hg19_v1_chr2_-_238322840_238322849	1.7345	MSX1,2.p2	NM_004369|COL6A3|1293|collagen, type VI, alpha 3	NM_057164|COL6A3|1293|collagen, type VI, alpha 3	NM_057165|COL6A3|1293|collagen, type VI, alpha 3	NM_057166|COL6A3|1293|collagen, type VI, alpha 3	NM_057167|COL6A3|1293|collagen, type VI, alpha 3
hg19_v1_chr2_-_238322815_238322828	1.71861	MSX1,2.p2	X52022|COL6A3|1293|collagen, type VI, alpha 3
hg19_v1_chr2_-_238322770_238322800	1.59684	MSX1,2.p2	AK092021|COL6A3|1293|collagen, type VI, alpha 3	AK304870|COL6A3|1293|collagen, type VI, alpha 3	BC144595|COL6A3|1293|collagen, type VI, alpha 3	BC150625|COL6A3|1293|collagen, type VI, alpha 3	BC171790|COL6A3|1293|collagen, type VI, alpha 3
hg19_v1_chr13_+_102104941_102105049	1.35616	MSX1,2.p2	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v1_chr9_+_120466607_120466621	1.16718	MSX1,2.p2	AK293068|TLR4|7099|toll-like receptor 4	AK303730|TLR4|7099|toll-like receptor 4
hg19_v1_chr11_+_15133969_15133969	1.01377	MSX1,2.p2	AB236159|INSC|387755|inscuteable homolog (Drosophila)	NM_001031853|INSC|387755|inscuteable homolog (Drosophila)
hg19_v1_chr3_+_69812620_69812706	0.78114	MSX1,2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr3_+_69812961_69812961	0.75209	MSX1,2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr9_+_120466625_120466750	0.575313	MSX1,2.p2	U93091|TLR4|7099|toll-like receptor 4	BC025294|TLR4|7099|toll-like receptor 4	AK226155|TLR4|7099|toll-like receptor 4	U88880|TLR4|7099|toll-like receptor 4	BC117422|TLR4|7099|toll-like receptor 4	BC143841|TLR4|7099|toll-like receptor 4	AB445638|TLR4|7099|toll-like receptor 4
hg19_v1_chr2_-_192711923_192712020	0.560065	MSX1,2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr4_-_156787377_156787424	0.511075	MSX1,2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg19_v1_chrX_+_16964730_16965135	0.444507	MSX1,2.p2	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2	AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2	AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2
hg19_v1_chr2_-_192711651_192711826	0.435244	MSX1,2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chr17_-_66951381_66951532	0.398684	MSX1,2.p2	BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v1_chrX_+_66788682_66788682	0.391092	MSX1,2.p2	NM_001011645|AR|367|androgen receptor
hg19_v1_chr2_-_145277879_145277964	0.385239	MSX1,2.p2	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2	AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2
hg19_v1_chr7_-_14025826_14026138	0.383748	MSX1,2.p2	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg19_v1_chr5_+_59784004_59784077	0.378278	MSX1,2.p2	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v1_chr17_-_19651586_19651745	0.365593	MSX1,2.p2	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1
hg19_v1_chr10_+_124320180_124320272	0.35194	MSX1,2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg19_v1_chr5_+_140810181_140810205	0.321796	MSX1,2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr4_-_159092509_159092534	0.302143	MSX1,2.p2	AL834177|FAM198B|51313|family with sequence similarity 198, member B	AM392540|FAM198B|51313|family with sequence similarity 198, member B	AM392704|FAM198B|51313|family with sequence similarity 198, member B
hg19_v1_chr1_-_241799101_241799231	0.299403	MSX1,2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr12_+_71833518_71833582	0.279388	MSX1,2.p2	AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5	AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5
hg19_v1_chr3_-_151102536_151102553	0.277422	MSX1,2.p2	AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg19_v1_chr11_-_27681195_27681195	0.269258	MSX1,2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr5_+_140810126_140810168	0.267817	MSX1,2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr1_+_78470593_78470635	0.265972	MSX1,2.p2	U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v1_chr12_+_32654976_32655103	0.251697	MSX1,2.p2	BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4
hg19_v1_chr3_+_12392993_12393131	0.250144	MSX1,2.p2	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma	U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma	U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma	AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg19_v1_chr5_+_140529619_140529838	0.244541	MSX1,2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr9_-_21482311_21482311	0.244337	MSX1,2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg19_v1_chr17_-_15168590_15168647	0.243978	MSX1,2.p2	BC091499|PMP22|5376|peripheral myelin protein 22	D11428|PMP22|5376|peripheral myelin protein 22	NM_000304|PMP22|5376|peripheral myelin protein 22
hg19_v1_chr3_-_195310985_195311075	0.2396	MSX1,2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chrX_-_135863033_135863074	0.226348	MSX1,2.p2	D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v1_chr3_+_45067750_45067854	0.221585	MSX1,2.p2	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B	NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B	X64559|CLEC3B|7123|C-type lectin domain family 3, member B	BC011024|CLEC3B|7123|C-type lectin domain family 3, member B	CR541981|CLEC3B|7123|C-type lectin domain family 3, member B	CR542009|CLEC3B|7123|C-type lectin domain family 3, member B
hg19_v1_chr14_+_101295409_101295525	0.218189	MSX1,2.p2	AF052114|MEG3|55384|maternally expressed 3 (non-protein coding)
hg19_v1_chrX_-_62975005_62975030	0.212819	MSX1,2.p2	NM_001173480|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	NM_015185|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v1_chr7_+_120629444_120629444	0.198424	MSX1,2.p2	NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr5_-_160279045_160279218	0.197512	MSX1,2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg19_v1_chr2_-_175499275_175499319	0.192894	MSX1,2.p2	AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1	NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg19_v1_chr5_+_15500288_15500310	0.184309	MSX1,2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr1_+_153190059_153190059	0.182662	MSX1,2.p2	NM_001195571|PRR9|574414|proline rich 9
hg19_v1_chr6_+_16129321_16129553	0.179854	MSX1,2.p2	BC002860|MYLIP|29116|myosin regulatory light chain interacting protein	AF258586|MYLIP|29116|myosin regulatory light chain interacting protein	AF187016|MYLIP|29116|myosin regulatory light chain interacting protein	AF006003|MYLIP|29116|myosin regulatory light chain interacting protein	AF212221|MYLIP|29116|myosin regulatory light chain interacting protein	EU176184|MYLIP|29116|myosin regulatory light chain interacting protein	BT007055|MYLIP|29116|myosin regulatory light chain interacting protein
hg19_v1_chr9_-_116840551_116840587	0.179393	MSX1,2.p2	X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor	AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg19_v1_chr1_-_86043932_86044049	0.175408	MSX1,2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr6_+_16129285_16129320	0.164904	MSX1,2.p2	AK074391|MYLIP|29116|myosin regulatory light chain interacting protein	AK314648|MYLIP|29116|myosin regulatory light chain interacting protein	NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein
hg19_v1_chr12_-_105627182_105627182	0.159298	MSX1,2.p2	NM_001251905|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
hg19_v1_chr4_+_71062241_71062243	0.157199	MSX1,2.p2	EF113908|ODAM|54959|odontogenic, ameloblast asssociated	NM_017855|ODAM|54959|odontogenic, ameloblast asssociated
hg19_v1_chr11_-_40315663_40315663	0.157001	MSX1,2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg19_v1_chr20_+_123230_123275	0.156934	MSX1,2.p2	AK225987|DEFB126|81623|defensin, beta 126	AJ236910|DEFB126|81623|defensin, beta 126	BC069294|DEFB126|81623|defensin, beta 126	NM_030931|DEFB126|81623|defensin, beta 126	AF525928|DEFB126|81623|defensin, beta 126	AY122478|DEFB126|81623|defensin, beta 126
hg19_v1_chr1_-_104239071_104239072	0.15603	MSX1,2.p2	AK292341|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chrX_-_19688991_19689121	0.153218	MSX1,2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg19_v1_chr19_-_14169970_14169970	0.150892	MSX1,2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg19_v1_chr3_-_149095458_149095486	0.150523	MSX1,2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr2_+_65216482_65216500	0.142971	MSX1,2.p2	AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v1_chr19_+_50016500_50016537	0.141084	MSX1,2.p2	U12255|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha
hg19_v1_chr9_+_18474078_18474098	0.139579	MSX1,2.p2	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1
hg19_v1_chr7_-_23509972_23510024	0.139107	MSX1,2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg19_v1_chr3_-_149095517_149095567	0.138389	MSX1,2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr1_+_104198140_104198141	0.132806	MSX1,2.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr5_+_139876504_139876626	0.131208	MSX1,2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg19_v1_chr5_+_140718353_140718538	0.130134	MSX1,2.p2	NM_018915|PCDHGA2|56113|protocadherin gamma subfamily A, 2	NM_032009|PCDHGA2|56113|protocadherin gamma subfamily A, 2	BC093871|PCDHGA2|56113|protocadherin gamma subfamily A, 2	BC104950|PCDHGA2|56113|protocadherin gamma subfamily A, 2	AF152322|PCDHGA2|56113|protocadherin gamma subfamily A, 2	AF152508|PCDHGA2|56113|protocadherin gamma subfamily A, 2
hg19_v1_chr17_-_78450247_78450408	0.128452	MSX1,2.p2	EU831771|NPTX1|4884|neuronal pentraxin I	EU831849|NPTX1|4884|neuronal pentraxin I	BC089441|NPTX1|4884|neuronal pentraxin I	U61849|NPTX1|4884|neuronal pentraxin I	AK127335|NPTX1|4884|neuronal pentraxin I	NM_002522|NPTX1|4884|neuronal pentraxin I
hg19_v1_chr9_-_116840460_116840541	0.127091	MSX1,2.p2	X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg19_v1_chr11_+_131240370_131240568	0.125858	MSX1,2.p2	NM_001048209|NTM|50863|neurotrimin	AK315964|NTM|50863|neurotrimin	AK293487|NTM|50863|neurotrimin	AY358331|NTM|50863|neurotrimin
hg19_v1_chr4_+_113970784_113970884	0.124583	MSX1,2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr20_+_43850009_43850030	0.12078	MSX1,2.p2	BC005262|SEMG2|6407|semenogelin II	M81652|SEMG2|6407|semenogelin II	NM_003008|SEMG2|6407|semenogelin II	AK312932|SEMG2|6407|semenogelin II	BC056675|SEMG2|6407|semenogelin II	BC070306|SEMG2|6407|semenogelin II
hg19_v1_chr1_+_145487301_145487445	0.120086	MSX1,2.p2	CR627381|LIX1L|128077|Lix1 homolog (mouse)-like
hg19_v1_chr3_+_69915374_69915429	0.119817	MSX1,2.p2	NM_198177|MITF|4286|microphthalmia-associated transcription factor	AB006989|MITF|4286|microphthalmia-associated transcription factor	AK297858|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr7_-_135613197_135613244	0.118249	MSX1,2.p2	AF130088|LUZP6|767558|leucine zipper protein 6
hg19_v1_chr3_+_9944295_9944352	0.113026	MSX1,2.p2	NM_153483|IL17RE|132014|interleukin 17 receptor E	BC035478|IL17RE|132014|interleukin 17 receptor E	BC137077|IL17RE|132014|interleukin 17 receptor E	BC137078|IL17RE|132014|interleukin 17 receptor E
hg19_v1_chr2_-_163099877_163100044	0.111465	MSX1,2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg19_v1_chr9_+_111624545_111624602	0.110889	MSX1,2.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg19_v1_chr3_+_9944511_9944578	0.109967	MSX1,2.p2	AF458069|IL17RE|132014|interleukin 17 receptor E	AY358451|IL17RE|132014|interleukin 17 receptor E	NM_001193380|IL17RE|132014|interleukin 17 receptor E	NM_153480|IL17RE|132014|interleukin 17 receptor E	BC063110|IL17RE|132014|interleukin 17 receptor E	AK074238|IL17RE|132014|interleukin 17 receptor E	AK096801|IL17RE|132014|interleukin 17 receptor E	AK298025|IL17RE|132014|interleukin 17 receptor E	AK096793|IL17RE|132014|interleukin 17 receptor E	AK314476|IL17RE|132014|interleukin 17 receptor E	AK297697|IL17RE|132014|interleukin 17 receptor E
hg19_v1_chr1_-_150978879_150979384	0.109627	MSX1,2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg19_v1_chr17_-_42908178_42908178	0.108885	MSX1,2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg19_v1_chr12_-_53171104_53171128	0.108405	MSX1,2.p2	M99063|KRT76|51350|keratin 76	AK299390|KRT76|51350|keratin 76	NM_015848|KRT76|51350|keratin 76
hg19_v1_chr5_+_126859157_126859232	0.108074	MSX1,2.p2	AK090486|PRRC1|133619|proline-rich coiled-coil 1	EU831910|PRRC1|133619|proline-rich coiled-coil 1	EU832004|PRRC1|133619|proline-rich coiled-coil 1
hg19_v1_chr12_+_51318743_51318859	0.107314	MSX1,2.p2	AY358797|METTL7A|25840|methyltransferase like 7A	AK024409|METTL7A|25840|methyltransferase like 7A	AK307071|METTL7A|25840|methyltransferase like 7A	AK225689|METTL7A|25840|methyltransferase like 7A	AK225595|METTL7A|25840|methyltransferase like 7A	AK023693|METTL7A|25840|methyltransferase like 7A	AK293356|METTL7A|25840|methyltransferase like 7A	AJ536233|METTL7A|25840|methyltransferase like 7A	BC008180|METTL7A|25840|methyltransferase like 7A	BC004492|METTL7A|25840|methyltransferase like 7A	EU832657|METTL7A|25840|methyltransferase like 7A	EU832734|METTL7A|25840|methyltransferase like 7A	AL050159|METTL7A|25840|methyltransferase like 7A	AF113007|METTL7A|25840|methyltransferase like 7A
hg19_v1_chrX_-_62974987_62975004	0.102051	MSX1,2.p2	BC018106|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	BC043497|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	AB007884|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v1_chr19_-_7698569_7698633	0.101212	MSX1,2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg19_v1_chr14_-_105259937_105259937	0.099163	MSX1,2.p2	BX648205|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_005163|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr2_-_105467912_105467920	0.0971455	MSX1,2.p2	AK096498|LOC100506421|100506421|uncharacterized LOC100506421
hg19_v1_chr7_-_108142934_108143010	0.0966339	MSX1,2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg19_v1_chr19_+_49376488_49376490	0.092437	MSX1,2.p2	DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A	EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A	CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A
hg19_v1_chr3_-_71180061_71180097	0.0917821	MSX1,2.p2	NM_001244815|FOXP1|27086|forkhead box P1
hg19_v1_chr5_-_59783885_59783924	0.0904389	MSX1,2.p2	AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr5_-_138210992_138211035	0.0903031	MSX1,2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr11_+_117070039_117070119	0.0887164	MSX1,2.p2	NM_001001522|TAGLN|6876|transgelin	NM_003186|TAGLN|6876|transgelin	AK223002|TAGLN|6876|transgelin	M95787|TAGLN|6876|transgelin	AK314043|TAGLN|6876|transgelin	BC010946|TAGLN|6876|transgelin	BC093050|TAGLN|6876|transgelin	BC004927|TAGLN|6876|transgelin	D17409|TAGLN|6876|transgelin
hg19_v1_chr6_+_87969619_87969709	0.0864624	MSX1,2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg19_v1_chr3_-_149095333_149095399	0.085202	MSX1,2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chrX_-_135863104_135863115	0.0848547	MSX1,2.p2	BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v1_chr5_+_140734767_140734767	0.0847809	MSX1,2.p2	AF152324|PCDHGA4|56111|protocadherin gamma subfamily A, 4	AF152511|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_018917|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_032053|PCDHGA4|56111|protocadherin gamma subfamily A, 4
hg19_v1_chr20_-_34543280_34543280	0.0832392	MSX1,2.p2	NM_016558|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr5_+_43602738_43602941	0.0830628	MSX1,2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg19_v1_chr5_-_138211054_138211064	0.0825722	MSX1,2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr14_-_73453651_73453663	0.0825088	MSX1,2.p2	AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg19_v1_chr17_-_15554809_15554966	0.0823484	MSX1,2.p2	BC001564|TRIM16|10626|tripartite motif containing 16	CR457136|TRIM16|10626|tripartite motif containing 16	EU446937|TRIM16|10626|tripartite motif containing 16	HQ257965|TRIM16|10626|tripartite motif containing 16	AK002035|TRIM16|10626|tripartite motif containing 16	AK314557|TRIM16|10626|tripartite motif containing 16
hg19_v1_chr15_-_43594452_43594452	0.0817906	MSX1,2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg19_v1_chr2_-_175462428_175462535	0.0807951	MSX1,2.p2	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1	X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg19_v1_chr3_+_187943192_187943276	0.0797848	MSX1,2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr15_+_91769329_91769493	0.079521	MSX1,2.p2	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B	CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B	DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B	EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B
hg19_v1_chr9_-_116840604_116840670	0.0789368	MSX1,2.p2	AK310791|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg19_v1_chr3_-_149095413_149095452	0.0776768	MSX1,2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr1_+_201751757_201751814	0.0765087	MSX1,2.p2	AB033039|NAV1|89796|neuron navigator 1
hg19_v1_chr7_+_90338711_90338855	0.075805	MSX1,2.p2	AB020641|CDK14|5218|cyclin-dependent kinase 14	BC152436|CDK14|5218|cyclin-dependent kinase 14	BC167152|CDK14|5218|cyclin-dependent kinase 14	BC167156|CDK14|5218|cyclin-dependent kinase 14	NM_012395|CDK14|5218|cyclin-dependent kinase 14	BC136477|CDK14|5218|cyclin-dependent kinase 14	AK289782|CDK14|5218|cyclin-dependent kinase 14	BC152388|CDK14|5218|cyclin-dependent kinase 14
hg19_v1_chr3_-_99833348_99833356	0.0757032	MSX1,2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr12_-_13248581_13248739	0.0737154	MSX1,2.p2	AK075311|GSG1|83445|germ cell associated 1	AY358513|GSG1|83445|germ cell associated 1	BC112896|GSG1|83445|germ cell associated 1	AK075288|GSG1|83445|germ cell associated 1	AK075322|GSG1|83445|germ cell associated 1	AB593019|GSG1|83445|germ cell associated 1	AB593020|GSG1|83445|germ cell associated 1	BC001796|GSG1|83445|germ cell associated 1	AK027894|GSG1|83445|germ cell associated 1	NM_001206843|GSG1|83445|germ cell associated 1	NM_001206845|GSG1|83445|germ cell associated 1	NM_031289|GSG1|83445|germ cell associated 1	NM_153823|GSG1|83445|germ cell associated 1
hg19_v1_chr1_-_19217384_19217384	0.0731004	MSX1,2.p2	AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1
hg19_v1_chr3_+_183894736_183894836	0.0729809	MSX1,2.p2	U36188|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	DQ892876|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	DQ895915|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	BT007308|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit
hg19_v1_chr3_+_8543539_8543624	0.0714779	MSX1,2.p2	AK294455|LMCD1|29995|LIM and cysteine-rich domains 1	AK293849|LMCD1|29995|LIM and cysteine-rich domains 1	AF216709|LMCD1|29995|LIM and cysteine-rich domains 1	DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1	DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1
hg19_v1_chr2_+_61389628_61389628	0.0712883	MSX1,2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg19_v1_chr5_+_140749830_140749961	0.0710833	MSX1,2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr22_+_35462125_35462173	0.0708609	MSX1,2.p2	CR749372|ISX|91464|intestine-specific homeobox	AK025181|ISX|91464|intestine-specific homeobox	NM_001008494|ISX|91464|intestine-specific homeobox
hg19_v1_chr20_-_45976626_45976669	0.0699843	MSX1,2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr2_+_113825546_113825558	0.0695999	MSX1,2.p2	AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)	NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)	AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)
hg19_v1_chr17_+_65936590_65936678	0.0690833	MSX1,2.p2	AK027184|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr17_-_9929567_9929675	0.0688017	MSX1,2.p2	AB007854|GAS7|8522|growth arrest-specific 7	AK225165|GAS7|8522|growth arrest-specific 7	AK299574|GAS7|8522|growth arrest-specific 7	NM_001130831|GAS7|8522|growth arrest-specific 7
hg19_v1_chr1_-_149900143_149900235	0.0687823	MSX1,2.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chrX_-_19988381_19988381	0.0685076	MSX1,2.p2	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg19_v1_chr4_+_106473776_106473788	0.0676656	MSX1,2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg19_v1_chr11_-_71746966_71746988	0.0668565	MSX1,2.p2	
hg19_v1_chr5_+_140809957_140810084	0.0661537	MSX1,2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr15_+_99645152_99645329	0.0659514	MSX1,2.p2	BC151243|SYNM|23336|synemin, intermediate filament protein	AB002351|SYNM|23336|synemin, intermediate filament protein	AJ310521|SYNM|23336|synemin, intermediate filament protein	AJ310522|SYNM|23336|synemin, intermediate filament protein	AJ697971|SYNM|23336|synemin, intermediate filament protein	NM_015286|SYNM|23336|synemin, intermediate filament protein	NM_145728|SYNM|23336|synemin, intermediate filament protein	AF359284|SYNM|23336|synemin, intermediate filament protein
hg19_v1_chr16_-_73092533_73092640	0.0658871	MSX1,2.p2	D10250|ZFHX3|463|zinc finger homeobox 3	NM_001164766|ZFHX3|463|zinc finger homeobox 3
hg19_v1_chr12_+_1017011_1017153	0.0652152	MSX1,2.p2	BC013629|WNK1|65125|WNK lysine deficient protein kinase 1
hg19_v1_chr9_+_134305476_134305488	0.0652036	MSX1,2.p2	NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B
hg19_v1_chr12_+_54891539_54891545	0.0651155	MSX1,2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr6_+_147527102_147527118	0.0641331	MSX1,2.p2	AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)
hg19_v1_chr10_-_13749622_13749756	0.0637306	MSX1,2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg19_v1_chr12_-_71551564_71551619	0.0625445	MSX1,2.p2	AK223022|TSPAN8|7103|tetraspanin 8	AK313112|TSPAN8|7103|tetraspanin 8
hg19_v1_chr8_-_27115897_27115927	0.0621361	MSX1,2.p2	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg19_v1_chr18_+_3594056_3594228	0.0620673	MSX1,2.p2	AK093095|FLJ35776|649446|uncharacterized LOC649446	BC137437|FLJ35776|649446|uncharacterized LOC649446
hg19_v1_chr9_-_116840673_116840755	0.0614014	MSX1,2.p2	AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor	BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor	NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg19_v1_chr7_+_77469446_77469572	0.0596602	MSX1,2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr16_+_53479685_53479692	0.0596358	MSX1,2.p2	BX537767|RBL2|5934|retinoblastoma-like 2 (p130)
hg19_v1_chr12_-_52585686_52585802	0.0583881	MSX1,2.p2	AJ717743|KRT80|144501|keratin 80	BC033114|KRT80|144501|keratin 80	BC065180|KRT80|144501|keratin 80	NM_001081492|KRT80|144501|keratin 80	NM_182507|KRT80|144501|keratin 80
hg19_v1_chr12_+_54891522_54891536	0.0565027	MSX1,2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr9_-_116840545_116840550	0.0560762	MSX1,2.p2	AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg19_v1_chr8_-_93075190_93075190	0.0560495	MSX1,2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr7_+_132937819_132937880	0.0560327	MSX1,2.p2	NM_001037126|EXOC4|60412|exocyst complex component 4	NM_021807|EXOC4|60412|exocyst complex component 4	AF380839|EXOC4|60412|exocyst complex component 4	AK027688|EXOC4|60412|exocyst complex component 4	AL831989|EXOC4|60412|exocyst complex component 4	AK298191|EXOC4|60412|exocyst complex component 4	BC067263|EXOC4|60412|exocyst complex component 4	BC026174|EXOC4|60412|exocyst complex component 4	AB051486|EXOC4|60412|exocyst complex component 4
hg19_v1_chr11_-_85397215_85397319	0.0558918	MSX1,2.p2	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg19_v1_chr1_+_153232178_153232178	0.0537143	MSX1,2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg19_v1_chr4_-_70725792_70725869	0.0537139	MSX1,2.p2	S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1
hg19_v1_chr6_+_163984574_163984652	0.0532741	MSX1,2.p2	AL050218|QKI|9444|QKI, KH domain containing, RNA binding
hg19_v1_chr1_+_207277577_207277722	0.0510241	MSX1,2.p2	BC022312|C4BPA|722|complement component 4 binding protein, alpha	NM_000715|C4BPA|722|complement component 4 binding protein, alpha	AK303798|C4BPA|722|complement component 4 binding protein, alpha	AK313164|C4BPA|722|complement component 4 binding protein, alpha	M31452|C4BPA|722|complement component 4 binding protein, alpha	AK303793|C4BPA|722|complement component 4 binding protein, alpha
hg19_v1_chr7_+_27282163_27282163	0.0510039	MSX1,2.p2	AK299188|EVX1|2128|even-skipped homeobox 1	NM_001989|EVX1|2128|even-skipped homeobox 1
hg19_v1_chr21_-_19775958_19775972	0.0498844	MSX1,2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr20_+_18122867_18122963	0.0494712	MSX1,2.p2	NM_020536|CSRP2BP|57325|CSRP2 binding protein	BC007537|CSRP2BP|57325|CSRP2 binding protein
hg19_v1_chr17_+_33448597_33448712	0.0489649	MSX1,2.p2	AK313775|FNDC8|54752|fibronectin type III domain containing 8	NM_017559|FNDC8|54752|fibronectin type III domain containing 8	BC024002|FNDC8|54752|fibronectin type III domain containing 8	AK225743|FNDC8|54752|fibronectin type III domain containing 8	AL133054|FNDC8|54752|fibronectin type III domain containing 8	EU831600|FNDC8|54752|fibronectin type III domain containing 8	EU831687|FNDC8|54752|fibronectin type III domain containing 8
hg19_v1_chrX_+_16668280_16668314	0.0489103	MSX1,2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg19_v1_chr14_+_78870092_78870092	0.0483124	MSX1,2.p2	AB018286|NRXN3|9369|neurexin 3	BC152457|NRXN3|9369|neurexin 3	NM_004796|NRXN3|9369|neurexin 3
hg19_v1_chr6_-_32977312_32977341	0.0482703	MSX1,2.p2	DQ891048|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	DQ894226|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AY947479|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AY947480|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AY947481|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AY947482|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	BC013183|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	M26039|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AK310153|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AK313551|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha
hg19_v1_chr10_+_35484829_35484831	0.0480077	MSX1,2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator
hg19_v1_chr20_+_32150139_32150216	0.0479275	MSX1,2.p2	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v1_chr5_-_179044835_179044916	0.0475682	MSX1,2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr3_+_46616044_46616044	0.0473762	MSX1,2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg19_v1_chr16_-_46655262_46655283	0.0470015	MSX1,2.p2	EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1	EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1	EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1	AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1	AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1	AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1	AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1	BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1
hg19_v1_chr3_+_25470067_25470222	0.0459049	MSX1,2.p2	BC060794|RARB|5915|retinoic acid receptor, beta	AK292032|RARB|5915|retinoic acid receptor, beta	AB307688|RARB|5915|retinoic acid receptor, beta	HQ692864|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr3_+_186383770_186383799	0.0454754	MSX1,2.p2	AK313381|HRG|3273|histidine-rich glycoprotein	BC069574|HRG|3273|histidine-rich glycoprotein	NM_000412|HRG|3273|histidine-rich glycoprotein	BC150591|HRG|3273|histidine-rich glycoprotein
hg19_v1_chr17_+_48821106_48821114	0.0443225	MSX1,2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg19_v1_chr3_-_15798057_15798097	0.0442043	MSX1,2.p2	AY367056|ANKRD28|23243|ankyrin repeat domain 28	NM_001195099|ANKRD28|23243|ankyrin repeat domain 28	BC035170|ANKRD28|23243|ankyrin repeat domain 28	BC048975|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chr5_+_138211084_138211099	0.0441914	MSX1,2.p2	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr3_+_99833773_99833773	0.0437451	MSX1,2.p2	AK300704|C3orf26|84319|chromosome 3 open reading frame 26	NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26
hg19_v1_chr1_+_104292278_104292279	0.0430158	MSX1,2.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr17_+_4854383_4854426	0.0415641	MSX1,2.p2	NM_001193503|ENO3|2027|enolase 3 (beta, muscle)	NM_001976|ENO3|2027|enolase 3 (beta, muscle)	NM_053013|ENO3|2027|enolase 3 (beta, muscle)	AK300662|ENO3|2027|enolase 3 (beta, muscle)	AK300673|ENO3|2027|enolase 3 (beta, muscle)	AK300709|ENO3|2027|enolase 3 (beta, muscle)	AK309864|ENO3|2027|enolase 3 (beta, muscle)	BC017249|ENO3|2027|enolase 3 (beta, muscle)
hg19_v1_chr4_-_54457723_54457765	0.0401019	MSX1,2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr5_-_13944588_13944588	0.0384933	MSX1,2.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg19_v1_chr6_+_64231626_64231684	0.0379321	MSX1,2.p2	CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr7_-_99717463_99717480	0.0378961	MSX1,2.p2	AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa	NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v1_chr5_+_169780880_169780880	0.0377402	MSX1,2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg19_v1_chr8_-_27115935_27115980	0.037491	MSX1,2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chr12_+_54891491_54891519	0.0374475	MSX1,2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr10_-_74714479_74714543	0.0368938	MSX1,2.p2	AF349540|PLA2G12B|84647|phospholipase A2, group XIIB	BC093996|PLA2G12B|84647|phospholipase A2, group XIIB	BC111946|PLA2G12B|84647|phospholipase A2, group XIIB	BC143532|PLA2G12B|84647|phospholipase A2, group XIIB	AY358032|PLA2G12B|84647|phospholipase A2, group XIIB	NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB	AF339053|PLA2G12B|84647|phospholipase A2, group XIIB	AK313712|PLA2G12B|84647|phospholipase A2, group XIIB
hg19_v1_chr6_-_56507585_56507693	0.0367558	MSX1,2.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg19_v1_chr6_-_154677868_154677962	0.036245	MSX1,2.p2	AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1	AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1	NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1	NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1
hg19_v1_chr9_-_34662629_34662688	0.0360561	MSX1,2.p2	AF082393|CCL27|10850|chemokine (C-C motif) ligand 27	BC148263|CCL27|10850|chemokine (C-C motif) ligand 27	AJ243542|CCL27|10850|chemokine (C-C motif) ligand 27	AB010445|CCL27|10850|chemokine (C-C motif) ligand 27	NM_006664|CCL27|10850|chemokine (C-C motif) ligand 27
hg19_v1_chrX_-_153602928_153602972	0.0351214	MSX1,2.p2	X53416|FLNA|2316|filamin A, alpha
hg19_v1_chr3_-_114790221_114790260	0.0348787	MSX1,2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr1_+_31769826_31769845	0.0348255	MSX1,2.p2	AK022506|ZCCHC17|51538|zinc finger, CCHC domain containing 17	NM_016505|ZCCHC17|51538|zinc finger, CCHC domain containing 17
hg19_v1_chr14_-_24683035_24683035	0.0347137	MSX1,2.p2	BC113533|CHMP4A|29082|charged multivesicular body protein 4A	BC113535|CHMP4A|29082|charged multivesicular body protein 4A	BC143834|CHMP4A|29082|charged multivesicular body protein 4A	NM_014169|CHMP4A|29082|charged multivesicular body protein 4A
hg19_v1_chr7_+_91924291_91924419	0.0346669	MSX1,2.p2	
hg19_v1_chr1_-_201915715_201915717	0.0341789	MSX1,2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr1_+_84647342_84647342	0.0340363	MSX1,2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr17_-_56618178_56618178	0.0334055	MSX1,2.p2	AK301914|SEPT4|5414|septin 4	AK302146|SEPT4|5414|septin 4	NM_001198713|SEPT4|5414|septin 4
hg19_v1_chr3_-_97754147_97754147	0.0333588	MSX1,2.p2	CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg19_v1_chrX_-_153602998_153603005	0.0326377	MSX1,2.p2	AK125630|FLNA|2316|filamin A, alpha	GU727643|FLNA|2316|filamin A, alpha	NM_001110556|FLNA|2316|filamin A, alpha	NM_001456|FLNA|2316|filamin A, alpha
hg19_v1_chr9_+_1050367_1050374	0.0325027	MSX1,2.p2	Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2
hg19_v1_chr11_-_101000457_101000549	0.0324631	MSX1,2.p2	AK304853|PGR|5241|progesterone receptor	NM_000926|PGR|5241|progesterone receptor
hg19_v1_chrX_+_54947228_54947287	0.0322167	MSX1,2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chr2_-_211018294_211018388	0.0317888	MSX1,2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chr12_-_21654484_21654602	0.0317834	MSX1,2.p2	BC001052|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	AK291627|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_002907|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_032941|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)
hg19_v1_chr1_+_196788860_196788982	0.0316246	MSX1,2.p2	NM_002113|CFHR1|3078|complement factor H-related 1	BC107771|CFHR1|3078|complement factor H-related 1	AK290830|CFHR1|3078|complement factor H-related 1	BC016755|CFHR1|3078|complement factor H-related 1	M65292|CFHR1|3078|complement factor H-related 1	M65293|CFHR1|3078|complement factor H-related 1	X56210|CFHR1|3078|complement factor H-related 1	DQ892762|CFHR1|3078|complement factor H-related 1	DQ896007|CFHR1|3078|complement factor H-related 1	X56209|CFHR1|3078|complement factor H-related 1
hg19_v1_chr1_+_3541587_3541632	0.0316222	MSX1,2.p2	AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like	AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like	BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like
hg19_v1_chr5_+_73109342_73109359	0.0312402	MSX1,2.p2	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor	NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor
hg19_v1_chr6_-_31681845_31681850	0.0295188	MSX1,2.p2	
hg19_v1_chr2_-_162929928_162929997	0.0291106	MSX1,2.p2	AY429533|DPP4|1803|dipeptidyl-peptidase 4	AY429531|DPP4|1803|dipeptidyl-peptidase 4	AY429532|DPP4|1803|dipeptidyl-peptidase 4	BC013329|DPP4|1803|dipeptidyl-peptidase 4	AB451339|DPP4|1803|dipeptidyl-peptidase 4	AB451488|DPP4|1803|dipeptidyl-peptidase 4	M80536|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr11_-_55703875_55703875	0.028899	MSX1,2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg19_v1_chr1_+_15764934_15764960	0.0287592	MSX1,2.p2	BC015118|CTRC|11330|chymotrypsin C (caldecrin)	CR749296|CTRC|11330|chymotrypsin C (caldecrin)	NM_007272|CTRC|11330|chymotrypsin C (caldecrin)	AK289447|CTRC|11330|chymotrypsin C (caldecrin)	BC059779|CTRC|11330|chymotrypsin C (caldecrin)	S82198|CTRC|11330|chymotrypsin C (caldecrin)
hg19_v1_chr13_+_49684388_49684524	0.0287421	MSX1,2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg19_v1_chr17_+_41857802_41857827	0.0285333	MSX1,2.p2	BC054872|C17orf105|284067|chromosome 17 open reading frame 105	BC070324|C17orf105|284067|chromosome 17 open reading frame 105	NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105	BC146971|C17orf105|284067|chromosome 17 open reading frame 105	AK125817|C17orf105|284067|chromosome 17 open reading frame 105
hg19_v1_chr3_+_100238063_100238088	0.0285209	MSX1,2.p2	BC040355|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chrX_+_119737743_119737834	0.0285072	MSX1,2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr1_-_27953046_27953105	0.0278962	MSX1,2.p2	M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog
hg19_v1_chr1_+_32666201_32666252	0.0273256	MSX1,2.p2	AK092702|CCDC28B|79140|coiled-coil domain containing 28B	NM_024296|CCDC28B|79140|coiled-coil domain containing 28B	AK225113|CCDC28B|79140|coiled-coil domain containing 28B	BC002462|CCDC28B|79140|coiled-coil domain containing 28B	BC022848|CCDC28B|79140|coiled-coil domain containing 28B
hg19_v1_chr11_-_8680382_8680382	0.0272101	MSX1,2.p2	AB002296|TRIM66|9866|tripartite motif containing 66	NM_014818|TRIM66|9866|tripartite motif containing 66
hg19_v1_chr1_-_231005334_231005334	0.0269784	MSX1,2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg19_v1_chr10_-_65028825_65029005	0.026633	MSX1,2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg19_v1_chr6_-_31107110_31107126	0.0263574	MSX1,2.p2	AB031480|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	AF484420|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	NM_014069|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2
hg19_v1_chr17_+_27370155_27370243	0.0261896	MSX1,2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr5_+_161277391_161277391	0.026148	MSX1,2.p2	NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr4_+_110749149_110749158	0.0261262	MSX1,2.p2	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg19_v1_chr10_-_32667543_32667731	0.0259319	MSX1,2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg19_v1_chr12_+_7169192_7169204	0.0259211	MSX1,2.p2	
hg19_v1_chr6_-_123957941_123958237	0.025915	MSX1,2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr5_-_42811959_42812023	0.0252025	MSX1,2.p2	Z11793|SEPP1|6414|selenoprotein P, plasma, 1	BC040075|SEPP1|6414|selenoprotein P, plasma, 1	BC046152|SEPP1|6414|selenoprotein P, plasma, 1	BC058919|SEPP1|6414|selenoprotein P, plasma, 1	AK225801|SEPP1|6414|selenoprotein P, plasma, 1	AL833145|SEPP1|6414|selenoprotein P, plasma, 1	BC005244|SEPP1|6414|selenoprotein P, plasma, 1	BC015875|SEPP1|6414|selenoprotein P, plasma, 1	BC030009|SEPP1|6414|selenoprotein P, plasma, 1	NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1	NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1	NM_005410|SEPP1|6414|selenoprotein P, plasma, 1
hg19_v1_chr1_-_3816704_3816822	0.0251991	MSX1,2.p2	BC035643|C1orf174|339448|chromosome 1 open reading frame 174	BC047611|C1orf174|339448|chromosome 1 open reading frame 174
hg19_v1_chr1_+_3541550_3541579	0.0248294	MSX1,2.p2	NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like	AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like
hg19_v1_chr3_-_71542628_71542706	0.0240507	MSX1,2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg19_v1_chr16_+_31469456_31469658	0.0236779	MSX1,2.p2	AK295790|ARMC5|79798|armadillo repeat containing 5
hg19_v1_chr7_-_115670774_115670798	0.0236229	MSX1,2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC
hg19_v1_chr3_-_42305438_42305438	0.0233933	MSX1,2.p2	BC008283|CCK|885|cholecystokinin	NM_001174138|CCK|885|cholecystokinin
hg19_v1_chr4_-_89205667_89205788	0.0230898	MSX1,2.p2	AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K
hg19_v1_chr20_+_43835637_43835694	0.0229897	MSX1,2.p2	NM_003007|SEMG1|6406|semenogelin I	BC005229|SEMG1|6406|semenogelin I	BC007096|SEMG1|6406|semenogelin I	BC011442|SEMG1|6406|semenogelin I	BC055416|SEMG1|6406|semenogelin I	J04440|SEMG1|6406|semenogelin I	BT007177|SEMG1|6406|semenogelin I
hg19_v1_chr16_-_12010518_12010518	0.0227941	MSX1,2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chr12_+_53818864_53818869	0.0222572	MSX1,2.p2	CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II
hg19_v1_chr1_+_120254418_120254645	0.0220673	MSX1,2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr4_+_155484131_155484194	0.0219078	MSX1,2.p2	AK312972|FGB|2244|fibrinogen beta chain	NM_001184741|FGB|2244|fibrinogen beta chain	NM_005141|FGB|2244|fibrinogen beta chain	AK303788|FGB|2244|fibrinogen beta chain	AK311683|FGB|2244|fibrinogen beta chain	BC106760|FGB|2244|fibrinogen beta chain	BC036007|FGB|2244|fibrinogen beta chain	BC007030|FGB|2244|fibrinogen beta chain	BC107766|FGB|2244|fibrinogen beta chain	BC060040|FGB|2244|fibrinogen beta chain	AK309592|FGB|2244|fibrinogen beta chain	BC070245|FGB|2244|fibrinogen beta chain	J00129|FGB|2244|fibrinogen beta chain
hg19_v1_chr17_+_37856224_37856230	0.0218445	MSX1,2.p2	AK300321|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
hg19_v1_chr13_-_70682458_70682624	0.0217908	MSX1,2.p2	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)	AB040923|KLHL1|57626|kelch-like 1 (Drosophila)	AK291435|KLHL1|57626|kelch-like 1 (Drosophila)	NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)
hg19_v1_chr9_-_86584079_86584113	0.0216874	MSX1,2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr21_-_37852387_37852387	0.0216445	MSX1,2.p2	AF314090|CLDN14|23562|claudin 14	AY355348|CLDN14|23562|claudin 14	NM_001146079|CLDN14|23562|claudin 14	NM_144492|CLDN14|23562|claudin 14
hg19_v1_chr3_-_113897849_113897983	0.0214592	MSX1,2.p2	AY228457|DRD3|1814|dopamine receptor D3	AY228458|DRD3|1814|dopamine receptor D3	NM_000796|DRD3|1814|dopamine receptor D3	NM_033663|DRD3|1814|dopamine receptor D3	AY228454|DRD3|1814|dopamine receptor D3
hg19_v1_chr17_-_38859976_38860001	0.021313	MSX1,2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg19_v1_chr20_+_24929862_24929865	0.0211504	MSX1,2.p2	NM_003650|CST7|8530|cystatin F (leukocystatin)
hg19_v1_chr1_-_26644755_26644853	0.0208902	MSX1,2.p2	NM_145345|UBXN11|91544|UBX domain protein 11	AK097368|UBXN11|91544|UBX domain protein 11
hg19_v1_chr9_+_75136716_75136716	0.0201438	MSX1,2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg19_v1_chr16_-_72128214_72128214	0.0200813	MSX1,2.p2	NM_001142318|TXNL4B|54957|thioredoxin-like 4B
hg19_v1_chr14_-_50474237_50474237	0.0198773	MSX1,2.p2	AK091232|C14orf182|283551|chromosome 14 open reading frame 182	NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182
hg19_v1_chr13_+_103459495_103459825	0.0197492	MSX1,2.p2	NM_001204425|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough	BC075084|BIVM|54841|basic, immunoglobulin-like variable motif containing	BC075085|BIVM|54841|basic, immunoglobulin-like variable motif containing	AB209312|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough	AK000166|BIVM|54841|basic, immunoglobulin-like variable motif containing	AK225229|BIVM|54841|basic, immunoglobulin-like variable motif containing	BC020663|BIVM|54841|basic, immunoglobulin-like variable motif containing	BC051813|BIVM|54841|basic, immunoglobulin-like variable motif containing
hg19_v1_chr1_+_22979681_22979765	0.0197119	MSX1,2.p2	NM_000491|C1QB|713|complement component 1, q subcomponent, B chain	BC008983|C1QB|713|complement component 1, q subcomponent, B chain
hg19_v1_chr7_-_91764036_91764058	0.019479	MSX1,2.p2	AK295932|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	NM_001146152|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1
hg19_v1_chr3_-_148939784_148939831	0.0194219	MSX1,2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg19_v1_chr19_-_44079609_44079687	0.0191479	MSX1,2.p2	CR456728|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1	BC023593|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1	AB208781|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1
hg19_v1_chr1_+_36772696_36772717	0.0190983	MSX1,2.p2	NM_024676|SH3D21|79729|SH3 domain containing 21	AK297015|SH3D21|79729|SH3 domain containing 21	AK056459|SH3D21|79729|SH3 domain containing 21
hg19_v1_chr1_-_206945725_206946033	0.0187769	MSX1,2.p2	AF043333|IL10|3586|interleukin 10	AY029171|IL10|3586|interleukin 10	CR541993|IL10|3586|interleukin 10	CR542028|IL10|3586|interleukin 10	M57627|IL10|3586|interleukin 10	BC104252|IL10|3586|interleukin 10	BC104253|IL10|3586|interleukin 10	BC022315|IL10|3586|interleukin 10	NM_000572|IL10|3586|interleukin 10
hg19_v1_chr17_-_4890664_4890736	0.0186573	MSX1,2.p2	AL831849|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2
hg19_v1_chr11_-_17191287_17191353	0.0182663	MSX1,2.p2	Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	HQ258691|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide
hg19_v1_chr17_+_3379295_3379453	0.0182074	MSX1,2.p2	NM_000049|ASPA|443|aspartoacylase	S67156|ASPA|443|aspartoacylase	BC029128|ASPA|443|aspartoacylase	BC010941|ASPA|443|aspartoacylase	CR541908|ASPA|443|aspartoacylase	DQ892079|ASPA|443|aspartoacylase	DQ895272|ASPA|443|aspartoacylase
hg19_v1_chr6_+_29624757_29624992	0.0180374	MSX1,2.p2	NM_001008228|MOG|4340|myelin oligodendrocyte glycoprotein	NM_001008229|MOG|4340|myelin oligodendrocyte glycoprotein	NM_001170418|MOG|4340|myelin oligodendrocyte glycoprotein	NM_002433|MOG|4340|myelin oligodendrocyte glycoprotein	NM_206809|MOG|4340|myelin oligodendrocyte glycoprotein	NM_206810|MOG|4340|myelin oligodendrocyte glycoprotein	NM_206811|MOG|4340|myelin oligodendrocyte glycoprotein	NM_206812|MOG|4340|myelin oligodendrocyte glycoprotein	NM_206814|MOG|4340|myelin oligodendrocyte glycoprotein	AK308949|MOG|4340|myelin oligodendrocyte glycoprotein	AB209815|MOG|4340|myelin oligodendrocyte glycoprotein	BC035938|MOG|4340|myelin oligodendrocyte glycoprotein	AK312892|MOG|4340|myelin oligodendrocyte glycoprotein	AK295213|MOG|4340|myelin oligodendrocyte glycoprotein	AY566852|MOG|4340|myelin oligodendrocyte glycoprotein	DQ892374|MOG|4340|myelin oligodendrocyte glycoprotein	DQ895585|MOG|4340|myelin oligodendrocyte glycoprotein	DQ895586|MOG|4340|myelin oligodendrocyte glycoprotein	EU176510|MOG|4340|myelin oligodendrocyte glycoprotein	U18798|MOG|4340|myelin oligodendrocyte glycoprotein	U18799|MOG|4340|myelin oligodendrocyte glycoprotein	U18800|MOG|4340|myelin oligodendrocyte glycoprotein	U18801|MOG|4340|myelin oligodendrocyte glycoprotein	U18803|MOG|4340|myelin oligodendrocyte glycoprotein	U18840|MOG|4340|myelin oligodendrocyte glycoprotein	U18843|MOG|4340|myelin oligodendrocyte glycoprotein	X74511|MOG|4340|myelin oligodendrocyte glycoprotein	AY566847|MOG|4340|myelin oligodendrocyte glycoprotein	AY566848|MOG|4340|myelin oligodendrocyte glycoprotein	AY566851|MOG|4340|myelin oligodendrocyte glycoprotein	AY566853|MOG|4340|myelin oligodendrocyte glycoprotein	AY566854|MOG|4340|myelin oligodendrocyte glycoprotein
hg19_v1_chr15_+_65914269_65914269	0.0179771	MSX1,2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg19_v1_chr13_-_99910548_99910681	0.0179217	MSX1,2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg19_v1_chr10_+_70748476_70748594	0.0173324	MSX1,2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr1_+_33004969_33005120	0.0171672	MSX1,2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr22_+_40573879_40574120	0.017104	MSX1,2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg19_v1_chr20_+_23345020_23345020	0.0168445	MSX1,2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg19_v1_chr5_+_140514787_140515017	0.0167054	MSX1,2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg19_v1_chr12_-_14132920_14133052	0.0164774	MSX1,2.p2	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v1_chr14_-_68283293_68283306	0.0160705	MSX1,2.p2	AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26	AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26	CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26	CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26	AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26	NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26
hg19_v1_chr10_-_73848530_73848530	0.0158901	MSX1,2.p2	BC023558|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	NM_001244950|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr14_-_73925214_73925251	0.0155349	MSX1,2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr11_+_1889902_1889902	0.0153607	MSX1,2.p2	NM_001013253|LSP1|4046|lymphocyte-specific protein 1
hg19_v1_chr2_-_25468909_25469047	0.0153369	MSX1,2.p2	AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v1_chr14_-_91976630_91976644	0.0151664	MSX1,2.p2	NM_032560|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v1_chr14_-_94254765_94254765	0.0149631	MSX1,2.p2	AY225516|PRIMA1|145270|proline rich membrane anchor 1	AY225517|PRIMA1|145270|proline rich membrane anchor 1	NM_178013|PRIMA1|145270|proline rich membrane anchor 1
hg19_v1_chr3_-_71179715_71179732	0.0147605	MSX1,2.p2	AK027264|FOXP1|27086|forkhead box P1
hg19_v1_chr20_-_5931036_5931210	0.0145396	MSX1,2.p2	AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)
hg19_v1_chr11_+_55944093_55944093	0.0144368	MSX1,2.p2	NM_001005492|OR5J2|282775|olfactory receptor, family 5, subfamily J, member 2
hg19_v1_chr7_-_92855780_92855786	0.0139218	MSX1,2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr13_+_111839172_111839200	0.0136386	MSX1,2.p2	NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr20_-_34243118_34243244	0.0131996	MSX1,2.p2	DQ893493|RBM12|10137|RNA binding motif protein 12	DQ896437|RBM12|10137|RNA binding motif protein 12
hg19_v1_chrX_+_154444700_154444759	0.0128972	MSX1,2.p2	NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1	BC009570|VBP1|7411|von Hippel-Lindau binding protein 1	AK313420|VBP1|7411|von Hippel-Lindau binding protein 1	BC046094|VBP1|7411|von Hippel-Lindau binding protein 1	Y17394|VBP1|7411|von Hippel-Lindau binding protein 1	BC040002|VBP1|7411|von Hippel-Lindau binding protein 1	BT019604|VBP1|7411|von Hippel-Lindau binding protein 1
hg19_v1_chr8_-_72274466_72274485	0.0124199	MSX1,2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr9_-_86595167_86595183	0.0122666	MSX1,2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr10_-_98336445_98336573	0.0117731	MSX1,2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr2_-_162931051_162931062	0.0117558	MSX1,2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr1_+_33004771_33004771	0.0117543	MSX1,2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr1_+_116654375_116654375	0.0115466	MSX1,2.p2	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)	NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)
hg19_v1_chr9_-_86595079_86595162	0.011183	MSX1,2.p2	BC000355|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	BC025321|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	AB209562|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	AK096385|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	AK300744|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	AK307962|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K	AK294067|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr4_-_89744154_89744408	0.0110798	MSX1,2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg19_v1_chr13_-_46679143_46679210	0.0110494	MSX1,2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg19_v1_chr6_-_30525370_30525370	0.0108994	MSX1,2.p2	NM_005275|GNL1|2794|guanine nucleotide binding protein-like 1
hg19_v1_chr17_-_4890920_4890984	0.0108566	MSX1,2.p2	AB020716|CAMTA2|23125|calmodulin binding transcription activator 2	BC167148|CAMTA2|23125|calmodulin binding transcription activator 2	BC167149|CAMTA2|23125|calmodulin binding transcription activator 2	BC167151|CAMTA2|23125|calmodulin binding transcription activator 2	BC167160|CAMTA2|23125|calmodulin binding transcription activator 2	EU832136|CAMTA2|23125|calmodulin binding transcription activator 2	EU832229|CAMTA2|23125|calmodulin binding transcription activator 2	AK302528|CAMTA2|23125|calmodulin binding transcription activator 2	AL833974|CAMTA2|23125|calmodulin binding transcription activator 2	BC142695|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2	NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2
hg19_v1_chr17_+_37856253_37856271	0.0103991	MSX1,2.p2	NM_004448|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
hg19_v1_chr6_-_114384008_114384041	0.0100616	MSX1,2.p2	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
hg19_v1_chr12_+_14538232_14538312	0.0100452	MSX1,2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg19_v1_chr7_+_80231503_80231540	0.00996759	MSX1,2.p2	NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)	AK129899|CD36|948|CD36 molecule (thrombospondin receptor)	AK300101|CD36|948|CD36 molecule (thrombospondin receptor)	AK312920|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr4_+_154178525_154178554	0.00938034	MSX1,2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr19_+_36119934_36119950	0.00931017	MSX1,2.p2	BC031682|RBM42|79171|RNA binding motif protein 42
hg19_v1_chr8_-_22089850_22089850	0.0091253	MSX1,2.p2	NM_001099335|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein	NM_014759|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein
hg19_v1_chr7_-_27159213_27159213	0.00894099	MSX1,2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg19_v1_chr7_+_94539209_94539209	0.00865003	MSX1,2.p2	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A	NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A	NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A
hg19_v1_chr6_-_32977351_32977388	0.0086371	MSX1,2.p2	AK301404|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	M38056|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	AK290714|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	M31525|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha	NM_002119|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha
hg19_v1_chr7_-_86595203_86595290	0.0085947	MSX1,2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg19_v1_chr16_-_90128591_90128732	0.00852261	MSX1,2.p2	BC107033|PRDM7|11105|PR domain containing 7	AF274347|PRDM7|11105|PR domain containing 7	AF274348|PRDM7|11105|PR domain containing 7	NM_052996|PRDM7|11105|PR domain containing 7
hg19_v1_chr22_+_40322609_40322640	0.0084515	MSX1,2.p2	AK303280|GRAP2|9402|GRB2-related adaptor protein 2	AK303657|GRAP2|9402|GRB2-related adaptor protein 2	AK312830|GRAP2|9402|GRB2-related adaptor protein 2	AK303470|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr17_+_56769929_56769941	0.00837543	MSX1,2.p2	BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chrM_+_8857_9057	0.00829095	MSX1,2.p2	
hg19_v1_chr4_-_26491888_26492083	0.00811311	MSX1,2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg19_v1_chr4_-_83347222_83347249	0.00804669	MSX1,2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chrX_+_47004619_47004631	0.00800732	MSX1,2.p2	BC008733|RBM10|8241|RNA binding motif protein 10
hg19_v1_chr22_+_39966757_39966757	0.00792939	MSX1,2.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg19_v1_chr4_-_155533757_155533797	0.00775492	MSX1,2.p2	BT007081|FGG|2266|fibrinogen gamma chain
hg19_v1_chr12_+_56915587_56915807	0.00775459	MSX1,2.p2	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2
hg19_v1_chr20_-_35444558_35444683	0.00697483	MSX1,2.p2	AK131491|KIAA0889|140710|KIAA0889
hg19_v1_chr6_-_130536417_130536493	0.00686606	MSX1,2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chrX_+_47004609_47004617	0.00674501	MSX1,2.p2	NM_001204466|RBM10|8241|RNA binding motif protein 10	NM_001204467|RBM10|8241|RNA binding motif protein 10	NM_001204468|RBM10|8241|RNA binding motif protein 10	NM_005676|RBM10|8241|RNA binding motif protein 10	NM_152856|RBM10|8241|RNA binding motif protein 10
hg19_v1_chr19_+_6772801_6772815	0.00624512	MSX1,2.p2	
hg19_v1_chr1_+_110560111_110560144	0.00572937	MSX1,2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr2_+_171784947_171785035	0.00564471	MSX1,2.p2	NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa
hg19_v1_chr13_+_52598678_52598826	0.00558644	MSX1,2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v1_chrX_+_28605558_28605680	0.00555255	MSX1,2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr3_-_52294427_52294468	0.00534128	MSX1,2.p2	BC018941|WDR82|80335|WD repeat domain 82	AK074290|WDR82|80335|WD repeat domain 82
hg19_v1_chr17_+_39388714_39388751	0.00525839	MSX1,2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr4_+_148538508_148538559	0.00517519	MSX1,2.p2	BC046128|TMEM184C|55751|transmembrane protein 184C	NM_018241|TMEM184C|55751|transmembrane protein 184C
hg19_v1_chr8_+_24298442_24298621	0.00516672	MSX1,2.p2	BC058037|ADAM7|8756|ADAM metallopeptidase domain 7	AK292492|ADAM7|8756|ADAM metallopeptidase domain 7	NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7	AF215824|ADAM7|8756|ADAM metallopeptidase domain 7
hg19_v1_chr6_-_139309017_139309137	0.00501453	MSX1,2.p2	BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1	AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1
hg19_v1_chr5_-_169724614_169724689	0.00474038	MSX1,2.p2	BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
hg19_v1_chr19_-_17375522_17375572	0.00470679	MSX1,2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg19_v1_chr9_+_1050333_1050356	0.00460975	MSX1,2.p2	BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2	NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2	BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2	NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2	AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2	AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2
hg19_v1_chr3_+_108855560_108855566	0.00451736	MSX1,2.p2	AK026416|FLJ22763|401081|uncharacterized LOC401081
hg19_v1_chr1_+_196621007_196621247	0.00443327	MSX1,2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg19_v1_chr2_-_231789940_231789940	0.00414045	MSX1,2.p2	BC032694|GPR55|9290|G protein-coupled receptor 55	NM_005683|GPR55|9290|G protein-coupled receptor 55
hg19_v1_chr13_-_99959649_99959748	0.0038167	MSX1,2.p2	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg19_v1_chr6_-_31830593_31830708	0.00377493	MSX1,2.p2	AK313006|NEU1|4758|sialidase 1 (lysosomal sialidase)	AK290966|NEU1|4758|sialidase 1 (lysosomal sialidase)	X78687|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC000722|NEU1|4758|sialidase 1 (lysosomal sialidase)	AF040958|NEU1|4758|sialidase 1 (lysosomal sialidase)	NM_000434|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg19_v1_chr6_-_46047978_46048084	0.00358596	MSX1,2.p2	AY032602|CLIC5|53405|chloride intracellular channel 5	AK097048|CLIC5|53405|chloride intracellular channel 5	NM_001114086|CLIC5|53405|chloride intracellular channel 5
hg19_v1_chr1_-_158656487_158656505	0.00358512	MSX1,2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg19_v1_chr12_+_54892567_54892567	0.00355815	MSX1,2.p2	AK300783|NCKAP1L|3071|NCK-associated protein 1-like	NM_001184976|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr11_+_101983170_101983244	0.00338996	MSX1,2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr14_-_94759360_94759360	0.0033337	MSX1,2.p2	AF181467|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	NM_016186|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v1_chr12_-_93323006_93323081	0.00333219	MSX1,2.p2	BC017837|EEA1|8411|early endosome antigen 1	AK292008|EEA1|8411|early endosome antigen 1	AK307918|EEA1|8411|early endosome antigen 1
hg19_v1_chr15_+_62939509_62939509	0.00301668	MSX1,2.p2	AF402000|TLN2|83660|talin 2	NM_015059|TLN2|83660|talin 2
hg19_v1_chr3_-_71179736_71179745	0.00291364	MSX1,2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg19_v1_chr12_+_107078476_107078591	0.00289379	MSX1,2.p2	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg19_v1_chr6_+_54173202_54173348	0.00249704	MSX1,2.p2	BC070278|TINAG|27283|tubulointerstitial nephritis antigen	NM_014464|TINAG|27283|tubulointerstitial nephritis antigen	AK312918|TINAG|27283|tubulointerstitial nephritis antigen	BC056235|TINAG|27283|tubulointerstitial nephritis antigen	AB022277|TINAG|27283|tubulointerstitial nephritis antigen	AF195116|TINAG|27283|tubulointerstitial nephritis antigen	AF195117|TINAG|27283|tubulointerstitial nephritis antigen	EU832329|TINAG|27283|tubulointerstitial nephritis antigen	EU832414|TINAG|27283|tubulointerstitial nephritis antigen
hg19_v1_chr15_+_80351909_80351976	0.00248428	MSX1,2.p2	NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6	AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr12_-_11139510_11139510	0.00247925	MSX1,2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg19_v1_chr19_+_4402658_4402775	0.00194407	MSX1,2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chr6_-_25930838_25930945	0.00189033	MSX1,2.p2	U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2	NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2
hg19_v1_chr14_+_105957569_105957703	0.0018871	MSX1,2.p2	NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80	NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80	BX248283|C14orf80|283643|chromosome 14 open reading frame 80	BX248074|C14orf80|283643|chromosome 14 open reading frame 80	BC016028|C14orf80|283643|chromosome 14 open reading frame 80
hg19_v1_chr16_-_3085541_3085541	0.0018119	MSX1,2.p2	BC128602|CCDC64B|146439|coiled-coil domain containing 64B	NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B
hg19_v1_chr3_+_52828783_52828815	0.0017469	MSX1,2.p2	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3
hg19_v1_chr10_-_121602030_121602097	0.00156703	MSX1,2.p2	BC000935|MCMBP|79892|minichromosome maintenance complex binding protein
hg19_v1_chr6_+_154331630_154331635	0.00141302	MSX1,2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg19_v1_chr5_-_169724734_169724776	0.00134043	MSX1,2.p2	BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
hg19_v1_chrX_+_153657119_153657190	0.00128875	MSX1,2.p2	AK091083|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1
hg19_v1_chr12_+_57828457_57828669	0.00127071	MSX1,2.p2	AK314849|INHBC|3626|inhibin, beta C	BC020693|INHBC|3626|inhibin, beta C	NM_005538|INHBC|3626|inhibin, beta C	BC130324|INHBC|3626|inhibin, beta C	BC130326|INHBC|3626|inhibin, beta C
hg19_v1_chr14_-_99947113_99947132	0.000695873	MSX1,2.p2	BC066931|SETD3|84193|SET domain containing 3	BX161441|SETD3|84193|SET domain containing 3
hg19_v1_chr19_+_48325098_48325212	0.000322164	MSX1,2.p2	NM_000554|CRX|1406|cone-rod homeobox	DQ426868|CRX|1406|cone-rod homeobox	BC016664|CRX|1406|cone-rod homeobox	DQ426867|CRX|1406|cone-rod homeobox	BC053672|CRX|1406|cone-rod homeobox
hg19_v1_chr10_+_94833646_94833666	0.000309686	MSX1,2.p2	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1
hg19_v1_chr19_+_40872709_40872857	0.000257573	MSX1,2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr11_+_61717355_61717355	0.000251565	MSX1,2.p2	BC015220|BEST1|7439|bestrophin 1	NM_001139443|BEST1|7439|bestrophin 1	NM_004183|BEST1|7439|bestrophin 1
hg19_v1_chrX_+_47004633_47004656	0.000200369	MSX1,2.p2	AK000962|RBM10|8241|RNA binding motif protein 10
