hg19_v2_chr20_-_7921090_7921121	1.92821	CACAGUG	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr4_-_107957454_107957475	0.997176	CACAGUG	ENST00000285311.3|DKK2|ENSG00000155011.4|dickkopf WNT signaling pathway inhibitor 2
hg19_v2_chr20_-_41818373_41818527	0.885542	CACAGUG	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr20_-_50419055_50419066	0.838651	CACAGUG	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr5_-_157002775_157002790	0.800674	CACAGUG	ENST00000257527.4|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr11_-_123525289_123525341	0.776129	CACAGUG	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chrX_+_78426469_78426469	0.748039	CACAGUG	ENST00000276077.1|GPR174|ENSG00000147138.1|G protein-coupled receptor 174
hg19_v2_chr4_+_5053162_5053184	0.66765	CACAGUG	ENST00000282908.5|STK32B|ENSG00000152953.8|serine/threonine kinase 32B
hg19_v2_chr16_+_66878814_66878843	0.618673	CACAGUG	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr2_+_7057523_7057613	0.53642	CACAGUG	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr17_-_50237343_50237373	0.532045	CACAGUG	ENST00000575181.1|CA10|ENSG00000154975.9|carbonic anhydrase X 	ENST00000570565.1|CA10|ENSG00000154975.9|carbonic anhydrase X
hg19_v2_chr15_+_29131103_29131186	0.525005	CACAGUG	ENST00000558402.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2 	ENST00000558330.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2
hg19_v2_chr18_+_49866496_49866548	0.520131	CACAGUG	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr17_-_53499310_53499353	0.501533	CACAGUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr12_+_40787194_40787197	0.495534	CACAGUG	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr22_-_37099555_37099603	0.494323	CACAGUG	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr14_-_59932044_59932114	0.48188	CACAGUG	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr1_-_179198702_179198741	0.470742	CACAGUG	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr12_+_3600356_3600406	0.458542	CACAGUG	ENST00000382622.3|PRMT8|ENSG00000111218.7|protein arginine methyltransferase 8
hg19_v2_chr15_-_82641706_82641706	0.457195	CACAGUG	ENST00000439287.4|GOLGA6L10|ENSG00000205281.6|golgin A6 family-like 10
hg19_v2_chrX_+_64708615_64708615	0.456919	CACAGUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr15_-_82939157_82939157	0.447783	CACAGUG	ENST00000559949.1|RP13-996F3.5|ENSG00000215749.8|golgin A6 family-like 18
hg19_v2_chr11_-_30038490_30038590	0.437613	CACAGUG	ENST00000328224.6|KCNA4|ENSG00000182255.6|potassium voltage-gated channel, shaker-related subfamily, member 4
hg19_v2_chr3_+_139654018_139654039	0.422779	CACAGUG	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr9_+_116638562_116638606	0.421246	CACAGUG	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr3_+_11034403_11034492	0.413572	CACAGUG	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr15_-_83018198_83018198	0.410937	CACAGUG	ENST00000557886.1|RP13-996F3.4|ENSG00000259243.1|golgin A6 family-like 19
hg19_v2_chr19_-_344786_344826	0.405416	CACAGUG	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr6_+_118228657_118228715	0.404952	CACAGUG	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr3_+_36421826_36421844	0.395297	CACAGUG	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chrX_-_54384425_54384495	0.392913	CACAGUG	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr15_-_56209306_56209344	0.388428	CACAGUG	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr5_-_179780312_179780387	0.386878	CACAGUG	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr5_+_156887027_156887059	0.384507	CACAGUG	ENST00000435489.2|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4 	ENST00000311946.7|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4
hg19_v2_chr7_+_6144514_6144614	0.380759	CACAGUG	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr8_-_10697281_10697365	0.367096	CACAGUG	ENST00000524114.1|PINX1|ENSG00000254093.4|PIN2/TERF1 interacting, telomerase inhibitor 1 	ENST00000553390.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7 	ENST00000554914.1|SOX7|ENSG00000258724.1|Transcription factor SOX-7; Uncharacterized protein; cDNA FLJ58508, highly similar to Transcription factor SOX-7
hg19_v2_chr19_+_19322758_19322782	0.358447	CACAGUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr22_+_21271714_21271770	0.355338	CACAGUG	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr7_+_138916231_138916231	0.355129	CACAGUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr9_+_118916082_118916108	0.347614	CACAGUG	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr12_+_54943134_54943182	0.342908	CACAGUG	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chrX_+_150151752_150151762	0.339027	CACAGUG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr4_+_115519577_115519631	0.336394	CACAGUG	ENST00000310836.6|UGT8|ENSG00000174607.6|UDP glycosyltransferase 8
hg19_v2_chr14_-_53619816_53620056	0.331604	CACAGUG	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr16_+_77822427_77822469	0.331074	CACAGUG	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr5_-_1524015_1524108	0.328552	CACAGUG	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr16_-_89007491_89007608	0.327842	CACAGUG	ENST00000327483.5|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000564416.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chrX_-_3631635_3631698	0.327249	CACAGUG	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr14_-_30396948_30396998	0.323658	CACAGUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr8_+_1922024_1922069	0.322939	CACAGUG	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr21_-_44846999_44847017	0.321359	CACAGUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr17_+_1958388_1958404	0.320785	CACAGUG	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr22_-_28197486_28197544	0.320467	CACAGUG	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr22_-_37823468_37823528	0.314418	CACAGUG	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr10_+_70320413_70320413	0.310846	CACAGUG	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr2_-_100721178_100721307	0.304005	CACAGUG	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr20_-_60982330_60982375	0.293243	CACAGUG	ENST00000279101.5|CABLES2|ENSG00000149679.7|Cdk5 and Abl enzyme substrate 2
hg19_v2_chr16_-_4292071_4292088	0.292802	CACAGUG	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr21_+_33245548_33245628	0.28908	CACAGUG	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr1_+_54519242_54519317	0.284022	CACAGUG	ENST00000234827.1|TCEANC2|ENSG00000116205.6|transcription elongation factor A (SII) N-terminal and central domain containing 2
hg19_v2_chrX_+_105066524_105066552	0.270382	CACAGUG	ENST00000243300.9|NRK|ENSG00000123572.12|Nik related kinase 	ENST00000428173.2|NRK|ENSG00000123572.12|Nik related kinase
hg19_v2_chr5_+_14664762_14664868	0.270367	CACAGUG	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr17_+_12569306_12569344	0.266389	CACAGUG	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr12_+_113495492_113495503	0.265242	CACAGUG	ENST00000257600.3|DTX1|ENSG00000135144.3|deltex homolog 1 (Drosophila)
hg19_v2_chr10_+_31608054_31608156	0.259441	CACAGUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr19_+_19496624_19496660	0.258449	CACAGUG	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr7_+_24612935_24612980	0.256171	CACAGUG	ENST00000222644.5|MPP6|ENSG00000105926.11|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
hg19_v2_chr16_-_4588822_4588834	0.254824	CACAGUG	ENST00000564828.1|CDIP1|ENSG00000089486.12|cell death-inducing p53 target 1
hg19_v2_chr8_-_81787006_81787031	0.253967	CACAGUG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr2_-_25142708_25142783	0.250348	CACAGUG	ENST00000260600.5|ADCY3|ENSG00000138031.10|adenylate cyclase 3 	ENST00000435135.1|ADCY3|ENSG00000138031.10|adenylate cyclase 3
hg19_v2_chr12_+_79258547_79258607	0.249969	CACAGUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr19_+_51815102_51815102	0.24751	CACAGUG	ENST00000270642.8|IGLON5|ENSG00000142549.9|IgLON family member 5
hg19_v2_chr8_-_8751068_8751158	0.245885	CACAGUG	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr5_-_139726181_139726216	0.245606	CACAGUG	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr19_+_41222998_41223057	0.243797	CACAGUG	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr1_+_76540386_76540445	0.240149	CACAGUG	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr19_-_7293942_7294045	0.238737	CACAGUG	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr15_+_73344791_73344900	0.235041	CACAGUG	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr19_+_1286097_1286153	0.231979	CACAGUG	ENST00000215368.2|EFNA2|ENSG00000099617.2|ephrin-A2
hg19_v2_chr2_+_192542850_192542872	0.228602	CACAGUG	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr9_+_112403088_112403142	0.224523	CACAGUG	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr15_+_54305101_54305101	0.222383	CACAGUG	ENST00000260323.11|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000545554.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000537900.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr4_-_174451370_174451387	0.221289	CACAGUG	ENST00000359562.4|HAND2|ENSG00000164107.7|heart and neural crest derivatives expressed 2
hg19_v2_chrX_+_16804544_16804613	0.218699	CACAGUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr12_+_54422142_54422239	0.21713	CACAGUG	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr2_-_227664474_227664508	0.215381	CACAGUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr2_+_155554797_155554837	0.214773	CACAGUG	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr18_+_19749386_19749404	0.213641	CACAGUG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr2_+_30454390_30454409	0.212506	CACAGUG	ENST00000395323.3|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000406087.1|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000404397.1|LBH|ENSG00000213626.7|limb bud and heart development
hg19_v2_chr4_-_177713788_177713881	0.212357	CACAGUG	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr1_+_215256467_215256622	0.212222	CACAGUG	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chrX_-_25034065_25034088	0.212095	CACAGUG	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chrX_-_80065146_80065250	0.208153	CACAGUG	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr7_-_31380502_31380515	0.207432	CACAGUG	ENST00000297142.3|NEUROD6|ENSG00000164600.4|neuronal differentiation 6
hg19_v2_chrX_+_49687216_49687265	0.207333	CACAGUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr14_+_72399833_72399952	0.206928	CACAGUG	ENST00000553530.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6 	ENST00000556437.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6
hg19_v2_chr11_+_14665263_14665274	0.206697	CACAGUG	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr4_+_140222609_140222742	0.204724	CACAGUG	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr17_-_46692287_46692317	0.204458	CACAGUG	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr3_-_24536253_24536328	0.203825	CACAGUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr22_-_39239987_39240041	0.203591	CACAGUG	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chr13_+_113622810_113622830	0.202214	CACAGUG	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr12_+_103981044_103981061	0.200812	CACAGUG	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chr18_+_54318616_54318640	0.197287	CACAGUG	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr17_+_47865917_47866068	0.195353	CACAGUG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr7_+_21467642_21467671	0.192943	CACAGUG	ENST00000222584.3|SP4|ENSG00000105866.9|Sp4 transcription factor 	ENST00000432066.2|SP4|ENSG00000105866.9|Sp4 transcription factor
hg19_v2_chr17_-_62658186_62658231	0.191728	CACAGUG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr14_+_56585048_56585150	0.188627	CACAGUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr1_-_154474589_154474589	0.187782	CACAGUG	ENST00000304760.2|SHE|ENSG00000169291.5|Src homology 2 domain containing E
hg19_v2_chr2_-_119605253_119605264	0.187662	CACAGUG	ENST00000295206.6|EN1|ENSG00000163064.6|engrailed homeobox 1
hg19_v2_chr2_-_40679186_40679297	0.187602	CACAGUG	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr6_-_46293378_46293415	0.187366	CACAGUG	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chr5_-_132299313_132299334	0.18517	CACAGUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr3_-_39195037_39195069	0.183977	CACAGUG	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr1_+_203274639_203274664	0.183838	CACAGUG	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr2_-_54087066_54087297	0.182168	CACAGUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr9_-_23821273_23821313	0.182158	CACAGUG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr13_-_103053946_103054124	0.181442	CACAGUG	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr10_-_71930222_71930280	0.181386	CACAGUG	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr3_+_122785895_122786001	0.181111	CACAGUG	ENST00000316218.7|PDIA5|ENSG00000065485.13|protein disulfide isomerase family A, member 5
hg19_v2_chr22_+_39898325_39898382	0.179908	CACAGUG	ENST00000325301.2|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1 	ENST00000404569.1|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1
hg19_v2_chr5_-_111754948_111755013	0.174294	CACAGUG	ENST00000261486.5|EPB41L4A|ENSG00000129595.8|erythrocyte membrane protein band 4.1 like 4A
hg19_v2_chr5_+_152870106_152870188	0.17349	CACAGUG	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr12_+_56137064_56137183	0.173465	CACAGUG	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr3_-_21792838_21792927	0.173109	CACAGUG	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr5_+_65018017_65018088	0.172943	CACAGUG	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr12_-_31744031_31744059	0.17289	CACAGUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr1_+_39456895_39456986	0.17165	CACAGUG	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr2_-_24583168_24583179	0.170748	CACAGUG	ENST00000361999.3|ITSN2|ENSG00000198399.10|intersectin 2
hg19_v2_chr17_-_7232585_7232712	0.170511	CACAGUG	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr21_-_28338732_28338832	0.168338	CACAGUG	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chrX_+_14547632_14547682	0.166328	CACAGUG	ENST00000218075.4|GLRA2|ENSG00000101958.9|glycine receptor, alpha 2
hg19_v2_chr1_+_36396677_36396749	0.16403	CACAGUG	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr11_-_18765389_18765499	0.162152	CACAGUG	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr14_+_101193164_101193241	0.162151	CACAGUG	ENST00000341267.4|DLK1|ENSG00000185559.9|delta-like 1 homolog (Drosophila)
hg19_v2_chr9_-_140196703_140196744	0.161986	CACAGUG	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr9_+_116917807_116917840	0.161348	CACAGUG	ENST00000356083.3|COL27A1|ENSG00000196739.10|collagen, type XXVII, alpha 1
hg19_v2_chr4_+_113970772_113970885	0.16051	CACAGUG	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr5_-_59995921_59996000	0.159745	CACAGUG	ENST00000453022.2|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000545085.1|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000265036.5|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B
hg19_v2_chr1_+_26737253_26737269	0.159737	CACAGUG	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr19_+_50094866_50094927	0.159479	CACAGUG	ENST00000418929.2|PRR12|ENSG00000126464.9|proline rich 12
hg19_v2_chr20_+_10199468_10199516	0.159238	CACAGUG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr1_-_149889382_149889434	0.157716	CACAGUG	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr12_-_77459306_77459365	0.156834	CACAGUG	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr6_-_119399895_119399915	0.155786	CACAGUG	ENST00000338891.7|FAM184A|ENSG00000111879.14|family with sequence similarity 184, member A
hg19_v2_chr2_+_158114051_158114110	0.155505	CACAGUG	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr6_+_136172820_136172846	0.154143	CACAGUG	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr5_+_143584814_143584840	0.153854	CACAGUG	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr16_-_25269134_25269252	0.153509	CACAGUG	ENST00000328086.7|ZKSCAN2|ENSG00000155592.11|zinc finger with KRAB and SCAN domains 2
hg19_v2_chr12_+_70760056_70760085	0.152444	CACAGUG	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr1_-_47697387_47697457	0.152196	CACAGUG	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr21_-_39288743_39288765	0.149045	CACAGUG	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr6_-_107436473_107436543	0.14863	CACAGUG	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chrX_-_129402857_129402880	0.147904	CACAGUG	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr10_+_127408263_127408308	0.147024	CACAGUG	ENST00000337623.3|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr4_-_139163491_139163510	0.144167	CACAGUG	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr9_-_130742792_130742821	0.143859	CACAGUG	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr13_-_107187462_107187462	0.141835	CACAGUG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chrX_+_37430822_37430914	0.140843	CACAGUG	ENST00000378621.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial) 	ENST00000378619.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial)
hg19_v2_chr9_+_129376722_129376748	0.140177	CACAGUG	ENST00000526117.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000373474.4|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000355497.5|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000425646.2|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000561065.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta
hg19_v2_chr14_+_103243813_103243955	0.13932	CACAGUG	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr5_+_132149017_132149073	0.139133	CACAGUG	ENST00000378693.2|SOWAHA|ENSG00000198944.4|sosondowah ankyrin repeat domain family member A
hg19_v2_chr11_-_45687128_45687214	0.138287	CACAGUG	ENST00000308064.2|CHST1|ENSG00000175264.3|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
hg19_v2_chr11_+_12695944_12695989	0.137684	CACAGUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr7_-_30066233_30066332	0.137164	CACAGUG	ENST00000222803.5|FKBP14|ENSG00000106080.6|FK506 binding protein 14, 22 kDa
hg19_v2_chr3_-_178790057_178790072	0.137148	CACAGUG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr4_+_56815102_56815147	0.136837	CACAGUG	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr11_+_120081475_120081488	0.13576	CACAGUG	ENST00000328965.4|OAF|ENSG00000184232.4|OAF homolog (Drosophila)
hg19_v2_chr17_-_8534067_8534088	0.135041	CACAGUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr3_-_87040233_87040257	0.13434	CACAGUG	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr19_+_15218180_15218249	0.133621	CACAGUG	ENST00000342784.2|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000597977.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000600440.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg19_v2_chr13_+_52158610_52158654	0.132479	CACAGUG	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chr19_+_38397839_38397932	0.129162	CACAGUG	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr5_+_138678131_138678169	0.12852	CACAGUG	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr3_+_119187785_119187863	0.128347	CACAGUG	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr12_-_54813229_54813273	0.128053	CACAGUG	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr1_+_70876891_70876917	0.127578	CACAGUG	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr12_-_123450986_123451056	0.127026	CACAGUG	ENST00000344275.7|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000442833.2|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000280560.8|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000540285.1|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000346530.5|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9
hg19_v2_chr17_+_27717415_27717618	0.126113	CACAGUG	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr1_+_117452669_117452748	0.125373	CACAGUG	ENST00000393203.2|PTGFRN|ENSG00000134247.9|prostaglandin F2 receptor inhibitor
hg19_v2_chr9_-_127905736_127905815	0.125133	CACAGUG	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr7_-_27213893_27213954	0.124492	CACAGUG	ENST00000283921.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr8_-_41166953_41167016	0.123597	CACAGUG	ENST00000220772.3|SFRP1|ENSG00000104332.7|secreted frizzled-related protein 1
hg19_v2_chr1_-_35395178_35395265	0.123392	CACAGUG	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr10_-_90712520_90712536	0.121668	CACAGUG	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr3_+_50649302_50649339	0.120746	CACAGUG	ENST00000446044.1|MAPKAPK3|ENSG00000114738.6|mitogen-activated protein kinase-activated protein kinase 3
hg19_v2_chr4_-_13546632_13546674	0.119944	CACAGUG	ENST00000382438.5|NKX3-2|ENSG00000109705.7|NK3 homeobox 2
hg19_v2_chr2_-_11606275_11606289	0.118617	CACAGUG	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr12_+_32112340_32112358	0.11795	CACAGUG	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr19_+_48898132_48898132	0.116964	CACAGUG	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr22_+_46067678_46067771	0.11686	CACAGUG	ENST00000381061.4|ATXN10|ENSG00000130638.11|ataxin 10 	ENST00000252934.5|ATXN10|ENSG00000130638.11|ataxin 10
hg19_v2_chr11_-_74109422_74109518	0.116771	CACAGUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr3_-_171178157_171178225	0.116012	CACAGUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chrX_+_142967173_142967173	0.115824	CACAGUG	ENST00000370494.1|UBE2NL|ENSG00000102069.3|ubiquitin-conjugating enzyme E2N-like
hg19_v2_chr11_-_60674037_60674079	0.115528	CACAGUG	ENST00000541371.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19 	ENST00000227524.4|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr11_-_118661828_118661886	0.115039	CACAGUG	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr16_-_402639_402707	0.114984	CACAGUG	ENST00000262320.3|AXIN1|ENSG00000103126.10|axin 1
hg19_v2_chrX_+_72783026_72783049	0.114691	CACAGUG	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr20_+_48599506_48599536	0.114319	CACAGUG	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr17_+_47572647_47572662	0.112817	CACAGUG	ENST00000172229.3|NGFR|ENSG00000064300.4|nerve growth factor receptor
hg19_v2_chr10_+_112257596_112257634	0.112326	CACAGUG	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chrX_-_40594755_40594809	0.112046	CACAGUG	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr13_-_50367057_50367142	0.111502	CACAGUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr17_+_25799008_25799036	0.108968	CACAGUG	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr12_-_82153087_82153138	0.108484	CACAGUG	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr6_+_126112001_126112062	0.10805	CACAGUG	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr2_-_191399426_191399475	0.105487	CACAGUG	ENST00000409150.3|TMEM194B|ENSG00000189362.7|transmembrane protein 194B
hg19_v2_chr4_-_24914508_24914524	0.10485	CACAGUG	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr1_-_19283163_19283180	0.104815	CACAGUG	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr12_-_105478339_105478361	0.104573	CACAGUG	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr7_+_155250824_155250824	0.104305	CACAGUG	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr16_+_66914264_66914516	0.100292	CACAGUG	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr2_-_206950781_206950947	0.0993813	CACAGUG	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr19_-_17356697_17356762	0.098381	CACAGUG	ENST00000291442.3|NR2F6|ENSG00000160113.5|nuclear receptor subfamily 2, group F, member 6
hg19_v2_chr11_+_33563821_33563877	0.0981885	CACAGUG	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr10_+_81107216_81107237	0.0979105	CACAGUG	ENST00000394579.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F 	ENST00000225174.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F
hg19_v2_chr4_+_6784401_6784510	0.0963169	CACAGUG	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr9_-_135819987_135820020	0.0955875	CACAGUG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr12_-_12419703_12419811	0.0939299	CACAGUG	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr5_-_132073210_132073330	0.0938369	CACAGUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr16_-_47177874_47177922	0.0938185	CACAGUG	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr15_+_41221536_41221591	0.0935006	CACAGUG	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr20_-_10654639_10654694	0.0934201	CACAGUG	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr5_+_82767284_82767310	0.0934105	CACAGUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr4_+_160188889_160188968	0.0929736	CACAGUG	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr13_-_76056250_76056280	0.0921059	CACAGUG	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr11_-_31839488_31839515	0.0913303	CACAGUG	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr11_+_109964087_109964123	0.0912699	CACAGUG	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr5_+_65440032_65440099	0.0907629	CACAGUG	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr17_+_56160768_56160786	0.0903146	CACAGUG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr9_-_107690420_107690518	0.0901691	CACAGUG	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr3_+_150804676_150804697	0.0894988	CACAGUG	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr3_-_124774802_124774852	0.0894501	CACAGUG	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr20_-_14318248_14318264	0.0881042	CACAGUG	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr1_+_199996702_199996732	0.087562	CACAGUG	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr9_+_77112244_77112281	0.0874113	CACAGUG	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr12_-_95611149_95611249	0.0867805	CACAGUG	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr6_-_3457256_3457292	0.0867594	CACAGUG	ENST00000436008.2|SLC22A23|ENSG00000137266.10|solute carrier family 22, member 23
hg19_v2_chr11_-_57004658_57004739	0.086717	CACAGUG	ENST00000606794.1|APLNR|ENSG00000134817.9|apelin receptor
hg19_v2_chr7_-_138666053_138666146	0.0862699	CACAGUG	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr18_-_70535177_70535254	0.0859262	CACAGUG	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr4_+_3076388_3076431	0.0856445	CACAGUG	ENST00000355072.5|HTT|ENSG00000197386.6|huntingtin
hg19_v2_chr8_-_91658303_91658327	0.0856195	CACAGUG	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr17_-_3461092_3461126	0.0847054	CACAGUG	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr5_+_7396141_7396324	0.0841041	CACAGUG	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr7_-_112579869_112579971	0.0838043	CACAGUG	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr10_-_65225722_65225755	0.0831093	CACAGUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr1_-_78444776_78444800	0.0830716	CACAGUG	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr3_+_51575596_51575596	0.0830457	CACAGUG	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chr7_-_127225620_127225679	0.082681	CACAGUG	ENST00000321407.2|GCC1|ENSG00000179562.2|GRIP and coiled-coil domain containing 1
hg19_v2_chr14_-_91526922_91527001	0.0826755	CACAGUG	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr10_+_104474207_104474297	0.0821697	CACAGUG	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr14_-_27066636_27066701	0.0818933	CACAGUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr14_+_71374122_71374193	0.0817379	CACAGUG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr3_-_98620500_98620547	0.0807728	CACAGUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr14_+_37667118_37667192	0.0799297	CACAGUG	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr6_+_114178512_114178586	0.0793454	CACAGUG	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr7_+_45039783_45039821	0.0785444	CACAGUG	ENST00000258781.6|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2 	ENST00000541586.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2 	ENST00000544363.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr5_+_139493665_139493718	0.0784082	CACAGUG	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr5_+_52285144_52285166	0.0775476	CACAGUG	ENST00000296585.5|ITGA2|ENSG00000164171.6|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v2_chr18_-_23670546_23670605	0.077044	CACAGUG	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr12_+_4918342_4918475	0.076554	CACAGUG	ENST00000280684.3|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6 	ENST00000433855.1|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6
hg19_v2_chr11_+_73882144_73882276	0.0765445	CACAGUG	ENST00000328257.8|PPME1|ENSG00000214517.4|protein phosphatase methylesterase 1
hg19_v2_chrX_-_46618490_46618622	0.0764471	CACAGUG	ENST00000328306.4|SLC9A7|ENSG00000065923.5|solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
hg19_v2_chr2_-_27718052_27718127	0.0759403	CACAGUG	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr12_-_109125285_109125372	0.075924	CACAGUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr6_-_33547975_33547999	0.0758282	CACAGUG	ENST00000442998.2|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1 	ENST00000360661.5|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1
hg19_v2_chr9_+_34958254_34958321	0.0756035	CACAGUG	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr20_+_2673383_2673525	0.0752388	CACAGUG	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr1_-_45452240_45452287	0.0752384	CACAGUG	ENST00000372183.3|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000372182.4|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000360403.2|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
hg19_v2_chr20_+_20348740_20348765	0.0752116	CACAGUG	ENST00000310227.1|INSM1|ENSG00000173404.3|insulinoma-associated 1
hg19_v2_chr20_-_48532019_48532045	0.0750066	CACAGUG	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr8_-_74791051_74791145	0.0741547	CACAGUG	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr19_+_45973120_45973171	0.0737769	CACAGUG	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr3_-_113465065_113465147	0.0735649	CACAGUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr4_+_699537_699600	0.0731352	CACAGUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr2_-_43453734_43453751	0.072204	CACAGUG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr17_+_57970469_57970600	0.0721207	CACAGUG	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr18_-_268019_268064	0.0715533	CACAGUG	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr19_-_14629224_14629262	0.0704118	CACAGUG	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr3_+_141205852_141205929	0.0703474	CACAGUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr4_+_52709229_52709345	0.069593	CACAGUG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr4_+_144257915_144258009	0.0694098	CACAGUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_+_41606176_41606265	0.0684178	CACAGUG	ENST00000441667.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000230321.6|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000373050.4|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000446650.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000435476.1|MDFI|ENSG00000112559.9|MyoD family inhibitor
hg19_v2_chr7_-_92219698_92219713	0.0681807	CACAGUG	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr15_+_92396920_92396987	0.068126	CACAGUG	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr9_+_103790991_103791001	0.0668559	CACAGUG	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr2_+_5832799_5832799	0.0649377	CACAGUG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr3_+_67048721_67048760	0.0646103	CACAGUG	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr9_+_129089088_129089163	0.0622328	CACAGUG	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr16_-_73082274_73082274	0.0619808	CACAGUG	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr2_-_39348137_39348212	0.0619763	CACAGUG	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr2_+_210636697_210636763	0.0616262	CACAGUG	ENST00000439458.1|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans) 	ENST00000272845.6|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans)
hg19_v2_chr2_+_196521458_196521491	0.0603398	CACAGUG	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr21_-_39870339_39870443	0.0595023	CACAGUG	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr20_-_48729670_48729694	0.0594717	CACAGUG	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr6_-_42419649_42419789	0.0590154	CACAGUG	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr3_+_47324424_47324447	0.0587834	CACAGUG	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr16_-_71758602_71758604	0.0577723	CACAGUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr17_+_15848231_15848231	0.057185	CACAGUG	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr10_+_43572475_43572527	0.056923	CACAGUG	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr20_+_47662805_47662907	0.0568746	CACAGUG	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr10_-_131762105_131762105	0.0565908	CACAGUG	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr7_+_100210133_100210214	0.0555413	CACAGUG	ENST00000393950.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000424091.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr1_+_46972668_46972669	0.055174	CACAGUG	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr4_-_71532339_71532377	0.0548931	CACAGUG	ENST00000254801.4|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr17_+_54911444_54911564	0.054395	CACAGUG	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr4_+_79697495_79697538	0.0534882	CACAGUG	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr2_-_240322643_240322661	0.0532644	CACAGUG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr12_-_42538657_42538720	0.0531892	CACAGUG	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr1_-_113498943_113498980	0.0531865	CACAGUG	ENST00000369626.3|SLC16A1|ENSG00000155380.7|solute carrier family 16 (monocarboxylate transporter), member 1
hg19_v2_chr3_+_43732362_43732408	0.0531254	CACAGUG	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr12_-_106641728_106641805	0.0530482	CACAGUG	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr7_-_43965937_43966015	0.0526485	CACAGUG	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr1_+_193028552_193028589	0.0525199	CACAGUG	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr2_-_200322723_200322819	0.0520262	CACAGUG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr1_+_101361626_101361698	0.0519709	CACAGUG	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr10_+_94050913_94050965	0.0516625	CACAGUG	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr12_+_83080659_83080693	0.0515957	CACAGUG	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr12_-_49504655_49504686	0.0514032	CACAGUG	ENST00000551782.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like 	ENST00000267102.8|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr10_+_97803151_97803348	0.049845	CACAGUG	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr6_+_44238203_44238222	0.0488075	CACAGUG	ENST00000451188.2|TMEM151B|ENSG00000178233.13|transmembrane protein 151B
hg19_v2_chr20_-_32700075_32700138	0.0481552	CACAGUG	ENST00000374980.2|EIF2S2|ENSG00000125977.6|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg19_v2_chr15_+_81071684_81071719	0.0479453	CACAGUG	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr6_-_48036363_48036425	0.0477086	CACAGUG	ENST00000543600.1|PTCHD4|ENSG00000244694.3|patched domain containing 4 	ENST00000398738.2|PTCHD4|ENSG00000244694.3|patched domain containing 4 	ENST00000339488.4|PTCHD4|ENSG00000244694.3|patched domain containing 4
hg19_v2_chr10_-_113943447_113943536	0.0476948	CACAGUG	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr2_-_128643496_128643496	0.0466517	CACAGUG	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chr6_+_163835669_163835693	0.0464886	CACAGUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr16_-_68482440_68482591	0.0454063	CACAGUG	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr19_+_6361841_6361877	0.0453394	CACAGUG	ENST00000596605.1|CLPP|ENSG00000125656.4|caseinolytic mitochondrial matrix peptidase proteolytic subunit
hg19_v2_chr4_-_22517620_22517712	0.0452003	CACAGUG	ENST00000502482.1|GPR125|ENSG00000152990.9|G protein-coupled receptor 125 	ENST00000334304.5|GPR125|ENSG00000152990.9|G protein-coupled receptor 125
hg19_v2_chr7_-_23053693_23053715	0.0451894	CACAGUG	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr19_-_47249679_47249737	0.0448946	CACAGUG	ENST00000263280.6|STRN4|ENSG00000090372.10|striatin, calmodulin binding protein 4
hg19_v2_chr11_-_117186946_117186981	0.0442914	CACAGUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr2_-_158485387_158485517	0.0425062	CACAGUG	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr17_-_71088797_71088851	0.0422838	CACAGUG	ENST00000580557.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579732.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000578620.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000542342.2|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000255559.3|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579018.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11
hg19_v2_chr1_+_11866207_11866268	0.0419875	CACAGUG	ENST00000312413.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000346436.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr5_+_133861790_133861829	0.0419632	CACAGUG	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr14_+_33408449_33408525	0.0415705	CACAGUG	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr5_-_57756087_57756087	0.0414003	CACAGUG	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr5_+_6714718_6714745	0.0410183	CACAGUG	ENST00000230859.6|PAPD7|ENSG00000112941.8|PAP associated domain containing 7 	ENST00000515721.1|PAPD7|ENSG00000112941.8|PAP associated domain containing 7
hg19_v2_chr7_+_98246588_98246609	0.0409654	CACAGUG	ENST00000265634.3|NPTX2|ENSG00000106236.3|neuronal pentraxin II
hg19_v2_chr1_-_161059380_161059392	0.0407706	CACAGUG	ENST00000368012.3|PVRL4|ENSG00000143217.7|poliovirus receptor-related 4
hg19_v2_chr11_+_109292846_109292875	0.0406374	CACAGUG	ENST00000327419.6|C11orf87|ENSG00000185742.6|chromosome 11 open reading frame 87
hg19_v2_chr16_-_80838195_80838228	0.0403885	CACAGUG	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr12_-_54779511_54779577	0.0401627	CACAGUG	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr12_-_93835665_93835750	0.0398865	CACAGUG	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr9_-_88714421_88714506	0.0398691	CACAGUG	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr4_+_155665123_155665158	0.0395492	CACAGUG	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr18_+_18943554_18943587	0.0392597	CACAGUG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr20_+_24449821_24449843	0.0386593	CACAGUG	ENST00000376862.3|SYNDIG1|ENSG00000101463.5|synapse differentiation inducing 1
hg19_v2_chr15_+_91411810_91411828	0.0386275	CACAGUG	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr17_-_73389737_73389765	0.0384231	CACAGUG	ENST00000392563.1|GRB2|ENSG00000177885.9|growth factor receptor-bound protein 2
hg19_v2_chr15_+_40733387_40733416	0.0378577	CACAGUG	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr6_+_133562472_133562556	0.0378559	CACAGUG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr2_+_85132749_85132788	0.0371969	CACAGUG	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr17_-_36762095_36762212	0.0365545	CACAGUG	ENST00000578925.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1 	ENST00000264659.7|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr17_-_33446820_33446899	0.0364894	CACAGUG	ENST00000592577.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000590016.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000345365.6|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000360276.3|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000357906.3|RAD51D|ENSG00000185379.16|RAD51 paralog D
hg19_v2_chr9_+_109625378_109625458	0.0359186	CACAGUG	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr11_+_9406169_9406210	0.0358774	CACAGUG	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr9_-_136242909_136242953	0.0353881	CACAGUG	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr8_-_127570603_127570648	0.0352902	CACAGUG	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr20_+_34700333_34700348	0.0352608	CACAGUG	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr12_-_124457371_124457387	0.0351848	CACAGUG	ENST00000238156.3|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92 	ENST00000545037.1|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92
hg19_v2_chr20_+_5107420_5107432	0.0350412	CACAGUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chrX_+_154997474_154997474	0.0350286	CACAGUG	ENST00000302805.2|SPRY3|ENSG00000168939.6|sprouty homolog 3 (Drosophila)
hg19_v2_chr19_+_926000_926046	0.0347628	CACAGUG	ENST00000263620.3|ARID3A|ENSG00000116017.6|AT rich interactive domain 3A (BRIGHT-like)
hg19_v2_chr17_+_8924837_8924872	0.0342723	CACAGUG	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr3_-_13461807_13461857	0.0336721	CACAGUG	ENST00000254508.5|NUP210|ENSG00000132182.7|nucleoporin 210kDa
hg19_v2_chr15_-_66545995_66546094	0.033281	CACAGUG	ENST00000395614.1|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11 	ENST00000288745.3|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11 	ENST00000422354.1|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11 	ENST00000395625.2|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11 	ENST00000360698.4|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11 	ENST00000409699.2|MEGF11|ENSG00000157890.13|multiple EGF-like-domains 11
hg19_v2_chr1_-_217804377_217804446	0.0332115	CACAGUG	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr17_+_35294075_35294102	0.0329165	CACAGUG	ENST00000254457.5|LHX1|ENSG00000132130.7|LIM homeobox 1
hg19_v2_chr1_+_32573636_32573673	0.0327548	CACAGUG	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr7_-_103848405_103848495	0.0325033	CACAGUG	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr12_+_132379160_132379201	0.0319135	CACAGUG	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr10_+_46997926_46997926	0.0318001	CACAGUG	ENST00000374314.4|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr19_-_50143452_50143468	0.0316812	CACAGUG	ENST00000246792.3|RRAS|ENSG00000126458.3|related RAS viral (r-ras) oncogene homolog
hg19_v2_chr2_+_171673072_171673225	0.0310439	CACAGUG	ENST00000358196.3|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa) 	ENST00000375272.1|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa)
hg19_v2_chr8_-_141645645_141645783	0.0305169	CACAGUG	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr7_-_127032741_127032777	0.0302437	CACAGUG	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr12_+_72056773_72056796	0.0295761	CACAGUG	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr6_-_33160231_33160276	0.0292767	CACAGUG	ENST00000395194.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000457788.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000341947.2|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000357486.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374714.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374713.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000395197.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374712.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000361917.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374708.4|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2
hg19_v2_chr1_+_64239657_64239724	0.02904	CACAGUG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr5_+_109025067_109025146	0.0287749	CACAGUG	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr8_+_134203273_134203289	0.028399	CACAGUG	ENST00000250160.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr9_+_131549483_131549606	0.0278992	CACAGUG	ENST00000372648.5|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13 	ENST00000539497.1|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr8_-_119634141_119634234	0.0277785	CACAGUG	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr9_-_100395756_100395962	0.0271334	CACAGUG	ENST00000341170.4|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENST00000354801.2|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
hg19_v2_chr2_-_69614373_69614397	0.024974	CACAGUG	ENST00000361060.5|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1 	ENST00000357308.4|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1
hg19_v2_chr11_+_12308447_12308447	0.0248946	CACAGUG	ENST00000256186.2|MICALCL|ENSG00000133808.4|MICAL C-terminal like
hg19_v2_chr7_+_140774032_140774032	0.0246338	CACAGUG	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr2_+_27070964_27071027	0.0241617	CACAGUG	ENST00000288699.6|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr17_-_7518145_7518234	0.0232584	CACAGUG	ENST00000250113.7|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2 	ENST00000571597.1|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2
hg19_v2_chr7_-_71801980_71802013	0.0227276	CACAGUG	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr3_+_107241783_107241850	0.02255	CACAGUG	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr11_+_66234216_66234424	0.0221796	CACAGUG	ENST00000349459.6|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000320740.7|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000524466.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000526296.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3
hg19_v2_chr8_-_10588010_10588030	0.0219507	CACAGUG	ENST00000304501.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7
hg19_v2_chr20_-_50384864_50384943	0.0215343	CACAGUG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr2_-_20212422_20212455	0.0207153	CACAGUG	ENST00000421259.2|MATN3|ENSG00000132031.8|matrilin 3 	ENST00000407540.3|MATN3|ENSG00000132031.8|matrilin 3
hg19_v2_chr17_-_79885576_79885624	0.020555	CACAGUG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr1_+_97187318_97187380	0.02037	CACAGUG	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr17_-_4167142_4167281	0.0199428	CACAGUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr20_-_61569227_61569287	0.0195804	CACAGUG	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr3_-_52931557_52931623	0.0191969	CACAGUG	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr11_+_63580855_63580889	0.0191789	CACAGUG	ENST00000294244.4|C11orf84|ENSG00000168005.4|chromosome 11 open reading frame 84
hg19_v2_chr5_+_172483347_172483407	0.0190093	CACAGUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr11_+_118307179_118307228	0.0189355	CACAGUG	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr8_-_67525473_67525518	0.0187338	CACAGUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr1_+_65613217_65613331	0.0185114	CACAGUG	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr3_-_53381539_53381654	0.0182228	CACAGUG	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr6_-_166075557_166075588	0.0181185	CACAGUG	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr15_-_65282274_65282281	0.0180884	CACAGUG	ENST00000204566.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr17_-_56084578_56084707	0.0172975	CACAGUG	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr15_+_76352178_76352306	0.0172954	CACAGUG	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr6_+_149068464_149068559	0.0172171	CACAGUG	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr6_-_146135880_146135952	0.01701	CACAGUG	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr16_-_75498553_75498635	0.0166481	CACAGUG	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr1_-_71513471_71513506	0.0166431	CACAGUG	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr8_+_22437965_22438003	0.0162276	CACAGUG	ENST00000409141.1|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000265810.4|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr12_+_133066137_133066137	0.015954	CACAGUG	ENST00000434748.2|FBRSL1|ENSG00000112787.8|fibrosin-like 1
hg19_v2_chr5_+_172068232_172068320	0.0158178	CACAGUG	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr3_-_116164306_116164380	0.0156722	CACAGUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr1_-_37499726_37499850	0.0156298	CACAGUG	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr14_-_100070363_100070467	0.0155466	CACAGUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr17_-_47492236_47492251	0.0154697	CACAGUG	ENST00000434917.2|PHB|ENSG00000167085.7|prohibitin 	ENST00000300408.3|PHB|ENSG00000167085.7|prohibitin 	ENST00000511832.1|PHB|ENSG00000167085.7|prohibitin 	ENST00000419140.2|PHB|ENSG00000167085.7|prohibitin
hg19_v2_chr7_-_27183263_27183287	0.0154277	CACAGUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr2_+_228336849_228336904	0.0153354	CACAGUG	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr2_+_105471969_105471969	0.0152478	CACAGUG	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr17_+_45608430_45608490	0.0150596	CACAGUG	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr2_+_238875597_238875724	0.0145293	CACAGUG	ENST00000272930.4|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000448502.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000416292.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409633.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000414443.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409953.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409332.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr1_-_33502441_33502500	0.0143963	CACAGUG	ENST00000548033.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000487289.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000373449.2|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000480134.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000467905.1|AK2|ENSG00000004455.12|adenylate kinase 2
hg19_v2_chr17_+_32907768_32907768	0.0134451	CACAGUG	ENST00000321639.5|TMEM132E|ENSG00000181291.5|transmembrane protein 132E
hg19_v2_chr6_+_13925098_13925163	0.0134231	CACAGUG	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr2_-_50574856_50574892	0.0132599	CACAGUG	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr15_-_37390482_37390572	0.013176	CACAGUG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr20_+_62496596_62496655	0.0124108	CACAGUG	ENST00000369927.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000346249.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000348257.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000352482.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000351424.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000217121.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000358548.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2
hg19_v2_chr4_-_153457197_153457268	0.0119372	CACAGUG	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chrX_+_117629766_117629872	0.0117006	CACAGUG	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr18_-_29522989_29523104	0.011401	CACAGUG	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr5_+_179921430_179921461	0.0105075	CACAGUG	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr1_-_235491462_235491534	0.0103181	CACAGUG	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr4_-_140477928_140477990	0.0100086	CACAGUG	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr2_+_108443388_108443393	0.00995623	CACAGUG	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chrX_+_102631248_102631335	0.00968196	CACAGUG	ENST00000361298.4|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372645.3|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372635.1|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1
hg19_v2_chr8_-_42698433_42698486	0.00944587	CACAGUG	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr4_-_90229142_90229217	0.00911523	CACAGUG	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr17_-_37607497_37607539	0.00882651	CACAGUG	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr3_+_37903432_37903475	0.00868279	CACAGUG	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr1_-_85725316_85725367	0.00865979	CACAGUG	ENST00000344356.5|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52 	ENST00000471115.1|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52
hg19_v2_chr17_+_25621102_25621157	0.00798034	CACAGUG	ENST00000581440.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000262394.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583742.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000579733.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583193.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000581185.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000427287.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000348811.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1
hg19_v2_chr20_-_48770174_48770243	0.00759476	CACAGUG	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr4_+_39699664_39699772	0.00730869	CACAGUG	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr10_+_21823079_21823102	0.00720695	CACAGUG	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr1_+_167190066_167190156	0.00716842	CACAGUG	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr9_-_101471479_101471522	0.00659158	CACAGUG	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr14_-_92572894_92572965	0.00640531	CACAGUG	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr12_+_48516357_48516436	0.00627547	CACAGUG	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr17_+_61627814_61627871	0.00606944	CACAGUG	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr1_-_117210290_117210376	0.00602066	CACAGUG	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr12_-_90049828_90049847	0.00575815	CACAGUG	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr16_-_1464688_1464752	0.00565073	CACAGUG	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr16_-_65155833_65155976	0.00539632	CACAGUG	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chrX_-_70288234_70288291	0.00537914	CACAGUG	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr5_+_149887672_149887698	0.00498734	CACAGUG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr16_-_2264779_2264847	0.00477795	CACAGUG	ENST00000333503.7|PGP|ENSG00000184207.8|phosphoglycolate phosphatase
hg19_v2_chr2_-_151344172_151344243	0.00459329	CACAGUG	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr20_-_30795511_30795594	0.00449217	CACAGUG	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr17_+_45727204_45727220	0.00446051	CACAGUG	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chrX_+_100474711_100474758	0.00423085	CACAGUG	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr17_+_72983674_72983768	0.00410686	CACAGUG	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr22_-_22221900_22221970	0.00394792	CACAGUG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr1_+_23037323_23037463	0.00376936	CACAGUG	ENST00000544305.1|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374630.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000400191.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374632.3|EPHB2|ENSG00000133216.12|EPH receptor B2
hg19_v2_chr8_-_68255912_68255952	0.00374601	CACAGUG	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr2_+_54683419_54683442	0.00340909	CACAGUG	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr10_-_46030841_46030846	0.0032072	CACAGUG	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr14_-_23526739_23526766	0.00314204	CACAGUG	ENST00000397359.3|CDH24|ENSG00000139880.15|cadherin 24, type 2 	ENST00000487137.2|CDH24|ENSG00000139880.15|cadherin 24, type 2
hg19_v2_chr16_-_12009735_12009793	0.002513	CACAGUG	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr15_-_72490114_72490145	0.00246627	CACAGUG	ENST00000309731.7|GRAMD2|ENSG00000175318.7|GRAM domain containing 2
hg19_v2_chr12_-_31945172_31945178	0.00244707	CACAGUG	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr11_-_108093329_108093375	0.00239021	CACAGUG	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr7_+_66386204_66386249	0.00236795	CACAGUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr2_+_170440844_170440897	0.00194295	CACAGUG	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr10_+_82213904_82213922	0.00190122	CACAGUG	ENST00000429989.3|TSPAN14|ENSG00000108219.10|tetraspanin 14
hg19_v2_chr14_+_51338816_51338878	0.00182953	CACAGUG	ENST00000353130.1|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B 	ENST00000337334.2|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B 	ENST00000395752.1|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B
hg19_v2_chr17_+_37026106_37026123	0.00153947	CACAGUG	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr7_-_27205136_27205164	0.000130854	CACAGUG	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
