hg19_v2_chr19_+_55888186_55888204	2.1765	BRCA1	ENST00000291934.3|TMEM190|ENSG00000160472.4|transmembrane protein 190
hg19_v2_chr20_+_9049682_9049710	1.88453	BRCA1	ENST00000334005.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4 	ENST00000378473.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr20_+_31749574_31749588	1.17708	BRCA1	ENST00000253362.2|BPIFA2|ENSG00000131050.6|BPI fold containing family A, member 2
hg19_v2_chr7_-_6010263_6010314	0.904085	BRCA1	ENST00000455618.2|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas) 	ENST00000405415.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas) 	ENST00000404406.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas) 	ENST00000542644.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr8_+_37553261_37553282	0.870625	BRCA1	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr6_+_16129308_16129402	0.84738	BRCA1	ENST00000356840.3|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein 	ENST00000349606.4|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein
hg19_v2_chr5_+_140186647_140186773	0.845322	BRCA1	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr17_-_42019836_42019844	0.840078	BRCA1	ENST00000225992.3|PPY|ENSG00000108849.3|pancreatic polypeptide
hg19_v2_chr1_-_160232312_160232323	0.791671	BRCA1	ENST00000440682.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr1_-_227505289_227505415	0.660339	BRCA1	ENST00000366765.3|CDC42BPA|ENSG00000143776.14|CDC42 binding protein kinase alpha (DMPK-like)
hg19_v2_chr20_+_52105495_52105495	0.616466	BRCA1	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr9_-_124976154_124976177	0.50754	BRCA1	ENST00000482062.1|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr11_-_119234876_119234929	0.488671	BRCA1	ENST00000525735.1|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr6_+_12717892_12717903	0.463015	BRCA1	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chrX_-_10851762_10851782	0.419467	BRCA1	ENST00000380785.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome) 	ENST00000380787.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr5_+_139027877_139027918	0.414403	BRCA1	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr10_-_61900762_61900779	0.393341	BRCA1	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr17_-_27230035_27230105	0.386413	BRCA1	ENST00000378895.4|DHRS13|ENSG00000167536.9|dehydrogenase/reductase (SDR family) member 13 	ENST00000394901.3|DHRS13|ENSG00000167536.9|dehydrogenase/reductase (SDR family) member 13
hg19_v2_chr3_+_184056614_184056641	0.363508	BRCA1	ENST00000453072.1|FAM131A|ENSG00000175182.9|family with sequence similarity 131, member A
hg19_v2_chr3_-_27410847_27410951	0.363204	BRCA1	ENST00000429845.2|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000341435.5|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000435750.1|NEK10|ENSG00000163491.12|NIMA-related kinase 10
hg19_v2_chr10_-_69597810_69597827	0.35625	BRCA1	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr8_-_72459885_72459896	0.351305	BRCA1	ENST00000523987.1|RP11-1102P16.1|ENSG00000253379.1|Uncharacterized protein
hg19_v2_chr1_-_217250231_217250349	0.350975	BRCA1	ENST00000493748.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000463665.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr7_-_121944491_121944705	0.347622	BRCA1	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chr12_-_49449107_49449107	0.340658	BRCA1	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr12_-_122879969_122879982	0.321792	BRCA1	ENST00000540304.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr1_-_160232291_160232304	0.305659	BRCA1	ENST00000368074.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000447377.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr17_-_56296580_56296666	0.295974	BRCA1	ENST00000313863.6|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000546108.1|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000337050.7|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000393119.2|MKS1|ENSG00000011143.12|Meckel syndrome, type 1
hg19_v2_chr1_-_160232197_160232284	0.290724	BRCA1	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr5_+_145583107_145583149	0.279637	BRCA1	ENST00000506502.1|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr1_-_170043709_170043874	0.247314	BRCA1	ENST00000367767.1|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3 	ENST00000361580.2|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3 	ENST00000538366.1|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3
hg19_v2_chr13_-_99910673_99910682	0.247156	BRCA1	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr7_+_99717230_99717321	0.241044	BRCA1	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chr5_+_145583156_145583180	0.237889	BRCA1	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr17_-_8702667_8702685	0.23405	BRCA1	ENST00000329805.4|MFSD6L|ENSG00000185156.4|major facilitator superfamily domain containing 6-like
hg19_v2_chr18_-_49557_49557	0.230122	BRCA1	ENST00000308911.6|RP11-683L23.1|ENSG00000173213.7|Tubulin beta-8 chain-like protein LOC260334
hg19_v2_chr1_+_159141397_159141549	0.22898	BRCA1	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr12_+_510742_510782	0.223186	BRCA1	ENST00000239830.4|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr12_+_510795_510835	0.216415	BRCA1	ENST00000412006.2|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr14_-_75179774_75179818	0.215203	BRCA1	ENST00000555249.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000556202.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000338772.5|AC007956.1|ENSG00000214670.3|Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein  	ENST00000356357.4|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1
hg19_v2_chr4_+_619347_619382	0.213091	BRCA1	ENST00000255622.6|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
hg19_v2_chrX_+_10124977_10125036	0.209852	BRCA1	ENST00000380833.4|CLCN4|ENSG00000073464.7|chloride channel, voltage-sensitive 4
hg19_v2_chr10_+_93683519_93683594	0.205061	BRCA1	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chrX_-_46187069_46187090	0.196683	BRCA1	ENST00000446884.1|RP1-30G7.2|ENSG00000236751.1|RP1-30G7.2
hg19_v2_chr11_-_27722021_27722038	0.195538	BRCA1	ENST00000356660.4|BDNF|ENSG00000176697.14|brain-derived neurotrophic factor 	ENST00000418212.1|BDNF|ENSG00000176697.14|brain-derived neurotrophic factor 	ENST00000533246.1|BDNF|ENSG00000176697.14|brain-derived neurotrophic factor
hg19_v2_chr2_-_152118352_152118393	0.189198	BRCA1	ENST00000331426.5|RBM43|ENSG00000184898.6|RNA binding motif protein 43
hg19_v2_chr11_+_47291645_47291727	0.185896	BRCA1	ENST00000395336.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000402192.2|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chr17_-_60142609_60142657	0.185126	BRCA1	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr4_-_140005443_140005650	0.179455	BRCA1	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr10_+_102295616_102295713	0.176768	BRCA1	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr8_-_116681221_116681236	0.175041	BRCA1	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr13_+_103046954_103046990	0.174933	BRCA1	ENST00000606448.1|FGF14-AS2|ENSG00000272143.1|FGF14 antisense RNA 2
hg19_v2_chr5_+_140079919_140080042	0.173391	BRCA1	ENST00000274712.3|ZMAT2|ENSG00000146007.6|zinc finger, matrin-type 2
hg19_v2_chr6_+_33172407_33172419	0.167665	BRCA1	ENST00000374662.3|HSD17B8|ENSG00000204228.3|hydroxysteroid (17-beta) dehydrogenase 8
hg19_v2_chr13_-_50018140_50018221	0.162977	BRCA1	ENST00000410043.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000347776.5|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr2_-_158182410_158182446	0.162702	BRCA1	ENST00000419116.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein 	ENST00000410096.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr4_+_619386_619407	0.160292	BRCA1	ENST00000496514.1|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
hg19_v2_chr20_-_48530230_48530276	0.160068	BRCA1	ENST00000422556.1|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chrX_+_49644470_49644470	0.156561	BRCA1	ENST00000508866.2|USP27X|ENSG00000242013.4|ubiquitin specific peptidase 27, X-linked
hg19_v2_chr13_+_30002846_30002862	0.154331	BRCA1	ENST00000542829.1|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chr11_-_110583912_110583912	0.152925	BRCA1	ENST00000533353.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000527598.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr2_-_25194476_25194500	0.150811	BRCA1	ENST00000534855.1|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr17_+_21730180_21730256	0.148926	BRCA1	ENST00000584398.1|UBBP4|ENSG00000263563.1|ubiquitin B pseudogene 4
hg19_v2_chr11_+_47291193_47291267	0.145128	BRCA1	ENST00000428807.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000402799.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000406482.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000349238.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000311027.5|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000407859.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000395344.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000444117.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chr2_-_179914760_179914884	0.1436	BRCA1	ENST00000420890.2|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000409284.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000443758.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000446116.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141
hg19_v2_chr5_+_139493665_139493718	0.130733	BRCA1	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr16_-_790887_790934	0.129633	BRCA1	ENST00000540986.1|NARFL|ENSG00000103245.9|nuclear prelamin A recognition factor-like
hg19_v2_chr16_-_790982_791014	0.125645	BRCA1	ENST00000301694.5|NARFL|ENSG00000103245.9|nuclear prelamin A recognition factor-like 	ENST00000251588.2|NARFL|ENSG00000103245.9|nuclear prelamin A recognition factor-like
hg19_v2_chr6_+_123100620_123100763	0.118533	BRCA1	ENST00000368444.3|FABP7|ENSG00000164434.7|fatty acid binding protein 7, brain
hg19_v2_chr1_-_232598163_232598163	0.116319	BRCA1	ENST00000308942.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr1_+_161736072_161736093	0.108052	BRCA1	ENST00000367942.3|ATF6|ENSG00000118217.5|activating transcription factor 6
hg19_v2_chr19_-_37663332_37663344	0.102965	BRCA1	ENST00000392157.2|ZNF585A|ENSG00000196967.6|zinc finger protein 585A
hg19_v2_chr17_-_7082861_7082883	0.0969429	BRCA1	ENST00000269299.3|ASGR1|ENSG00000141505.7|asialoglycoprotein receptor 1
hg19_v2_chr7_+_73868439_73868450	0.0902916	BRCA1	ENST00000424337.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr10_+_104404644_104404726	0.0839269	BRCA1	ENST00000462202.2|TRIM8|ENSG00000171206.9|tripartite motif containing 8
hg19_v2_chr10_-_69597828_69597854	0.0758233	BRCA1	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr10_+_92631709_92631746	0.0742635	BRCA1	ENST00000413330.1|RPP30|ENSG00000148688.9|ribonuclease P/MRP 30kDa subunit 	ENST00000277882.3|RPP30|ENSG00000148688.9|ribonuclease P/MRP 30kDa subunit
hg19_v2_chr12_+_122880045_122880153	0.0740792	BRCA1	ENST00000539034.1|RP11-450K4.1|ENSG00000257097.1|RP11-450K4.1	ENST00000535976.1|RP11-450K4.1|ENSG00000257097.1|RP11-450K4.1
hg19_v2_chr5_-_68665296_68665381	0.0701851	BRCA1	ENST00000512152.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000503245.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000512561.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000380822.4|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
hg19_v2_chr13_+_27825706_27825741	0.0698563	BRCA1	ENST00000272274.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000319826.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000326092.4|RPL21|ENSG00000122026.6|ribosomal protein L21
hg19_v2_chr14_-_60097524_60097538	0.0677065	BRCA1	ENST00000342503.4|RTN1|ENSG00000139970.12|reticulon 1
hg19_v2_chr18_-_23671139_23671190	0.0592334	BRCA1	ENST00000579061.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000542420.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr10_-_102289611_102289757	0.0582739	BRCA1	ENST00000299166.4|NDUFB8|ENSG00000166136.11|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 	ENST00000370320.4|NDUFB8|ENSG00000166136.11|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 	ENST00000535773.1|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000531258.1|NDUFB8|ENSG00000166136.11|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 	ENST00000370322.1|NDUFB8|ENSG00000166136.11|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
hg19_v2_chr14_-_60097297_60097403	0.0573762	BRCA1	ENST00000395090.1|RTN1|ENSG00000139970.12|reticulon 1
hg19_v2_chr21_+_46066331_46066331	0.050119	BRCA1	ENST00000334670.8|KRTAP10-11|ENSG00000243489.2|keratin associated protein 10-11
hg19_v2_chr9_+_35792151_35792151	0.0484806	BRCA1	ENST00000342694.2|NPR2|ENSG00000159899.10|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)
hg19_v2_chr19_-_37663572_37663643	0.0448538	BRCA1	ENST00000588354.1|ZNF585A|ENSG00000196967.6|zinc finger protein 585A 	ENST00000292841.5|ZNF585A|ENSG00000196967.6|zinc finger protein 585A 	ENST00000355533.2|ZNF585A|ENSG00000196967.6|zinc finger protein 585A 	ENST00000356958.4|ZNF585A|ENSG00000196967.6|zinc finger protein 585A
hg19_v2_chr1_+_160147176_160147201	0.0401407	BRCA1	ENST00000470705.1|ATP1A4|ENSG00000132681.12|ATPase, Na+/K+ transporting, alpha 4 polypeptide
hg19_v2_chr4_+_185570767_185570849	0.0328914	BRCA1	ENST00000314970.6|PRIMPOL|ENSG00000164306.6|primase and polymerase (DNA-directed) 	ENST00000515774.1|PRIMPOL|ENSG00000164306.6|primase and polymerase (DNA-directed) 	ENST00000503752.1|PRIMPOL|ENSG00000164306.6|primase and polymerase (DNA-directed)
hg19_v2_chr3_+_185303962_185304021	0.0274961	BRCA1	ENST00000296257.5|SENP2|ENSG00000163904.8|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v2_chrX_-_77150911_77150960	0.0253781	BRCA1	ENST00000373336.3|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr8_-_16859690_16859861	0.0204654	BRCA1	ENST00000180166.5|FGF20|ENSG00000078579.8|fibroblast growth factor 20
hg19_v2_chr6_-_137314371_137314394	0.0126813	BRCA1	ENST00000432330.1|RP11-55K22.5|ENSG00000225391.1|RP11-55K22.5	ENST00000418699.1|RP11-55K22.5|ENSG00000225391.1|RP11-55K22.5
hg19_v2_chr4_-_48782259_48782335	0.0115115	BRCA1	ENST00000507711.1|FRYL|ENSG00000075539.9|FRY-like 	ENST00000358350.4|FRYL|ENSG00000075539.9|FRY-like 	ENST00000537810.1|FRYL|ENSG00000075539.9|FRY-like 	ENST00000264319.7|FRYL|ENSG00000075539.9|FRY-like
hg19_v2_chr18_+_55888767_55888809	0.0107886	BRCA1	ENST00000431212.2|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000586268.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000587190.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr13_+_30002741_30002776	0.00622787	BRCA1	ENST00000380808.2|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chrX_-_77150985_77151090	0.00535401	BRCA1	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr1_+_10271674_10271674	0.00396817	BRCA1	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
