7|91782|charged multivesicular body protein 7	BC019110|CHMP7|91782|charged multivesicular body protein 7	AK296592|CHMP7|91782|charged multivesicular body protein 7	BC004344|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr7_+_129007942_129008030	0.113081	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr20_-_1600589_1600688	0.112974	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg19_v1_chr15_+_40886217_40886233	0.112731	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr17_-_2304217_2304415	0.112721	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr6_-_34101272_34101532	0.112661	SOX2.p2	EU432124|GRM4|2914|glutamate receptor, metabotropic 4	HQ258665|GRM4|2914|glutamate receptor, metabotropic 4	HQ258669|GRM4|2914|glutamate receptor, metabotropic 4	U92457|GRM4|2914|glutamate receptor, metabotropic 4	BC130526|GRM4|2914|glutamate receptor, metabotropic 4	BC130528|GRM4|2914|glutamate receptor, metabotropic 4	BC144057|GRM4|2914|glutamate receptor, metabotropic 4	NM_000841|GRM4|2914|glutamate receptor, metabotropic 4	X80818|GRM4|2914|glutamate receptor, metabotropic 4
hg19_v1_chr1_-_31712733_31712737	0.112611	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chrX_+_48114796_48114809	0.112175	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg19_v1_chr6_+_34204663_34204679	0.112172	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr7_+_144052432_144052574	0.111953	SOX2.p2	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr1_+_53527822_53527900	0.111911	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_001199081|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg19_v1_chr19_+_36132646_36132694	0.111894	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg19_v1_chr8_+_26240522_26240646	0.111822	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v1_chr6_+_25963398_25963419	0.111744	SOX2.p2	CR936707|TRIM38|10475|tripartite motif containing 38
hg19_v1_chr22_+_19711065_19711070	0.111711	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg19_v1_chr1_-_201476248_201476386	0.111673	SOX2.p2	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr6_+_84569394_84569410	0.111605	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr11_-_67141647_67141647	0.111578	SOX2.p2	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1	NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1
hg19_v1_chr15_-_50647604_50647604	0.11133	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr3_-_165555252_165555283	0.111231	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr4_+_119948273_119948273	0.111224	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg19_v1_chr1_-_201476241_201476245	0.111208	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr14_+_62162042_62162338	0.111097	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr2_+_203499819_203499900	0.111011	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr4_+_25314392_25314503	0.110898	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg19_v1_chr12_+_53845911_53845945	0.110691	SOX2.p2	BC035420|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr6_+_90604185_90604187	0.110631	SOX2.p2	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa	NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa
hg19_v1_chr10_-_118765087_118765138	0.110601	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chr10_-_102045948_102046113	0.110559	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v1_chr11_+_747424_747427	0.110184	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg19_v1_chr1_-_206785694_206785817	0.110175	SOX2.p2	DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D	DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D	BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D	BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D	AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D	BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D	AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D	AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D	AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D	AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D
hg19_v1_chr5_-_176037091_176037183	0.109257	SOX2.p2	BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1
hg19_v1_chr17_+_56769953_56770049	0.109019	SOX2.p2	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chr6_+_167704802_167704951	0.108319	SOX2.p2	AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)	BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)	BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)	BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)
hg19_v1_chr6_-_53013581_53013626	0.107967	SOX2.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg19_v1_chr2_+_27799388_27799392	0.107942	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg19_v1_chr10_-_69991854_69991869	0.107748	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)	AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)
hg19_v1_chr5_+_161275541_161275568	0.107725	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr2_-_3605918_3605924	0.107488	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg19_v1_chr20_-_1472168_1472232	0.107332	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr4_+_186990308_186990350	0.107276	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg19_v1_chr11_+_747449_747483	0.107243	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg19_v1_chr6_+_84569364_84569393	0.107122	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr16_-_4588738_4588846	0.107084	SOX2.p2	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr10_-_98031154_98031332	0.106541	SOX2.p2	AM180327|BLNK|29760|B-cell linker	AM180328|BLNK|29760|B-cell linker	AM180329|BLNK|29760|B-cell linker	AM180330|BLNK|29760|B-cell linker	AM180331|BLNK|29760|B-cell linker	AM180332|BLNK|29760|B-cell linker	AM180333|BLNK|29760|B-cell linker	AM180334|BLNK|29760|B-cell linker	AM180335|BLNK|29760|B-cell linker	AM180336|BLNK|29760|B-cell linker	AM180337|BLNK|29760|B-cell linker	AM180338|BLNK|29760|B-cell linker	AM180339|BLNK|29760|B-cell linker	AM180340|BLNK|29760|B-cell linker	AM180341|BLNK|29760|B-cell linker	AM180342|BLNK|29760|B-cell linker	AM180343|BLNK|29760|B-cell linker	AM180344|BLNK|29760|B-cell linker	AM180345|BLNK|29760|B-cell linker	AM180346|BLNK|29760|B-cell linker	BC018906|BLNK|29760|B-cell linker	BC110298|BLNK|29760|B-cell linker	AK027779|BLNK|29760|B-cell linker	AF068180|BLNK|29760|B-cell linker	AF068181|BLNK|29760|B-cell linker	AK225546|BLNK|29760|B-cell linker	NM_001114094|BLNK|29760|B-cell linker	NM_013314|BLNK|29760|B-cell linker
hg19_v1_chr2_-_151344145_151344183	0.106197	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg19_v1_chr11_-_62689011_62689135	0.105905	SOX2.p2	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1	NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1	AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1
hg19_v1_chr4_+_188916924_188916924	0.105867	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg19_v1_chr17_-_39316982_39316985	0.105858	SOX2.p2	AJ406936|KRTAP4-4|84616|keratin associated protein 4-4	NM_032524|KRTAP4-4|84616|keratin associated protein 4-4	AJ296168|KRTAP4-4|84616|keratin associated protein 4-4
hg19_v1_chr20_+_1246959_1246998	0.105812	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr22_-_38713217_38713366	0.105663	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr5_+_152870083_152870448	0.105605	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg19_v1_chr9_-_115774471_115774471	0.105564	SOX2.p2	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg19_v1_chr6_+_28249313_28249487	0.105546	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg19_v1_chr17_-_62050200_62050277	0.105473	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg19_v1_chr6_-_30655078_30655100	0.105316	SOX2.p2	AB075829|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_001134870|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	AK125639|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr2_+_79347610_79347631	0.105245	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg19_v1_chr17_+_7960201_7960203	0.105153	SOX2.p2	
hg19_v1_chr4_+_146031528_146031573	0.105123	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg19_v1_chr1_-_242162364_242162384	0.104944	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg19_v1_chr22_+_40322609_40322640	0.104934	SOX2.p2	AK303280|GRAP2|9402|GRB2-related adaptor protein 2	AK303657|GRAP2|9402|GRB2-related adaptor protein 2	AK312830|GRAP2|9402|GRB2-related adaptor protein 2	AK303470|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr5_-_142077508_142077634	0.104715	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr7_-_35293688_35293773	0.104681	SOX2.p2	NM_001077653|TBX20|57057|T-box 20	NM_001166220|TBX20|57057|T-box 20	DQ986374|TBX20|57057|T-box 20
hg19_v1_chrX_+_88002225_88002255	0.104639	SOX2.p2	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1	NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1	AK098646|CPXCR1|53336|CPX chromosome region, candidate 1	AK313768|CPXCR1|53336|CPX chromosome region, candidate 1	BC027614|CPXCR1|53336|CPX chromosome region, candidate 1
hg19_v1_chr15_-_41836442_41836456	0.103458	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr19_+_20011700_20011869	0.102973	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chr2_-_219157207_219157303	0.102594	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg19_v1_chr3_+_196466724_196466727	0.10246	SOX2.p2	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v1_chr3_+_155588447_155588463	0.102343	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr4_-_82393025_82393096	0.102292	SOX2.p2	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B	BC036784|RASGEF1B|153020|RasGEF domain family, member 1B	AK303625|RASGEF1B|153020|RasGEF domain family, member 1B	AK056257|RASGEF1B|153020|RasGEF domain family, member 1B	NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B
hg19_v1_chr4_+_119948322_119948327	0.102209	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg19_v1_chr19_+_15197790_15197876	0.10203	SOX2.p2	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1
hg19_v1_chr12_-_121734474_121734541	0.101982	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr6_+_14117486_14117486	0.10196	SOX2.p2	NM_001251901|CD83|9308|CD83 molecule
hg19_v1_chr11_+_120195837_120195837	0.101915	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg19_v1_chr11_-_10590078_10590364	0.101724	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg19_v1_chr3_+_155588479_155588659	0.101683	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr21_+_17102286_17102364	0.101662	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr12_+_15475445_15475658	0.101244	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg19_v1_chr12_+_75728418_75728507	0.101221	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg19_v1_chr18_-_52625278_52625278	0.101188	SOX2.p2	AK058097|CCDC68|80323|coiled-coil domain containing 68	NM_001143829|CCDC68|80323|coiled-coil domain containing 68
hg19_v1_chr8_-_82024277_82024352	0.101126	SOX2.p2	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v1_chr18_+_32556891_32557027	0.101091	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chr1_+_119911395_119911493	0.101	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg19_v1_chrX_-_46404821_46404891	0.100996	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg19_v1_chr1_+_955536_955550	0.100473	SOX2.p2	
hg19_v1_chr14_-_58618807_58618906	0.100468	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chr5_+_40909617_40909673	0.100404	SOX2.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr1_-_25747276_25747404	0.100111	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chr11_+_46740736_46740754	0.100013	SOX2.p2	NM_000506|F2|2147|coagulation factor II (thrombin)	AK303747|F2|2147|coagulation factor II (thrombin)	AK312965|F2|2147|coagulation factor II (thrombin)	AJ972449|F2|2147|coagulation factor II (thrombin)
hg19_v1_chr3_-_48470715_48471045	0.099728	SOX2.p2	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg19_v1_chr10_+_105727469_105727505	0.0996292	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg19_v1_chr9_-_4741049_4741068	0.0995189	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg19_v1_chr9_-_88969323_88969424	0.0995076	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr1_-_1243246_1243537	0.0994393	SOX2.p2	BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v1_chr9_+_35829208_35829279	0.0993041	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr1_+_25598883_25599101	0.0992951	SOX2.p2	AK297151|RHD|6007|Rh blood group, D antigen	NM_001127691|RHD|6007|Rh blood group, D antigen	NM_016124|RHD|6007|Rh blood group, D antigen	X63094|RHD|6007|Rh blood group, D antigen	BC139922|RHD|6007|Rh blood group, D antigen	AF510069|RHD|6007|Rh blood group, D antigen	AF510070|RHD|6007|Rh blood group, D antigen	AF312679|RHD|6007|Rh blood group, D antigen	Z97026|RHD|6007|Rh blood group, D antigen	DQ451878|RHD|6007|Rh blood group, D antigen	X63097|RHD|6007|Rh blood group, D antigen	AB018966|RHD|6007|Rh blood group, D antigen	AB018967|RHD|6007|Rh blood group, D antigen	AB018968|RHD|6007|Rh blood group, D antigen	AB018969|RHD|6007|Rh blood group, D antigen	AB037270|RHD|6007|Rh blood group, D antigen	AB046420|RHD|6007|Rh blood group, D antigen	AB049754|RHD|6007|Rh blood group, D antigen	AF037626|RHD|6007|Rh blood group, D antigen	AF177938|RHD|6007|Rh blood group, D antigen	AF187846|RHD|6007|Rh blood group, D antigen	AJ704215|RHD|6007|Rh blood group, D antigen	AM183924|RHD|6007|Rh blood group, D antigen	AY449381|RHD|6007|Rh blood group, D antigen	AY449382|RHD|6007|Rh blood group, D antigen	AY449383|RHD|6007|Rh blood group, D antigen	AY449384|RHD|6007|Rh blood group, D antigen	AY449385|RHD|6007|Rh blood group, D antigen	AY751491|RHD|6007|Rh blood group, D antigen	AY751492|RHD|6007|Rh blood group, D antigen	AY751493|RHD|6007|Rh blood group, D antigen	AY751494|RHD|6007|Rh blood group, D antigen	AY751495|RHD|6007|Rh blood group, D antigen	AY751496|RHD|6007|Rh blood group, D antigen	FR745438|RHD|6007|Rh blood group, D antigen	FR745439|RHD|6007|Rh blood group, D antigen	FR745440|RHD|6007|Rh blood group, D antigen	FR745441|RHD|6007|Rh blood group, D antigen	L08429|RHD|6007|Rh blood group, D antigen	S57971|RHD|6007|Rh blood group, D antigen	S70174|RHD|6007|Rh blood group, D antigen	S73913|RHD|6007|Rh blood group, D antigen	S78509|RHD|6007|Rh blood group, D antigen	S82449|RHD|6007|Rh blood group, D antigen	EU557240|RHD|6007|Rh blood group, D antigen	EU557241|RHD|6007|Rh blood group, D antigen	EU661905|RHD|6007|Rh blood group, D antigen	EU661906|RHD|6007|Rh blood group, D antigen
hg19_v1_chrX_+_30261847_30261847	0.0992015	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr1_+_166808721_166808770	0.0991275	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chrX_+_69353764_69353797	0.0988987	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg19_v1_chr3_+_44771097_44771123	0.0988905	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg19_v1_chr17_-_39780762_39780881	0.0986345	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg19_v1_chr14_-_80697396_80697396	0.0985115	SOX2.p2	AK292210|DIO2|1734|deiodinase, iodothyronine, type II	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II
hg19_v1_chr13_-_46679143_46679210	0.0984065	SOX2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg19_v1_chr11_+_6947591_6947693	0.0980744	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg19_v1_chr2_-_85788550_85788633	0.0979656	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr1_-_161102457_161102477	0.0979198	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg19_v1_chr10_+_60937226_60937350	0.0977866	SOX2.p2	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v1_chr4_-_174450529_174450571	0.0977857	SOX2.p2	BC101406|HAND2|9464|heart and neural crest derivatives expressed 2	BC101974|HAND2|9464|heart and neural crest derivatives expressed 2	BC109383|HAND2|9464|heart and neural crest derivatives expressed 2
hg19_v1_chr8_+_12869772_12869772	0.0977831	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg19_v1_chr14_-_69260630_69260630	0.0976944	SOX2.p2	NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr11_+_63753827_63753896	0.0975923	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr9_-_90749899_90749899	0.0975379	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg19_v1_chr17_+_38474544_38474551	0.0974246	SOX2.p2	AK130192|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr13_-_84456473_84456527	0.0973454	SOX2.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr15_-_91475653_91475820	0.0972753	SOX2.p2	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg19_v1_chr16_+_8807186_8807218	0.0972369	SOX2.p2	AK054834|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr4_-_120243257_120243315	0.0967282	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg19_v1_chr6_+_108881010_108881037	0.0965439	SOX2.p2	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3
hg19_v1_chr4_+_119947816_119947855	0.0965415	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg19_v1_chr15_+_45248902_45248914	0.0965329	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg19_v1_chr5_-_78281688_78281765	0.0963618	SOX2.p2	BC029051|ARSB|411|arylsulfatase B	NM_198709|ARSB|411|arylsulfatase B
hg19_v1_chr7_+_94024201_94024342	0.0962129	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr1_+_150039341_150039438	0.0961825	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr4_+_55095433_55095495	0.0960358	SOX2.p2	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg19_v1_chr9_-_132586398_132586415	0.0958617	SOX2.p2	BC000674|TOR1A|1861|torsin family 1, member A (torsin A)	AF007871|TOR1A|1861|torsin family 1, member A (torsin A)	AK056062|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr17_-_56494889_56494898	0.0955917	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg19_v1_chr22_+_31090792_31090898	0.0955828	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg19_v1_chr2_-_89292396_89292431	0.0955351	SOX2.p2	AY894991|IGKC|3514|immunoglobulin kappa constant	BC056256|IGKC|3514|immunoglobulin kappa constant
hg19_v1_chr5_+_61602236_61602304	0.0955085	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chrX_-_50557019_50557203	0.0954931	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg19_v1_chr5_+_40909558_40909606	0.0954619	SOX2.p2	AK290349|C7|730|complement component 7	Y11720|C7|730|complement component 7	NM_000587|C7|730|complement component 7	BC065305|C7|730|complement component 7	BC041807|C7|730|complement component 7
hg19_v1_chr1_+_110881944_110882045	0.0952415	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_001201545|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr15_-_35046688_35046781	0.095103	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg19_v1_chr12_-_10605928_10605978	0.0948341	SOX2.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg19_v1_chr3_+_196466806_196466845	0.0948036	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v1_chr20_-_43150673_43150683	0.0946024	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg19_v1_chr1_-_3447974_3448011	0.0945746	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg19_v1_chr7_-_44887620_44887654	0.0942999	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg19_v1_chr7_-_126892304_126892427	0.0942354	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr10_+_12110968_12111047	0.0941755	SOX2.p2	BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1
hg19_v1_chr12_-_52946734_52946930	0.0939354	SOX2.p2	AJ308601|KRT71|112802|keratin 71	EU832765|KRT71|112802|keratin 71	GQ129308|KRT71|112802|keratin 71	AJ308600|KRT71|112802|keratin 71	BC103917|KRT71|112802|keratin 71	BC103918|KRT71|112802|keratin 71	AJ308599|KRT71|112802|keratin 71	AK122795|KRT71|112802|keratin 71	NM_033448|KRT71|112802|keratin 71
hg19_v1_chr20_+_34995443_34995443	0.0936919	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg19_v1_chr6_+_42531951_42532057	0.0932061	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr7_-_143991255_143991279	0.0932025	SOX2.p2	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr17_-_79829237_79829260	0.0931356	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr7_+_77166750_77166863	0.0929975	SOX2.p2	NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr21_-_28339405_28339473	0.0929043	SOX2.p2	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v1_chr20_+_36149606_36149733	0.0928446	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr14_+_88471467_88471533	0.092772	SOX2.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg19_v1_chr3_-_178969402_178969417	0.0927525	SOX2.p2	AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr4_-_99851785_99851787	0.0926036	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr6_-_108582307_108582463	0.0925308	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chrY_+_3447081_3447285	0.0924854	SOX2.p2	AK292609|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	AF332223|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	NM_139214|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101143|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101146|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC128604|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked
hg19_v1_chr15_-_89764809_89765003	0.0924605	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg19_v1_chr15_-_91565685_91565855	0.0923661	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg19_v1_chr9_-_107690336_107690433	0.0922953	SOX2.p2	BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr2_-_217724781_217724781	0.0920501	SOX2.p2	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)	NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)
hg19_v1_chr19_-_48673559_48673604	0.0920227	SOX2.p2	M36067|LIG1|3978|ligase I, DNA, ATP-dependent	NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent	AK314210|LIG1|3978|ligase I, DNA, ATP-dependent	AK297296|LIG1|3978|ligase I, DNA, ATP-dependent	AK303644|LIG1|3978|ligase I, DNA, ATP-dependent	AB208791|LIG1|3978|ligase I, DNA, ATP-dependent	AK225863|LIG1|3978|ligase I, DNA, ATP-dependent	AK300370|LIG1|3978|ligase I, DNA, ATP-dependent
hg19_v1_chr3_-_57326709_57326709	0.0919284	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg19_v1_chr10_-_11653529_11653744	0.0917833	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr18_+_21269404_21269424	0.0917692	SOX2.p2	AK096422|LAMA3|3909|laminin, alpha 3
hg19_v1_chr19_-_7698569_7698633	0.091712	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg19_v1_chr4_-_120549827_120549980	0.0914584	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr18_-_37380249_37380287	0.0913473	SOX2.p2	AK090603|LOC647946|647946|uncharacterized LOC647946
hg19_v1_chr4_-_77328457_77328457	0.0908807	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg19_v1_chr22_-_26875376_26875550	0.0905739	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg19_v1_chr3_-_48936227_48936436	0.090481	SOX2.p2	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
hg19_v1_chr17_-_43510279_43510295	0.0902706	SOX2.p2	BC067345|ARHGAP27|201176|Rho GTPase activating protein 27	NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr20_-_42355566_42355641	0.0902473	SOX2.p2	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg19_v1_chr3_-_33700932_33701071	0.0902243	SOX2.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr4_+_123161119_123161129	0.0902179	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr19_+_56166418_56166470	0.0900215	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chr9_-_88969256_88969322	0.0897391	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr1_-_201475966_201475966	0.0893461	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr3_-_129158849_129158894	0.0890372	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr4_+_6717841_6717896	0.0888467	SOX2.p2	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr22_-_38713384_38713444	0.0887511	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr2_-_37899227_37899552	0.0886005	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr17_-_3571905_3571972	0.0884764	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr17_+_43299277_43299443	0.088455	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg19_v1_chr6_-_105627857_105627857	0.0883508	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr2_-_77749335_77749501	0.0882855	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg19_v1_chr7_+_91924291_91924419	0.0882151	SOX2.p2	
hg19_v1_chr17_-_4269610_4269812	0.0882117	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr1_-_23696267_23696358	0.0881978	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr1_-_108786663_108786702	0.0881063	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg19_v1_chr1_-_150241210_150241399	0.0880575	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr21_+_27107731_27107801	0.0879012	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr17_-_79829174_79829235	0.0879004	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr12_+_27397077_27397171	0.0878555	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr4_-_103266286_103266367	0.0877685	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr6_-_31509725_31509767	0.0876572	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr17_-_39041436_39041497	0.0876011	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg19_v1_chr16_-_15188089_15188167	0.0875722	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg19_v1_chr12_+_53845887_53845902	0.0875686	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr11_+_114271372_114271432	0.0875278	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr17_-_27467395_27467428	0.0872976	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg19_v1_chr14_+_24105572_24105585	0.0872436	SOX2.p2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg19_v1_chr6_-_90062349_90062437	0.087046	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr17_-_62658311_62658419	0.0867946	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr5_+_140480056_140480233	0.0867406	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg19_v1_chr1_-_120439117_120439146	0.086421	SOX2.p2	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30
hg19_v1_chr6_-_138189313_138189388	0.0863211	SOX2.p2	
hg19_v1_chr2_-_170218972_170218991	0.0862694	SOX2.p2	AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2	AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2
hg19_v1_chr19_-_11450254_11450347	0.0862603	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg19_v1_chr12_+_8666135_8666328	0.0861839	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg19_v1_chr16_-_77468930_77469010	0.0859168	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg19_v1_chr13_+_53602829_53602995	0.0857469	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	HQ258281|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg19_v1_chr11_+_22696318_22696354	0.085596	SOX2.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg19_v1_chr2_+_171571800_171571917	0.0855737	SOX2.p2	NM_001003845|SP5|389058|Sp5 transcription factor	AB096175|SP5|389058|Sp5 transcription factor
hg19_v1_chr15_+_45879758_45879788	0.0851833	SOX2.p2	AK128626|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr21_-_36231794_36231878	0.0851575	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr1_-_226497197_226497197	0.08501	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr4_-_70626429_70626429	0.0847696	SOX2.p2	BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1	NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1
hg19_v1_chr2_-_206950895_206950927	0.0847578	SOX2.p2	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg19_v1_chr6_+_42531767_42531787	0.084486	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr1_+_65730423_65730436	0.0844252	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chr1_-_173793268_173793326	0.0844121	SOX2.p2	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg19_v1_chr17_+_59489111_59489111	0.0843022	SOX2.p2	BC046200|C17orf82|388407|chromosome 17 open reading frame 82	NM_203425|C17orf82|388407|chromosome 17 open reading frame 82
hg19_v1_chr1_-_114695061_114695061	0.0842735	SOX2.p2	AK056448|SYT6|148281|synaptotagmin VI	NM_205848|SYT6|148281|synaptotagmin VI
hg19_v1_chr3_+_154797910_154797952	0.0842445	SOX2.p2	NM_007288|MME|4311|membrane metallo-endopeptidase
hg19_v1_chrX_+_119738542_119738583	0.0841638	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr15_+_51973549_51973713	0.0841462	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr2_+_99953749_99954017	0.0840906	SOX2.p2	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg19_v1_chr12_+_54348683_54348713	0.0840328	SOX2.p2	NM_173860|HOXC12|3228|homeobox C12
hg19_v1_chr2_+_241375030_241375131	0.0838324	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg19_v1_chrX_+_140677834_140677894	0.0837427	SOX2.p2	NM_145662|SPANXA2|728712|SPANX family, member A2	AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1
hg19_v1_chr15_+_40886442_40886486	0.0836771	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr19_+_3880617_3880653	0.0835677	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chrY_+_14813159_14813159	0.0834042	SOX2.p2	AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked	NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked
hg19_v1_chr9_+_15422862_15422874	0.0832753	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr6_+_118869441_118869490	0.0831792	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg19_v1_chr7_-_115670828_115670876	0.0830269	SOX2.p2	CR933605|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg19_v1_chr1_-_212588073_212588234	0.0830177	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg19_v1_chr17_+_42786188_42786287	0.082716	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr8_+_92082423_92082605	0.0825346	SOX2.p2	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg19_v1_chr2_+_3627725_3627765	0.082291	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg19_v1_chr3_+_10068139_10068182	0.0821962	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr7_-_151107117_151107125	0.0821249	SOX2.p2	NM_198285|WDR86|349136|WD repeat domain 86
hg19_v1_chr5_+_68800003_68800071	0.0820815	SOX2.p2	NM_001205255|OCLN|100506658|occludin	FJ786083|OCLN|100506658|occludin	FJ786084|OCLN|100506658|occludin	GQ225096|OCLN|100506658|occludin	GQ225097|OCLN|100506658|occludin	GQ225098|OCLN|100506658|occludin	GQ402517|OCLN|100506658|occludin	DQ892423|OCLN|100506658|occludin	DQ895637|OCLN|100506658|occludin	AB451306|OCLN|100506658|occludin	AB451437|OCLN|100506658|occludin
hg19_v1_chr6_-_94129059_94129307	0.0819687	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg19_v1_chr12_-_123706393_123706440	0.0818145	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg19_v1_chr13_+_26828755_26828778	0.0818112	SOX2.p2	BC069634|CDK8|1024|cyclin-dependent kinase 8	BC104492|CDK8|1024|cyclin-dependent kinase 8	BC105950|CDK8|1024|cyclin-dependent kinase 8	BC107601|CDK8|1024|cyclin-dependent kinase 8	NM_001260|CDK8|1024|cyclin-dependent kinase 8	X85753|CDK8|1024|cyclin-dependent kinase 8	AY702976|CDK8|1024|cyclin-dependent kinase 8
hg19_v1_chr5_-_150284503_150284544	0.0814987	SOX2.p2	AK096465|ZNF300|91975|zinc finger protein 300	NM_001172831|ZNF300|91975|zinc finger protein 300	NM_001172832|ZNF300|91975|zinc finger protein 300	NM_052860|ZNF300|91975|zinc finger protein 300
hg19_v1_chr21_+_27107671_27107726	0.0813049	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chrX_+_49326599_49326609	0.0812556	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr7_-_44887567_44887589	0.0812245	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg19_v1_chrX_+_91090459_91090503	0.0810218	SOX2.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr19_+_39899749_39899837	0.0809052	SOX2.p2	
hg19_v1_chr17_-_33521376_33521411	0.0808632	SOX2.p2	AK097473|SLC35G3|146861|solute carrier family 35, member G3	BC136422|SLC35G3|146861|solute carrier family 35, member G3	BC140700|SLC35G3|146861|solute carrier family 35, member G3	NM_152462|SLC35G3|146861|solute carrier family 35, member G3
hg19_v1_chrX_+_106143393_106143393	0.0808188	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg19_v1_chr3_-_139195300_139195357	0.0808011	SOX2.p2	BC069296|RBP2|5948|retinol binding protein 2, cellular	BC069361|RBP2|5948|retinol binding protein 2, cellular	BC069396|RBP2|5948|retinol binding protein 2, cellular	BC069424|RBP2|5948|retinol binding protein 2, cellular	BC069447|RBP2|5948|retinol binding protein 2, cellular	BC069469|RBP2|5948|retinol binding protein 2, cellular	BC069513|RBP2|5948|retinol binding protein 2, cellular	BC069522|RBP2|5948|retinol binding protein 2, cellular	U13831|RBP2|5948|retinol binding protein 2, cellular	NM_004164|RBP2|5948|retinol binding protein 2, cellular	AK291978|RBP2|5948|retinol binding protein 2, cellular
hg19_v1_chr14_+_93389444_93389444	0.0805704	SOX2.p2	NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)
hg19_v1_chr7_-_27192201_27192216	0.0805035	SOX2.p2	
hg19_v1_chr11_-_113577023_113577094	0.0803761	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg19_v1_chr21_+_18885104_18885223	0.080183	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr5_+_82767492_82767743	0.0801668	SOX2.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg19_v1_chr17_-_46703613_46703964	0.0801513	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg19_v1_chr12_+_5603297_5603380	0.0801505	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg19_v1_chr10_-_92681025_92681031	0.0796366	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr22_+_20105068_20105075	0.0796292	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr12_-_6716550_6716563	0.079539	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chrX_+_49217770_49217780	0.0794607	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894341|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr19_-_48389514_48389562	0.0790943	SOX2.p2	DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg19_v1_chr14_-_94984180_94984180	0.079037	SOX2.p2	BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
hg19_v1_chr7_-_129845216_129845337	0.0790237	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg19_v1_chrX_-_132092224_132092289	0.0789678	SOX2.p2	AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2
hg19_v1_chr7_+_56119439_56119461	0.0789524	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr19_-_51017765_51017965	0.078898	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg19_v1_chr6_-_108582167_108582221	0.0787041	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr11_+_46740769_46740804	0.0785694	SOX2.p2	BC051332|F2|2147|coagulation factor II (thrombin)	AK222775|F2|2147|coagulation factor II (thrombin)	AK222777|F2|2147|coagulation factor II (thrombin)	AK293326|F2|2147|coagulation factor II (thrombin)	EU832664|F2|2147|coagulation factor II (thrombin)	EU832742|F2|2147|coagulation factor II (thrombin)	V00595|F2|2147|coagulation factor II (thrombin)
hg19_v1_chr11_+_117103237_117103629	0.0785302	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg19_v1_chr1_-_114354906_114355097	0.0784717	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chr13_+_37248048_37248156	0.0784234	SOX2.p2	BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1	NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1	AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1
hg19_v1_chr4_-_100242487_100242571	0.0783698	SOX2.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v1_chr1_+_148558187_148558268	0.0781496	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg19_v1_chr16_-_67217403_67217479	0.0780111	SOX2.p2	AK094787|KIAA0895L|653319|KIAA0895-like	AK096855|KIAA0895L|653319|KIAA0895-like	BC080183|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr18_-_3874252_3874316	0.0779675	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chrX_+_119737905_119737982	0.0779195	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr19_-_57656569_57656569	0.0777941	SOX2.p2	AF365931|ZIM3|114026|zinc finger, imprinted 3	NM_052882|ZIM3|114026|zinc finger, imprinted 3
hg19_v1_chr2_+_203500211_203500263	0.0777286	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr16_+_70333058_70333095	0.0775917	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr5_+_180326076_180326273	0.0771852	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg19_v1_chr11_-_65326129_65326252	0.0770756	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr1_+_215256559_215256661	0.0769606	SOX2.p2	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr3_-_87325611_87325736	0.0768635	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg19_v1_chr19_-_38188344_38188406	0.0767934	SOX2.p2	BC005085|ZNF607|84775|zinc finger protein 607
hg19_v1_chr17_-_3030844_3030958	0.0767524	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg19_v1_chr20_+_32319765_32319827	0.0767106	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341	HQ258664|ZNF341|84905|zinc finger protein 341
hg19_v1_chr16_-_69788798_69788848	0.0766754	SOX2.p2	AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v1_chr6_-_88411948_88411949	0.0765392	SOX2.p2	AK222701|AKIRIN2|55122|akirin 2
hg19_v1_chr5_+_179921371_179921416	0.0763334	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr14_+_77292714_77292876	0.0759197	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg19_v1_chr3_+_12329332_12329581	0.0754524	SOX2.p2	NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma	NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma	X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma	AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg19_v1_chr7_-_23509631_23509728	0.0754489	SOX2.p2	
hg19_v1_chr1_-_32827843_32827843	0.0754236	SOX2.p2	NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071
hg19_v1_chr3_-_57583090_57583148	0.0753466	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr18_-_78005230_78005488	0.0751966	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg19_v1_chr15_+_91260575_91260654	0.0751529	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg19_v1_chrY_-_21154560_21154979	0.0750979	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr3_+_178866124_178866352	0.075063	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr15_+_52311408_52311431	0.0746011	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr11_+_7041699_7041699	0.0745097	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg19_v1_chr8_+_23101149_23101168	0.0740775	SOX2.p2	AK097202|CHMP7|91782|charged multivesicular body protein 7	NM_152272|CHMP7|91782|charged multivesicular body protein 7	BC042050|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr1_+_22303417_22303542	0.0740331	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg19_v1_chr22_+_20105145_20105170	0.0740217	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr4_-_103265818_103265919	0.0739523	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr10_+_5936348_5936348	0.0737457	SOX2.p2	AF380349|FBXO18|84893|F-box protein, helicase, 18	NM_032807|FBXO18|84893|F-box protein, helicase, 18
hg19_v1_chr1_+_145293232_145293370	0.0736234	SOX2.p2	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8	AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8	NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10
hg19_v1_chr9_-_14779530_14779530	0.0731473	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg19_v1_chr4_-_120549115_120549238	0.072908	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr1_-_155649597_155649619	0.0728645	SOX2.p2	AK303386|YY1AP1|55249|YY1 associated protein 1	NM_001198899|YY1AP1|55249|YY1 associated protein 1
hg19_v1_chr5_-_133747592_133747607	0.0727949	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg19_v1_chr8_-_67090690_67090845	0.072775	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr7_-_94953827_94953883	0.0726784	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg19_v1_chr6_+_56954889_56954924	0.0725755	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg19_v1_chr22_+_21821458_21821458	0.0725566	SOX2.p2	NM_001207052|TMEM191C|645426|transmembrane protein 191C
hg19_v1_chr20_-_39766522_39766695	0.0725389	SOX2.p2	
hg19_v1_chr19_-_42569921_42569956	0.0725172	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr3_-_160167600_160167647	0.072419	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg19_v1_chr1_+_111413820_111413838	0.072408	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg19_v1_chr16_+_58498216_58498308	0.0723552	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr16_+_1128780_1128868	0.0722336	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg19_v1_chr19_-_49250023_49250167	0.0721985	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg19_v1_chr10_-_92680784_92680848	0.0721002	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr12_-_121248679_121248688	0.0720368	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase-like 3
hg19_v1_chr10_+_103825123_103825162	0.0719987	SOX2.p2	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg19_v1_chrX_-_130423034_130423034	0.0719501	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr1_-_100643770_100643800	0.0716587	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg19_v1_chr1_+_153190059_153190059	0.0715316	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg19_v1_chrX_+_89176939_89177084	0.0713564	SOX2.p2	BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked
hg19_v1_chr2_-_203776948_203776948	0.0711564	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chr17_-_79828691_79828789	0.0711136	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr19_-_14629160_14629226	0.0711073	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr12_-_16758312_16758338	0.0709065	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr14_+_37667148_37667292	0.070849	SOX2.p2	BC035870|MIPOL1|145282|mirror-image polydactyly 1	BX537396|MIPOL1|145282|mirror-image polydactyly 1	AK291850|MIPOL1|145282|mirror-image polydactyly 1	BC036523|MIPOL1|145282|mirror-image polydactyly 1	BC036124|MIPOL1|145282|mirror-image polydactyly 1	BX647795|MIPOL1|145282|mirror-image polydactyly 1	AY059470|MIPOL1|145282|mirror-image polydactyly 1
hg19_v1_chr13_-_111567335_111567395	0.0705925	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10
hg19_v1_chr11_-_116658701_116658729	0.070374	SOX2.p2	AK301227|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg19_v1_chr14_+_21214098_21214127	0.0702378	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg19_v1_chr15_+_41136178_41136522	0.0700537	SOX2.p2	AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr17_-_17480325_17480354	0.0700482	SOX2.p2	CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr12_-_72057676_72057748	0.0698923	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr14_-_73925279_73925303	0.069795	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr2_+_216986817_216986917	0.0697572	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr13_+_22245083_22245214	0.0697173	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg19_v1_chr1_+_33004969_33005120	0.069634	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr19_-_48547180_48547310	0.0695143	SOX2.p2	HQ258076|CABP5|56344|calcium binding protein 5	BC126133|CABP5|56344|calcium binding protein 5	BC126135|CABP5|56344|calcium binding protein 5	AF169159|CABP5|56344|calcium binding protein 5	NM_019855|CABP5|56344|calcium binding protein 5
hg19_v1_chr17_+_79213104_79213165	0.0694739	SOX2.p2	BC127837|C17orf89|284184|chromosome 17 open reading frame 89	NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89	BC079831|C17orf89|284184|chromosome 17 open reading frame 89
hg19_v1_chr17_-_46655544_46655742	0.0690959	SOX2.p2	AL137449|HOXB4|3214|homeobox B4	BC049204|HOXB4|3214|homeobox B4	NM_024015|HOXB4|3214|homeobox B4
hg19_v1_chr17_-_56494930_56494959	0.0689472	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg19_v1_chr5_+_133861685_133861926	0.0688592	SOX2.p2	D87076|PHF15|23338|PHD finger protein 15	NM_015288|PHF15|23338|PHD finger protein 15	AK290471|PHF15|23338|PHD finger protein 15
hg19_v1_chr12_-_50790391_50790404	0.0688457	SOX2.p2	BC054024|FAM186A|121006|family with sequence similarity 186, member A	AL833333|FAM186A|121006|family with sequence similarity 186, member A	NM_001145475|FAM186A|121006|family with sequence similarity 186, member A
hg19_v1_chr8_+_23104120_23104150	0.0687628	SOX2.p2	AK315664|CHMP7|91782|charged multivesicular body protein 7	AK021776|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr10_+_97515408_97515672	0.0685276	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr8_+_85095501_85095585	0.0682022	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr19_+_13250072_13250163	0.0681738	SOX2.p2	AK123056|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg19_v1_chr7_+_129984629_129984700	0.0681096	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg19_v1_chr2_+_169312755_169312764	0.0678846	SOX2.p2	AK172775|CERS6|253782|ceramide synthase 6
hg19_v1_chr5_-_157079371_157079427	0.0677124	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg19_v1_chr10_-_50396380_50396473	0.0676437	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg19_v1_chr4_+_2819888_2819939	0.06762	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr1_-_200379072_200379162	0.0676158	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr17_-_74099603_74099845	0.0675755	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg19_v1_chr19_-_51568323_51568367	0.0673441	SOX2.p2	AB108823|KLK13|26085|kallikrein-related peptidase 13	AB108824|KLK13|26085|kallikrein-related peptidase 13	AB451465|KLK13|26085|kallikrein-related peptidase 13	AY923171|KLK13|26085|kallikrein-related peptidase 13	AY923172|KLK13|26085|kallikrein-related peptidase 13	AY923173|KLK13|26085|kallikrein-related peptidase 13	BC069334|KLK13|26085|kallikrein-related peptidase 13	BC069543|KLK13|26085|kallikrein-related peptidase 13	NM_015596|KLK13|26085|kallikrein-related peptidase 13	AL050220|KLK13|26085|kallikrein-related peptidase 13
hg19_v1_chr2_+_219082119_219082193	0.0673276	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr9_+_137772653_137772667	0.0671588	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg19_v1_chr3_+_150264514_150264575	0.0671415	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr18_+_43194765_43194765	0.0671218	SOX2.p2	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2
hg19_v1_chr4_+_8951476_8951476	0.0670016	SOX2.p2	NM_001040071|LOC650293|650293|seven transmembrane helix receptor
hg19_v1_chr16_-_67217825_67217899	0.0669933	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr19_-_51893791_51893860	0.0669212	SOX2.p2	BC085012|LOC147646|147646|uncharacterized LOC147646	BC043532|LOC147646|147646|uncharacterized LOC147646	NM_001193623|LOC147646|147646|uncharacterized LOC147646
hg19_v1_chr22_+_44577256_44577256	0.0668798	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg19_v1_chr5_+_180415844_180415958	0.0667013	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg19_v1_chr3_+_10068097_10068121	0.0664122	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr9_-_104198045_104198104	0.0663968	SOX2.p2	X01098|ALDOB|229|aldolase B, fructose-bisphosphate	AK026411|ALDOB|229|aldolase B, fructose-bisphosphate	AK290795|ALDOB|229|aldolase B, fructose-bisphosphate	BC029399|ALDOB|229|aldolase B, fructose-bisphosphate	NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate	X02747|ALDOB|229|aldolase B, fructose-bisphosphate
hg19_v1_chr11_+_112832201_112832212	0.0663053	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr12_+_105380113_105380129	0.066206	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg19_v1_chr15_+_48010685_48010685	0.0661498	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v1_chr17_-_37557851_37557949	0.0660927	SOX2.p2	BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20	DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20
hg19_v1_chr12_+_48722762_48722814	0.0659673	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg19_v1_chr4_-_89080010_89080065	0.065882	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr13_+_111767586_111767873	0.0658801	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr15_+_41625152_41625179	0.0658311	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg19_v1_chrX_-_15872882_15872891	0.0658049	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr1_+_155108276_155108342	0.0656672	SOX2.p2	AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg19_v1_chr8_-_33457435_33457484	0.0655995	SOX2.p2	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr17_-_72527592_72527612	0.0655824	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg19_v1_chrX_-_115085421_115085457	0.0653733	SOX2.p2	BC003645|LOC642776|642776|uncharacterized LOC642776
hg19_v1_chr15_+_42566365_42566677	0.0652272	SOX2.p2	NM_198141|GANC|2595|glucosidase, alpha; neutral C	AK301467|GANC|2595|glucosidase, alpha; neutral C	AK074037|GANC|2595|glucosidase, alpha; neutral C	BC059406|GANC|2595|glucosidase, alpha; neutral C	BC093833|GANC|2595|glucosidase, alpha; neutral C	BC112051|GANC|2595|glucosidase, alpha; neutral C	AF545045|GANC|2595|glucosidase, alpha; neutral C	AF545046|GANC|2595|glucosidase, alpha; neutral C	AM392591|GANC|2595|glucosidase, alpha; neutral C	AM393467|GANC|2595|glucosidase, alpha; neutral C	BC151223|GANC|2595|glucosidase, alpha; neutral C
hg19_v1_chr7_+_44836166_44836268	0.0651095	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr5_-_133747520_133747589	0.0647397	SOX2.p2	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg19_v1_chr17_+_26794838_26794968	0.064362	SOX2.p2	
hg19_v1_chr10_+_60094712_60094961	0.0640913	SOX2.p2	NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1
hg19_v1_chr1_-_31538762_31538804	0.0639332	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr2_-_100721792_100722044	0.063929	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr1_-_228604305_228604457	0.0637193	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr10_+_134210691_134210727	0.0634526	SOX2.p2	NM_001098637|PWWP2B|170394|PWWP domain containing 2B	NM_138499|PWWP2B|170394|PWWP domain containing 2B	BC068574|PWWP2B|170394|PWWP domain containing 2B
hg19_v1_chr15_+_23810808_23810928	0.0634323	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr7_-_45151272_45151295	0.0633096	SOX2.p2	BC017235|TBRG4|9238|transforming growth factor beta regulator 4	BC014918|TBRG4|9238|transforming growth factor beta regulator 4	AK022575|TBRG4|9238|transforming growth factor beta regulator 4	AK222943|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chrX_+_122318095_122318386	0.0629771	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg19_v1_chr12_+_56137063_56137182	0.0629117	SOX2.p2	NM_005811|GDF11|10220|growth differentiation factor 11	AF100907|GDF11|10220|growth differentiation factor 11	AF028333|GDF11|10220|growth differentiation factor 11
hg19_v1_chr1_-_176176364_176176374	0.0627999	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr11_-_82782870_82782877	0.0627295	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr18_+_72201799_72201902	0.0626988	SOX2.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	HQ258259|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v1_chr19_-_39523132_39523334	0.0626663	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27
hg19_v1_chr2_-_80530943_80530984	0.0624747	SOX2.p2	AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg19_v1_chr5_+_145317297_145317439	0.0622064	SOX2.p2	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2
hg19_v1_chr12_-_55028624_55028678	0.0621607	SOX2.p2	AF238867|LACRT|90070|lacritin	BC069317|LACRT|90070|lacritin	NM_033277|LACRT|90070|lacritin	BC062217|LACRT|90070|lacritin
hg19_v1_chr21_+_17102370_17102712	0.0620209	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr3_-_178969644_178969644	0.0620128	SOX2.p2	NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr3_+_150264576_150264596	0.0618022	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chrX_-_15332680_15332680	0.0613833	SOX2.p2	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr10_+_105726935_105726994	0.0612673	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg19_v1_chr1_+_193028583_193028593	0.0612056	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg19_v1_chr7_-_94953734_94953815	0.0611006	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg19_v1_chr22_+_44422183_44422183	0.060905	SOX2.p2	AK308443|PARVB|29780|parvin, beta	NM_001243386|PARVB|29780|parvin, beta
hg19_v1_chr11_-_116658738_116658738	0.0608891	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr17_-_8055684_8055757	0.0607886	SOX2.p2	AB088477|PER1|5187|period homolog 1 (Drosophila)	AF022991|PER1|5187|period homolog 1 (Drosophila)	AK291061|PER1|5187|period homolog 1 (Drosophila)	NM_002616|PER1|5187|period homolog 1 (Drosophila)
hg19_v1_chr1_+_110543548_110543548	0.0607323	SOX2.p2	NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr11_-_10829519_10829630	0.0607009	SOX2.p2	BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr15_+_58724174_58724231	0.060689	SOX2.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic	HQ258274|LIPC|3990|lipase, hepatic
hg19_v1_chr12_-_40013842_40013842	0.0605915	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg19_v1_chr6_-_108582124_108582163	0.0605782	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chr10_+_111967302_111967416	0.0605186	SOX2.p2	BC035128|MXI1|4601|MAX interactor 1	NM_130439|MXI1|4601|MAX interactor 1
hg19_v1_chr1_+_28844647_28844759	0.0602542	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr12_-_24102563_24102641	0.0601203	SOX2.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr6_-_44280986_44281067	0.0599745	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr20_-_45985411_45985566	0.0599085	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr4_-_120550142_120550183	0.0598255	SOX2.p2	
hg19_v1_chr20_-_58507172_58507208	0.0597474	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg19_v1_chr2_+_177016112_177016314	0.0596592	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr14_+_74815165_74815174	0.0594742	SOX2.p2	NM_018228|VRTN|55237|vertebrae development homolog (pig)
hg19_v1_chr17_-_41910439_41910814	0.0591931	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg19_v1_chr22_+_45680827_45680894	0.0591839	SOX2.p2	AF085808|UPK3A|7380|uroplakin 3A	BC069544|UPK3A|7380|uroplakin 3A	NM_001167574|UPK3A|7380|uroplakin 3A	NM_006953|UPK3A|7380|uroplakin 3A	BC108900|UPK3A|7380|uroplakin 3A	CR456608|UPK3A|7380|uroplakin 3A	AB010637|UPK3A|7380|uroplakin 3A	CU013204|UPK3A|7380|uroplakin 3A	CU013492|UPK3A|7380|uroplakin 3A
hg19_v1_chr14_-_107013474_107013478	0.0591639	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr21_+_33664123_33664123	0.0591427	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg19_v1_chr6_-_33756905_33756916	0.0590715	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg19_v1_chr8_-_145050896_145050958	0.0590453	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg19_v1_chr1_-_1167358_1167371	0.0590191	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr1_+_87170222_87170280	0.0589869	SOX2.p2	NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr4_+_184580483_184580539	0.0589282	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr1_-_115300615_115300670	0.0587557	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr19_+_52298410_52298415	0.0587105	SOX2.p2	AK123030|FPR3|2359|formyl peptide receptor 3	AK292541|FPR3|2359|formyl peptide receptor 3	NM_002030|FPR3|2359|formyl peptide receptor 3	BC059388|FPR3|2359|formyl peptide receptor 3
hg19_v1_chr5_+_178368193_178368237	0.0587031	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg19_v1_chr1_-_161102367_161102382	0.0586916	SOX2.p2	BC016724|DEDD|9191|death effector domain containing	AK296629|DEDD|9191|death effector domain containing	AK001497|DEDD|9191|death effector domain containing
hg19_v1_chr4_-_145061787_145061903	0.0583933	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg19_v1_chr14_-_27066959_27067018	0.058373	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr11_-_129817300_129817516	0.0583446	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg19_v1_chr16_+_31191430_31191457	0.0579958	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma
hg19_v1_chr11_-_85780899_85780922	0.0579448	SOX2.p2	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg19_v1_chr3_+_97887543_97887543	0.0577456	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg19_v1_chr11_+_126173646_126173646	0.057624	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr1_+_167064086_167064086	0.0575361	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg19_v1_chr2_+_48757063_48757180	0.0572868	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg19_v1_chr20_+_30795699_30795763	0.057281	SOX2.p2	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr19_-_46148606_46148841	0.0572266	SOX2.p2	AK296258|EML2|24139|echinoderm microtubule associated protein like 2	AK294668|EML2|24139|echinoderm microtubule associated protein like 2	NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2	BC029304|EML2|24139|echinoderm microtubule associated protein like 2
hg19_v1_chr11_+_114271294_114271368	0.0571111	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr1_+_1846265_1846265	0.0570461	SOX2.p2	AF490905|CALML6|163688|calmodulin-like 6	AY566229|CALML6|163688|calmodulin-like 6	NM_138705|CALML6|163688|calmodulin-like 6
hg19_v1_chr2_+_44502596_44502674	0.0569571	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg19_v1_chr5_-_74062885_74063041	0.0568459	SOX2.p2	AK307839|GFM2|84340|G elongation factor, mitochondrial 2	BC015712|GFM2|84340|G elongation factor, mitochondrial 2	AY453587|GFM2|84340|G elongation factor, mitochondrial 2	BC030612|GFM2|84340|G elongation factor, mitochondrial 2	AK308422|GFM2|84340|G elongation factor, mitochondrial 2	AF111808|GFM2|84340|G elongation factor, mitochondrial 2	AK025314|GFM2|84340|G elongation factor, mitochondrial 2	AK315705|GFM2|84340|G elongation factor, mitochondrial 2	AF367997|GFM2|84340|G elongation factor, mitochondrial 2	NM_032380|GFM2|84340|G elongation factor, mitochondrial 2	NM_170681|GFM2|84340|G elongation factor, mitochondrial 2	NM_170691|GFM2|84340|G elongation factor, mitochondrial 2
hg19_v1_chr7_-_37393271_37393271	0.0567589	SOX2.p2	AK291784|ELMO1|9844|engulfment and cell motility 1	NM_001206482|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr3_-_129158779_129158816	0.0567398	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr18_+_23713815_23713882	0.0564745	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg19_v1_chr17_-_40169400_40169446	0.056449	SOX2.p2	AB209834|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ893064|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ896317|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK291047|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC003601|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	U46571|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AM393511|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC011837|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK296602|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK316081|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr17_+_74261280_74261289	0.0563899	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr4_-_144826659_144826715	0.0563725	SOX2.p2	EU176664|GYPE|2996|glycophorin E (MNS blood group)	BC064396|GYPE|2996|glycophorin E (MNS blood group)	BC017864|GYPE|2996|glycophorin E (MNS blood group)	M29610|GYPE|2996|glycophorin E (MNS blood group)	NM_002102|GYPE|2996|glycophorin E (MNS blood group)	NM_198682|GYPE|2996|glycophorin E (MNS blood group)
hg19_v1_chr5_+_140529619_140529838	0.0558957	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr2_+_191014971_191014971	0.0558662	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg19_v1_chr3_-_13057130_13057306	0.0556969	SOX2.p2	
hg19_v1_chr1_-_52344010_52344058	0.0556439	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr21_-_42218587_42218650	0.0555832	SOX2.p2	AB209136|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr14_+_20923341_20923355	0.0554395	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr1_-_176176283_176176354	0.0553795	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr19_-_12780448_12780464	0.05499	SOX2.p2	AF078861|WDR83OS|51398|WD repeat domain 83 opposite strand	AF151898|WDR83OS|51398|WD repeat domain 83 opposite strand	NM_016145|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr12_-_48152860_48152888	0.0549343	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr2_-_103353300_103353367	0.0548987	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg19_v1_chr2_+_119699744_119699897	0.0548859	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure
hg19_v1_chr6_-_28304151_28304151	0.0544181	SOX2.p2	NM_001243241|ZNF323|64288|zinc finger protein 323	NM_001243242|ZNF323|64288|zinc finger protein 323	NM_001243244|ZNF323|64288|zinc finger protein 323	NM_030899|ZNF323|64288|zinc finger protein 323
hg19_v1_chr21_-_42219038_42219064	0.0543888	SOX2.p2	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule	NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule	AF217525|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr3_-_183602658_183602667	0.0543636	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr5_+_52284903_52285337	0.0542388	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr20_+_30697512_30697570	0.0542132	SOX2.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chrX_+_48242967_48242967	0.0542082	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg19_v1_chr2_+_96068423_96068535	0.054082	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg19_v1_chr10_+_70748476_70748594	0.0540366	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr14_-_54955714_54955796	0.0539494	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr10_+_114043413_114043492	0.0538578	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	HQ258194|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg19_v1_chr17_+_40925473_40925496	0.0537768	SOX2.p2	AB014763|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)
hg19_v1_chr5_-_11904127_11904242	0.0537715	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr10_-_33247178_33247297	0.0537309	SOX2.p2	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr17_-_26926044_26926071	0.0536817	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr13_+_100633977_100634063	0.0536536	SOX2.p2	NM_007129|ZIC2|7546|Zic family member 2
hg19_v1_chr8_+_12803150_12803182	0.0536355	SOX2.p2	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg19_v1_chr1_+_185703470_185703682	0.0536136	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg19_v1_chr14_-_24020766_24020874	0.0535947	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg19_v1_chr2_+_173292344_173292614	0.0535625	SOX2.p2	X53586|ITGA6|3655|integrin, alpha 6	BC136455|ITGA6|3655|integrin, alpha 6	BC136456|ITGA6|3655|integrin, alpha 6	X59512|ITGA6|3655|integrin, alpha 6	AB208842|ITGA6|3655|integrin, alpha 6
hg19_v1_chr3_-_10547267_10547271	0.0535523	SOX2.p2	AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr5_-_43313581_43313612	0.0534675	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr19_+_1026627_1026697	0.053138	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg19_v1_chr4_-_83294806_83294938	0.053009	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr1_+_43148359_43148810	0.0524984	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg19_v1_chr16_+_68279206_68279295	0.0524163	SOX2.p2	AK300596|PLA2G15|23659|phospholipase A2, group XV	AK074828|PLA2G15|23659|phospholipase A2, group XV	NM_012320|PLA2G15|23659|phospholipase A2, group XV	AK296263|PLA2G15|23659|phospholipase A2, group XV	AK298494|PLA2G15|23659|phospholipase A2, group XV	AL110209|PLA2G15|23659|phospholipase A2, group XV	BC062605|PLA2G15|23659|phospholipase A2, group XV	AK001705|PLA2G15|23659|phospholipase A2, group XV	AK222790|PLA2G15|23659|phospholipase A2, group XV
hg19_v1_chr11_-_104769396_104769396	0.0524008	SOX2.p2	AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)	NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)
hg19_v1_chr9_+_133971862_133971894	0.0523296	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg19_v1_chr15_-_42840992_42841017	0.0521159	SOX2.p2	AK094891|LRRC57|255252|leucine rich repeat containing 57	NM_153260|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chr5_-_149466173_149466293	0.0517258	SOX2.p2	BC047521|CSF1R|1436|colony stimulating factor 1 receptor	AK304491|CSF1R|1436|colony stimulating factor 1 receptor	M25786|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr2_-_86422591_86422720	0.0517137	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chrX_+_119737984_119738091	0.051704	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr1_+_19971865_19971865	0.0516627	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr3_-_129158675_129158761	0.0516524	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr17_+_75369372_75369479	0.0516274	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg19_v1_chr1_+_163038934_163039274	0.0515112	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr4_-_186456580_186456711	0.051451	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg19_v1_chr7_-_130353579_130353611	0.051193	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg19_v1_chr4_-_113558120_113558150	0.0510492	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr10_-_22498911_22498911	0.0509163	SOX2.p2	NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1
hg19_v1_chr16_-_19533285_19533468	0.0508965	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg19_v1_chr1_+_2036154_2036154	0.0507761	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr1_-_33502452_33502463	0.0505943	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2
hg19_v1_chr1_-_212588235_212588236	0.0505335	SOX2.p2	AK001736|TMEM206|55248|transmembrane protein 206
hg19_v1_chr3_-_150690785_150690785	0.0505279	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg19_v1_chr3_-_71592707_71592707	0.0504826	SOX2.p2	AF250920|FOXP1|27086|forkhead box P1	NM_001244816|FOXP1|27086|forkhead box P1
hg19_v1_chr3_-_48700317_48700354	0.0504698	SOX2.p2	AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)	NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
hg19_v1_chr12_-_56679729_56679874	0.0503017	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr11_-_104034685_104034903	0.0502563	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg19_v1_chr2_+_183580960_183581189	0.050219	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr11_-_17498419_17498454	0.0501725	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr17_+_75369236_75369271	0.0500136	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg19_v1_chr6_-_2842069_2842096	0.0499923	SOX2.p2	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg19_v1_chr2_-_64371444_64371604	0.0499367	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg19_v1_chr1_+_25071906_25071960	0.049936	SOX2.p2	AK315051|CLIC4|25932|chloride intracellular channel 4	AK301466|CLIC4|25932|chloride intracellular channel 4	AK307142|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr3_-_183602668_183602689	0.0498363	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr8_+_85095452_85095466	0.0498182	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr18_+_43304091_43304117	0.0497546	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v1_chr8_+_61429494_61429494	0.0497413	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr17_-_46667596_46667630	0.0496251	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg19_v1_chr17_+_73008744_73008810	0.0495345	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg19_v1_chr7_-_100061893_100061893	0.0494996	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg19_v1_chr1_-_200377262_200377276	0.0494825	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg19_v1_chr6_+_25279765_25280023	0.0494745	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr11_+_62475165_62475184	0.0494413	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg19_v1_chr11_-_71791434_71791599	0.0494094	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr1_-_247494990_247495044	0.0493696	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg19_v1_chr5_+_157158322_157158534	0.0492119	SOX2.p2	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
hg19_v1_chr9_+_6413139_6413150	0.0491766	SOX2.p2	BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg19_v1_chr12_-_114841702_114841706	0.0490001	SOX2.p2	NM_080718|TBX5|6910|T-box 5	U80987|TBX5|6910|T-box 5	U89353|TBX5|6910|T-box 5	EU446658|TBX5|6910|T-box 5
hg19_v1_chr1_-_8003224_8003224	0.0488106	SOX2.p2	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg19_v1_chr19_+_41903723_41903741	0.0485836	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr4_+_141178439_141178439	0.048552	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg19_v1_chr16_-_1832576_1832608	0.0483486	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr3_+_126423037_126423118	0.048143	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg19_v1_chr7_+_69064580_69064596	0.0480959	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg19_v1_chr7_+_96635289_96635289	0.0480621	SOX2.p2	NM_005222|DLX6|1750|distal-less homeobox 6
hg19_v1_chr1_+_36273786_36273855	0.0475613	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg19_v1_chr1_+_223566714_223566817	0.0474248	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg19_v1_chr1_-_176176376_176176377	0.047413	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr5_-_149466094_149466108	0.0474124	SOX2.p2	BC129939|CSF1R|1436|colony stimulating factor 1 receptor	BX648599|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr1_+_242012032_242012139	0.0472277	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr1_-_173837122_173837133	0.0471834	SOX2.p2	AL110141|GAS5|60674|growth arrest-specific 5 (non-protein coding)	BC038733|GAS5|60674|growth arrest-specific 5 (non-protein coding)
hg19_v1_chr12_-_11175169_11175218	0.0471687	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg19_v1_chr1_+_212797788_212797815	0.0470882	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg19_v1_chr2_-_70314065_70314161	0.0470395	SOX2.p2	BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)
hg19_v1_chr1_-_247171302_247171323	0.0469455	SOX2.p2	BC023527|ZNF695|57116|zinc finger protein 695
hg19_v1_chr2_-_45838383_45838432	0.0469269	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg19_v1_chrX_+_73641084_73641409	0.0469175	SOX2.p2	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
hg19_v1_chr8_-_38205652_38205732	0.0469121	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v1_chr13_-_27334777_27334929	0.046861	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg19_v1_chr5_+_34656367_34656459	0.0468183	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr2_+_1418179_1418180	0.0467967	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg19_v1_chr11_-_77348758_77348871	0.0466761	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg19_v1_chr3_-_46904879_46904972	0.0466511	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg19_v1_chr16_-_48644087_48644145	0.0465166	SOX2.p2	BC051897|N4BP1|9683|NEDD4 binding protein 1	AB014515|N4BP1|9683|NEDD4 binding protein 1	BC152472|N4BP1|9683|NEDD4 binding protein 1	NM_153029|N4BP1|9683|NEDD4 binding protein 1
hg19_v1_chrX_-_154842492_154842621	0.0462361	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg19_v1_chr17_+_30677138_30677175	0.0461788	SOX2.p2	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg19_v1_chr5_+_65372744_65372866	0.046171	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr19_-_21950322_21950429	0.046157	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg19_v1_chr18_-_21891469_21891469	0.0461469	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr22_+_50312333_50312417	0.0461431	SOX2.p2	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2	AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2	BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2	AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chrX_-_142722869_142723018	0.0460898	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg19_v1_chr13_-_52733669_52733784	0.0460501	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr22_+_20105095_20105118	0.0460124	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chr2_+_231921562_231921592	0.0459363	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chrX_-_40036581_40036581	0.045901	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg19_v1_chrX_+_150863729_150863729	0.0457691	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg19_v1_chr2_-_86422892_86422892	0.0456764	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr1_-_52344377_52344400	0.0456328	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr19_+_7702020_7702035	0.0455972	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr1_+_25071967_25072044	0.0454808	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr22_-_20104428_20104538	0.0454508	SOX2.p2	BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr7_+_123295860_123296015	0.0454479	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg19_v1_chr1_-_11907741_11907842	0.0454318	SOX2.p2	DQ893115|NPPA|4878|natriuretic peptide A	DQ896389|NPPA|4878|natriuretic peptide A	EU176780|NPPA|4878|natriuretic peptide A	M30262|NPPA|4878|natriuretic peptide A	BC005893|NPPA|4878|natriuretic peptide A	NM_006172|NPPA|4878|natriuretic peptide A
hg19_v1_chr17_-_3571819_3571878	0.0452673	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr11_+_71709951_71710108	0.0452276	SOX2.p2	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	NM_173044|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_005699|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg19_v1_chr13_+_31774122_31774298	0.0450794	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr5_+_132009372_132009372	0.0450378	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg19_v1_chr3_+_48956244_48956268	0.0449809	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr16_-_2836605_2836841	0.0449738	SOX2.p2	AF536382|PRSS33|260429|protease, serine, 33	BC062334|PRSS33|260429|protease, serine, 33	NM_152891|PRSS33|260429|protease, serine, 33
hg19_v1_chr1_-_78444690_78444763	0.0449657	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr22_+_20105076_20105093	0.0449509	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr17_-_26926015_26926038	0.0448851	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr17_-_36831156_36831214	0.0447966	SOX2.p2	NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96
hg19_v1_chr21_-_34883620_34883747	0.0447129	SOX2.p2	M32082|GART|2618|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
hg19_v1_chr9_+_125376947_125377016	0.0447124	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg19_v1_chr5_-_49737216_49737271	0.0446184	SOX2.p2	NM_198449|EMB|133418|embigin
hg19_v1_chr12_+_103981050_103981072	0.0445765	SOX2.p2	AY311388|STAB2|55576|stabilin 2	AJ295695|STAB2|55576|stabilin 2	NM_017564|STAB2|55576|stabilin 2	AB052958|STAB2|55576|stabilin 2
hg19_v1_chr15_-_80216004_80216072	0.0444762	SOX2.p2	AF249277|ST20|400410|suppressor of tumorigenicity 20
hg19_v1_chr3_-_186262114_186262166	0.0443257	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg19_v1_chr16_+_81069316_81069710	0.0442561	SOX2.p2	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg19_v1_chr18_-_30352841_30352973	0.0441914	SOX2.p2	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)	AB037805|KLHL14|57565|kelch-like 14 (Drosophila)	NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)
hg19_v1_chr9_+_6413321_6413490	0.0441273	SOX2.p2	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg19_v1_chr12_-_57472573_57472581	0.0440777	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg19_v1_chr2_+_101869327_101869347	0.0438983	SOX2.p2	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr17_+_79651072_79651096	0.0438503	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr3_+_75713480_75713486	0.0437822	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg19_v1_chr8_+_133787611_133787673	0.0437711	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr17_+_79651035_79651041	0.0435321	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr11_-_790103_790125	0.0433894	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr18_-_22930826_22931470	0.0433502	SOX2.p2	
hg19_v1_chr7_+_56119466_56119566	0.0433489	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr1_-_145610869_145610904	0.0432524	SOX2.p2	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr7_-_27159213_27159213	0.0430297	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg19_v1_chr19_-_48389571_48389653	0.0430086	SOX2.p2	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg19_v1_chr8_-_93107442_93107489	0.0430067	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr17_+_79650961_79651022	0.0430048	SOX2.p2	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr3_-_10547221_10547245	0.0429604	SOX2.p2	M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr1_+_215178884_215178884	0.0429446	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr9_+_35538890_35538938	0.042551	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr2_+_85132999_85133125	0.0425384	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10
hg19_v1_chr9_+_97521930_97522065	0.0425122	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr16_-_79634610_79634621	0.0423989	SOX2.p2	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
hg19_v1_chr12_-_6716475_6716528	0.0423792	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chrX_-_71792610_71792718	0.0423164	SOX2.p2	EU446822|HDAC8|55869|histone deacetylase 8	EU832800|HDAC8|55869|histone deacetylase 8	GQ129378|HDAC8|55869|histone deacetylase 8	AF245664|HDAC8|55869|histone deacetylase 8	AY429539|HDAC8|55869|histone deacetylase 8	BC050433|HDAC8|55869|histone deacetylase 8	AK300895|HDAC8|55869|histone deacetylase 8	AJ277724|HDAC8|55869|histone deacetylase 8	AK294903|HDAC8|55869|histone deacetylase 8	AF212246|HDAC8|55869|histone deacetylase 8	AK298767|HDAC8|55869|histone deacetylase 8
hg19_v1_chr2_-_87303105_87303560	0.0422172	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg19_v1_chr2_-_132121730_132121730	0.042214	SOX2.p2	NM_001077637|WTH3DI|150786|RAB6C-like
hg19_v1_chr11_-_65625737_65625803	0.0421921	SOX2.p2	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg19_v1_chr2_-_161130151_161130228	0.0418819	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg19_v1_chr18_-_29264394_29264685	0.0417884	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr3_+_115342302_115342536	0.0417277	SOX2.p2	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg19_v1_chr3_+_115342150_115342150	0.041612	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43
hg19_v1_chr9_+_135906373_135906403	0.0415417	SOX2.p2	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v1_chr19_+_35531409_35531409	0.0414616	SOX2.p2	M18930|HPN|3249|hepsin	NM_002151|HPN|3249|hepsin	NM_182983|HPN|3249|hepsin	X07732|HPN|3249|hepsin
hg19_v1_chr14_+_39583426_39583509	0.0412927	SOX2.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr2_+_220492286_220492423	0.0412795	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr5_-_180242540_180242545	0.0410979	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v1_chr12_+_18891040_18891201	0.0410547	SOX2.p2	BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3
hg19_v1_chr3_-_109035239_109035363	0.0410334	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg19_v1_chr1_+_76540374_76540550	0.0408253	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v1_chr5_+_95997723_95997779	0.0407524	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg19_v1_chr8_+_98656428_98656491	0.0407047	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg19_v1_chr17_-_79478236_79478585	0.0406715	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chr5_-_150284390_150284406	0.0406672	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg19_v1_chr8_+_145086444_145086606	0.0405392	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg19_v1_chr4_+_88343702_88344056	0.0403894	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr4_-_39979159_39979517	0.0403203	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr19_+_41903693_41903716	0.0402961	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr8_-_72756384_72756494	0.0402792	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg19_v1_chr4_+_71859391_71859552	0.0401826	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	JF806429|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg19_v1_chr15_-_77154284_77154284	0.0401008	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg19_v1_chrX_-_43832920_43832920	0.0400284	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr6_-_84140854_84140954	0.0399929	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr2_+_3705785_3705809	0.0399869	SOX2.p2	AK302299|ALLC|55821|allantoicase	NM_018436|ALLC|55821|allantoicase	BC029652|ALLC|55821|allantoicase
hg19_v1_chr2_-_136594749_136594749	0.0398133	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr16_-_18573334_18573449	0.0397506	SOX2.p2	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg19_v1_chr2_+_170590454_170590521	0.0397484	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr6_-_53213586_53213693	0.0397446	SOX2.p2	AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr2_-_75937993_75938110	0.0397266	SOX2.p2	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2	BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2	AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2
hg19_v1_chr18_-_60986508_60986612	0.039714	SOX2.p2	BC027258|BCL2|596|B-cell CLL/lymphoma 2	NM_000633|BCL2|596|B-cell CLL/lymphoma 2	NM_000657|BCL2|596|B-cell CLL/lymphoma 2
hg19_v1_chr20_-_3388219_3388285	0.0396398	SOX2.p2	NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194
hg19_v1_chr11_-_64889581_64889671	0.0394889	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg19_v1_chrX_-_110655384_110655459	0.0394502	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr11_+_109292837_109292850	0.0393495	SOX2.p2	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg19_v1_chr11_+_18720342_18720355	0.0392903	SOX2.p2	BC035692|TMEM86A|144110|transmembrane protein 86A	NM_153347|TMEM86A|144110|transmembrane protein 86A
hg19_v1_chr7_-_50132789_50132859	0.0392552	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg19_v1_chr2_+_130737234_130737236	0.0392242	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg19_v1_chr4_-_24586178_24586200	0.039182	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr1_-_52344406_52344424	0.0391767	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr5_+_55033844_55033908	0.0391465	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr6_-_132967141_132967165	0.0390615	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg19_v1_chr4_+_123747815_123747873	0.0390473	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg19_v1_chr11_+_101983170_101983244	0.0390096	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr18_+_33552587_33552747	0.0389494	SOX2.p2	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21	NM_031446|C18orf21|83608|chromosome 18 open reading frame 21	BC108730|C18orf21|83608|chromosome 18 open reading frame 21	BC119765|C18orf21|83608|chromosome 18 open reading frame 21	BC119766|C18orf21|83608|chromosome 18 open reading frame 21	AF277182|C18orf21|83608|chromosome 18 open reading frame 21	AF277189|C18orf21|83608|chromosome 18 open reading frame 21	BC025950|C18orf21|83608|chromosome 18 open reading frame 21
hg19_v1_chr8_-_72756687_72756730	0.0388816	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg19_v1_chrX_+_85517970_85517970	0.0388733	SOX2.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg19_v1_chr11_-_27742224_27742325	0.0388135	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr17_-_31204187_31204239	0.0386846	SOX2.p2	BC030602|MYO1D|4642|myosin ID
hg19_v1_chr14_+_50360359_50360454	0.0386415	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg19_v1_chr11_+_64949413_64949466	0.0386396	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg19_v1_chr1_-_1167374_1167410	0.0386292	SOX2.p2	AK075352|SDF4|51150|stromal cell derived factor 4	BC022375|SDF4|51150|stromal cell derived factor 4	AK027277|SDF4|51150|stromal cell derived factor 4	AF153686|SDF4|51150|stromal cell derived factor 4	AF178986|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr1_-_52344433_52344608	0.0383353	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr17_+_40169024_40169079	0.0383046	SOX2.p2	BC063498|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2
hg19_v1_chr14_-_54908035_54908197	0.038275	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr2_+_48757292_48757358	0.0382696	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg19_v1_chr12_+_50869531_50869643	0.0380689	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr16_+_66638632_66638650	0.0380472	SOX2.p2	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr4_-_39979549_39979637	0.0379259	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr22_+_50312278_50312330	0.0379123	SOX2.p2	DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr6_+_25279651_25279666	0.0378198	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr2_+_181845605_181845681	0.0378123	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr10_+_88985204_88985256	0.03781	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001099338|FAM22A|728118|family with sequence similarity 22, member A	AB095940|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr1_-_52343690_52343711	0.0378053	SOX2.p2	AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr14_+_74815194_74815211	0.0376734	SOX2.p2	BC053325|VRTN|55237|vertebrae development homolog (pig)	AK023213|VRTN|55237|vertebrae development homolog (pig)	AK001673|VRTN|55237|vertebrae development homolog (pig)
hg19_v1_chr2_-_27545901_27545984	0.0375673	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg19_v1_chr12_-_18243052_18243113	0.0375585	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr2_-_86422504_86422590	0.0373836	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr1_+_45266048_45266216	0.0373403	SOX2.p2	AB209875|PLK3|1263|polo-like kinase 3	EU832631|PLK3|1263|polo-like kinase 3	EU832706|PLK3|1263|polo-like kinase 3	BC004135|PLK3|1263|polo-like kinase 3	BC004198|PLK3|1263|polo-like kinase 3	BC013960|PLK3|1263|polo-like kinase 3	U56998|PLK3|1263|polo-like kinase 3
hg19_v1_chr8_+_77593522_77593534	0.0372984	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg19_v1_chr10_-_33623299_33623608	0.037181	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg19_v1_chr7_-_83270746_83270746	0.037065	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr17_+_48638339_48638448	0.0369205	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr21_-_27543445_27543445	0.0367968	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr7_+_120965420_120965420	0.0367308	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg19_v1_chr7_-_27187367_27187392	0.0366897	SOX2.p2	BC069497|HOXA6|3203|homeobox A6	BC104915|HOXA6|3203|homeobox A6	BC104917|HOXA6|3203|homeobox A6	NM_024014|HOXA6|3203|homeobox A6
hg19_v1_chr6_+_170615780_170615836	0.0366028	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr15_+_85427891_85427931	0.0365848	SOX2.p2	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
hg19_v1_chr14_-_88792923_88793084	0.036462	SOX2.p2	AK315263|KCNK10|54207|potassium channel, subfamily K, member 10	EU978938|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr16_-_686292_686373	0.0364056	SOX2.p2	AK294482|C16orf13|84326|chromosome 16 open reading frame 13	AK295628|C16orf13|84326|chromosome 16 open reading frame 13	BC047118|C16orf13|84326|chromosome 16 open reading frame 13	AK057077|C16orf13|84326|chromosome 16 open reading frame 13	BC007207|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13	NM_032366|C16orf13|84326|chromosome 16 open reading frame 13
hg19_v1_chr8_-_105479147_105479284	0.0363794	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg19_v1_chr10_+_90424145_90424215	0.0363707	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg19_v1_chr17_-_8079607_8079713	0.036363	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr6_-_29455678_29455733	0.0363571	SOX2.p2	BC069127|MAS1L|116511|MAS1 oncogene-like	BC069345|MAS1L|116511|MAS1 oncogene-like	BC101176|MAS1L|116511|MAS1 oncogene-like	BC101177|MAS1L|116511|MAS1 oncogene-like	NM_052967|MAS1L|116511|MAS1 oncogene-like	BC095511|MAS1L|116511|MAS1 oncogene-like
hg19_v1_chr18_+_21594751_21594762	0.0362604	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg19_v1_chr12_-_46663207_46663207	0.0361955	SOX2.p2	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1	NM_030674|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr4_+_75023807_75023924	0.0361713	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg19_v1_chr5_-_142000899_142000906	0.0360407	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr1_-_2564428_2564502	0.03594	SOX2.p2	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1	NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1
hg19_v1_chr3_-_126373957_126373996	0.0358918	SOX2.p2	NM_001173513|TXNRD3|114112|thioredoxin reductase 3	NM_052883|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr1_+_53925071_53925144	0.0358485	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr9_+_35829375_35829581	0.035745	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr12_+_105380073_105380107	0.0357411	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg19_v1_chr11_+_5509914_5509914	0.0356006	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg19_v1_chr1_+_28696056_28696394	0.0355514	SOX2.p2	NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4	CR749449|PHACTR4|65979|phosphatase and actin regulator 4	AK025436|PHACTR4|65979|phosphatase and actin regulator 4	BC029266|PHACTR4|65979|phosphatase and actin regulator 4	BC016152|PHACTR4|65979|phosphatase and actin regulator 4	BC068508|PHACTR4|65979|phosphatase and actin regulator 4
hg19_v1_chr12_+_22199219_22199239	0.0355112	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr2_-_233641225_233641274	0.0354708	SOX2.p2	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg19_v1_chr6_-_88411649_88411675	0.0354168	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg19_v1_chr9_+_117349993_117350083	0.0353594	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v1_chr6_-_31510251_31510251	0.035358	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr4_+_3371723_3371723	0.0353333	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr3_-_119963141_119963141	0.0352587	SOX2.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg19_v1_chr3_-_187009469_187009809	0.0352172	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v1_chr11_+_61129831_61129878	0.0352144	SOX2.p2	AK027724|TMEM138|51524|transmembrane protein 138	AK307371|TMEM138|51524|transmembrane protein 138	AF151030|TMEM138|51524|transmembrane protein 138	AK303219|TMEM138|51524|transmembrane protein 138	BC005201|TMEM138|51524|transmembrane protein 138	AF151032|TMEM138|51524|transmembrane protein 138
hg19_v1_chr12_-_110939877_110939944	0.0352142	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v1_chr6_+_125474800_125475079	0.0351582	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg19_v1_chr10_+_102729249_102729303	0.0350892	SOX2.p2	BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr12_+_57522247_57522318	0.0350583	SOX2.p2	BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1	BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1	NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1	X13916|LRP1|4035|low density lipoprotein receptor-related protein 1
hg19_v1_chr6_-_157745183_157745252	0.0349017	SOX2.p2	NM_018452|TMEM242|729515|transmembrane protein 242
hg19_v1_chr15_-_43212911_43213053	0.0348311	SOX2.p2	AF525400|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg19_v1_chr1_+_155293727_155293727	0.0345801	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr12_-_102455739_102455761	0.0345289	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr6_-_88411872_88411946	0.0345004	SOX2.p2	BC000764|AKIRIN2|55122|akirin 2	BC003042|AKIRIN2|55122|akirin 2
hg19_v1_chr11_-_5537815_5537955	0.0344018	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg19_v1_chr13_+_34392205_34392250	0.0342365	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr5_+_176560056_176560079	0.03421	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chrX_+_71364033_71364033	0.0340314	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg19_v1_chr19_+_3880660_3880671	0.0339519	SOX2.p2	AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr6_-_89673347_89673347	0.0339497	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr7_-_117067514_117067576	0.0339261	SOX2.p2	HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg19_v1_chr7_+_116502597_116502668	0.0338842	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr11_-_115088628_115088669	0.0338316	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr1_-_176176113_176176217	0.033746	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr12_-_114846191_114846246	0.0336928	SOX2.p2	AB051068|TBX5|6910|T-box 5	AF221714|TBX5|6910|T-box 5	NM_000192|TBX5|6910|T-box 5	NM_080717|TBX5|6910|T-box 5	Y09445|TBX5|6910|T-box 5
hg19_v1_chr2_+_68592317_68592427	0.0336788	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg19_v1_chr11_-_14380030_14380072	0.0336577	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr12_+_101988746_101988846	0.0336442	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr2_+_231921625_231921736	0.0336354	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr1_-_161102210_161102312	0.0336324	SOX2.p2	NM_001039712|DEDD|9191|death effector domain containing
hg19_v1_chr11_-_115375065_115375296	0.0334046	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr3_-_183602690_183602726	0.0333688	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr7_+_148892553_148892826	0.0333001	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg19_v1_chr19_+_41903718_41903722	0.0332064	SOX2.p2	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr5_+_34656595_34656599	0.0331346	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chr18_+_77905804_77905931	0.0331232	SOX2.p2	AK056304|LOC100130522|100130522|uncharacterized LOC100130522
hg19_v1_chr2_-_128615691_128615704	0.0331199	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr11_+_43665772_43665796	0.0330833	SOX2.p2	
hg19_v1_chr14_+_67827042_67827058	0.0330674	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr9_-_35828728_35828743	0.0330341	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg19_v1_chr12_-_72057523_72057673	0.0327834	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr20_+_57556322_57556377	0.032766	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr12_+_132379262_132379284	0.0326194	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg19_v1_chr2_-_208989081_208989312	0.0326092	SOX2.p2	HQ258094|CRYGD|1421|crystallin, gamma D	U66583|CRYGD|1421|crystallin, gamma D	BC117338|CRYGD|1421|crystallin, gamma D	BC117340|CRYGD|1421|crystallin, gamma D	NM_006891|CRYGD|1421|crystallin, gamma D
hg19_v1_chr1_-_120354058_120354202	0.0325533	SOX2.p2	AY007243|REG4|83998|regenerating islet-derived family, member 4	AF345934|REG4|83998|regenerating islet-derived family, member 4	BC017089|REG4|83998|regenerating islet-derived family, member 4	AF254415|REG4|83998|regenerating islet-derived family, member 4	AY126670|REG4|83998|regenerating islet-derived family, member 4	AY126671|REG4|83998|regenerating islet-derived family, member 4	AY126672|REG4|83998|regenerating islet-derived family, member 4	NM_001159352|REG4|83998|regenerating islet-derived family, member 4	NM_001159353|REG4|83998|regenerating islet-derived family, member 4	NM_032044|REG4|83998|regenerating islet-derived family, member 4
hg19_v1_chr14_-_21994342_21994483	0.0324641	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr6_+_26020677_26020717	0.032456	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg19_v1_chrX_+_102965836_102965836	0.0324125	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg19_v1_chr1_-_156051788_156051809	0.0323991	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr6_-_32119667_32119699	0.0321259	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr4_+_57774090_57774236	0.0319695	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg19_v1_chr2_+_204055404_204055414	0.0319526	SOX2.p2	AB209471|RPL12|6136|ribosomal protein L12
hg19_v1_chr4_-_83295037_83295123	0.0319269	SOX2.p2	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr1_-_17765052_17765071	0.0318987	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr9_+_12774988_12775045	0.0318673	SOX2.p2	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg19_v1_chr19_-_12834628_12834841	0.0317709	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg19_v1_chr17_+_11924116_11924247	0.0316918	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg19_v1_chr3_+_100211554_100211612	0.0316896	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chr5_-_146889618_146889635	0.0316871	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr3_-_55521567_55521669	0.0315795	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr5_+_109025135_109025155	0.0314806	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg19_v1_chr8_-_21645670_21645915	0.0314259	SOX2.p2	AY326396|GFRA2|2675|GDNF family receptor alpha 2	AY941828|GFRA2|2675|GDNF family receptor alpha 2	U93703|GFRA2|2675|GDNF family receptor alpha 2	AF002700|GFRA2|2675|GDNF family receptor alpha 2	AK299623|GFRA2|2675|GDNF family receptor alpha 2	U97145|GFRA2|2675|GDNF family receptor alpha 2
hg19_v1_chr19_+_44488331_44488380	0.0313695	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg19_v1_chrX_+_48334400_48334694	0.0310318	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg19_v1_chr10_+_18429605_18429809	0.0310048	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr5_+_140723600_140723602	0.0309811	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg19_v1_chr10_-_105218644_105218647	0.0308611	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg19_v1_chr19_-_7701852_7701854	0.0308452	SOX2.p2	
hg19_v1_chr4_+_142142044_142142066	0.0307856	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg19_v1_chr20_+_57556295_57556319	0.0307741	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr3_+_123813527_123813684	0.0307609	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chr1_+_221052735_221052788	0.0306128	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg19_v1_chr17_+_30677187_30677304	0.0304038	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg19_v1_chr1_+_43148187_43148234	0.0303417	SOX2.p2	DQ891609|YBX1|4904|Y box binding protein 1	DQ894802|YBX1|4904|Y box binding protein 1
hg19_v1_chr9_-_4741085_4741262	0.0302679	SOX2.p2	AB021870|AK3|50808|adenylate kinase 3	DQ891660|AK3|50808|adenylate kinase 3	DQ894847|AK3|50808|adenylate kinase 3	AK027534|AK3|50808|adenylate kinase 3	BC013771|AK3|50808|adenylate kinase 3	NM_001199854|AK3|50808|adenylate kinase 3	AK001951|AK3|50808|adenylate kinase 3	AK001553|AK3|50808|adenylate kinase 3	AK298200|AK3|50808|adenylate kinase 3
hg19_v1_chr2_-_163695028_163695221	0.0302495	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v1_chr1_+_155108343_155108387	0.0301638	SOX2.p2	BC005943|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC010869|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC069245|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	CR457148|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg19_v1_chr6_-_30585016_30585022	0.0299313	SOX2.p2	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chr1_-_78444772_78444778	0.0298981	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr6_+_153071931_153072041	0.029859	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg19_v1_chr13_-_99852925_99853010	0.0297841	SOX2.p2	BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)
hg19_v1_chr2_+_70314714_70314723	0.0297737	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr2_+_101869350_101869435	0.0296411	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr5_+_53813494_53813596	0.0295412	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg19_v1_chr17_-_655468_655503	0.0295092	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr15_-_26108236_26108471	0.0295066	SOX2.p2	EU831492|ATP10A|57194|ATPase, class V, type 10A	EU831579|ATP10A|57194|ATPase, class V, type 10A	NM_024490|ATP10A|57194|ATPase, class V, type 10A	BC052251|ATP10A|57194|ATPase, class V, type 10A
hg19_v1_chr16_+_14927586_14927700	0.0294668	SOX2.p2	NM_014287|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1
hg19_v1_chr2_+_136288953_136289168	0.0294633	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg19_v1_chr12_+_66583029_66583078	0.0293491	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr7_-_29186072_29186154	0.0293228	SOX2.p2	AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like	AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like	AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like	BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like	AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like
hg19_v1_chr13_-_84456424_84456427	0.0292633	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr1_+_155294217_155294367	0.0291148	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr3_-_186079776_186080093	0.0289559	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg19_v1_chr12_-_91398757_91398802	0.0289216	SOX2.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg19_v1_chr4_-_147442868_147443124	0.0288858	SOX2.p2	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
hg19_v1_chr11_-_62783281_62783316	0.0288642	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg19_v1_chr19_+_13229101_13229150	0.0287006	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg19_v1_chr8_+_85095702_85095768	0.0286935	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr1_+_150039815_150039913	0.028556	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr2_-_86116016_86116156	0.0284871	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr15_+_45879416_45879556	0.0284736	SOX2.p2	AF080470|PLDN|26258|pallidin homolog (mouse)	NM_012388|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr7_-_50518021_50518087	0.0284438	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg19_v1_chr5_+_179921423_179921493	0.0282782	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr1_+_87170515_87170594	0.028273	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr13_-_50367027_50367220	0.0282278	SOX2.p2	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)
hg19_v1_chr11_-_66115016_66115166	0.0281992	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v1_chr17_+_79651042_79651048	0.0281865	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr1_-_186430216_186430238	0.0281104	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg19_v1_chr17_+_42786060_42786065	0.0280777	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr15_-_42840910_42840991	0.0279263	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chr6_+_154331630_154331635	0.0279172	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg19_v1_chr2_-_73964427_73964516	0.0279081	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg19_v1_chr16_-_1832304_1832566	0.0278555	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr15_-_50647275_50647325	0.0277666	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr3_-_63849504_63849808	0.0277658	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr12_-_50419160_50419306	0.0277168	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg19_v1_chr20_-_2644777_2644892	0.0276659	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr2_-_26541916_26541969	0.0276505	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg19_v1_chr8_+_23386362_23386378	0.0275467	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr1_-_76397975_76398115	0.0273996	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg19_v1_chr8_+_98656494_98656732	0.027379	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg19_v1_chr6_+_71136141_71136173	0.0273504	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr1_+_53925482_53925579	0.0273227	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg19_v1_chr11_-_82997376_82997434	0.0273204	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg19_v1_chr1_+_62660473_62660560	0.0271493	SOX2.p2	NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1	NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1	BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1	BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1	AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1	AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1	AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1	BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1
hg19_v1_chr1_-_1167273_1167346	0.0269425	SOX2.p2	BC011244|SDF4|51150|stromal cell derived factor 4	AK299810|SDF4|51150|stromal cell derived factor 4	BC006211|SDF4|51150|stromal cell derived factor 4	BC008917|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr19_+_52873169_52873213	0.0269386	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg19_v1_chr13_+_99852678_99852678	0.0269131	SOX2.p2	AK290342|UBAC2|337867|UBA domain containing 2	NM_001144072|UBAC2|337867|UBA domain containing 2
hg19_v1_chr11_-_6704517_6704631	0.0268923	SOX2.p2	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg19_v1_chr3_-_116164363_116164384	0.0268295	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr12_+_98909331_98909404	0.0267524	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg19_v1_chr12_-_21810754_21810766	0.0267475	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr14_+_38677186_38677203	0.0266931	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg19_v1_chr3_+_148583042_148583094	0.0266625	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg19_v1_chr2_+_231921595_231921607	0.026643	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr10_-_104262404_104262511	0.0264648	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr3_-_183145854_183146025	0.026266	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg19_v1_chr17_+_74261431_74261584	0.0262046	SOX2.p2	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr10_-_27443138_27443277	0.0261655	SOX2.p2	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr17_-_3500335_3500391	0.026009	SOX2.p2	AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1
hg19_v1_chr1_-_17764811_17764913	0.0258231	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr16_-_72206348_72206348	0.0257499	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr16_+_69458562_69458566	0.025578	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr15_-_50647385_50647400	0.0255639	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr14_+_52456192_52456317	0.0254879	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr9_+_4490193_4490681	0.0254445	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr12_-_21810733_21810752	0.0254373	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr12_-_102455793_102455930	0.0253002	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr6_+_74171610_74171703	0.0252989	SOX2.p2	AL833823|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)
hg19_v1_chr10_+_98592015_98592092	0.0252936	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg19_v1_chr12_-_21810720_21810732	0.0252807	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr18_-_54305839_54305990	0.0252704	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr19_+_13080431_13080474	0.0252601	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5	HQ258091|DAND5|199699|DAN domain family, member 5
hg19_v1_chr15_+_42840991_42841067	0.025223	SOX2.p2	NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2	NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2	BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2
hg19_v1_chr1_-_21113147_21113158	0.0251626	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr19_+_40854529_40854652	0.0250486	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr2_+_109204745_109204767	0.0250218	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr15_-_65282093_65282176	0.0249099	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr2_+_113993082_113993458	0.024887	SOX2.p2	AK056052|LOC654433|654433|uncharacterized LOC654433	AK307781|LOC654433|654433|uncharacterized LOC654433	BX537688|LOC654433|654433|uncharacterized LOC654433	AK056355|LOC654433|654433|uncharacterized LOC654433	AK130275|LOC654433|654433|uncharacterized LOC654433
hg19_v1_chrX_+_84498993_84499002	0.0248729	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg19_v1_chr7_+_114055234_114055377	0.0248308	SOX2.p2	AF493430|FOXP2|93986|forkhead box P2	AF337817|FOXP2|93986|forkhead box P2	AF467257|FOXP2|93986|forkhead box P2	BC126104|FOXP2|93986|forkhead box P2	BC143866|FOXP2|93986|forkhead box P2	BC143867|FOXP2|93986|forkhead box P2
hg19_v1_chr1_+_112938799_112938853	0.0247741	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg19_v1_chr17_-_655375_655465	0.0247482	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr7_+_23530136_23530198	0.0247286	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chr19_-_36909463_36909579	0.024703	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg19_v1_chr7_-_37488554_37488556	0.0246757	SOX2.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr7_-_42276617_42276617	0.0245849	SOX2.p2	NM_000168|GLI3|2737|GLI family zinc finger 3
hg19_v1_chr6_-_136788012_136788012	0.0245676	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr7_-_140179333_140179368	0.0245551	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr16_-_75300678_75300706	0.0245368	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr19_+_55385548_55385745	0.0244741	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg19_v1_chr3_-_139258531_139258670	0.0244151	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr16_+_1203240_1203412	0.0241919	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr1_-_200378832_200378986	0.0241322	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr9_+_138413283_138413329	0.0241213	SOX2.p2	M90424|LCN1|3933|lipocalin 1	NM_001252617|LCN1|3933|lipocalin 1	NM_001252618|LCN1|3933|lipocalin 1	NM_001252619|LCN1|3933|lipocalin 1	NM_002297|LCN1|3933|lipocalin 1	BC065721|LCN1|3933|lipocalin 1	X67647|LCN1|3933|lipocalin 1	BC074925|LCN1|3933|lipocalin 1	BC074926|LCN1|3933|lipocalin 1	X62418|LCN1|3933|lipocalin 1
hg19_v1_chr9_-_19786886_19787016	0.0241101	SOX2.p2	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v1_chr3_+_183770834_183770843	0.0240357	SOX2.p2	AF459285|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	NM_130770|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	BC131799|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C
hg19_v1_chr7_+_44836309_44836323	0.0239716	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr10_-_52645430_52645440	0.0239588	SOX2.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr3_+_138067678_138067758	0.0239213	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr13_+_48877886_48877886	0.0239083	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg19_v1_chr3_+_127771287_127771305	0.0237327	SOX2.p2	AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr8_-_72756607_72756650	0.0237178	SOX2.p2	AF060154|MSC|9242|musculin
hg19_v1_chr1_+_173684136_173684231	0.0236939	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr10_+_97471535_97471535	0.023625	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr3_+_10068123_10068129	0.0235919	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr6_+_134274247_134274443	0.0235527	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr3_-_128712918_128712985	0.023479	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg19_v1_chr6_+_43149905_43149924	0.0234339	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg19_v1_chr11_+_94300473_94300683	0.0234115	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg19_v1_chr12_+_98909405_98909409	0.0234091	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr9_-_34612075_34612109	0.0233947	SOX2.p2	BC032136|C9orf23|138716|chromosome 9 open reading frame 23	NM_148178|C9orf23|138716|chromosome 9 open reading frame 23	NM_148179|C9orf23|138716|chromosome 9 open reading frame 23
hg19_v1_chr6_+_111135823_111135843	0.0232984	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg19_v1_chr2_-_25391558_25391558	0.0232934	SOX2.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg19_v1_chr9_-_116061319_116061319	0.023259	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg19_v1_chr3_-_126373873_126373956	0.0231116	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr16_-_70557430_70557459	0.0230794	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg19_v1_chr12_-_62586547_62586619	0.0230497	SOX2.p2	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v1_chr16_-_57481270_57481439	0.0227762	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr9_-_100684770_100684851	0.0226746	SOX2.p2	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg19_v1_chr1_-_226186987_226187017	0.0225909	SOX2.p2	BC016290|C1orf55|163859|chromosome 1 open reading frame 55
hg19_v1_chr6_+_37787266_37787315	0.0223907	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg19_v1_chr9_+_125281418_125281420	0.022303	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg19_v1_chr12_-_11150473_11150473	0.0221645	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg19_v1_chr3_-_63849456_63849488	0.0221239	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr20_-_52199635_52199635	0.0220664	SOX2.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg19_v1_chr4_-_10118500_10118572	0.0219683	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg19_v1_chr1_-_247171354_247171394	0.0219171	SOX2.p2	BC055096|ZNF695|57116|zinc finger protein 695	NM_001204221|ZNF695|57116|zinc finger protein 695	NM_020394|ZNF695|57116|zinc finger protein 695
hg19_v1_chr8_-_124054540_124054541	0.0217796	SOX2.p2	AY358818|DERL1|79139|Der1-like domain family, member 1	AK303826|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr14_+_20923289_20923325	0.0217645	SOX2.p2	NM_001244249|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr18_+_60383895_60383958	0.0216359	SOX2.p2	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1
hg19_v1_chr5_-_40835325_40835386	0.021575	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg19_v1_chr5_-_142783975_142784089	0.0215462	SOX2.p2	AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v1_chr19_-_42463437_42463499	0.0214058	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr5_+_108084638_108084706	0.0213601	SOX2.p2	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase	BC058030|FER|2241|fer (fps/fes related) tyrosine kinase
hg19_v1_chr12_+_98909410_98909413	0.0212642	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr6_-_2751153_2751199	0.0211235	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg19_v1_chr17_-_42992852_42992919	0.0209323	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr6_+_96025343_96025460	0.0208604	SOX2.p2	NM_024641|MANEA|79694|mannosidase, endo-alpha	BX640869|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg19_v1_chr12_-_21810769_21810778	0.0208521	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr12_+_54519836_54519881	0.020845	SOX2.p2	BC009385|LOC400043|400043|uncharacterized LOC400043
hg19_v1_chr1_-_114354864_114354899	0.0208058	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chr1_-_53018721_53018786	0.0207637	SOX2.p2	BC012047|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC018753|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC035820|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_001009881|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_015269|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK307579|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK095733|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg19_v1_chr11_-_10879365_10879672	0.0207194	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg19_v1_chr1_-_145610934_145610937	0.020714	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr1_-_26232643_26232643	0.0207124	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr17_-_42441123_42441321	0.0206743	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg19_v1_chr15_+_45879575_45879640	0.0206372	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr6_+_152011630_152011756	0.0205723	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1	AB588629|ESR1|2099|estrogen receptor 1	AB588630|ESR1|2099|estrogen receptor 1
hg19_v1_chr11_-_27723061_27723179	0.0204528	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr9_-_140444835_140444985	0.0203446	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg19_v1_chr1_-_25291474_25291611	0.0203271	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg19_v1_chr3_-_156272868_156272895	0.0202082	SOX2.p2	BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v1_chr16_-_31085503_31085640	0.0202052	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg19_v1_chr1_+_47137496_47137606	0.0201666	SOX2.p2	NM_001145474|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC067853|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC057818|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC126318|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC144026|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	BC144027|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)	FJ211596|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)
hg19_v1_chrY_-_6742028_6742067	0.0200977	SOX2.p2	BC074976|AMELY|266|amelogenin, Y-linked	BC074977|AMELY|266|amelogenin, Y-linked	BC069138|AMELY|266|amelogenin, Y-linked	M86933|AMELY|266|amelogenin, Y-linked	NM_001143|AMELY|266|amelogenin, Y-linked
hg19_v1_chrX_-_137821514_137821514	0.0200823	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr6_-_74229094_74229244	0.0200557	SOX2.p2	AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg19_v1_chr1_-_161015688_161015746	0.020055	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg19_v1_chrX_+_92929011_92929011	0.0200478	SOX2.p2	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A	NM_001171110|FAM133A|286499|family with sequence similarity 133, member A	NM_001171111|FAM133A|286499|family with sequence similarity 133, member A	NM_173698|FAM133A|286499|family with sequence similarity 133, member A
hg19_v1_chr14_+_104029278_104029344	0.0200235	SOX2.p2	NM_032374|APOPT1|84334|apoptogenic 1	AK223092|APOPT1|84334|apoptogenic 1	AK223103|APOPT1|84334|apoptogenic 1	BC007412|APOPT1|84334|apoptogenic 1
hg19_v1_chr5_+_95997871_95997986	0.0199799	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg19_v1_chr9_-_113341772_113342356	0.0199707	SOX2.p2	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v1_chr6_-_33756885_33756897	0.0199286	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg19_v1_chr1_-_85741992_85742279	0.0199173	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr9_+_66457288_66457315	0.0199083	SOX2.p2	
hg19_v1_chr12_-_56709777_56709824	0.0198895	SOX2.p2	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr1_+_19972259_19972259	0.0198541	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr3_+_10857867_10857947	0.0197506	SOX2.p2	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
hg19_v1_chr1_+_221052845_221052984	0.0196548	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg19_v1_chr19_-_46272496_46272496	0.0196447	SOX2.p2	NM_175875|SIX5|147912|SIX homeobox 5
hg19_v1_chr12_-_110906056_110906088	0.0195315	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr10_+_101292689_101292737	0.0194824	SOX2.p2	NM_145285|NKX2-3|159296|NK2 homeobox 3	BC025788|NKX2-3|159296|NK2 homeobox 3	AK313485|NKX2-3|159296|NK2 homeobox 3	AK300856|NKX2-3|159296|NK2 homeobox 3
hg19_v1_chr17_-_39675078_39675269	0.0194054	SOX2.p2	BT007261|KRT15|3866|keratin 15	DQ892990|KRT15|3866|keratin 15	DQ896238|KRT15|3866|keratin 15	BC110649|KRT15|3866|keratin 15	BC002641|KRT15|3866|keratin 15	X07696|KRT15|3866|keratin 15	AK304059|KRT15|3866|keratin 15	NM_002275|KRT15|3866|keratin 15
hg19_v1_chr7_-_140179133_140179191	0.0193088	SOX2.p2	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr11_-_107729913_107729913	0.0192764	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr6_-_105307747_105307778	0.019272	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr3_-_160283071_160283118	0.0192242	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr14_+_70078309_70078312	0.0191011	SOX2.p2	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg19_v1_chr7_+_148036528_148036603	0.0190962	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2
hg19_v1_chr19_+_48673936_48673971	0.0190683	SOX2.p2	BC043386|C19orf68|374920|chromosome 19 open reading frame 68
hg19_v1_chr9_+_136293730_136293750	0.0190232	SOX2.p2	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13
hg19_v1_chr17_-_79478956_79479000	0.0189559	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chr1_+_40942878_40942886	0.0188175	SOX2.p2	BC041873|ZNF642|339559|zinc finger protein 642
hg19_v1_chr17_+_30677178_30677185	0.0187244	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg19_v1_chr6_+_126070813_126070872	0.0186853	SOX2.p2	AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr19_-_18548788_18548965	0.0186851	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr16_-_11680756_11680823	0.0186419	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr11_-_17498322_17498365	0.0182867	SOX2.p2	U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr12_-_47219734_47219779	0.0182828	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg19_v1_chr6_-_32119717_32119723	0.0182797	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr10_+_93558281_93558447	0.0181898	SOX2.p2	AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr14_+_20923364_20923443	0.0181662	SOX2.p2	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr1_+_112938857_112938880	0.0181277	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|uncharacterized LOC100129406
hg19_v1_chr6_-_100016517_100016689	0.0179759	SOX2.p2	BC010135|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg19_v1_chr7_+_44836273_44836301	0.0179372	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr1_-_41487386_41487426	0.0179224	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg19_v1_chr8_+_133787556_133787610	0.0178676	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chrX_-_131573638_131573717	0.0178274	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg19_v1_chr3_-_49066760_49066785	0.0178025	SOX2.p2	DQ893403|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	DQ896721|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr5_-_149466126_149466166	0.0177809	SOX2.p2	AB208819|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr3_+_127771307_127771337	0.0177501	SOX2.p2	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr14_+_42076763_42076772	0.0177346	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg19_v1_chr6_+_99872769_99872859	0.0176946	SOX2.p2	
hg19_v1_chr12_+_122242580_122242643	0.0175919	SOX2.p2	NM_015048|SETD1B|23067|SET domain containing 1B	JF813787|SETD1B|23067|SET domain containing 1B
hg19_v1_chr7_+_73868111_73868218	0.0174178	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chrX_-_49121171_49121287	0.0174126	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg19_v1_chr15_-_50647349_50647361	0.0174037	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr19_+_41082792_41082792	0.0173949	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr22_+_26825220_26825428	0.0172339	SOX2.p2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg19_v1_chr12_-_110906007_110906053	0.0171768	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr1_+_33116748_33116958	0.0171634	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg19_v1_chr1_-_33813261_33813332	0.0169172	SOX2.p2	
hg19_v1_chr1_+_207669472_207669685	0.0168726	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v1_chr22_+_20104810_20105027	0.0168541	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr20_-_5100443_5100668	0.016832	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr3_+_48956272_48956295	0.0167107	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr19_+_7702010_7702014	0.0166673	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr6_+_170615849_170615911	0.0166148	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr22_-_18257194_18257220	0.0166119	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg19_v1_chr16_-_188258_188651	0.0164377	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg19_v1_chr1_+_200842082_200842165	0.016415	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg19_v1_chr7_-_80548322_80548546	0.0163987	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v1_chr5_-_40835283_40835323	0.0163501	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg19_v1_chr2_+_70314696_70314711	0.0162918	SOX2.p2	U24223|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr22_+_42394728_42394822	0.016211	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg19_v1_chrX_+_14547419_14547482	0.0161818	SOX2.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg19_v1_chr12_-_53558276_53558276	0.016124	SOX2.p2	AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase	NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase
hg19_v1_chr7_+_56119377_56119435	0.0161204	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr1_-_33502464_33502469	0.0159775	SOX2.p2	AB005621|AK2|204|adenylate kinase 2
hg19_v1_chr7_+_72742154_72742430	0.0159202	SOX2.p2	NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa	AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa	NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa	AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa	BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa	AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa
hg19_v1_chr20_-_50159037_50159242	0.0159149	SOX2.p2	EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v1_chr10_+_101088794_101088855	0.0158102	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr17_+_47074749_47074912	0.0157003	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg19_v1_chr12_+_66583004_66583016	0.0155758	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr19_-_42463500_42463541	0.0155376	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr1_+_64239566_64239753	0.0153458	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg19_v1_chr12_+_69633352_69633426	0.0152931	SOX2.p2	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr6_+_27775898_27775985	0.0152402	SOX2.p2	BC112254|HIST1H2AI|8329|histone cluster 1, H2ai	BC112256|HIST1H2AI|8329|histone cluster 1, H2ai	AK311766|HIST1H2AI|8329|histone cluster 1, H2ai	BC062305|HIST1H3F|8968|histone cluster 1, H3f	NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai	HQ258047|HIST1H2AM|8336|histone cluster 1, H2am
hg19_v1_chr6_-_105307782_105307795	0.0152086	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr17_-_74068597_74068631	0.0152073	SOX2.p2	AK002002|SRP68|6730|signal recognition particle 68kDa	NM_014230|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr19_-_2015628_2015713	0.01515	SOX2.p2	AF355797|BTBD2|55643|BTB (POZ) domain containing 2	NM_017797|BTBD2|55643|BTB (POZ) domain containing 2	AK225831|BTBD2|55643|BTB (POZ) domain containing 2
hg19_v1_chr4_+_68424444_68424527	0.0151449	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg19_v1_chr6_+_30594607_30594779	0.0150581	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg19_v1_chr6_+_31982538_31982619	0.0150151	SOX2.p2	BC063289|C4A|720|complement component 4A (Rodgers blood group)	AK304564|C4B|721|complement component 4B (Chido blood group)	NM_001002029|C4B|721|complement component 4B (Chido blood group)	NM_001242823|LOC100293534|100293534|complement C4-B-like	NM_001252204|C4A|720|complement component 4A (Rodgers blood group)	NM_007293|C4A|720|complement component 4A (Rodgers blood group)	AB209989|C4A|720|complement component 4A (Rodgers blood group)	BC146673|C4A|720|complement component 4A (Rodgers blood group)	BC151204|C4A|720|complement component 4A (Rodgers blood group)	AK293364|C4A|720|complement component 4A (Rodgers blood group)	BC144546|C4A|720|complement component 4A (Rodgers blood group)	BC146849|C4A|720|complement component 4A (Rodgers blood group)	BC171786|C4A|720|complement component 4A (Rodgers blood group)
hg19_v1_chr14_+_67827030_67827036	0.0149799	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr11_-_62368700_62368766	0.0149212	SOX2.p2	AK301569|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr19_-_17414083_17414281	0.0148574	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg19_v1_chr1_-_241799101_241799231	0.0148458	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr19_+_56186426_56186568	0.0147975	SOX2.p2	NM_001130072|EPN1|29924|epsin 1	NM_013333|EPN1|29924|epsin 1
hg19_v1_chr6_+_3259185_3259293	0.0147942	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr2_+_219646704_219647079	0.0146786	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr12_-_46662709_46662777	0.0146644	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr9_-_14398981_14398981	0.0146516	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chrX_-_128657381_128657436	0.0145067	SOX2.p2	BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v1_chr4_+_155702426_155702499	0.0144556	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg19_v1_chr17_-_73127787_73127928	0.0144069	SOX2.p2	BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic	AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic	AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic
hg19_v1_chr4_+_142142073_142142100	0.0143726	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg19_v1_chr1_+_53527723_53527759	0.0143088	SOX2.p2	NM_001199080|PODN|127435|podocan	NM_001199082|PODN|127435|podocan	NM_153703|PODN|127435|podocan
hg19_v1_chr17_-_9479124_9479138	0.0143059	SOX2.p2	BT007319|STX8|9482|syntaxin 8	DQ890985|STX8|9482|syntaxin 8	DQ894161|STX8|9482|syntaxin 8
hg19_v1_chr16_-_87799495_87799536	0.0142952	SOX2.p2	BC001044|KLHDC4|54758|kelch domain containing 4
hg19_v1_chr1_-_1624145_1624171	0.0142789	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr2_+_32502988_32503072	0.0140742	SOX2.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr3_+_47844627_47844685	0.0140476	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr8_-_22014263_22014343	0.0139179	SOX2.p2	AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3	BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3	BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3	AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3	NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3
hg19_v1_chr12_-_102455763_102455791	0.0136756	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr1_-_3566563_3566670	0.0136695	SOX2.p2	AB034912|WRAP73|49856|WD repeat containing, antisense to TP73	AK000437|WRAP73|49856|WD repeat containing, antisense to TP73	AK225525|WRAP73|49856|WD repeat containing, antisense to TP73	BC002611|WRAP73|49856|WD repeat containing, antisense to TP73	BC086311|WRAP73|49856|WD repeat containing, antisense to TP73	AK302397|WRAP73|49856|WD repeat containing, antisense to TP73	NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73
hg19_v1_chr3_+_89156804_89156897	0.013627	SOX2.p2	M83941|EPHA3|2042|EPH receptor A3	AF213460|EPHA3|2042|EPH receptor A3	BC026247|EPHA3|2042|EPH receptor A3	AK291411|EPHA3|2042|EPH receptor A3
hg19_v1_chr5_-_180230889_180230935	0.0135266	SOX2.p2	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v1_chrX_+_46696346_46696408	0.0135208	SOX2.p2	NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)
hg19_v1_chr16_-_23521794_23521801	0.013416	SOX2.p2	BC000284|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	AK308425|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr12_+_69979268_69979286	0.013414	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr6_+_132873829_132873831	0.0133278	SOX2.p2	AY183468|TAAR8|83551|trace amine associated receptor 8	BC069166|TAAR8|83551|trace amine associated receptor 8	NM_053278|TAAR8|83551|trace amine associated receptor 8
hg19_v1_chr4_-_44728518_44728611	0.0132876	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg19_v1_chr6_-_17987852_17987880	0.0132582	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_001243423|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg19_v1_chrX_+_70503512_70503532	0.0132548	SOX2.p2	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr10_-_27443279_27443304	0.0131938	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr22_-_18257221_18257225	0.0131424	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg19_v1_chr3_+_193310997_193311138	0.0131113	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr1_+_156182765_156182824	0.0130404	SOX2.p2	NM_001199653|PMF1|11243|polyamine-modulated factor 1	NM_001199654|PMF1|11243|polyamine-modulated factor 1	NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK124646|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg19_v1_chr22_-_18257160_18257189	0.01302	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg19_v1_chr7_-_107880492_107880613	0.0129938	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr2_+_70314560_70314629	0.0129929	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr5_+_68666531_68666531	0.0128889	SOX2.p2	AF076838|RAD17|5884|RAD17 homolog (S. pombe)	NM_002873|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr2_-_55277698_55277733	0.0128421	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr17_+_41924515_41924584	0.0128311	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg19_v1_chr14_+_69726680_69726680	0.0127936	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr3_+_9851643_9851643	0.0126791	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg19_v1_chr3_-_49066813_49066847	0.0126628	SOX2.p2	BC009236|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC015567|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC012840|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	J04208|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC006124|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	AK293397|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr11_+_196760_196794	0.0126484	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg19_v1_chr7_-_27196163_27196328	0.0125855	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg19_v1_chr3_+_111718006_111718269	0.0125477	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg19_v1_chr6_-_135375954_135376035	0.0125418	SOX2.p2	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)	AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)	AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)	U87791|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)
hg19_v1_chr6_+_170615838_170615848	0.0124102	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr4_+_6717899_6717945	0.0123895	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr7_-_45151297_45151328	0.0123314	SOX2.p2	AK300489|TBRG4|9238|transforming growth factor beta regulator 4	AL833840|TBRG4|9238|transforming growth factor beta regulator 4	AK001281|TBRG4|9238|transforming growth factor beta regulator 4	AB023165|TBRG4|9238|transforming growth factor beta regulator 4	NM_004749|TBRG4|9238|transforming growth factor beta regulator 4	NM_030900|TBRG4|9238|transforming growth factor beta regulator 4	NM_199122|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr12_+_7080077_7080078	0.0122516	SOX2.p2	AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr3_+_127771342_127771391	0.0122346	SOX2.p2	
hg19_v1_chr14_-_106725620_106725737	0.0122242	SOX2.p2	AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31	X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23	AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC015760|IGHM|3507|immunoglobulin heavy constant mu	BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097950|IGHM|3507|immunoglobulin heavy constant mu	AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg19_v1_chr4_-_111563278_111563278	0.012196	SOX2.p2	NM_001204397|PITX2|5308|paired-like homeodomain 2	NM_001204398|PITX2|5308|paired-like homeodomain 2	NM_001204399|PITX2|5308|paired-like homeodomain 2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2
hg19_v1_chr12_+_109535922_109536131	0.0121336	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg19_v1_chr8_-_93977715_93977816	0.0120999	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg19_v1_chr6_-_84140758_84140825	0.0120726	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr15_+_69606741_69606741	0.0120083	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr12_-_120907535_120907613	0.0118629	SOX2.p2	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr1_-_153283166_153283193	0.0118469	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg19_v1_chr2_+_204192915_204193355	0.0118087	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg19_v1_chr14_-_107099379_107099668	0.0117927	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg19_v1_chr19_+_41082786_41082791	0.0117555	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr6_-_30640618_30640780	0.0117077	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chr19_+_41770057_41770241	0.0115936	SOX2.p2	NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr3_+_100053544_100053671	0.0115838	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg19_v1_chr12_+_69080722_69080805	0.0114999	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr1_+_151138497_151138628	0.0113195	SOX2.p2	NM_001204856|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	AK301644|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1
hg19_v1_chr1_+_28844762_28844803	0.0112534	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr19_+_4007690_4007768	0.0112492	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg19_v1_chr1_-_27226937_27226965	0.0111157	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr12_+_7080081_7080186	0.0109842	SOX2.p2	AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr2_+_113033146_113033177	0.0109094	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg19_v1_chr10_+_104221158_104221207	0.0108962	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg19_v1_chr11_+_71544245_71544245	0.0108759	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg19_v1_chr17_-_7518124_7518489	0.010824	SOX2.p2	BC067272|FXR2|9513|fragile X mental retardation, autosomal homolog 2	BC020090|FXR2|9513|fragile X mental retardation, autosomal homolog 2	NM_004860|FXR2|9513|fragile X mental retardation, autosomal homolog 2
hg19_v1_chr17_-_74068576_74068577	0.010792	SOX2.p2	BC020238|SRP68|6730|signal recognition particle 68kDa	AK301100|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr10_-_27443309_27443348	0.0107399	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_001253866|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr2_-_27531113_27531129	0.0107144	SOX2.p2	BC104470|UCN|7349|urocortin	BC104471|UCN|7349|urocortin	NM_003353|UCN|7349|urocortin
hg19_v1_chr4_-_82392971_82392996	0.0106496	SOX2.p2	BX648337|RASGEF1B|153020|RasGEF domain family, member 1B	BC121003|RASGEF1B|153020|RasGEF domain family, member 1B	BC121004|RASGEF1B|153020|RasGEF domain family, member 1B
hg19_v1_chr3_-_49158256_49158271	0.0105243	SOX2.p2	AK294756|USP19|10869|ubiquitin specific peptidase 19
hg19_v1_chr3_-_49066858_49066883	0.0104891	SOX2.p2	NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr9_-_36401149_36401201	0.0104549	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg19_v1_chr17_+_37026111_37026117	0.010443	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg19_v1_chr16_+_76311175_76311305	0.0103649	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg19_v1_chr18_+_20715726_20715726	0.0102477	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr19_+_41082729_41082770	0.0102104	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr7_-_155326538_155326556	0.0101881	SOX2.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg19_v1_chr9_-_140484899_140484965	0.0101168	SOX2.p2	BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19	AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19	AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19	NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19
hg19_v1_chr19_-_58609574_58609587	0.0100767	SOX2.p2	AY279352|ZSCAN18|65982|zinc finger and SCAN domain containing 18	BC022846|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AK225548|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr2_+_70314781_70314874	0.0100262	SOX2.p2	Z29505|PCBP1|5093|poly(rC) binding protein 1	X78137|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr8_+_19796840_19796890	0.0100223	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg19_v1_chr2_+_32502956_32502969	0.010012	SOX2.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr21_-_30257611_30257715	0.00999344	SOX2.p2	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg19_v1_chr3_+_57743027_57743378	0.0098208	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg19_v1_chr20_+_35201948_35202055	0.00975387	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg19_v1_chr6_-_127664511_127664535	0.00974858	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr2_+_70314734_70314760	0.00971188	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr19_-_12912602_12912727	0.0096963	SOX2.p2	BC000452|PRDX2|7001|peroxiredoxin 2	BC003022|PRDX2|7001|peroxiredoxin 2	BC064138|PRDX2|7001|peroxiredoxin 2	Z22548|PRDX2|7001|peroxiredoxin 2	AK289485|PRDX2|7001|peroxiredoxin 2	AK293957|PRDX2|7001|peroxiredoxin 2	BC039428|PRDX2|7001|peroxiredoxin 2	AK022395|PRDX2|7001|peroxiredoxin 2	NM_005809|PRDX2|7001|peroxiredoxin 2	NM_181738|PRDX2|7001|peroxiredoxin 2
hg19_v1_chr16_+_1728290_1728323	0.00966781	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr16_-_11680146_11680228	0.0096661	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr3_+_52719935_52720108	0.00965477	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg19_v1_chr16_+_71496180_71496197	0.00962617	SOX2.p2	
hg19_v1_chr17_+_27046990_27047027	0.00955779	SOX2.p2	NM_000984|RPL23A|6147|ribosomal protein L23a	U43701|RPL23A|6147|ribosomal protein L23a	AK130965|RPL23A|6147|ribosomal protein L23a	AK312123|RPL23A|6147|ribosomal protein L23a	BC058041|RPL23A|6147|ribosomal protein L23a	U37230|RPL23A|6147|ribosomal protein L23a	BC014459|RPL23A|6147|ribosomal protein L23a	U02032|RPL23A|6147|ribosomal protein L23a
hg19_v1_chr19_+_10791025_10791071	0.00955012	SOX2.p2	
hg19_v1_chr15_-_82824842_82824944	0.00950381	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	NM_001199057|RPS17L|100505503|ribosomal protein S17-like	BC062715|RPS17|6218|ribosomal protein S17
hg19_v1_chr15_+_22955754_22955754	0.00950167	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chrX_+_106045880_106046083	0.00939041	SOX2.p2	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)
hg19_v1_chr20_+_34042908_34043241	0.00915806	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg19_v1_chr6_-_38670922_38670953	0.00906538	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg19_v1_chr7_-_93633527_93633702	0.0090609	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg19_v1_chr12_-_56709656_56709772	0.00904585	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr3_-_10067989_10068077	0.00899211	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg19_v1_chr1_-_169764030_169764034	0.00890197	SOX2.p2	AL035369|METTL18|92342|methyltransferase like 18	NM_033418|METTL18|92342|methyltransferase like 18	AK313909|METTL18|92342|methyltransferase like 18
hg19_v1_chr3_-_160283361_160283416	0.00885208	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr17_-_74068583_74068587	0.00878058	SOX2.p2	AK126258|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr5_+_140560979_140560979	0.00859337	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg19_v1_chr10_-_127569851_127569883	0.00852324	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg19_v1_chr12_+_106751435_106751506	0.00848338	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v1_chr17_+_42785975_42786050	0.00843459	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr6_-_84140651_84140734	0.00840992	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chrX_+_47053271_47053296	0.00838633	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg19_v1_chr13_+_45694647_45694790	0.00834225	SOX2.p2	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr14_-_106691698_106691978	0.00831434	SOX2.p2	
hg19_v1_chr1_+_236558715_236558929	0.00828352	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg19_v1_chr16_+_3533475_3533617	0.00827245	SOX2.p2	AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v1_chr19_+_58898634_58898670	0.00823589	SOX2.p2	AK223106|RPS5|6193|ribosomal protein S5	AK311938|RPS5|6193|ribosomal protein S5	D28455|RPS5|6193|ribosomal protein S5	NM_001009|RPS5|6193|ribosomal protein S5	BC015405|RPS5|6193|ribosomal protein S5	BC018828|RPS5|6193|ribosomal protein S5	BC018151|RPS5|6193|ribosomal protein S5	BC035830|RPS5|6193|ribosomal protein S5	U14970|RPS5|6193|ribosomal protein S5
hg19_v1_chr16_+_66637934_66638059	0.00809467	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr14_+_105780903_105781178	0.00806458	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg19_v1_chr1_-_200379165_200379223	0.00806094	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg19_v1_chr2_-_109150596_109150695	0.00804915	SOX2.p2	BC004487|FLJ38668|644903|uncharacterized LOC644903	AK095987|FLJ38668|644903|uncharacterized LOC644903
hg19_v1_chr10_-_97321094_97321184	0.00804176	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg19_v1_chr7_-_2595327_2595404	0.00801842	SOX2.p2	AK131083|BRAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BRAT1|221927|BRCA1-associated ATM activator 1
hg19_v1_chr2_-_47403613_47403639	0.00797576	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr6_-_88299666_88299690	0.00797427	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr21_-_35288027_35288157	0.00786885	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v1_chr10_-_120514277_120514298	0.00780419	SOX2.p2	
hg19_v1_chr1_+_156589085_156589288	0.00767895	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg19_v1_chr15_-_95870310_95870328	0.00767685	SOX2.p2	BC040875|LOC400456|400456|uncharacterized LOC400456
hg19_v1_chr1_+_16767166_16767203	0.00767554	SOX2.p2	NM_001145277|NECAP2|55707|NECAP endocytosis associated 2	NM_001145278|NECAP2|55707|NECAP endocytosis associated 2	NM_018090|NECAP2|55707|NECAP endocytosis associated 2
hg19_v1_chr3_+_127634317_127634319	0.00758716	SOX2.p2	AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg19_v1_chr5_+_61601944_61602002	0.00756487	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_001243952|KIF2A|3796|kinesin heavy chain member 2A	NM_001243953|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr8_-_24814028_24814132	0.00741437	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg19_v1_chr12_-_56709831_56710127	0.00725735	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr17_-_74068582_74068582	0.00725642	SOX2.p2	AK074698|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr6_+_31515352_31515388	0.00724239	SOX2.p2	AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chr10_-_118429469_118429480	0.00713672	SOX2.p2	AK097587|C10orf82|143379|chromosome 10 open reading frame 82	BC021737|C10orf82|143379|chromosome 10 open reading frame 82	NM_144661|C10orf82|143379|chromosome 10 open reading frame 82
hg19_v1_chr1_-_154193073_154193272	0.00710599	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg19_v1_chr6_+_71276606_71276645	0.00706471	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg19_v1_chr19_+_9938587_9938639	0.00697662	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg19_v1_chr4_+_2471179_2471182	0.00686443	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg19_v1_chr5_+_85913762_85913872	0.00684077	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr8_+_29952971_29953028	0.0068062	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr3_+_184033936_184033978	0.0065711	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr11_+_111411232_111411232	0.0065136	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg19_v1_chr2_+_160568973_160569017	0.00648928	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr15_-_90455918_90456292	0.00644499	SOX2.p2	AK093274|C15orf38|348110|chromosome 15 open reading frame 38	AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	BC053602|C15orf38|348110|chromosome 15 open reading frame 38	NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	NM_182616|C15orf38|348110|chromosome 15 open reading frame 38
hg19_v1_chr15_-_65412175_65412292	0.00642955	SOX2.p2	BT007395|PDCD7|10081|programmed cell death 7	BC016992|PDCD7|10081|programmed cell death 7
hg19_v1_chr14_+_67827077_67827084	0.00641485	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr5_+_140864626_140864743	0.00639128	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg19_v1_chr22_+_39077953_39077957	0.00632589	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr6_-_88299692_88299723	0.00628554	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr18_-_44702647_44702731	0.00628535	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr4_-_109087876_109087952	0.00617414	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr18_-_33709204_33709379	0.00613486	SOX2.p2	U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6
hg19_v1_chr6_-_166582129_166582130	0.00601037	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg19_v1_chr6_-_27835308_27835370	0.00599514	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr7_-_33102174_33102471	0.00588544	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg19_v1_chrX_-_100603673_100603749	0.00585823	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v1_chr2_-_128568666_128568741	0.00584146	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg19_v1_chr5_-_1882764_1882879	0.00583789	SOX2.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg19_v1_chr1_+_117602944_117602964	0.00579195	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg19_v1_chr17_-_40169130_40169182	0.00574574	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr12_+_57916607_57916693	0.00564838	SOX2.p2	AK056399|MBD6|114785|methyl-CpG binding domain protein 6	AK296990|MBD6|114785|methyl-CpG binding domain protein 6	NM_052897|MBD6|114785|methyl-CpG binding domain protein 6	BC065530|MBD6|114785|methyl-CpG binding domain protein 6
hg19_v1_chr8_-_22785228_22785420	0.005599	SOX2.p2	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4	BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4	NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4
hg19_v1_chr13_-_36920603_36920645	0.00555917	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr4_-_5890142_5890237	0.00543014	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr6_+_43149925_43149950	0.00540973	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg19_v1_chr3_-_47555079_47555206	0.00540427	SOX2.p2	DQ787088|C3orf75|54859|chromosome 3 open reading frame 75	BC000623|C3orf75|54859|chromosome 3 open reading frame 75	BC014204|C3orf75|54859|chromosome 3 open reading frame 75	AK225721|C3orf75|54859|chromosome 3 open reading frame 75	AK000218|C3orf75|54859|chromosome 3 open reading frame 75	AK298202|C3orf75|54859|chromosome 3 open reading frame 75	NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75
hg19_v1_chr16_+_1832928_1832990	0.00536527	SOX2.p2	AK093593|NUBP2|10101|nucleotide binding protein 2	NM_012225|NUBP2|10101|nucleotide binding protein 2	BC008005|NUBP2|10101|nucleotide binding protein 2	AK001023|NUBP2|10101|nucleotide binding protein 2	AF118394|NUBP2|10101|nucleotide binding protein 2	BC002768|NUBP2|10101|nucleotide binding protein 2	BX648907|NUBP2|10101|nucleotide binding protein 2	AK315611|NUBP2|10101|nucleotide binding protein 2	AK300696|NUBP2|10101|nucleotide binding protein 2
hg19_v1_chr15_+_80352488_80352513	0.00535095	SOX2.p2	NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr19_+_18794487_18794559	0.0052364	SOX2.p2	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1	BC028050|CRTC1|23373|CREB regulated transcription coactivator 1	DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1	DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1	AB014516|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr15_-_65282227_65282265	0.00522957	SOX2.p2	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr12_+_69979447_69979652	0.00514914	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr19_-_18548118_18548118	0.0050696	SOX2.p2	AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr15_-_63892950_63893135	0.00506715	SOX2.p2	BC017581|LOC100130855|100130855|uncharacterized LOC100130855	BC036918|LOC100130855|100130855|uncharacterized LOC100130855	AK093077|LOC100130855|100130855|uncharacterized LOC100130855
hg19_v1_chr8_+_68864341_68864363	0.00503704	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr8_-_124054591_124054647	0.00497164	SOX2.p2	NM_001134671|DERL1|79139|Der1-like domain family, member 1	NM_024295|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr6_-_38670882_38670902	0.00490161	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I
hg19_v1_chr6_-_38670915_38670919	0.00488719	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg19_v1_chr4_-_24586176_24586177	0.00488204	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr13_-_36920777_36920939	0.00482778	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr14_+_67827087_67827147	0.00481372	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr13_+_24844846_24844950	0.00480627	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr18_+_39535211_39535256	0.00472752	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg19_v1_chr18_+_77794345_77794588	0.00469948	SOX2.p2	AK307212|RBFA|79863|ribosome binding factor A (putative)	NM_001171967|RBFA|79863|ribosome binding factor A (putative)	NM_024805|RBFA|79863|ribosome binding factor A (putative)	AK024825|RBFA|79863|ribosome binding factor A (putative)	AK311463|RBFA|79863|ribosome binding factor A (putative)	AK311239|RBFA|79863|ribosome binding factor A (putative)	AF261073|RBFA|79863|ribosome binding factor A (putative)	AF439745|RBFA|79863|ribosome binding factor A (putative)	BC057772|RBFA|79863|ribosome binding factor A (putative)	BC014195|RBFA|79863|ribosome binding factor A (putative)
hg19_v1_chr8_-_95565669_95565745	0.00460755	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429
hg19_v1_chr19_+_44576266_44576354	0.00458812	SOX2.p2	AY458845|ZNF284|342909|zinc finger protein 284	NM_001037813|ZNF284|342909|zinc finger protein 284	CR936662|ZNF284|342909|zinc finger protein 284
hg19_v1_chr1_-_21377387_21377394	0.00449836	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr4_+_5053464_5053590	0.0044621	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr2_+_219081864_219081874	0.00436039	SOX2.p2	NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chrX_-_85302538_85302565	0.00429356	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg19_v1_chr6_-_38670904_38670912	0.00426487	SOX2.p2	BC011365|GLO1|2739|glyoxalase I
hg19_v1_chr10_-_123734641_123734702	0.00421036	SOX2.p2	
hg19_v1_chr19_+_57791794_57791981	0.00418044	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg19_v1_chr7_+_100209724_100209815	0.00417209	SOX2.p2	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr19_+_18794391_18794458	0.00414565	SOX2.p2	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr1_-_23694497_23694900	0.0041447	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg19_v1_chr2_-_170681352_170681419	0.00407502	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg19_v1_chr19_+_2977480_2977652	0.004067	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v1_chr8_+_29952921_29952965	0.00402428	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr15_-_48937795_48938064	0.00400214	SOX2.p2	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg19_v1_chr6_-_30640781_30640829	0.00398737	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chr18_-_54305657_54305837	0.00393341	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr8_+_23386468_23386579	0.00390112	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	HQ258387|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr6_-_88299726_88299753	0.00383219	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr14_+_103800534_103800546	0.00373709	SOX2.p2	AL080102|EIF5|1983|eukaryotic translation initiation factor 5	AK026933|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr8_+_23386386_23386443	0.00372525	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr1_+_29138653_29138653	0.00364592	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg19_v1_chr16_+_57496548_57496568	0.00364561	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr12_+_69202796_69202806	0.0036048	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg19_v1_chr22_+_39077960_39077974	0.00354887	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr14_-_36988902_36988902	0.00338557	SOX2.p2	NM_003317|NKX2-1|7080|NK2 homeobox 1	U33749|NKX2-1|7080|NK2 homeobox 1
hg19_v1_chr16_-_72206023_72206063	0.00333213	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr19_-_54824343_54824408	0.00328825	SOX2.p2	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
hg19_v1_chr6_-_30028755_30028971	0.00325797	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BC067890|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg19_v1_chr12_+_45609891_45609924	0.00324484	SOX2.p2	BC098410|ANO6|196527|anoctamin 6
hg19_v1_chr2_-_3605849_3605909	0.00321965	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg19_v1_chr12_+_124773709_124773709	0.00320121	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg19_v1_chr17_-_39156106_39156145	0.00316015	SOX2.p2	DQ892403|KRTAP3-2|83897|keratin associated protein 3-2	DQ895615|KRTAP3-2|83897|keratin associated protein 3-2	AJ406932|KRTAP3-2|83897|keratin associated protein 3-2	NM_031959|KRTAP3-2|83897|keratin associated protein 3-2	BC034582|KRTAP3-2|83897|keratin associated protein 3-2
hg19_v1_chr11_+_34073188_34073238	0.00315724	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg19_v1_chr10_+_35464514_35464549	0.0031435	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chrX_-_16730669_16731058	0.00314299	SOX2.p2	NM_175859|CTPS2|56474|CTP synthase II	BC034986|CTPS2|56474|CTP synthase II	AK125348|CTPS2|56474|CTP synthase II	AF226667|CTPS2|56474|CTP synthase II	AK024070|CTPS2|56474|CTP synthase II	AK023549|CTPS2|56474|CTP synthase II	NM_019857|CTPS2|56474|CTP synthase II
hg19_v1_chr11_-_45939568_45939673	0.0030779	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg19_v1_chr6_-_84140744_84140753	0.00302696	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr1_-_52521046_52521046	0.00301437	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr2_+_219646448_219646500	0.00298262	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr8_-_18871163_18871410	0.00298232	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr15_-_65360297_65360387	0.00293091	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg19_v1_chr19_+_51728319_51728367	0.00291994	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg19_v1_chr12_+_45609832_45609866	0.00284001	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg19_v1_chr3_-_57583153_57583228	0.00283277	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr3_+_66119284_66119284	0.00275546	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg19_v1_chr7_+_95115212_95115374	0.00273684	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr15_+_78730477_78730566	0.002661	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr2_+_155555092_155555287	0.0026271	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v1_chr17_-_55927377_55927432	0.00260497	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg19_v1_chr5_-_134735565_134735581	0.0026046	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr6_-_38670871_38670880	0.00251404	SOX2.p2	BC015934|GLO1|2739|glyoxalase I
hg19_v1_chr2_-_161350304_161350330	0.00240626	SOX2.p2	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg19_v1_chr1_-_156722023_156722239	0.00237998	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg19_v1_chr17_+_42634598_42635055	0.00235558	SOX2.p2	NM_001466|FZD2|2535|frizzled family receptor 2	BC052266|FZD2|2535|frizzled family receptor 2	L37882|FZD2|2535|frizzled family receptor 2	BC113402|FZD2|2535|frizzled family receptor 2	BC113404|FZD2|2535|frizzled family receptor 2	AB017364|FZD2|2535|frizzled family receptor 2
hg19_v1_chr8_-_27115935_27115980	0.00233995	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chr17_-_79980685_79980777	0.00231984	SOX2.p2	BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)
hg19_v1_chr6_-_30585024_30585083	0.00230753	SOX2.p2	BC150310|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chr12_-_3862353_3862411	0.00229843	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg19_v1_chr11_-_62369097_62369177	0.00228666	SOX2.p2	BC023656|MTA2|9219|metastasis associated 1 family, member 2	BC053650|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr16_-_29937523_29937530	0.0022816	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr10_+_91092238_91092329	0.00226938	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr5_+_85913755_85913761	0.00225807	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr13_+_45694585_45694644	0.00225695	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr22_+_30279201_30279321	0.00225435	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg19_v1_chr12_+_7079943_7080075	0.00225413	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr4_-_83295136_83295171	0.00225354	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr16_+_57496574_57496636	0.00222324	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr19_-_50432952_50433054	0.00221186	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr2_+_207024614_207024703	0.0021775	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr13_+_113656027_113656042	0.00213786	SOX2.p2	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	AK295047|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr2_-_74007101_74007285	0.00213032	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg19_v1_chr15_-_65477441_65477562	0.00210258	SOX2.p2	BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr1_+_220267418_220267487	0.00208114	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr1_+_45792544_45792576	0.00208109	SOX2.p2	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg19_v1_chr11_-_118084073_118084073	0.00207154	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr11_+_82783118_82783119	0.00204614	SOX2.p2	BC031316|LOC100506233|100506233|uncharacterized LOC100506233
hg19_v1_chr17_+_40925443_40925466	0.00197546	SOX2.p2	BC006282|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	NM_032353|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	AK312092|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)
hg19_v1_chr6_+_31515391_31515471	0.00181229	SOX2.p2	X77909|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105064|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105068|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC143671|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AK313888|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097419|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097420|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097421|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097422|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097423|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097424|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097425|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097426|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097427|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097428|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097429|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	EU446511|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chrX_-_74743299_74743336	0.00172316	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg19_v1_chr20_+_35234077_35234143	0.00165375	SOX2.p2	NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr1_-_111148974_111148990	0.00163834	SOX2.p2	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg19_v1_chr9_-_32552550_32552568	0.00163594	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr22_-_18257238_18257430	0.00152464	SOX2.p2	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_001244569|BID|637|BH3 interacting domain death agonist	NM_001244570|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist	NM_001244567|BID|637|BH3 interacting domain death agonist
hg19_v1_chr4_+_86749045_86749064	0.00151182	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr12_-_26277807_26278036	0.00150046	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr11_+_63753902_63753938	0.0014255	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr2_-_3605926_3605958	0.00141991	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1
hg19_v1_chrX_+_102192199_102192199	0.00121937	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg19_v1_chr1_+_43148168_43148173	0.00121754	SOX2.p2	BC015208|YBX1|4904|Y box binding protein 1
hg19_v1_chr20_+_35234152_35234175	0.00115239	SOX2.p2	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr14_+_20923705_20923804	0.00112405	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr19_+_7701976_7702009	0.00103414	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr3_-_55521330_55521334	0.000978775	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr7_-_93189121_93189121	0.000969559	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg19_v1_chr1_+_40943301_40943301	0.000958039	SOX2.p2	AK122618|ZNF642|339559|zinc finger protein 642	NM_198494|ZNF642|339559|zinc finger protein 642
hg19_v1_chr6_+_126070895_126070922	0.000910816	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr8_+_65492794_65492923	0.000880998	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg19_v1_chr10_-_128077011_128077051	0.000828971	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr2_+_231921608_231921624	0.000804821	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr10_+_127408225_127408399	0.000779341	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr19_-_22379752_22379752	0.00065057	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg19_v1_chr11_+_6518489_6518530	0.00063233	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg19_v1_chr2_+_37311593_37311702	0.000629906	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg19_v1_chr13_+_113656050_113656067	0.000576616	SOX2.p2	BC011853|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	BC020208|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr13_+_32420828_32420977	0.000566129	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg19_v1_chr3_-_10149763_10149914	0.000564994	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg19_v1_chr7_+_100209941_100210203	0.000557879	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr15_+_80987953_80988065	0.000550061	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg19_v1_chr14_-_67826414_67826719	0.000520739	SOX2.p2	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg19_v1_chr16_+_4902076_4902215	0.000502536	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr16_+_24550848_24550939	0.000494819	SOX2.p2	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr3_-_64009094_64009206	0.000467744	SOX2.p2	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v1_chr9_-_32552573_32552632	0.000410962	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr19_-_55767103_55767150	0.000405412	SOX2.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr3_+_183852809_183852825	0.000252051	SOX2.p2	BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg19_v1_chr20_+_35234210_35234398	0.00013822	SOX2.p2	BC004446|C20orf24|55969|chromosome 20 open reading frame 24	BC001871|C20orf24|55969|chromosome 20 open reading frame 24	AF274936|C20orf24|55969|chromosome 20 open reading frame 24	S83364|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr9_+_39884941_39884982	9.76575e-05	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr9_+_35538628_35538628	9.54068e-05	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr1_+_43148105_43148125	2.6529e-05	SOX2.p2	BC098435|YBX1|4904|Y box binding protein 1	Z70765|YBX1|4904|Y box binding protein 1	BC106045|YBX1|4904|Y box binding protein 1	J03827|YBX1|4904|Y box binding protein 1	BC065571|YBX1|4904|Y box binding protein 1	BC071708|YBX1|4904|Y box binding protein 1	BC072014|YBX1|4904|Y box binding protein 1	BC090038|YBX1|4904|Y box binding protein 1	BC038384|YBX1|4904|Y box binding protein 1	BC000064|YBX1|4904|Y box binding protein 1	BC010430|YBX1|4904|Y box binding protein 1	BC002411|YBX1|4904|Y box binding protein 1	M24070|YBX1|4904|Y box binding protein 1
