hg19_v1_chr7_+_26400503_26400554	1.51571	SOX2.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chr2_-_161056762_161056829	1.31865	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg19_v1_chr12_-_52886971_52887180	1.01406	SOX2.p2	BT006899|KRT6A|3853|keratin 6A	BC125058|KRT6A|3853|keratin 6A	BC139753|KRT6A|3853|keratin 6A	DQ890619|KRT6A|3853|keratin 6A	DQ893788|KRT6A|3853|keratin 6A	BC069269|KRT6A|3853|keratin 6A	BC008807|KRT6A|3853|keratin 6A	BC014152|KRT6A|3853|keratin 6A	AK299386|KRT6A|3853|keratin 6A	AK299428|KRT6A|3853|keratin 6A	AK301686|KRT6A|3853|keratin 6A	AK290245|KRT6A|3853|keratin 6A	NM_005554|KRT6A|3853|keratin 6A
hg19_v1_chr11_-_16424391_16424412	0.822564	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr18_+_29027731_29027757	0.766225	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr18_-_74728677_74728836	0.750909	SOX2.p2	AK074315|MBP|4155|myelin basic protein
hg19_v1_chr12_-_67072881_67072924	0.736339	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr7_-_83824216_83824429	0.732559	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v1_chr8_+_32504250_32504250	0.610027	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg19_v1_chr3_+_189349215_189349304	0.597408	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg19_v1_chr3_+_189507448_189507589	0.567632	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg19_v1_chr8_+_124194751_124194829	0.552251	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr10_-_105845619_105845640	0.545558	SOX2.p2	BC004478|COL17A1|1308|collagen, type XVII, alpha 1	D63465|COL17A1|1308|collagen, type XVII, alpha 1	NM_000494|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr8_-_80993009_80993050	0.544766	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr3_-_151034514_151034635	0.530068	SOX2.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg19_v1_chr5_+_140213968_140213968	0.514347	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg19_v1_chr2_-_165424993_165425016	0.511774	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg19_v1_chr10_-_105845556_105845583	0.511477	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg19_v1_chr7_-_41742666_41742705	0.509437	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg19_v1_chr10_-_123356158_123356158	0.509238	SOX2.p2	AK294026|FGFR2|2263|fibroblast growth factor receptor 2	NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2
hg19_v1_chr9_-_23826062_23826062	0.485377	SOX2.p2	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg19_v1_chr5_+_140254930_140255057	0.478369	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12	HQ258507|PCDHA12|56137|protocadherin alpha 12
hg19_v1_chr1_+_209602164_209602167	0.473897	SOX2.p2	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)
hg19_v1_chr2_-_161056573_161056601	0.473797	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg19_v1_chr6_-_136788012_136788012	0.46395	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr8_+_104831415_104831735	0.436764	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chrX_-_24690740_24690978	0.42923	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr15_+_41136622_41136780	0.427955	SOX2.p2	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr5_+_140186658_140186772	0.427047	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4	HQ258500|PCDHA4|56144|protocadherin alpha 4
hg19_v1_chr15_+_41136178_41136522	0.422531	SOX2.p2	AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr12_-_95611023_95611450	0.420083	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg19_v1_chr17_-_39675078_39675269	0.414873	SOX2.p2	BT007261|KRT15|3866|keratin 15	DQ892990|KRT15|3866|keratin 15	DQ896238|KRT15|3866|keratin 15	BC110649|KRT15|3866|keratin 15	BC002641|KRT15|3866|keratin 15	X07696|KRT15|3866|keratin 15	AK304059|KRT15|3866|keratin 15	NM_002275|KRT15|3866|keratin 15
hg19_v1_chr1_-_153029987_153029987	0.402103	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg19_v1_chr12_-_8815479_8815486	0.399953	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chrX_-_31526414_31526414	0.399805	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg19_v1_chr8_+_124194873_124195093	0.392989	SOX2.p2	BC007828|FAM83A|84985|family with sequence similarity 83, member A
hg19_v1_chr5_+_140207562_140207676	0.39163	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg19_v1_chr7_+_16793320_16793592	0.390153	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg19_v1_chr10_-_103874661_103874795	0.385429	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg19_v1_chr19_+_35606731_35606798	0.383373	SOX2.p2	NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3	BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3	U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3
hg19_v1_chr3_+_122044010_122044139	0.372956	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg19_v1_chrX_-_106449543_106449669	0.368793	SOX2.p2	AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like	NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like
hg19_v1_chr12_-_8815266_8815327	0.368356	SOX2.p2	AK315807|MFAP5|8076|microfibrillar associated protein 5	BC005901|MFAP5|8076|microfibrillar associated protein 5	AK290585|MFAP5|8076|microfibrillar associated protein 5	AK299475|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr12_-_28124915_28124915	0.365033	SOX2.p2	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr5_+_140201221_140201360	0.358863	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg19_v1_chr5_+_147258273_147258365	0.354207	SOX2.p2	BC024232|SCGB3A2|117156|secretoglobin, family 3A, member 2	NM_054023|SCGB3A2|117156|secretoglobin, family 3A, member 2	AF439545|SCGB3A2|117156|secretoglobin, family 3A, member 2	AY358979|SCGB3A2|117156|secretoglobin, family 3A, member 2	AF313455|SCGB3A2|117156|secretoglobin, family 3A, member 2	DQ893093|SCGB3A2|117156|secretoglobin, family 3A, member 2	DQ896365|SCGB3A2|117156|secretoglobin, family 3A, member 2
hg19_v1_chr6_+_90276556_90276694	0.345923	SOX2.p2	NM_001242814|ANKRD6|22881|ankyrin repeat domain 6	AK096867|ANKRD6|22881|ankyrin repeat domain 6
hg19_v1_chr15_+_43885251_43885293	0.344549	SOX2.p2	NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B	AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A
hg19_v1_chr1_+_155099935_155099948	0.342942	SOX2.p2	AK057845|EFNA1|1942|ephrin-A1
hg19_v1_chr2_-_31352489_31352505	0.339813	SOX2.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr20_+_20348744_20348764	0.338785	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg19_v1_chr10_-_14646237_14646398	0.335922	SOX2.p2	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr3_-_189840225_189840225	0.331801	SOX2.p2	NM_001134418|LEPREL1|55214|leprecan-like 1
hg19_v1_chrX_+_105937067_105937084	0.327542	SOX2.p2	BC036901|RNF128|79589|ring finger protein 128	NM_024539|RNF128|79589|ring finger protein 128	AK126553|RNF128|79589|ring finger protein 128
hg19_v1_chr11_-_85430382_85430382	0.322834	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr4_+_41258941_41259010	0.318128	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_+_140235594_140235633	0.315742	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chr5_-_175964223_175964431	0.30011	SOX2.p2	AB029023|RNF44|22838|ring finger protein 44	BC039833|RNF44|22838|ring finger protein 44	BC063297|RNF44|22838|ring finger protein 44	NM_014901|RNF44|22838|ring finger protein 44
hg19_v1_chr19_+_751108_751151	0.295017	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg19_v1_chr11_-_85430117_85430210	0.289295	SOX2.p2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chrX_-_33357725_33357725	0.284651	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg19_v1_chr1_-_226926875_226927002	0.282295	SOX2.p2	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B
hg19_v1_chr11_+_34654010_34654010	0.275834	SOX2.p2	AK310867|EHF|26298|ets homologous factor	NM_001206616|EHF|26298|ets homologous factor
hg19_v1_chr8_+_102504836_102504985	0.272256	SOX2.p2	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr7_+_20370324_20370350	0.270776	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg19_v1_chr4_-_15939949_15939972	0.268884	SOX2.p2	BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1	M60047|FGFBP1|9982|fibroblast growth factor binding protein 1	BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1	BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1	AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1
hg19_v1_chr8_-_17579729_17579729	0.265798	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr1_-_57888785_57888871	0.262161	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr7_+_18548899_18548948	0.261461	SOX2.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr1_-_116383323_116383361	0.261277	SOX2.p2	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr4_+_41258909_41258928	0.260874	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr6_+_121756744_121756906	0.259556	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chr10_-_14646407_14646451	0.254582	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr4_+_41258895_41258897	0.25401	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr16_+_56815703_56815767	0.252544	SOX2.p2	NM_001242795|NUP93|9688|nucleoporin 93kDa	AK056637|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr11_-_16497917_16497934	0.249426	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr16_+_57673206_57673429	0.248877	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg19_v1_chr20_+_58630965_58631025	0.242055	SOX2.p2	AK091179|C20orf197|284756|chromosome 20 open reading frame 197	NM_173644|C20orf197|284756|chromosome 20 open reading frame 197
hg19_v1_chr12_-_8815370_8815432	0.241626	SOX2.p2	U37283|MFAP5|8076|microfibrillar associated protein 5	NM_003480|MFAP5|8076|microfibrillar associated protein 5
hg19_v1_chr5_+_36608430_36608563	0.236445	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr11_+_6866882_6866913	0.236211	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg19_v1_chr4_+_77356252_77356252	0.235323	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg19_v1_chr5_+_36606667_36606790	0.234664	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr6_-_11779279_11779279	0.229996	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg19_v1_chr21_+_18885104_18885223	0.228899	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr7_+_94297448_94297456	0.228423	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr2_+_18059923_18059986	0.227261	SOX2.p2	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg19_v1_chr2_+_75061234_75061287	0.226853	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg19_v1_chr3_-_139258373_139258472	0.226818	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr17_-_46651809_46651848	0.226219	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg19_v1_chr10_-_61900659_61900773	0.223899	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr3_-_139258477_139258489	0.222849	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr11_+_6897855_6897878	0.222746	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg19_v1_chr1_+_81771844_81772011	0.221298	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr22_-_27014037_27014088	0.220543	SOX2.p2	BC036790|CRYBB1|1414|crystallin, beta B1
hg19_v1_chrX_-_117107700_117107759	0.212814	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr1_+_82266081_82266081	0.212409	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr7_+_20370724_20370745	0.211374	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg19_v1_chr1_-_32801606_32801856	0.209693	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chr5_+_36606456_36606456	0.209091	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr20_+_9198036_9198081	0.208382	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr21_+_18885296_18885447	0.205749	SOX2.p2	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr10_+_24755459_24755479	0.2057	SOX2.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg19_v1_chr6_-_136847743_136847851	0.205328	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr17_+_54230835_54230838	0.20431	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v1_chr10_-_88717319_88717424	0.203706	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg19_v1_chr4_-_123542165_123542211	0.203639	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_001207006|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg19_v1_chr8_-_21988518_21988662	0.203095	SOX2.p2	NM_005144|HR|55806|hairless homolog (mouse)	NM_018411|HR|55806|hairless homolog (mouse)
hg19_v1_chr10_-_62332666_62332715	0.202607	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr5_+_140165875_140165875	0.202484	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr5_+_145317297_145317439	0.20171	SOX2.p2	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2
hg19_v1_chrX_-_84634396_84634458	0.20126	SOX2.p2	DQ892227|POF1B|79983|premature ovarian failure, 1B
hg19_v1_chr4_+_40198526_40198757	0.200948	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg19_v1_chr10_-_11574273_11574273	0.20002	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr2_-_26205437_26205444	0.19948	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr7_+_129015483_129015483	0.198847	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr2_-_160472960_160473079	0.198687	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg19_v1_chr6_-_134373618_134373788	0.198389	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v1_chr1_+_13911966_13911966	0.197018	SOX2.p2	NM_001006624|PDPN|10630|podoplanin	NM_001006625|PDPN|10630|podoplanin
hg19_v1_chrX_-_117119282_117119375	0.196924	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr1_+_15272414_15272414	0.196595	SOX2.p2	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg19_v1_chr21_-_32201926_32202050	0.195887	SOX2.p2	AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)
hg19_v1_chr9_-_126030854_126030923	0.195068	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chr22_-_27013959_27014007	0.194843	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg19_v1_chr2_-_38525527_38525611	0.193897	SOX2.p2	AK316179|ATL2|64225|atlastin GTPase 2
hg19_v1_chr15_+_52201590_52201630	0.19279	SOX2.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr18_-_52988916_52989089	0.192451	SOX2.p2	M74718|TCF4|6925|transcription factor 4	FR748220|TCF4|6925|transcription factor 4	FR748221|TCF4|6925|transcription factor 4	AK300038|TCF4|6925|transcription factor 4	NM_001243234|TCF4|6925|transcription factor 4	NM_001243235|TCF4|6925|transcription factor 4
hg19_v1_chr4_-_53617781_53617806	0.191661	SOX2.p2	NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1
hg19_v1_chr7_-_139876718_139877006	0.191441	SOX2.p2	AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
hg19_v1_chr4_+_146403955_146403962	0.1913	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg19_v1_chr4_+_166131170_166131187	0.190022	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr12_-_31477080_31477095	0.187218	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg19_v1_chr5_-_176836535_176836576	0.187153	SOX2.p2	AB095845|F12|2161|coagulation factor XII (Hageman factor)	NM_000505|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chr1_+_955609_955681	0.186468	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg19_v1_chr1_+_955468_955525	0.184709	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg19_v1_chr10_-_116444374_116444413	0.18422	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg19_v1_chr3_-_123339178_123339390	0.183679	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr18_-_53177999_53177999	0.182898	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr5_-_176836488_176836522	0.182855	SOX2.p2	M11723|F12|2161|coagulation factor XII (Hageman factor)	M31315|F12|2161|coagulation factor XII (Hageman factor)
hg19_v1_chr8_-_125579395_125579418	0.181562	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr12_-_24103842_24103866	0.179217	SOX2.p2	AK299607|SOX5|6660|SRY (sex determining region Y)-box 5	AK096569|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr9_-_117150217_117150363	0.178348	SOX2.p2	AY703041|AKNA|80709|AT-hook transcription factor	AY703042|AKNA|80709|AT-hook transcription factor	AK131082|AKNA|80709|AT-hook transcription factor	AK160382|AKNA|80709|AT-hook transcription factor	AB075848|AKNA|80709|AT-hook transcription factor
hg19_v1_chrX_-_128788913_128788932	0.178331	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg19_v1_chr9_-_124989755_124989864	0.175432	SOX2.p2	AM392697|LHX6|26468|LIM homeobox 6	AM393362|LHX6|26468|LIM homeobox 6	EU446700|LHX6|26468|LIM homeobox 6	AB031041|LHX6|26468|LIM homeobox 6	AB031042|LHX6|26468|LIM homeobox 6	AK313808|LHX6|26468|LIM homeobox 6	AK289827|LHX6|26468|LIM homeobox 6	NM_001242334|LHX6|26468|LIM homeobox 6
hg19_v1_chr3_+_111261039_111261095	0.173437	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg19_v1_chr1_+_9711781_9711828	0.1717	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg19_v1_chr5_+_140220811_140220906	0.171634	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg19_v1_chr2_+_85360373_85360946	0.170386	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v1_chr3_-_111314181_111314181	0.169236	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr2_-_113594325_113594364	0.169231	SOX2.p2	X56087|IL1B|3553|interleukin 1, beta	X02532|IL1B|3553|interleukin 1, beta	K02770|IL1B|3553|interleukin 1, beta	M54933|IL1B|3553|interleukin 1, beta	AK313983|IL1B|3553|interleukin 1, beta	BC008678|IL1B|3553|interleukin 1, beta	M15330|IL1B|3553|interleukin 1, beta	NM_000576|IL1B|3553|interleukin 1, beta
hg19_v1_chr3_+_136676706_136676955	0.168942	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg19_v1_chr17_+_36861857_36861924	0.168407	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v1_chr17_+_30814708_30814813	0.167942	SOX2.p2	
hg19_v1_chr1_-_153514096_153514240	0.16773	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg19_v1_chrX_-_33229428_33229672	0.167666	SOX2.p2	S60972|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg19_v1_chr7_-_37025696_37025745	0.167527	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr16_-_75529289_75529306	0.166812	SOX2.p2	
hg19_v1_chr10_-_14816895_14816895	0.16545	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr2_-_60780404_60780641	0.165033	SOX2.p2	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg19_v1_chr2_+_27665232_27665312	0.164162	SOX2.p2	BC101689|KRTCAP3|200634|keratinocyte associated protein 3	NM_001168364|KRTCAP3|200634|keratinocyte associated protein 3	NM_173853|KRTCAP3|200634|keratinocyte associated protein 3	BC101687|KRTCAP3|200634|keratinocyte associated protein 3	BC143574|KRTCAP3|200634|keratinocyte associated protein 3	AY157576|KRTCAP3|200634|keratinocyte associated protein 3	AY358993|KRTCAP3|200634|keratinocyte associated protein 3
hg19_v1_chrX_-_84634742_84634757	0.162024	SOX2.p2	AF309774|POF1B|79983|premature ovarian failure, 1B	NM_024921|POF1B|79983|premature ovarian failure, 1B
hg19_v1_chr18_+_11751470_11751561	0.161443	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chr4_+_95679075_95679138	0.160822	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg19_v1_chr18_+_55888838_55888862	0.160256	SOX2.p2	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr3_-_116164321_116164341	0.159766	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr6_+_13925423_13925463	0.159225	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg19_v1_chr10_+_11206928_11207010	0.15908	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr12_-_48963802_48963828	0.158737	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	HQ258062|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg19_v1_chr7_+_73245192_73245350	0.158313	SOX2.p2	NM_001305|CLDN4|1364|claudin 4	AK026651|CLDN4|1364|claudin 4	AK124076|CLDN4|1364|claudin 4	BC000671|CLDN4|1364|claudin 4	AB000712|CLDN4|1364|claudin 4
hg19_v1_chr9_+_2622134_2622188	0.157583	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr18_+_55888799_55888808	0.15757	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr9_+_2622099_2622126	0.156518	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr12_-_6740814_6740817	0.156103	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg19_v1_chr17_-_41623652_41623801	0.155708	SOX2.p2	AK315961|ETV4|2118|ets variant 4	U18018|ETV4|2118|ets variant 4	NM_001079675|ETV4|2118|ets variant 4
hg19_v1_chr12_-_54779482_54779586	0.155648	SOX2.p2	AB593085|ZNF385A|25946|zinc finger protein 385A	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg19_v1_chr2_-_26205327_26205367	0.155147	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr8_+_103563847_103563876	0.153488	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg19_v1_chr6_+_130339715_130339735	0.152347	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg19_v1_chr3_+_186648273_186648346	0.152052	SOX2.p2	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr2_+_203499667_203499712	0.151636	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chrX_+_152954965_152954965	0.151443	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg19_v1_chr13_-_75901897_75901948	0.1511	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr14_+_23305816_23305857	0.150659	SOX2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr4_-_139163222_139163506	0.150029	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr3_+_186648515_186648640	0.147915	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr2_+_206547131_206547226	0.14705	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg19_v1_chr11_-_119234628_119234857	0.146978	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr14_+_23305792_23305808	0.146066	SOX2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr1_-_217250230_217250311	0.145191	SOX2.p2	AB362218|ESRRG|2104|estrogen-related receptor gamma	AK131193|ESRRG|2104|estrogen-related receptor gamma	NM_001243507|ESRRG|2104|estrogen-related receptor gamma	NM_001243509|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr14_-_65409445_65409586	0.144591	SOX2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg19_v1_chr1_-_153044083_153044083	0.144398	SOX2.p2	NM_001017418|SPRR2B|6701|small proline-rich protein 2B
hg19_v1_chr5_+_121465214_121465277	0.144171	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg19_v1_chrY_-_21154560_21154979	0.143378	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr20_+_6748744_6748744	0.143018	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg19_v1_chrX_+_123234462_123234598	0.142749	SOX2.p2	AK026678|STAG2|10735|stromal antigen 2
hg19_v1_chr3_-_149051258_149051547	0.141598	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg19_v1_chr1_-_54871681_54871895	0.141198	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg19_v1_chr17_-_56494889_56494898	0.14041	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg19_v1_chr17_-_39743085_39743146	0.139966	SOX2.p2	BT007186|KRT14|3861|keratin 14	DQ890733|KRT14|3861|keratin 14	DQ892997|KRT14|3861|keratin 14	DQ893905|KRT14|3861|keratin 14	BC042437|KRT14|3861|keratin 14	BC002690|KRT14|3861|keratin 14	BC019097|KRT14|3861|keratin 14	BC094830|KRT14|3861|keratin 14	NM_000526|KRT14|3861|keratin 14
hg19_v1_chr2_-_110874142_110874142	0.139957	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chrX_-_15683153_15683153	0.139579	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chr16_-_75528925_75528925	0.138303	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg19_v1_chr21_+_43710190_43710237	0.138002	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg19_v1_chr8_+_28351694_28351837	0.137804	SOX2.p2	NM_017412|FZD3|7976|frizzled family receptor 3	NM_145866|FZD3|7976|frizzled family receptor 3	AK291480|FZD3|7976|frizzled family receptor 3	AB039723|FZD3|7976|frizzled family receptor 3
hg19_v1_chr15_-_59665069_59665072	0.135679	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr3_-_123339423_123339529	0.135651	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr14_+_23842017_23842327	0.135363	SOX2.p2	AF461739|IL25|64806|interleukin 25	NM_172314|IL25|64806|interleukin 25	AF305200|IL25|64806|interleukin 25	AY359127|IL25|64806|interleukin 25	NM_022789|IL25|64806|interleukin 25	BC104929|IL25|64806|interleukin 25	BC104931|IL25|64806|interleukin 25	AF458059|IL25|64806|interleukin 25	BC069565|IL25|64806|interleukin 25	EU831823|IL25|64806|interleukin 25	EU831900|IL25|64806|interleukin 25
hg19_v1_chr17_-_56492938_56493134	0.135029	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg19_v1_chr2_-_75788027_75788067	0.134954	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr15_+_80364902_80364950	0.134049	SOX2.p2	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6	AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6	AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr6_-_42419782_42419864	0.133821	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg19_v1_chr10_-_62149487_62149633	0.133551	SOX2.p2	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr1_-_6479880_6479980	0.133333	SOX2.p2	BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)	AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)	NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)
hg19_v1_chr18_-_53089722_53089722	0.132621	SOX2.p2	AK300612|TCF4|6925|transcription factor 4	NM_001243233|TCF4|6925|transcription factor 4
hg19_v1_chr6_+_13924676_13924676	0.132352	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg19_v1_chr13_-_99630243_99630337	0.132267	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chr1_-_116383692_116383748	0.132109	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg19_v1_chr17_+_57297827_57297970	0.131676	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v1_chr1_-_153013593_153013594	0.131627	SOX2.p2	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg19_v1_chr6_+_135502477_135502514	0.131497	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr5_-_16936290_16936367	0.130992	SOX2.p2	BC050682|MYO10|4651|myosin X	BC041694|MYO10|4651|myosin X	BC108736|MYO10|4651|myosin X	BC032669|MYO10|4651|myosin X
hg19_v1_chr9_+_117904096_117904096	0.130336	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg19_v1_chr11_+_22359666_22359666	0.128445	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg19_v1_chrX_-_32430370_32430370	0.128419	SOX2.p2	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg19_v1_chr17_-_56494930_56494959	0.127988	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg19_v1_chr7_-_96654128_96654261	0.126403	SOX2.p2	BC006226|DLX5|1749|distal-less homeobox 5	AK023493|DLX5|1749|distal-less homeobox 5	NM_005221|DLX5|1749|distal-less homeobox 5	AK297614|DLX5|1749|distal-less homeobox 5
hg19_v1_chr11_-_112034671_112034846	0.126206	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg19_v1_chr16_+_56817367_56817412	0.126094	SOX2.p2	AK294176|NUP93|9688|nucleoporin 93kDa	NM_001242796|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr2_+_102314162_102314542	0.125714	SOX2.p2	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr8_-_139926235_139926253	0.12455	SOX2.p2	AF406780|COL22A1|169044|collagen, type XXII, alpha 1	NM_152888|COL22A1|169044|collagen, type XXII, alpha 1
hg19_v1_chr11_+_10482677_10482686	0.123582	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg19_v1_chr6_+_135502521_135502651	0.123334	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr6_+_135502445_135502452	0.123226	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr6_-_111888520_111888520	0.122716	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg19_v1_chr10_+_102732285_102732285	0.121571	SOX2.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr9_+_124461365_124461648	0.121025	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chrX_-_84634664_84634728	0.120967	SOX2.p2	AK314295|POF1B|79983|premature ovarian failure, 1B	AK025039|POF1B|79983|premature ovarian failure, 1B	AK290360|POF1B|79983|premature ovarian failure, 1B	BC017500|POF1B|79983|premature ovarian failure, 1B
hg19_v1_chr17_+_30814552_30814643	0.120421	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr2_+_102615456_102615458	0.120374	SOX2.p2	BC027733|IL1R2|7850|interleukin 1 receptor, type II	BC012346|IL1R2|7850|interleukin 1 receptor, type II	NM_173343|IL1R2|7850|interleukin 1 receptor, type II
hg19_v1_chr10_+_74653338_74653529	0.119927	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg19_v1_chr20_-_14318200_14318312	0.119809	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg19_v1_chr1_-_16539103_16539165	0.119184	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg19_v1_chr17_+_73553883_73553887	0.11917	SOX2.p2	AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)
hg19_v1_chr15_+_52311408_52311431	0.118219	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr2_+_90211704_90211733	0.118164	SOX2.p2	
hg19_v1_chr15_+_52311438_52311484	0.117663	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr6_-_42110714_42110714	0.117617	SOX2.p2	NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132
hg19_v1_chr1_-_23342342_23342342	0.117405	SOX2.p2	NM_001242521|LOC729059|729059|uncharacterized LOC729059
hg19_v1_chr17_-_37764165_37764181	0.116966	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg19_v1_chr17_-_41623246_41623304	0.11658	SOX2.p2	BC016623|ETV4|2118|ets variant 4	AK290429|ETV4|2118|ets variant 4	AK299019|ETV4|2118|ets variant 4	AK312934|ETV4|2118|ets variant 4	NM_001986|ETV4|2118|ets variant 4
hg19_v1_chr8_-_87755880_87755944	0.116506	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg19_v1_chr2_-_110873638_110873650	0.115567	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr2_+_203499819_203499900	0.115161	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr4_-_72649734_72650078	0.114774	SOX2.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr9_-_126030792_126030848	0.114756	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chr1_+_86889768_86889930	0.114693	SOX2.p2	NM_006536|CLCA2|9635|chloride channel accessory 2	AF043977|CLCA2|9635|chloride channel accessory 2	AK290348|CLCA2|9635|chloride channel accessory 2	AK307937|CLCA2|9635|chloride channel accessory 2	BC041096|CLCA2|9635|chloride channel accessory 2	AB026833|CLCA2|9635|chloride channel accessory 2	AF127980|CLCA2|9635|chloride channel accessory 2
hg19_v1_chr22_-_46933066_46933162	0.114288	SOX2.p2	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
hg19_v1_chr11_+_128563772_128563824	0.114227	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr13_-_76055872_76056805	0.114084	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr3_+_132757216_132757252	0.114026	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg19_v1_chr11_+_36317724_36317837	0.113857	SOX2.p2	NM_001160167|PRR5L|79899|proline rich 5 like	AK055042|PRR5L|79899|proline rich 5 like
hg19_v1_chrX_+_41548225_41548310	0.11371	SOX2.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg19_v1_chr14_+_77648082_77648102	0.113637	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg19_v1_chr18_+_55888750_55888774	0.113078	SOX2.p2	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr9_-_140196702_140196738	0.11289	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg19_v1_chr15_-_73661141_73661273	0.112328	SOX2.p2	AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v1_chr8_-_20040612_20040716	0.112316	SOX2.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg19_v1_chr1_+_43855599_43855639	0.111938	SOX2.p2	BC051343|SZT2|23334|seizure threshold 2 homolog (mouse)	AK091821|SZT2|23334|seizure threshold 2 homolog (mouse)
hg19_v1_chr11_-_18062304_18062334	0.111567	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg19_v1_chr14_+_32798478_32798595	0.111528	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg19_v1_chr2_+_148602050_148602184	0.110722	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr6_-_91006460_91006563	0.110268	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v1_chr2_+_207804277_207804323	0.109104	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg19_v1_chr18_+_61254533_61254662	0.10844	SOX2.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg19_v1_chrX_-_110655384_110655459	0.107736	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr7_-_16844606_16844737	0.107418	SOX2.p2	BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)
hg19_v1_chr3_+_111260925_111261007	0.107298	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg19_v1_chr6_+_106546736_106546873	0.106574	SOX2.p2	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain	EF151143|PRDM1|639|PR domain containing 1, with ZNF domain
hg19_v1_chr15_-_41836458_41836471	0.106084	SOX2.p2	AK022794|RPAP1|26015|RNA polymerase II associated protein 1	NM_015540|RPAP1|26015|RNA polymerase II associated protein 1	AK308884|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr4_+_71494460_71494460	0.105999	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg19_v1_chr7_+_139528951_139529234	0.105661	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg19_v1_chr12_+_20848288_20848702	0.105487	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr13_-_25745620_25745701	0.105399	SOX2.p2	AK098343|FAM123A|219287|family with sequence similarity 123A	BC032653|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chr16_+_69141442_69141442	0.105012	SOX2.p2	AF234839|HAS3|3038|hyaluronan synthase 3	NM_005329|HAS3|3038|hyaluronan synthase 3
hg19_v1_chr8_+_80523376_80523431	0.104746	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg19_v1_chr8_-_95449131_95449179	0.104731	SOX2.p2	AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg19_v1_chr2_+_106432922_106433029	0.104346	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg19_v1_chr6_+_15246299_15246526	0.104332	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr11_+_130184326_130184418	0.104175	SOX2.p2	AK091840|FLJ34521|646383|uncharacterized LOC646383
hg19_v1_chr6_-_47253962_47254003	0.103923	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_+_955536_955550	0.103611	SOX2.p2	
hg19_v1_chr7_+_107110501_107110504	0.103519	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chr11_-_79151694_79151755	0.103317	SOX2.p2	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)
hg19_v1_chr6_-_91006580_91006644	0.102953	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v1_chr4_-_47983430_47983549	0.102836	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr1_-_51887740_51887792	0.1027	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr11_-_119599253_119599512	0.102401	SOX2.p2	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v1_chr5_-_137475076_137475131	0.102217	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr8_-_110346272_110346470	0.101728	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg19_v1_chr11_+_128563993_128564117	0.101117	SOX2.p2	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr8_+_86376130_86376310	0.100968	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	AF015039|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg19_v1_chr1_-_117210301_117210466	0.100737	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr8_+_74207093_74207445	0.100699	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg19_v1_chr18_-_52969714_52969851	0.100681	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr15_+_52311432_52311436	0.100492	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr1_-_12677347_12677819	0.100337	SOX2.p2	DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3
hg19_v1_chr18_-_24128499_24128522	0.100275	SOX2.p2	NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1
hg19_v1_chr11_-_72385411_72385496	0.0997766	SOX2.p2	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr19_-_49865638_49865713	0.0995128	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg19_v1_chr5_+_140180782_140180782	0.0994389	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg19_v1_chr1_-_153085963_153085988	0.0994287	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg19_v1_chr3_+_132757170_132757204	0.0989159	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg19_v1_chr9_+_116638544_116638655	0.0972873	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg19_v1_chr5_+_68800003_68800071	0.0972493	SOX2.p2	NM_001205255|OCLN|100506658|occludin	FJ786083|OCLN|100506658|occludin	FJ786084|OCLN|100506658|occludin	GQ225096|OCLN|100506658|occludin	GQ225097|OCLN|100506658|occludin	GQ225098|OCLN|100506658|occludin	GQ402517|OCLN|100506658|occludin	DQ892423|OCLN|100506658|occludin	DQ895637|OCLN|100506658|occludin	AB451306|OCLN|100506658|occludin	AB451437|OCLN|100506658|occludin
hg19_v1_chr22_+_23522743_23522858	0.097156	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg19_v1_chr15_+_94841429_94841494	0.0968362	SOX2.p2	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2	NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2	AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2	BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2
hg19_v1_chr10_-_99094427_99094479	0.0966886	SOX2.p2	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg19_v1_chr17_-_39280377_39280418	0.0963697	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg19_v1_chr10_+_134210691_134210727	0.0963145	SOX2.p2	NM_001098637|PWWP2B|170394|PWWP domain containing 2B	NM_138499|PWWP2B|170394|PWWP domain containing 2B	BC068574|PWWP2B|170394|PWWP domain containing 2B
hg19_v1_chr8_+_80523304_80523313	0.0962131	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg19_v1_chr2_-_74781061_74781087	0.0961993	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg19_v1_chr18_+_55862577_55862884	0.0961193	SOX2.p2	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr14_+_23305907_23305912	0.0957975	SOX2.p2	X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr1_+_87797371_87797459	0.0954293	SOX2.p2	BC065818|LMO4|8543|LIM domain only 4
hg19_v1_chr1_-_156051788_156051809	0.0944905	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr12_-_71003622_71003623	0.0943877	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg19_v1_chr8_+_75736771_75736771	0.0941632	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg19_v1_chr11_-_123524881_123525042	0.0941564	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr11_-_85425790_85425790	0.0941229	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr2_+_62934030_62934031	0.093487	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg19_v1_chr11_+_128563973_128563988	0.0933557	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr2_-_100722328_100722589	0.0932813	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr8_+_80523339_80523339	0.0931611	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg19_v1_chr11_-_72380107_72380107	0.0930113	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr8_-_33424642_33424684	0.0929578	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg19_v1_chr6_-_29012951_29013016	0.0920983	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg19_v1_chr5_+_34687663_34687663	0.0913614	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_+_32739711_32739969	0.0912151	SOX2.p2	NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase	BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase	AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase	U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase	DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase	DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase	AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase	AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase
hg19_v1_chr4_-_87028805_87028805	0.0910174	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr15_-_34659245_34659915	0.0901205	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr19_+_11071792_11071856	0.0901184	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr3_-_57530067_57530070	0.0897515	SOX2.p2	AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12
hg19_v1_chr19_+_11071583_11071709	0.0894732	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr6_+_4776826_4777016	0.0891703	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg19_v1_chr7_-_25268057_25268104	0.0891562	SOX2.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg19_v1_chr5_-_78809658_78809699	0.0890286	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg19_v1_chr8_-_110693233_110693233	0.0889532	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr15_-_70390226_70390228	0.0889429	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr3_-_33700932_33701071	0.0888527	SOX2.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr22_+_45072936_45073004	0.0885019	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg19_v1_chr11_+_124120422_124120422	0.08842	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg19_v1_chr22_+_23522699_23522728	0.0883687	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg19_v1_chr18_-_3874688_3874766	0.0879983	SOX2.p2	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr19_-_44143943_44144031	0.0878286	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg19_v1_chr12_+_48876285_48876285	0.0877775	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg19_v1_chr19_-_43098980_43099081	0.0875758	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg19_v1_chr3_+_14444083_14444149	0.087468	SOX2.p2	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr4_-_87281177_87281215	0.0874203	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr21_-_32185560_32185569	0.087323	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg19_v1_chr10_-_5446781_5446796	0.0872365	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr19_+_11071719_11071781	0.0870288	SOX2.p2	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr3_+_113616317_113616402	0.0870209	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chrX_-_114252132_114252216	0.0864462	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chr12_+_50478942_50479032	0.0861395	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr4_+_41614911_41614927	0.0859441	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr17_-_41739261_41739289	0.0858789	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr21_+_37442221_37442285	0.0858399	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1
hg19_v1_chr15_-_33360084_33360387	0.0857898	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr4_+_113970784_113970884	0.0855995	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr6_-_17987693_17987827	0.085473	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A
hg19_v1_chr2_+_105471745_105472051	0.0853855	SOX2.p2	NM_006236|POU3F3|5455|POU class 3 homeobox 3
hg19_v1_chr1_-_183559463_183559654	0.0850249	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr8_-_17580024_17580083	0.0848193	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr10_+_123923104_123923358	0.0847171	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr7_+_18535351_18535448	0.0845026	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_001204145|HDAC9|9734|histone deacetylase 9	NM_001204146|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg19_v1_chr10_+_114043413_114043492	0.0842392	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	HQ258194|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg19_v1_chr11_+_57529233_57529445	0.0839702	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chrX_-_24665225_24665425	0.0839324	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr6_+_50681256_50681256	0.0838943	SOX2.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg19_v1_chr11_-_117747331_117747447	0.0837349	SOX2.p2	AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6	AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6	AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr4_+_15480833_15480865	0.0837002	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr19_+_11071713_11071718	0.0835811	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr8_-_8750739_8751137	0.083393	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg19_v1_chr2_+_75059781_75059781	0.0832289	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg19_v1_chr17_+_48348766_48348766	0.0831668	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg19_v1_chr2_+_70142152_70142235	0.0830864	SOX2.p2	NM_001202513|MXD1|4084|MAX dimerization protein 1	NM_001202514|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1	BC098396|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr12_+_54426831_54426902	0.0828436	SOX2.p2	NM_018953|HOXC5|3222|homeobox C5
hg19_v1_chr4_+_146402704_146403061	0.0828243	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg19_v1_chr1_+_202183282_202183282	0.0825343	SOX2.p2	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v1_chr4_+_71263598_71263692	0.0825209	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg19_v1_chr2_-_166060552_166060603	0.0822879	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr4_+_78078394_78078526	0.0821518	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg19_v1_chr22_+_23522551_23522690	0.0821257	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg19_v1_chr1_-_31712733_31712737	0.0820158	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chr16_-_4322695_4322961	0.0819758	SOX2.p2	X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chrX_+_78003205_78003212	0.0819248	SOX2.p2	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4	AK314134|LPAR4|2846|lysophosphatidic acid receptor 4
hg19_v1_chr11_-_71752099_71752188	0.0817445	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr3_-_48229328_48229528	0.0816832	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg19_v1_chr12_-_24715349_24715382	0.081662	SOX2.p2	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr8_-_66753968_66753968	0.0816361	SOX2.p2	NM_001242318|PDE7A|5150|phosphodiesterase 7A
hg19_v1_chr18_+_56530677_56531034	0.0813674	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr13_-_53422773_53422778	0.0808246	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8
hg19_v1_chr18_-_53257033_53257044	0.0807985	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr18_-_29340698_29340842	0.080525	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg19_v1_chr2_-_72374919_72374965	0.0805245	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v1_chr8_+_102504661_102504669	0.0802917	SOX2.p2	NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr20_+_9458460_9458567	0.0802425	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr6_-_99797530_99797530	0.0798536	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg19_v1_chr2_-_75788079_75788102	0.0795738	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr12_-_67072752_67072761	0.0794447	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr17_-_4458618_4458730	0.0794148	SOX2.p2	EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a	BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a	AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a	AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a	AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a	AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a
hg19_v1_chr22_+_21271721_21271722	0.0792843	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr5_+_35856990_35857077	0.0792818	SOX2.p2	BC020717|IL7R|3575|interleukin 7 receptor	FJ529208|IL7R|3575|interleukin 7 receptor	NM_002185|IL7R|3575|interleukin 7 receptor	AK301220|IL7R|3575|interleukin 7 receptor	BC067537|IL7R|3575|interleukin 7 receptor	BC067538|IL7R|3575|interleukin 7 receptor	BC067539|IL7R|3575|interleukin 7 receptor	BC067540|IL7R|3575|interleukin 7 receptor	BC069999|IL7R|3575|interleukin 7 receptor	M29696|IL7R|3575|interleukin 7 receptor	AK315251|IL7R|3575|interleukin 7 receptor
hg19_v1_chr15_+_77287428_77287553	0.0790609	SOX2.p2	AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr7_-_122339186_122339209	0.0786656	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg19_v1_chr12_+_50479033_50479194	0.0784228	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr18_-_13915534_13915538	0.0782363	SOX2.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v1_chr20_+_17207596_17207625	0.0781682	SOX2.p2	NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr2_+_162272892_162272921	0.0781065	SOX2.p2	U49250|TBR1|10716|T-box, brain, 1	HQ258587|TBR1|10716|T-box, brain, 1
hg19_v1_chr11_+_100862719_100862810	0.0780124	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg19_v1_chr11_+_60691911_60691959	0.0779866	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg19_v1_chr1_+_28261503_28261620	0.0776862	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v1_chr6_+_112375277_112375558	0.0775648	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg19_v1_chr14_-_71275732_71275887	0.077538	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg19_v1_chr2_-_9143742_9143901	0.077223	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg19_v1_chr12_-_16757944_16758080	0.0767324	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr2_-_238499317_238499375	0.076516	SOX2.p2	BC009827|RAB17|64284|RAB17, member RAS oncogene family	BC050426|RAB17|64284|RAB17, member RAS oncogene family	AL136645|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr17_-_29624249_29624379	0.0763967	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg19_v1_chr19_-_6767417_6767598	0.076345	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg19_v1_chr15_+_74908195_74908248	0.0762997	SOX2.p2	AK293769|CLK3|1198|CDC-like kinase 3	BC019881|CLK3|1198|CDC-like kinase 3	CR933693|CLK3|1198|CDC-like kinase 3	AK291983|CLK3|1198|CDC-like kinase 3	AK301689|CLK3|1198|CDC-like kinase 3	BC002555|CLK3|1198|CDC-like kinase 3	AK225680|CLK3|1198|CDC-like kinase 3	BC006103|CLK3|1198|CDC-like kinase 3
hg19_v1_chr17_-_10452939_10453016	0.0760958	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg19_v1_chr7_-_11871735_11871844	0.0760533	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chrX_+_152912655_152912826	0.0760359	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr2_+_171571800_171571917	0.0758603	SOX2.p2	NM_001003845|SP5|389058|Sp5 transcription factor	AB096175|SP5|389058|Sp5 transcription factor
hg19_v1_chr17_-_27467395_27467428	0.0757368	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg19_v1_chr7_-_16921596_16921612	0.0756591	SOX2.p2	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)	NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)
hg19_v1_chr15_+_77287688_77287725	0.0755161	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr8_+_80523048_80523048	0.0752729	SOX2.p2	NM_001199214|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2
hg19_v1_chr1_-_217311095_217311096	0.0752117	SOX2.p2	CR749497|ESRRG|2104|estrogen-related receptor gamma	BX647076|ESRRG|2104|estrogen-related receptor gamma	NM_001134285|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr1_+_171154387_171154457	0.0746273	SOX2.p2	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)
hg19_v1_chr22_+_31477231_31477334	0.0739984	SOX2.p2	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg19_v1_chr4_-_87281374_87281374	0.0735589	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr6_-_29527701_29527701	0.0734871	SOX2.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg19_v1_chr14_-_35344450_35344488	0.0734758	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr1_+_100111430_100111704	0.0733861	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin
hg19_v1_chr12_-_16759531_16759536	0.0733377	SOX2.p2	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr11_+_57365026_57365209	0.0731879	SOX2.p2	NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr12_+_70759974_70760559	0.0731211	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr11_-_118095708_118095808	0.0730238	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr22_-_26875376_26875550	0.0729835	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg19_v1_chr14_+_23305913_23306026	0.0719715	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr9_-_86584079_86584113	0.0718147	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr2_+_166428845_166428854	0.0715395	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr8_-_125580745_125580777	0.0714811	SOX2.p2	AF116674|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr7_-_92463211_92463230	0.0712704	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg19_v1_chr9_+_137218324_137218477	0.0712602	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha	HQ692843|RXRA|6256|retinoid X receptor, alpha
hg19_v1_chr12_-_28122884_28123047	0.0710664	SOX2.p2	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	M26960|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg19_v1_chr18_-_53255361_53255479	0.0708415	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg19_v1_chr13_+_96085852_96085857	0.0707901	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chrX_-_24665454_24665465	0.0707535	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr17_-_39942937_39943029	0.0707206	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg19_v1_chr1_-_40367539_40367686	0.0706448	SOX2.p2	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg19_v1_chr1_+_93544786_93544881	0.0704264	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg19_v1_chrX_+_15518899_15519039	0.0704226	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr14_+_91580467_91580558	0.0702174	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr19_+_9296269_9296269	0.0701565	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg19_v1_chrX_+_48916515_48916551	0.0700508	SOX2.p2	BC008769|CCDC120|90060|coiled-coil domain containing 120	NM_001163322|CCDC120|90060|coiled-coil domain containing 120	NM_033626|CCDC120|90060|coiled-coil domain containing 120	NM_001163321|CCDC120|90060|coiled-coil domain containing 120	NM_001163323|CCDC120|90060|coiled-coil domain containing 120	AK315837|CCDC120|90060|coiled-coil domain containing 120	AK294024|CCDC120|90060|coiled-coil domain containing 120	AK300366|CCDC120|90060|coiled-coil domain containing 120	AK293898|CCDC120|90060|coiled-coil domain containing 120
hg19_v1_chr19_+_45281125_45281187	0.0699068	SOX2.p2	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c
hg19_v1_chr11_-_83393436_83393467	0.0696551	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr5_-_16936371_16936400	0.0695291	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg19_v1_chr4_+_88571453_88571458	0.0694415	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr14_+_91580713_91580785	0.0692792	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr6_-_29527477_29527510	0.0692053	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg19_v1_chr3_-_192635933_192635949	0.0690567	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr6_+_84569427_84569501	0.0688924	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr20_+_62328002_62328021	0.0688562	SOX2.p2	NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v1_chrX_+_147582133_147582243	0.068736	SOX2.p2	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg19_v1_chr15_+_75074417_75074433	0.0687038	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase
hg19_v1_chr11_+_61248584_61248652	0.0686184	SOX2.p2	NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32
hg19_v1_chr19_-_42931500_42931577	0.0685849	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg19_v1_chr3_+_111717585_111717829	0.0685096	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chr10_+_111969988_111969988	0.0684522	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg19_v1_chr2_-_110873353_110873457	0.0680398	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr16_-_4323000_4323025	0.0680079	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chr15_-_74726000_74726058	0.0679928	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v1_chr2_+_153191830_153192116	0.0678861	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg19_v1_chr7_-_27205148_27205160	0.0676337	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg19_v1_chr19_-_47734215_47734476	0.0675007	SOX2.p2	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg19_v1_chr4_+_699529_699731	0.0672118	SOX2.p2	AK225892|PCGF3|10336|polycomb group ring finger 3	NM_006315|PCGF3|10336|polycomb group ring finger 3	AK057124|PCGF3|10336|polycomb group ring finger 3	AK300290|PCGF3|10336|polycomb group ring finger 3	AK125801|PCGF3|10336|polycomb group ring finger 3
hg19_v1_chrX_+_152908819_152908931	0.0671777	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr17_-_48072566_48072590	0.0671063	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg19_v1_chr7_+_26191732_26192135	0.0670904	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg19_v1_chr8_+_107460151_107460151	0.0667238	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr17_-_26879645_26879659	0.0665239	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	AB593014|UNC119|9094|unc-119 homolog (C. elegans)
hg19_v1_chr18_-_53255734_53255861	0.0660687	SOX2.p2	FR748216|TCF4|6925|transcription factor 4	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_001243230|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg19_v1_chr4_-_186877413_186877531	0.0659793	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr2_+_189157551_189157612	0.065979	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr12_-_106532447_106532918	0.065928	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr10_-_98031154_98031332	0.0658369	SOX2.p2	AM180327|BLNK|29760|B-cell linker	AM180328|BLNK|29760|B-cell linker	AM180329|BLNK|29760|B-cell linker	AM180330|BLNK|29760|B-cell linker	AM180331|BLNK|29760|B-cell linker	AM180332|BLNK|29760|B-cell linker	AM180333|BLNK|29760|B-cell linker	AM180334|BLNK|29760|B-cell linker	AM180335|BLNK|29760|B-cell linker	AM180336|BLNK|29760|B-cell linker	AM180337|BLNK|29760|B-cell linker	AM180338|BLNK|29760|B-cell linker	AM180339|BLNK|29760|B-cell linker	AM180340|BLNK|29760|B-cell linker	AM180341|BLNK|29760|B-cell linker	AM180342|BLNK|29760|B-cell linker	AM180343|BLNK|29760|B-cell linker	AM180344|BLNK|29760|B-cell linker	AM180345|BLNK|29760|B-cell linker	AM180346|BLNK|29760|B-cell linker	BC018906|BLNK|29760|B-cell linker	BC110298|BLNK|29760|B-cell linker	AK027779|BLNK|29760|B-cell linker	AF068180|BLNK|29760|B-cell linker	AF068181|BLNK|29760|B-cell linker	AK225546|BLNK|29760|B-cell linker	NM_001114094|BLNK|29760|B-cell linker	NM_013314|BLNK|29760|B-cell linker
hg19_v1_chr16_-_90085786_90086013	0.0658287	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg19_v1_chr5_+_170736287_170736369	0.0655991	SOX2.p2	BC017291|TLX3|30012|T-cell leukemia homeobox 3	NM_021025|TLX3|30012|T-cell leukemia homeobox 3	DQ892654|TLX3|30012|T-cell leukemia homeobox 3	DQ895893|TLX3|30012|T-cell leukemia homeobox 3	DQ896085|TLX3|30012|T-cell leukemia homeobox 3
hg19_v1_chr6_+_122720750_122720882	0.0654096	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr1_+_202163117_202163232	0.0653675	SOX2.p2	NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v1_chr14_-_57272344_57272383	0.0652948	SOX2.p2	NM_172337|OTX2|5015|orthodenticle homeobox 2	AB593056|OTX2|5015|orthodenticle homeobox 2
hg19_v1_chr8_-_86253863_86253942	0.065269	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg19_v1_chrX_+_106449861_106449861	0.0651172	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg19_v1_chr3_+_3841079_3841120	0.0650185	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg19_v1_chr4_-_40516567_40516601	0.0649478	SOX2.p2	BX648404|RBM47|54502|RNA binding motif protein 47	AF262323|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr14_-_24036939_24037064	0.0649217	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr4_+_102734982_102735035	0.0647956	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg19_v1_chr11_-_115088628_115088669	0.0647454	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr14_-_24777160_24777176	0.0646278	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr6_+_157099873_157099878	0.0645903	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg19_v1_chr21_+_37442298_37442413	0.0645598	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr10_+_98740987_98741147	0.0644573	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg19_v1_chr18_-_3874252_3874316	0.0643472	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr3_+_39509069_39509170	0.0642653	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg19_v1_chr6_+_43737937_43738099	0.0641537	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_001204384|VEGFA|7422|vascular endothelial growth factor A	NM_001204385|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr14_-_24037266_24037278	0.0641058	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr3_-_124930192_124930242	0.0640885	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr11_+_93862143_93862159	0.0637989	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr12_-_57400199_57400304	0.063775	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg19_v1_chrX_+_102965836_102965836	0.063676	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg19_v1_chr5_-_148442606_148442736	0.0634306	SOX2.p2	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2
hg19_v1_chr2_+_234959345_234959430	0.0633065	SOX2.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg19_v1_chr2_-_31637553_31637590	0.0632407	SOX2.p2	U39487|XDH|7498|xanthine dehydrogenase	D11456|XDH|7498|xanthine dehydrogenase	U06117|XDH|7498|xanthine dehydrogenase
hg19_v1_chr3_+_46283871_46283962	0.0631325	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg19_v1_chr6_+_4776641_4776679	0.0630277	SOX2.p2	AK291601|CDYL|9425|chromodomain protein, Y-like	BC108725|CDYL|9425|chromodomain protein, Y-like	NM_004824|CDYL|9425|chromodomain protein, Y-like
hg19_v1_chr1_-_183559669_183559758	0.0630244	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr17_-_74639719_74639893	0.0629427	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg19_v1_chr3_+_142342265_142342343	0.0628855	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr6_-_10415438_10415499	0.0628513	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr11_-_64727608_64727608	0.0627876	SOX2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg19_v1_chr12_-_9268475_9268511	0.0627669	SOX2.p2	M11313|A2M|2|alpha-2-macroglobulin	BC040071|A2M|2|alpha-2-macroglobulin	AY591530|A2M|2|alpha-2-macroglobulin
hg19_v1_chr10_+_11047253_11047262	0.0625886	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr15_+_75074714_75074998	0.0624192	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg19_v1_chr6_-_133035180_133035196	0.0623381	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg19_v1_chr16_-_75529278_75529281	0.0622961	SOX2.p2	
hg19_v1_chr3_-_135913276_135913309	0.0621183	SOX2.p2	AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)	NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)
hg19_v1_chr2_-_203776200_203776429	0.0619427	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg19_v1_chr4_-_69111333_69111411	0.061903	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg19_v1_chr4_-_77328457_77328457	0.0618841	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg19_v1_chr12_+_45686465_45686465	0.0618526	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg19_v1_chr14_-_21572789_21572862	0.0615492	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg19_v1_chr6_-_17987852_17987880	0.0614236	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_001243423|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg19_v1_chr11_+_128564130_128564154	0.0613944	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr19_-_14260728_14260872	0.0612261	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg19_v1_chr15_+_69606741_69606741	0.0611783	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr3_+_148583042_148583094	0.0611657	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg19_v1_chr6_-_24583454_24583454	0.0611379	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chrX_-_138914384_138914446	0.0610578	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg19_v1_chr13_+_52158483_52158591	0.0609661	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg19_v1_chr2_-_1926501_1926602	0.0608424	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg19_v1_chr7_+_115850546_115850760	0.0608143	SOX2.p2	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg19_v1_chr12_-_71148331_71148370	0.0607603	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr15_-_52043649_52043781	0.0607517	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v1_chr8_-_80679897_80680097	0.0604602	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg19_v1_chr2_+_181845803_181845852	0.0604048	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr1_-_207095198_207095377	0.0603762	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg19_v1_chr15_-_70390229_70390258	0.0603237	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v1_chr12_-_91452130_91452130	0.059789	SOX2.p2	NM_007035|KERA|11081|keratocan
hg19_v1_chr1_+_66458389_66458417	0.0597534	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr13_+_78109808_78109894	0.0596043	SOX2.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr18_-_48724031_48724050	0.0595927	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr3_-_192635627_192635646	0.0593848	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr10_+_115511212_115511212	0.0592502	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chr12_-_11508509_11508524	0.0591952	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg19_v1_chr4_+_15429628_15429667	0.0589979	SOX2.p2	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chrX_+_107288199_107288320	0.058982	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chr15_+_74907334_74907334	0.0589677	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg19_v1_chr14_-_24777153_24777155	0.0589443	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr9_+_4839763_4839773	0.0588805	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg19_v1_chr12_-_71148063_71148236	0.0588676	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr2_+_27070962_27071291	0.058855	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5
hg19_v1_chr11_-_47207425_47207431	0.0587923	SOX2.p2	AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3
hg19_v1_chr18_+_29078026_29078260	0.0586953	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg19_v1_chrX_+_65384078_65384206	0.0586798	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr15_-_45493372_45493372	0.0586742	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg19_v1_chr2_+_70056773_70056841	0.0585294	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr6_+_122720685_122720706	0.0584796	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_001243094|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr15_-_72598655_72598655	0.0584526	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg19_v1_chr1_+_2036154_2036154	0.0584177	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr5_+_125967405_125967426	0.0582479	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48	HQ258080|C5orf48|389320|chromosome 5 open reading frame 48
hg19_v1_chrX_-_55057408_55057496	0.058221	SOX2.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr14_+_91580967_91581087	0.0581144	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr21_-_31538970_31539043	0.0580849	SOX2.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg19_v1_chr1_+_87794548_87794570	0.0580353	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg19_v1_chr17_-_44895962_44896081	0.0580302	SOX2.p2	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3	BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3	AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3	NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3
hg19_v1_chr21_-_33074101_33074136	0.0578874	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr13_+_113656076_113656223	0.0578544	SOX2.p2	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr1_+_29241002_29241160	0.0576757	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg19_v1_chr7_-_128550761_128550772	0.0575842	SOX2.p2	AK122706|KCP|375616|kielin/chordin-like protein	NM_001135914|KCP|375616|kielin/chordin-like protein	NM_199349|KCP|375616|kielin/chordin-like protein
hg19_v1_chr2_+_232573249_232573416	0.0575527	SOX2.p2	BC098420|PTMA|5757|prothymosin, alpha	BC070480|PTMA|5757|prothymosin, alpha	BC003510|PTMA|5757|prothymosin, alpha	BC051265|PTMA|5757|prothymosin, alpha	BC071879|PTMA|5757|prothymosin, alpha	BC071647|PTMA|5757|prothymosin, alpha	M26708|PTMA|5757|prothymosin, alpha	M14483|PTMA|5757|prothymosin, alpha	BC066905|PTMA|5757|prothymosin, alpha	M14794|PTMA|5757|prothymosin, alpha	DQ892963|PTMA|5757|prothymosin, alpha	DQ896210|PTMA|5757|prothymosin, alpha	AF348514|PTMA|5757|prothymosin, alpha	AY169282|PTMA|5757|prothymosin, alpha
hg19_v1_chr17_-_56406120_56406151	0.0573353	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg19_v1_chr8_-_28347733_28347826	0.0572908	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16
hg19_v1_chr11_-_123756339_123756339	0.057276	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg19_v1_chr14_-_99737821_99737959	0.0572149	SOX2.p2	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v1_chr10_-_127371593_127371712	0.0572043	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg19_v1_chr22_+_21271723_21271939	0.0571071	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr19_-_15590203_15590316	0.0570233	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg19_v1_chr12_-_16760935_16761147	0.0568879	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr17_-_41738901_41738930	0.0567507	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr4_+_78078332_78078391	0.0565377	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg19_v1_chr18_-_74729049_74729086	0.0564334	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg19_v1_chr11_+_100557851_100558406	0.056429	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg19_v1_chr12_-_10251520_10251663	0.0563817	SOX2.p2	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg19_v1_chrX_+_64708614_64708705	0.0563527	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg19_v1_chr12_-_16758839_16758903	0.0563154	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chrX_-_10645726_10645787	0.0562562	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr12_+_50898744_50898767	0.0561569	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v1_chr10_+_70939980_70940050	0.0559207	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg19_v1_chr12_-_71148383_71148538	0.0558928	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr3_-_116164363_116164384	0.0558685	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr5_+_70944968_70945006	0.0557746	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg19_v1_chr8_+_32579350_32579435	0.0557434	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg19_v1_chr18_-_48723689_48723736	0.0557057	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr4_-_103266577_103266692	0.0556714	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr1_+_200860619_200860674	0.0555851	SOX2.p2	NM_018265|C1orf106|55765|chromosome 1 open reading frame 106	AK001583|C1orf106|55765|chromosome 1 open reading frame 106	AK001763|C1orf106|55765|chromosome 1 open reading frame 106	BC106877|C1orf106|55765|chromosome 1 open reading frame 106
hg19_v1_chr17_+_37784750_37784773	0.0554822	SOX2.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg19_v1_chr7_+_129984629_129984700	0.0554808	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg19_v1_chr1_-_44482996_44483011	0.0553904	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr2_+_1418179_1418180	0.0553848	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg19_v1_chr11_+_7273141_7273246	0.0553444	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg19_v1_chr3_+_160394946_160394964	0.0551825	SOX2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg19_v1_chr12_-_16759430_16759432	0.0551117	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr8_+_80523351_80523367	0.0550171	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2
hg19_v1_chr1_-_161015752_161015783	0.0549614	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg19_v1_chr12_+_9142136_9142231	0.0549026	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg19_v1_chr6_-_52628272_52628360	0.0548945	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg19_v1_chr6_+_43738177_43738318	0.0547331	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr12_+_104850986_104851188	0.0546575	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v1_chr4_-_153456152_153456436	0.0545898	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr10_+_99349354_99349483	0.0545849	SOX2.p2	AM393165|C10orf62|414157|chromosome 10 open reading frame 62	AM393183|C10orf62|414157|chromosome 10 open reading frame 62	AM393504|C10orf62|414157|chromosome 10 open reading frame 62	AM393792|C10orf62|414157|chromosome 10 open reading frame 62	NM_001009997|C10orf62|414157|chromosome 10 open reading frame 62	BC037252|C10orf62|414157|chromosome 10 open reading frame 62
hg19_v1_chr4_+_41540320_41540334	0.0543717	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr16_-_4987056_4987152	0.0543451	SOX2.p2	AF013717|PPL|5493|periplakin	BC114620|PPL|5493|periplakin	AF001691|PPL|5493|periplakin	NM_002705|PPL|5493|periplakin
hg19_v1_chr2_-_238499713_238499768	0.0543388	SOX2.p2	BC023661|RAB17|64284|RAB17, member RAS oncogene family	AK225423|RAB17|64284|RAB17, member RAS oncogene family	AK022600|RAB17|64284|RAB17, member RAS oncogene family	NM_022449|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr8_+_21777216_21777281	0.0542399	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr10_+_11207053_11207140	0.0540558	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr11_+_63137260_63137528	0.0539739	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg19_v1_chr3_-_48470715_48471045	0.0539721	SOX2.p2	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg19_v1_chr1_+_87794576_87794787	0.0539623	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr21_+_30517897_30517923	0.0539331	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg19_v1_chr7_-_104909442_104909525	0.0538439	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr5_+_54398473_54398510	0.0537538	SOX2.p2	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg19_v1_chr1_-_161015688_161015746	0.0536457	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg19_v1_chr17_-_46655544_46655742	0.0534966	SOX2.p2	AL137449|HOXB4|3214|homeobox B4	BC049204|HOXB4|3214|homeobox B4	NM_024015|HOXB4|3214|homeobox B4
hg19_v1_chr6_-_47254143_47254220	0.0534907	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr19_-_46272102_46272128	0.0534746	SOX2.p2	
hg19_v1_chr9_-_130712866_130712997	0.0534606	SOX2.p2	BC137087|FAM102A|399665|family with sequence similarity 102, member A	BC137088|FAM102A|399665|family with sequence similarity 102, member A	BC047949|FAM102A|399665|family with sequence similarity 102, member A	NM_203305|FAM102A|399665|family with sequence similarity 102, member A	BC142952|FAM102A|399665|family with sequence similarity 102, member A
hg19_v1_chr20_+_55108265_55108301	0.0532253	SOX2.p2	BC014951|FAM209B|388799|family with sequence similarity 209, member B	NM_001013646|FAM209B|388799|family with sequence similarity 209, member B
hg19_v1_chr6_+_26365397_26365508	0.053198	SOX2.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr14_-_88793250_88793255	0.0531689	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr6_+_14117486_14117486	0.0530715	SOX2.p2	NM_001251901|CD83|9308|CD83 molecule
hg19_v1_chr6_+_125474800_125475079	0.0528417	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg19_v1_chr12_+_85430098_85430148	0.052735	SOX2.p2	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1
hg19_v1_chr6_-_105850976_105851014	0.0526751	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg19_v1_chr3_-_124842442_124842468	0.0524074	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr5_+_140174443_140174549	0.0523896	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg19_v1_chr6_-_105850958_105850958	0.0520868	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg19_v1_chr15_+_72766665_72766670	0.05208	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr5_+_86563594_86563777	0.0520505	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr15_+_49715374_49715458	0.0519866	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7
hg19_v1_chr22_+_21271619_21271720	0.0519152	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr2_+_68592432_68592483	0.0517839	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg19_v1_chr13_+_100633977_100634063	0.0517801	SOX2.p2	NM_007129|ZIC2|7546|Zic family member 2
hg19_v1_chr16_+_88636818_88636839	0.0516377	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr1_-_178840079_178840214	0.0515554	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg19_v1_chr12_+_7282963_7283286	0.0513401	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr12_-_122018100_122018418	0.0513112	SOX2.p2	AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B	NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B
hg19_v1_chr18_-_53303129_53303187	0.0512859	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr4_+_144434555_144434902	0.0510208	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v1_chr19_+_41256758_41256795	0.0509565	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr11_-_113577023_113577094	0.0508559	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg19_v1_chr6_+_43738394_43738674	0.0508529	SOX2.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr2_+_232573226_232573243	0.0508187	SOX2.p2	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg19_v1_chr1_+_84630374_84630386	0.0507507	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr6_+_71123105_71123122	0.050675	SOX2.p2	NM_001105531|FAM135A|57579|family with sequence similarity 135, member A	NM_020819|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr15_+_48010685_48010685	0.0505911	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v1_chr21_-_27423423_27423464	0.0504747	SOX2.p2	
hg19_v1_chr12_-_18890917_18890990	0.0504693	SOX2.p2	AF532185|PLCZ1|89869|phospholipase C, zeta 1	NM_033123|PLCZ1|89869|phospholipase C, zeta 1	AK314516|PLCZ1|89869|phospholipase C, zeta 1	AY035866|PLCZ1|89869|phospholipase C, zeta 1	AK292279|PLCZ1|89869|phospholipase C, zeta 1
hg19_v1_chr9_+_137004913_137004996	0.0504463	SOX2.p2	AJ011376|WDR5|11091|WD repeat domain 5	NM_052821|WDR5|11091|WD repeat domain 5
hg19_v1_chr1_-_17766241_17766301	0.0504054	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr11_+_128563955_128563968	0.0503149	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr19_+_7660698_7660944	0.0502611	SOX2.p2	BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3
hg19_v1_chr14_-_24777184_24777188	0.0501088	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr20_-_17511973_17512012	0.0500916	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr17_-_39728304_39728309	0.050048	SOX2.p2	BC121170|KRT9|3857|keratin 9	NM_000226|KRT9|3857|keratin 9	S69510|KRT9|3857|keratin 9	Z29074|KRT9|3857|keratin 9
hg19_v1_chr19_+_13250072_13250163	0.0498508	SOX2.p2	AK123056|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg19_v1_chr2_-_31637598_31637624	0.0497752	SOX2.p2	NM_000379|XDH|7498|xanthine dehydrogenase
hg19_v1_chr14_-_23451704_23451847	0.0497673	SOX2.p2	BC034968|AJUBA|84962|ajuba LIM protein	NM_032876|AJUBA|84962|ajuba LIM protein
hg19_v1_chr17_-_39093671_39093835	0.0497358	SOX2.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr12_+_21168629_21168629	0.0494188	SOX2.p2	AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)	NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v1_chr6_-_128222175_128222225	0.0493804	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg19_v1_chr6_+_37137882_37138363	0.0492353	SOX2.p2	NM_001243186|PIM1|5292|pim-1 oncogene	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg19_v1_chr9_-_19786886_19787016	0.0490193	SOX2.p2	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v1_chr18_-_5197240_5197265	0.0490162	SOX2.p2	NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42
hg19_v1_chr15_-_34610928_34611028	0.049016	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg19_v1_chr14_+_70918873_70918873	0.0486748	SOX2.p2	NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21
hg19_v1_chr6_-_105850765_105850927	0.0486242	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg19_v1_chr17_-_27402626_27402626	0.048477	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg19_v1_chr1_+_100316530_100316598	0.0480581	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr1_+_167298382_167298497	0.0480165	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg19_v1_chr17_+_65373362_65373456	0.0479394	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr4_+_175839508_175839558	0.0478694	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg19_v1_chr6_+_84569364_84569393	0.0477965	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr12_+_56324945_56325082	0.0477949	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg19_v1_chr1_-_153283166_153283193	0.0477325	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg19_v1_chr2_+_196521851_196521965	0.0476933	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr3_-_119582422_119582427	0.0476076	SOX2.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr5_+_161494647_161495043	0.0475337	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v1_chr6_+_47666288_47666301	0.047462	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg19_v1_chr10_-_61122219_61122351	0.0474615	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg19_v1_chr1_+_66797775_66797932	0.0474571	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr18_-_78005230_78005488	0.0474255	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg19_v1_chr19_-_1111972_1112003	0.0474158	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg19_v1_chr9_-_36276930_36277052	0.0473648	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg19_v1_chr3_-_160283071_160283118	0.047244	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr1_-_114354864_114354899	0.0472278	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chrX_+_84498993_84499002	0.0471582	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg19_v1_chr5_-_44388666_44388865	0.0470537	SOX2.p2	AF508782|FGF10|2255|fibroblast growth factor 10	AB002097|FGF10|2255|fibroblast growth factor 10	AF411527|FGF10|2255|fibroblast growth factor 10	BC069561|FGF10|2255|fibroblast growth factor 10	CR541665|FGF10|2255|fibroblast growth factor 10	CR541688|FGF10|2255|fibroblast growth factor 10	GQ351295|FGF10|2255|fibroblast growth factor 10	HQ258011|FGF10|2255|fibroblast growth factor 10	NM_004465|FGF10|2255|fibroblast growth factor 10	U67918|FGF10|2255|fibroblast growth factor 10	BC105023|FGF10|2255|fibroblast growth factor 10	BC105021|FGF10|2255|fibroblast growth factor 10
hg19_v1_chr1_+_153940345_153940403	0.0469877	SOX2.p2	AK297703|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AY049977|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AK304665|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	AB052778|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	NM_130898|CREB3L4|148327|cAMP responsive element binding protein 3-like 4	BC038962|CREB3L4|148327|cAMP responsive element binding protein 3-like 4
hg19_v1_chr7_+_116593354_116593417	0.0467867	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr7_-_27213873_27213954	0.0467561	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg19_v1_chrX_+_129139163_129139250	0.0467014	SOX2.p2	NM_021946|BCORL1|63035|BCL6 corepressor-like 1	AK074089|BCORL1|63035|BCL6 corepressor-like 1
hg19_v1_chr5_+_147648374_147648422	0.0466782	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr17_-_76124791_76124886	0.0463663	SOX2.p2	AK096076|TMC6|11322|transmembrane channel-like 6	AY099356|TMC6|11322|transmembrane channel-like 6	AY099357|TMC6|11322|transmembrane channel-like 6	AK303584|TMC6|11322|transmembrane channel-like 6	AK310734|TMC6|11322|transmembrane channel-like 6	NM_001127198|TMC6|11322|transmembrane channel-like 6	AK021738|TMC6|11322|transmembrane channel-like 6
hg19_v1_chr21_-_27512668_27512777	0.046355	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr8_-_70745403_70745403	0.0463188	SOX2.p2	BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg19_v1_chr8_-_110620220_110620232	0.0463077	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr7_+_39017608_39017608	0.0462133	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg19_v1_chr18_-_19997773_19997877	0.0461669	SOX2.p2	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1
hg19_v1_chr14_-_23446431_23446431	0.0461395	SOX2.p2	AK096128|AJUBA|84962|ajuba LIM protein	NM_198086|AJUBA|84962|ajuba LIM protein
hg19_v1_chrX_-_110654373_110654373	0.0459316	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg19_v1_chr20_-_18810838_18810838	0.0458803	SOX2.p2	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496
hg19_v1_chrX_+_30233674_30233692	0.0458693	SOX2.p2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2
hg19_v1_chr1_+_116925991_116925991	0.0458285	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg19_v1_chr15_-_23932410_23932455	0.0458089	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)
hg19_v1_chr6_+_12290528_12290658	0.0457885	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr9_+_125795787_125795948	0.0457577	SOX2.p2	AK294531|RABGAP1|23637|RAB GTPase activating protein 1	AK299686|GPR21|2844|G protein-coupled receptor 21	AK313539|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr12_+_41831484_41831691	0.0457237	SOX2.p2	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4	AK131554|PDZRN4|29951|PDZ domain containing ring finger 4	NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4	AK091096|PDZRN4|29951|PDZ domain containing ring finger 4	BC093744|PDZRN4|29951|PDZ domain containing ring finger 4	BC093746|PDZRN4|29951|PDZ domain containing ring finger 4
hg19_v1_chr11_+_36397534_36397587	0.0457145	SOX2.p2	NM_001160168|PRR5L|79899|proline rich 5 like	NM_024841|PRR5L|79899|proline rich 5 like	BX640959|PRR5L|79899|proline rich 5 like	AK024275|PRR5L|79899|proline rich 5 like
hg19_v1_chr3_-_196911001_196911001	0.0456742	SOX2.p2	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)	NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)
hg19_v1_chr20_-_44144263_44144263	0.0456193	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg19_v1_chr2_+_169312793_169312958	0.0456053	SOX2.p2	NM_203463|CERS6|253782|ceramide synthase 6	BC109284|CERS6|253782|ceramide synthase 6	BC109285|CERS6|253782|ceramide synthase 6
hg19_v1_chr1_+_200708604_200708738	0.0455977	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr17_-_7297826_7297888	0.0455592	SOX2.p2	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr3_-_160283166_160283219	0.0455479	SOX2.p2	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr14_-_23652840_23652905	0.0455366	SOX2.p2	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8
hg19_v1_chrX_-_118726852_118727112	0.045517	SOX2.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr11_-_58343308_58343389	0.0454677	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg19_v1_chr19_-_1567875_1568056	0.0454516	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr8_+_67039130_67039551	0.0453945	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg19_v1_chr4_-_83350548_83350618	0.0453834	SOX2.p2	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr14_-_22005035_22005336	0.0453366	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr11_+_46740736_46740754	0.0453262	SOX2.p2	NM_000506|F2|2147|coagulation factor II (thrombin)	AK303747|F2|2147|coagulation factor II (thrombin)	AK312965|F2|2147|coagulation factor II (thrombin)	AJ972449|F2|2147|coagulation factor II (thrombin)
hg19_v1_chr1_+_151739130_151739191	0.0453104	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg19_v1_chr19_-_33360641_33360682	0.0452893	SOX2.p2	BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9
hg19_v1_chr2_-_27579277_27579386	0.0452757	SOX2.p2	BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v1_chr11_+_129991582_129991674	0.0452046	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chrX_+_91090459_91090503	0.0451979	SOX2.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr20_+_31805118_31805157	0.0451706	SOX2.p2	BC041904|BPIFA3|128861|BPI fold containing family A, member 3	NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3	NM_178466|BPIFA3|128861|BPI fold containing family A, member 3	BC066354|BPIFA3|128861|BPI fold containing family A, member 3
hg19_v1_chr3_+_143692166_143692268	0.0450521	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg19_v1_chr8_+_26435590_26435770	0.0450199	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2	AB370194|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chrX_+_17653412_17653412	0.0448487	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v1_chr1_-_201390845_201390873	0.0448201	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg19_v1_chr22_-_21984274_21984356	0.0447482	SOX2.p2	BC064568|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg19_v1_chr11_+_102188180_102188225	0.0447443	SOX2.p2	NM_001165|BIRC3|330|baculoviral IAP repeat containing 3	NM_182962|BIRC3|330|baculoviral IAP repeat containing 3	AF070674|BIRC3|330|baculoviral IAP repeat containing 3
hg19_v1_chr1_+_197886499_197886516	0.0447199	SOX2.p2	AY273889|LHX9|56956|LIM homeobox 9	NM_020204|LHX9|56956|LIM homeobox 9
hg19_v1_chr1_+_16010838_16011050	0.0446507	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr16_-_3930713_3930721	0.0446488	SOX2.p2	U85962|CREBBP|1387|CREB binding protein
hg19_v1_chr17_-_39538635_39538654	0.0446269	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg19_v1_chr15_+_66694216_66694219	0.0445801	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg19_v1_chr1_-_53793583_53793742	0.0445196	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr6_-_155777036_155777036	0.0445174	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg19_v1_chr1_+_31886659_31886715	0.0445153	SOX2.p2	AK093784|SERINC2|347735|serine incorporator 2	AK316357|SERINC2|347735|serine incorporator 2	NM_001199039|SERINC2|347735|serine incorporator 2	NM_018565|SERINC2|347735|serine incorporator 2	AK296118|SERINC2|347735|serine incorporator 2
hg19_v1_chr2_+_196521470_196521681	0.0443707	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr4_+_106629905_106630041	0.0442113	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr3_+_136537860_136537979	0.0440441	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr1_-_17766142_17766208	0.0439966	SOX2.p2	AB040903|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr11_+_46740769_46740804	0.0439669	SOX2.p2	BC051332|F2|2147|coagulation factor II (thrombin)	AK222775|F2|2147|coagulation factor II (thrombin)	AK222777|F2|2147|coagulation factor II (thrombin)	AK293326|F2|2147|coagulation factor II (thrombin)	EU832664|F2|2147|coagulation factor II (thrombin)	EU832742|F2|2147|coagulation factor II (thrombin)	V00595|F2|2147|coagulation factor II (thrombin)
hg19_v1_chr4_+_146031528_146031573	0.0439328	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg19_v1_chr6_-_138893666_138893750	0.0438362	SOX2.p2	NM_020464|NHSL1|57224|NHS-like 1
hg19_v1_chr17_+_11924116_11924247	0.0437017	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg19_v1_chr6_+_50786438_50786632	0.043686	SOX2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg19_v1_chr6_+_90604185_90604187	0.0436686	SOX2.p2	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa	NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa
hg19_v1_chr4_-_153303663_153303666	0.0436547	SOX2.p2	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7	AY008274|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr11_+_13690230_13690244	0.0436194	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr9_+_113431050_113431183	0.0434958	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg19_v1_chr6_+_84569394_84569410	0.0434277	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr1_-_216978708_216978708	0.0434086	SOX2.p2	AY388461|ESRRG|2104|estrogen-related receptor gamma	NM_001243514|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr4_-_40517913_40518003	0.04338	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr11_-_85437457_85437510	0.0433341	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr7_+_77167351_77167385	0.0430152	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr1_-_93399531_93399654	0.0429935	SOX2.p2	
hg19_v1_chr1_-_36097137_36097137	0.0429608	SOX2.p2	AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2
hg19_v1_chr11_-_83984230_83984322	0.0429171	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr12_-_57472547_57472551	0.0427483	SOX2.p2	AL833310|TMEM194A|23306|transmembrane protein 194A	AL833311|TMEM194A|23306|transmembrane protein 194A
hg19_v1_chr17_-_56160564_56160670	0.0427275	SOX2.p2	
hg19_v1_chr9_+_103204187_103204220	0.0426898	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr12_-_102872329_102872428	0.0426813	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr14_+_39703119_39703318	0.0426712	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	HQ258350|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg19_v1_chr1_-_150738232_150738233	0.0425441	SOX2.p2	BC002642|CTSS|1520|cathepsin S
hg19_v1_chr21_-_19191643_19191718	0.0424097	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg19_v1_chr14_+_91580356_91580455	0.0423058	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr7_-_92855780_92855786	0.042284	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr2_+_166326156_166326212	0.0421762	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr2_-_164592512_164592522	0.0421393	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg19_v1_chr6_+_134758840_134758857	0.0420716	SOX2.p2	AK055166|LOC154092|154092|uncharacterized LOC154092
hg19_v1_chr17_-_41910439_41910814	0.0420677	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg19_v1_chr16_+_57769667_57769781	0.0420629	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr4_+_128554079_128554200	0.0418551	SOX2.p2	NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)
hg19_v1_chr1_+_110881944_110882045	0.0418005	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_001201545|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr6_+_139456240_139456272	0.0417162	SOX2.p2	BC070068|HECA|51696|headcase homolog (Drosophila)	AB033492|HECA|51696|headcase homolog (Drosophila)	NM_016217|HECA|51696|headcase homolog (Drosophila)
hg19_v1_chr1_+_43766565_43766742	0.0417117	SOX2.p2	NM_001253357|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg19_v1_chr12_+_110152186_110152189	0.0416782	SOX2.p2	NM_032829|C12orf34|84915|chromosome 12 open reading frame 34	BC020193|C12orf34|84915|chromosome 12 open reading frame 34
hg19_v1_chr6_+_123317579_123317581	0.0415285	SOX2.p2	BC101377|CLVS2|134829|clavesin 2	BC101376|CLVS2|134829|clavesin 2	NM_001010852|CLVS2|134829|clavesin 2
hg19_v1_chr6_+_100054649_100054649	0.0414592	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg19_v1_chr1_+_110882063_110882099	0.041273	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr2_+_101869327_101869347	0.0411598	SOX2.p2	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr1_+_16010816_16010831	0.0411488	SOX2.p2	BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2	NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr5_-_142077508_142077634	0.0411394	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr17_-_17485744_17485751	0.0411107	SOX2.p2	AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr19_-_51531283_51531289	0.041077	SOX2.p2	AB013730|KLK11|11012|kallikrein-related peptidase 11	BC022068|KLK11|11012|kallikrein-related peptidase 11	NM_001167605|KLK11|11012|kallikrein-related peptidase 11	NM_006853|KLK11|11012|kallikrein-related peptidase 11
hg19_v1_chr13_-_31040035_31040081	0.0407987	SOX2.p2	AK057120|HMGB1|3146|high mobility group box 1	AK310975|HMGB1|3146|high mobility group box 1	AK291494|HMGB1|3146|high mobility group box 1	AK304506|HMGB1|3146|high mobility group box 1	NM_002128|HMGB1|3146|high mobility group box 1
hg19_v1_chr17_-_17485691_17485724	0.040783	SOX2.p2	AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr15_+_64791618_64791618	0.0407658	SOX2.p2	NM_015042|ZNF609|23060|zinc finger protein 609
hg19_v1_chr4_-_83350829_83351248	0.0406832	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr7_-_50628744_50628774	0.0404439	SOX2.p2	AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v1_chr2_+_11674241_11674241	0.0403861	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chrY_-_15591799_15591868	0.0403065	SOX2.p2	AK292858|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC071744|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC029389|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	BC012581|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked
hg19_v1_chr21_+_27107671_27107726	0.0402824	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr4_+_57774365_57774509	0.0402635	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg19_v1_chr6_+_123100860_123100939	0.0401647	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr2_+_182850550_182850748	0.0400071	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v1_chr15_+_90544608_90544770	0.0398452	SOX2.p2	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg19_v1_chr16_-_10788729_10788801	0.0397037	SOX2.p2	HQ258441|TEKT5|146279|tektin 5	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg19_v1_chr20_+_55099784_55099823	0.0396167	SOX2.p2	NM_001012971|FAM209A|200232|family with sequence similarity 209, member A	BC029411|FAM209A|200232|family with sequence similarity 209, member A	BC105792|FAM209B|388799|family with sequence similarity 209, member B	BC107704|FAM209A|200232|family with sequence similarity 209, member A	BC070179|FAM209A|200232|family with sequence similarity 209, member A
hg19_v1_chr10_-_735522_735861	0.0396045	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v1_chr2_-_170218972_170218991	0.0395886	SOX2.p2	AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2	AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2
hg19_v1_chr22_-_21984366_21984434	0.0395068	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg19_v1_chr8_+_21777165_21777214	0.0394475	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr15_-_88799961_88799971	0.0394403	SOX2.p2	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3
hg19_v1_chr17_+_27573874_27573881	0.039439	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1	HQ258110|CRYBA1|1411|crystallin, beta A1
hg19_v1_chr15_+_94899163_94899455	0.0394356	SOX2.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg19_v1_chr19_-_42947050_42947199	0.0393576	SOX2.p2	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17	BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17	NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17
hg19_v1_chr7_+_5632435_5632441	0.0393514	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr18_+_21594751_21594762	0.0392808	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg19_v1_chr10_+_18948276_18948566	0.0392616	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg19_v1_chr12_+_7055736_7055739	0.0392434	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr19_+_49838734_49838797	0.039207	SOX2.p2	X14046|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg19_v1_chr3_-_101039403_101039441	0.0391337	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg19_v1_chr5_-_75008245_75008279	0.0390747	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg19_v1_chr21_+_41239346_41239408	0.0390704	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg19_v1_chr4_-_100484824_100484824	0.0390627	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg19_v1_chr1_+_212475147_212475147	0.0390603	SOX2.p2	AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha
hg19_v1_chr8_+_98656494_98656732	0.0389829	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg19_v1_chr16_-_71318761_71318859	0.0388548	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg19_v1_chr20_-_50384899_50384957	0.0388359	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr17_-_42441123_42441321	0.0387757	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg19_v1_chr8_+_98656428_98656491	0.0386565	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg19_v1_chr3_-_111851967_111852151	0.0386165	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg19_v1_chr13_-_33002218_33002499	0.0385363	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg19_v1_chr12_-_16759733_16759733	0.0384936	SOX2.p2	BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr17_-_17480778_17480778	0.0384684	SOX2.p2	AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr19_-_11564568_11564577	0.0383966	SOX2.p2	BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
hg19_v1_chr12_+_101988746_101988846	0.0383806	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr15_+_59908908_59909017	0.0383347	SOX2.p2	AK312852|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr4_-_100273831_100273916	0.0382983	SOX2.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg19_v1_chr6_+_80714389_80714409	0.0382605	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg19_v1_chr20_-_50384861_50384895	0.0382427	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr9_-_74979829_74980371	0.0382284	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr10_+_123754141_123754147	0.0381677	SOX2.p2	AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr2_-_100721792_100722044	0.0380903	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr1_-_151118932_151119163	0.038067	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v1_chr12_+_112204690_112204694	0.0379788	SOX2.p2	NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr16_+_4845265_4845378	0.0379277	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chr17_-_48271968_48272123	0.0379105	SOX2.p2	
hg19_v1_chr1_+_16090993_16091029	0.0379066	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr11_+_129979330_129979349	0.0378813	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr3_-_11685395_11685398	0.0378803	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr17_-_38821286_38821415	0.0378709	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr16_-_20416032_20416058	0.0378585	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg19_v1_chr10_-_126138549_126138606	0.0378424	SOX2.p2	NM_001146340|NKX1-2|390010|NK1 homeobox 2
hg19_v1_chr20_-_44175995_44176064	0.0378229	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg19_v1_chr6_+_17282931_17283077	0.0378225	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr6_-_107435635_107435635	0.0376095	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg19_v1_chr21_+_27107522_27107531	0.0376067	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr9_+_27109138_27109146	0.0373922	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg19_v1_chr1_+_198608136_198608210	0.0373617	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr7_-_36764000_36764153	0.0373348	SOX2.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg19_v1_chr8_+_42195972_42196142	0.0371406	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr14_-_21493122_21493271	0.037132	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg19_v1_chr19_+_7702020_7702035	0.0371268	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr10_+_29577989_29578044	0.0371175	SOX2.p2	NM_032517|LYZL1|84569|lysozyme-like 1	BC021730|LYZL1|84569|lysozyme-like 1	AY358694|LYZL1|84569|lysozyme-like 1
hg19_v1_chr14_+_103592663_103592873	0.0370669	SOX2.p2	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2
hg19_v1_chr22_+_21986968_21987085	0.0370192	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg19_v1_chr12_-_24103953_24103970	0.0369657	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr9_+_133971862_133971894	0.0368181	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg19_v1_chrX_+_15525430_15525430	0.0367502	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr4_-_151770611_151770688	0.0367452	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr6_-_32163890_32163924	0.0367387	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg19_v1_chr7_+_96745904_96745904	0.0367333	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg19_v1_chr7_+_89843133_89843133	0.0367166	SOX2.p2	AF526382|STEAP2|261729|STEAP family member 2, metalloreductase	AY358267|STEAP2|261729|STEAP family member 2, metalloreductase	NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase
hg19_v1_chr12_-_102874299_102874306	0.036629	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr6_+_149068148_149068270	0.0365992	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg19_v1_chr19_-_4342718_4342782	0.0365556	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg19_v1_chr17_+_72427535_72427674	0.0365449	SOX2.p2	BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg19_v1_chrX_-_100914816_100914862	0.0364532	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr9_-_117160748_117160755	0.0364439	SOX2.p2	AY703039|AKNA|80709|AT-hook transcription factor	AK126136|AKNA|80709|AT-hook transcription factor
hg19_v1_chr17_-_2996289_2996289	0.0364405	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg19_v1_chrX_-_13338517_13338517	0.0363459	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg19_v1_chr7_+_103969103_103969334	0.0362914	SOX2.p2	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3
hg19_v1_chr1_+_165797060_165797112	0.0362579	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg19_v1_chrX_+_115301957_115302033	0.0361929	SOX2.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg19_v1_chr4_-_20985547_20985711	0.0361857	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr6_+_41040713_41040732	0.036152	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr11_-_124310980_124311053	0.0361405	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg19_v1_chr1_+_16085245_16085309	0.0360115	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr5_+_180467224_180467250	0.035997	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg19_v1_chr7_-_16505292_16505473	0.0359706	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg19_v1_chr17_+_65373574_65373603	0.0359348	SOX2.p2	AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr17_-_34266359_34266559	0.0358703	SOX2.p2	AY742214|LYZL6|57151|lysozyme-like 6	AY359018|LYZL6|57151|lysozyme-like 6	NM_020426|LYZL6|57151|lysozyme-like 6
hg19_v1_chr18_+_32556891_32557027	0.0358596	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chr11_+_63753827_63753896	0.0358567	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr2_-_136873740_136873857	0.0358314	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg19_v1_chr6_+_56954978_56954984	0.0358312	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg19_v1_chr10_-_99393175_99393343	0.0357677	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg19_v1_chr5_+_10353980_10354037	0.0357373	SOX2.p2	
hg19_v1_chr15_+_72766689_72766744	0.0357145	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr11_-_84634437_84634464	0.0356337	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chrY_+_3447081_3447285	0.0355643	SOX2.p2	AK292609|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	AF332223|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	NM_139214|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101143|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC101146|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked	BC128604|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked
hg19_v1_chr8_+_63161499_63161630	0.035538	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg19_v1_chr16_-_58663727_58663731	0.0354979	SOX2.p2	BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr14_-_95608054_95608054	0.0354876	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr13_+_97794050_97794115	0.0354694	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr4_+_39699663_39699946	0.0354229	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K
hg19_v1_chr17_-_34270670_34270702	0.0353612	SOX2.p2	BC054481|LYZL6|57151|lysozyme-like 6	NM_001199951|LYZL6|57151|lysozyme-like 6
hg19_v1_chr2_+_159651828_159651843	0.0353575	SOX2.p2	AY324399|DAPL1|92196|death associated protein-like 1	NM_001017920|DAPL1|92196|death associated protein-like 1	AF086541|DAPL1|92196|death associated protein-like 1	BC140719|DAPL1|92196|death associated protein-like 1	BC127682|DAPL1|92196|death associated protein-like 1	BC127683|DAPL1|92196|death associated protein-like 1
hg19_v1_chr1_-_108231122_108231127	0.035276	SOX2.p2	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor	NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor
hg19_v1_chr2_+_73114501_73114560	0.0352165	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg19_v1_chr3_-_66024508_66024518	0.0352064	SOX2.p2	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v1_chr10_-_127569851_127569883	0.0351918	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg19_v1_chr19_+_40093163_40093207	0.0351675	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg19_v1_chr6_+_129204285_129204341	0.0351299	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg19_v1_chr1_-_177133950_177134023	0.0351227	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg19_v1_chr17_+_73720775_73720783	0.0351016	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr2_-_142889269_142889269	0.0350912	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr2_-_198540583_198540767	0.0350839	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg19_v1_chr2_+_16080559_16080569	0.0347992	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr6_-_52710892_52710892	0.0346955	SOX2.p2	NM_153699|GSTA5|221357|glutathione S-transferase alpha 5
hg19_v1_chr21_+_34398210_34398292	0.0346906	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg19_v1_chr2_+_14772809_14772834	0.0346512	SOX2.p2	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr12_-_102874373_102874391	0.0346233	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr9_+_132934685_132934942	0.0346069	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg19_v1_chr15_-_42186274_42186274	0.0345527	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg19_v1_chr16_+_88636841_88636897	0.0345407	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr11_-_117695408_117695460	0.0345338	SOX2.p2	DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2	U50743|FXYD2|486|FXYD domain containing ion transport regulator 2	AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2	AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2	BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2	NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2
hg19_v1_chr14_-_105531764_105531783	0.0343126	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132	AX775935|GPR132|29933|G protein-coupled receptor 132	AX775841|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr4_+_140587086_140587182	0.0343091	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg19_v1_chr1_+_150898814_150898924	0.0342529	SOX2.p2	NM_001145415|SETDB1|9869|SET domain, bifurcated 1	NM_001243491|SETDB1|9869|SET domain, bifurcated 1	NM_012432|SETDB1|9869|SET domain, bifurcated 1	AK302461|SETDB1|9869|SET domain, bifurcated 1	AK308335|SETDB1|9869|SET domain, bifurcated 1	BC028671|SETDB1|9869|SET domain, bifurcated 1	D31891|SETDB1|9869|SET domain, bifurcated 1	BC009362|SETDB1|9869|SET domain, bifurcated 1
hg19_v1_chr4_+_113218498_113218557	0.0341072	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg19_v1_chr6_+_34857021_34857179	0.0340998	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr2_-_134326030_134326047	0.0340928	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr6_-_139094788_139094815	0.0340412	SOX2.p2	AK092592|LOC100507462|100507462|uncharacterized LOC100507462	NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462
hg19_v1_chr4_+_95128750_95128872	0.0339569	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr11_+_5009420_5009439	0.0339285	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg19_v1_chr19_+_38397880_38397945	0.0338805	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr2_+_10091791_10091910	0.0337867	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg19_v1_chr1_+_155036201_155036299	0.0337727	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr16_-_30103204_30103290	0.0337271	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr12_-_56360457_56360495	0.0337192	SOX2.p2	AK092881|PMEL|6490|premelanosome protein	AK130180|PMEL|6490|premelanosome protein	NM_006928|PMEL|6490|premelanosome protein
hg19_v1_chr11_+_13690151_13690229	0.0337167	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr9_-_35650852_35650946	0.0336917	SOX2.p2	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg19_v1_chr9_+_125281418_125281420	0.033689	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg19_v1_chr17_-_7298160_7298161	0.033667	SOX2.p2	NM_001201576|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chrX_-_73834460_73834469	0.0335929	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr1_-_43637969_43638240	0.0335185	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg19_v1_chr16_-_71610948_71610997	0.0335064	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg19_v1_chr16_-_58663739_58663751	0.0334383	SOX2.p2	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr3_-_112564789_112564796	0.0334377	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like	NM_001199215|CD200R1L|344807|CD200 receptor 1-like
hg19_v1_chr3_-_10547221_10547245	0.0333988	SOX2.p2	M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr15_+_80987953_80988065	0.0333287	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg19_v1_chr1_-_17765052_17765071	0.0333192	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr20_-_35492069_35492200	0.0332746	SOX2.p2	NM_080627|KIAA0889|140710|KIAA0889
hg19_v1_chr4_+_83351765_83351814	0.0332603	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr11_-_77184549_77185116	0.0332195	SOX2.p2	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v1_chr19_+_41257086_41257312	0.0331814	SOX2.p2	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr19_+_36208917_36208944	0.0331108	SOX2.p2	AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4
hg19_v1_chr4_+_88896838_88896866	0.0330853	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr3_+_57994087_57994207	0.0330422	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg19_v1_chr12_-_121248679_121248688	0.0330114	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase-like 3
hg19_v1_chr19_+_55888203_55888203	0.0329442	SOX2.p2	AF442729|TMEM190|147744|transmembrane protein 190	BC128189|TMEM190|147744|transmembrane protein 190	BC128190|TMEM190|147744|transmembrane protein 190	NM_139172|TMEM190|147744|transmembrane protein 190
hg19_v1_chr4_+_17616246_17616286	0.0329291	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg19_v1_chr17_-_39661803_39661865	0.0328679	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	HQ258420|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg19_v1_chr5_+_57878901_57878938	0.0327373	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr6_+_29794743_29794763	0.032686	SOX2.p2	BC021708|HLA-G|3135|major histocompatibility complex, class I, G	AK302054|HLA-G|3135|major histocompatibility complex, class I, G	NM_002127|HLA-G|3135|major histocompatibility complex, class I, G	AK093478|HLA-G|3135|major histocompatibility complex, class I, G
hg19_v1_chr7_-_148725764_148725781	0.0326574	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chrX_+_134124967_134124967	0.0325467	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chr3_+_193310997_193311138	0.0325369	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr2_-_100722259_100722277	0.0325197	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr12_-_57472573_57472581	0.0325181	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg19_v1_chr22_-_50523853_50524033	0.032449	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr6_-_79787939_79788175	0.0323842	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr16_+_57769626_57769665	0.0323728	SOX2.p2	NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr12_-_122296619_122296768	0.0323094	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg19_v1_chrX_+_11777734_11777760	0.0322824	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg19_v1_chr4_+_100432160_100432199	0.0322476	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg19_v1_chr4_+_114214102_114214137	0.0321569	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr1_-_161168816_161168846	0.0321448	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg19_v1_chr5_+_140566655_140566893	0.0321182	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg19_v1_chr12_-_102874321_102874323	0.0321119	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr4_+_81256873_81256922	0.0321041	SOX2.p2	BC034296|C4orf22|255119|chromosome 4 open reading frame 22	NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22	NM_152770|C4orf22|255119|chromosome 4 open reading frame 22	AK128642|C4orf22|255119|chromosome 4 open reading frame 22	AY349359|C4orf22|255119|chromosome 4 open reading frame 22	DQ893197|C4orf22|255119|chromosome 4 open reading frame 22	DQ893198|C4orf22|255119|chromosome 4 open reading frame 22	DQ896152|C4orf22|255119|chromosome 4 open reading frame 22	DQ896153|C4orf22|255119|chromosome 4 open reading frame 22	DQ896154|C4orf22|255119|chromosome 4 open reading frame 22	DQ896534|C4orf22|255119|chromosome 4 open reading frame 22	DQ896535|C4orf22|255119|chromosome 4 open reading frame 22
hg19_v1_chr21_-_33104405_33104467	0.0320489	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr8_+_82192717_82192830	0.0320451	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chrX_-_15288588_15288588	0.0320305	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg19_v1_chr4_+_83351725_83351764	0.0319764	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr4_+_72102249_72102324	0.0319679	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr1_-_46152183_46152301	0.0319569	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg19_v1_chr12_-_50595303_50595315	0.0319418	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr1_-_114354906_114355097	0.0319283	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chr12_+_7055753_7055888	0.0318779	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr2_-_152955502_152955592	0.0318283	SOX2.p2	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr11_-_102323353_102323874	0.0317672	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg19_v1_chr12_+_101188373_101188735	0.0317302	SOX2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg19_v1_chr3_+_134514044_134514259	0.03172	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg19_v1_chr8_-_119123804_119124118	0.0316123	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg19_v1_chr9_+_116343169_116343207	0.0316059	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr4_-_141075232_141075433	0.0315404	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg19_v1_chr8_-_124749573_124749665	0.0315198	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr3_+_136649316_136649358	0.0314929	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr17_+_72428228_72428282	0.0314805	SOX2.p2	AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg19_v1_chr2_+_86947570_86947789	0.0314249	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr9_+_125376947_125377016	0.0313542	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg19_v1_chr17_+_3572089_3572115	0.0313464	SOX2.p2	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg19_v1_chr4_-_65275000_65275193	0.031314	SOX2.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg19_v1_chr4_+_113152838_113153331	0.0312955	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg19_v1_chr11_-_71781091_71781137	0.0312755	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr5_+_56509900_56509957	0.0312686	SOX2.p2	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1	AL136844|GPBP1|65056|GC-rich promoter binding protein 1	AM392551|GPBP1|65056|GC-rich promoter binding protein 1	AM393442|GPBP1|65056|GC-rich promoter binding protein 1
hg19_v1_chr12_-_111358353_111358403	0.0311198	SOX2.p2	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow
hg19_v1_chr14_+_70078313_70078469	0.0310734	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg19_v1_chr10_+_70980058_70980104	0.0309946	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg19_v1_chr3_-_120400957_120401129	0.0309281	SOX2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg19_v1_chr19_+_56186426_56186568	0.0308779	SOX2.p2	NM_001130072|EPN1|29924|epsin 1	NM_013333|EPN1|29924|epsin 1
hg19_v1_chr3_+_238274_238289	0.0308668	SOX2.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr3_-_50329702_50330025	0.0308024	SOX2.p2	U09585|IFRD2|7866|interferon-related developmental regulator 2	BT019999|IFRD2|7866|interferon-related developmental regulator 2	EU832626|IFRD2|7866|interferon-related developmental regulator 2	EU832699|IFRD2|7866|interferon-related developmental regulator 2	AK309114|IFRD2|7866|interferon-related developmental regulator 2	BC001676|IFRD2|7866|interferon-related developmental regulator 2	AK074763|IFRD2|7866|interferon-related developmental regulator 2	BC001327|IFRD2|7866|interferon-related developmental regulator 2	BC007265|IFRD2|7866|interferon-related developmental regulator 2	BC007437|IFRD2|7866|interferon-related developmental regulator 2	NM_006764|IFRD2|7866|interferon-related developmental regulator 2
hg19_v1_chr16_-_15188089_15188167	0.0307257	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg19_v1_chr13_+_34392254_34392315	0.0307251	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr10_+_24755440_24755448	0.0307172	SOX2.p2	AK300422|KIAA1217|56243|KIAA1217
hg19_v1_chrX_+_41306686_41306712	0.0306939	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg19_v1_chr1_-_153067000_153067000	0.0306277	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg19_v1_chr3_-_47823386_47823408	0.0305834	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr1_-_94586678_94586704	0.0305584	SOX2.p2	AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v1_chr8_+_145064167_145064229	0.0304885	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr1_-_230991781_230991781	0.0304401	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg19_v1_chr9_-_140142165_140142221	0.0304216	SOX2.p2	HQ258370|FAM166A|401565|family with sequence similarity 166, member A	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg19_v1_chr6_+_44187241_44187471	0.0304133	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr8_-_6420454_6420929	0.0302468	SOX2.p2	HQ258258|ANGPT2|285|angiopoietin 2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg19_v1_chr1_+_10509775_10509775	0.030242	SOX2.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chr1_+_13742801_13742801	0.0301403	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg19_v1_chr16_+_10479911_10479924	0.0301128	SOX2.p2	AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg19_v1_chr5_+_40909617_40909673	0.0300553	SOX2.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr3_+_174577069_174577111	0.0300038	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v1_chr2_+_153191591_153191750	0.0298947	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg19_v1_chr11_-_35441501_35441609	0.0298803	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr14_-_105531739_105531758	0.0297496	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr20_-_25013307_25013341	0.0297387	SOX2.p2	AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1	AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1	NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1
hg19_v1_chr9_+_103235634_103235825	0.0297253	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr5_-_78281688_78281765	0.0297206	SOX2.p2	BC029051|ARSB|411|arylsulfatase B	NM_198709|ARSB|411|arylsulfatase B
hg19_v1_chr1_-_167522979_167523003	0.0297088	SOX2.p2	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr1_+_27023932_27024006	0.0296481	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr5_-_176037091_176037183	0.02961	SOX2.p2	BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1
hg19_v1_chr8_+_145064238_145064316	0.0296032	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr6_-_138189313_138189388	0.0295742	SOX2.p2	
hg19_v1_chr9_-_107690435_107690525	0.0295649	SOX2.p2	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr12_-_11548485_11548497	0.029551	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg19_v1_chr4_-_89744154_89744408	0.0295465	SOX2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg19_v1_chr11_-_5323174_5323175	0.0295316	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg19_v1_chr12_+_93963597_93963597	0.0294956	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg19_v1_chr5_-_77805930_77806179	0.0294723	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr20_-_30795346_30795605	0.0294348	SOX2.p2	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg19_v1_chr18_-_32924417_32924425	0.0294244	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg19_v1_chr2_+_1417232_1417278	0.0294218	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_001206744|TPO|7173|thyroid peroxidase	NM_001206745|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg19_v1_chr1_-_156399183_156399370	0.0293555	SOX2.p2	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61	U49857|C1orf61|10485|chromosome 1 open reading frame 61	BC059943|C1orf61|10485|chromosome 1 open reading frame 61	BC107686|C1orf61|10485|chromosome 1 open reading frame 61	BC050448|C1orf61|10485|chromosome 1 open reading frame 61	AK095626|C1orf61|10485|chromosome 1 open reading frame 61	BC054045|C1orf61|10485|chromosome 1 open reading frame 61
hg19_v1_chr19_-_17137449_17137632	0.0293275	SOX2.p2	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg19_v1_chr6_-_132967141_132967165	0.0293058	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg19_v1_chr19_+_32836500_32836624	0.0292239	SOX2.p2	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg19_v1_chr12_+_20724797_20724797	0.0292114	SOX2.p2	AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited
hg19_v1_chr2_-_39664129_39664290	0.0291952	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr1_-_202113855_202113866	0.0291506	SOX2.p2	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr18_+_56530060_56530179	0.0291121	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chr6_-_127840499_127840499	0.0291119	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg19_v1_chr5_-_98262217_98262239	0.0291116	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg19_v1_chrX_+_65235279_65235304	0.0291055	SOX2.p2	
hg19_v1_chr3_-_3152057_3152057	0.0290955	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg19_v1_chr1_-_202113698_202113850	0.0290113	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr13_-_25745778_25745856	0.0289656	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg19_v1_chr1_+_150255228_150255258	0.0289535	SOX2.p2	BC047238|C1orf51|148523|chromosome 1 open reading frame 51	NM_144697|C1orf51|148523|chromosome 1 open reading frame 51	AK098755|C1orf51|148523|chromosome 1 open reading frame 51	AK315397|C1orf51|148523|chromosome 1 open reading frame 51
hg19_v1_chr1_-_226496838_226496954	0.0289502	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr5_-_150326105_150326142	0.0289262	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg19_v1_chr2_+_86947429_86947542	0.0289044	SOX2.p2	AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr22_+_29999649_30000080	0.0288884	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg19_v1_chr1_+_178482211_178482322	0.028818	SOX2.p2	AL136694|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49	NM_032126|C1orf49|84066|chromosome 1 open reading frame 49	AK093269|C1orf49|84066|chromosome 1 open reading frame 49	BC034972|C1orf49|84066|chromosome 1 open reading frame 49	AM392874|C1orf49|84066|chromosome 1 open reading frame 49	AM393664|C1orf49|84066|chromosome 1 open reading frame 49
hg19_v1_chr4_-_105416050_105416057	0.0288074	SOX2.p2	AK127778|CXXC4|80319|CXXC finger protein 4
hg19_v1_chr3_+_130569368_130569444	0.0288026	SOX2.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chr2_+_191301020_191301120	0.0287805	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr21_+_27107731_27107801	0.0287327	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr6_+_56954985_56955008	0.0287113	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg19_v1_chr20_+_42543417_42543557	0.0287097	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg19_v1_chr19_+_10765106_10765230	0.0286426	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr2_+_155555092_155555287	0.0286241	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v1_chr11_-_64647136_64647186	0.0286149	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg19_v1_chr3_-_169530451_169530693	0.028609	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34
hg19_v1_chr12_+_65563339_65563370	0.0285972	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg19_v1_chr1_+_110882057_110882057	0.0285892	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg19_v1_chr4_-_24586145_24586175	0.0285865	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr2_+_115219153_115219179	0.0284943	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg19_v1_chr5_+_40909558_40909606	0.0284526	SOX2.p2	AK290349|C7|730|complement component 7	Y11720|C7|730|complement component 7	NM_000587|C7|730|complement component 7	BC065305|C7|730|complement component 7	BC041807|C7|730|complement component 7
hg19_v1_chr8_-_110342107_110342162	0.0284388	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg19_v1_chr5_-_96478502_96478575	0.0284191	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr12_-_25055228_25055321	0.0283677	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr4_+_144435076_144435153	0.028287	SOX2.p2	
hg19_v1_chr3_-_168864325_168864399	0.0282478	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr9_+_131644368_131644398	0.028142	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr4_+_41540187_41540224	0.0280612	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr8_-_101315457_101315486	0.02804	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr7_-_37393271_37393271	0.0279799	SOX2.p2	AK291784|ELMO1|9844|engulfment and cell motility 1	NM_001206482|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr7_-_27205123_27205130	0.0279741	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg19_v1_chr19_-_6502224_6502411	0.027971	SOX2.p2	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa	EU831895|TUBB4A|10382|tubulin, beta 4A class IVa	BC006570|TUBB4A|10382|tubulin, beta 4A class IVa	AK095202|TUBB4A|10382|tubulin, beta 4A class IVa	AK295917|TUBB4A|10382|tubulin, beta 4A class IVa	AK075307|TUBB4A|10382|tubulin, beta 4A class IVa	BC013683|TUBB4A|10382|tubulin, beta 4A class IVa	NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa	AK293503|TUBB4A|10382|tubulin, beta 4A class IVa
hg19_v1_chr5_-_33892292_33892298	0.0279255	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr4_-_48014960_48014960	0.0278927	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr4_+_158141735_158142034	0.0278555	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr6_-_33754712_33754718	0.0278529	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg19_v1_chr12_+_54378929_54379043	0.0278483	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg19_v1_chr8_-_24814028_24814132	0.0278408	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg19_v1_chr4_+_41983712_41983839	0.0278026	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg19_v1_chr4_+_54243829_54243899	0.0277959	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr7_+_143412938_143412962	0.0277008	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg19_v1_chr9_+_103235489_103235519	0.0276965	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr7_-_121944485_121944693	0.0276928	SOX2.p2	AY726588|FEZF1|389549|FEZ family zinc finger 1	BC127714|FEZF1|389549|FEZ family zinc finger 1	BC127715|FEZF1|389549|FEZ family zinc finger 1	NM_001024613|FEZF1|389549|FEZ family zinc finger 1	NM_001160264|FEZF1|389549|FEZ family zinc finger 1	BC136684|FEZF1|389549|FEZ family zinc finger 1	BC144367|FEZF1|389549|FEZ family zinc finger 1	AK300742|FEZF1|389549|FEZ family zinc finger 1
hg19_v1_chr21_-_32931289_32931427	0.0276793	SOX2.p2	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg19_v1_chr7_+_150076405_150076449	0.027672	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg19_v1_chr10_-_30918625_30918646	0.0276006	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg19_v1_chr7_-_148725731_148725755	0.0275563	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr12_-_16759939_16760083	0.027545	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr16_-_47005339_47005358	0.0275024	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v1_chr6_-_55740387_55740392	0.0274975	SOX2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg19_v1_chr6_-_15248886_15248916	0.0274191	SOX2.p2	
hg19_v1_chr12_+_112204711_112204786	0.027412	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr4_+_54292035_54292107	0.0274115	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr4_+_88896899_88896928	0.0273929	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr7_-_150924220_150924330	0.0273313	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr3_-_126327397_126327397	0.0272617	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr11_-_84634219_84634246	0.0272452	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr15_-_31947541_31947541	0.0272053	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr1_+_244216506_244216581	0.0271953	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg19_v1_chr1_+_84768333_84768333	0.0271758	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg19_v1_chr2_+_191014971_191014971	0.0271441	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg19_v1_chr3_+_39371196_39371294	0.0271441	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg19_v1_chr10_+_111967302_111967416	0.0270222	SOX2.p2	BC035128|MXI1|4601|MAX interactor 1	NM_130439|MXI1|4601|MAX interactor 1
hg19_v1_chr7_-_45151272_45151295	0.0269624	SOX2.p2	BC017235|TBRG4|9238|transforming growth factor beta regulator 4	BC014918|TBRG4|9238|transforming growth factor beta regulator 4	AK022575|TBRG4|9238|transforming growth factor beta regulator 4	AK222943|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr4_+_88896801_88896819	0.0268466	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr16_+_88636657_88636808	0.0268376	SOX2.p2	NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr6_+_167525294_167525294	0.0268111	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chr3_-_150996153_150996229	0.0267404	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg19_v1_chr1_-_114414245_114414374	0.0264764	SOX2.p2	JN084012|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg19_v1_chr19_-_2717272_2717427	0.026465	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg19_v1_chr14_+_70078309_70078312	0.0264495	SOX2.p2	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg19_v1_chr17_+_67498391_67498569	0.0264304	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr4_+_78079302_78079685	0.0263744	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg19_v1_chrX_+_99899388_99899402	0.0263719	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr6_+_64356430_64356455	0.0263628	SOX2.p2	AF091622|PHF3|23469|PHD finger protein 3	BC113650|PHF3|23469|PHD finger protein 3	BC113652|PHF3|23469|PHD finger protein 3	NM_015153|PHF3|23469|PHD finger protein 3	D87685|PHF3|23469|PHD finger protein 3
hg19_v1_chr4_-_24586176_24586177	0.026287	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr6_+_134274247_134274443	0.0262805	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr9_+_131644427_131644478	0.0262679	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr5_+_65017993_65018200	0.0262487	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg19_v1_chr13_-_84456473_84456527	0.0262451	SOX2.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr9_-_74979625_74979825	0.0262153	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr16_-_20702577_20702577	0.0261822	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg19_v1_chr7_+_22767101_22767136	0.0261727	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr12_+_69633316_69633351	0.0261702	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr4_+_15341559_15341611	0.0261503	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr19_+_7702010_7702014	0.0261346	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr14_-_21979364_21979506	0.0261114	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg19_v1_chr19_+_1026271_1026327	0.0260824	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg19_v1_chr2_+_202047620_202047620	0.02601	SOX2.p2	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr17_+_18768781_18768861	0.0259964	SOX2.p2	NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v1_chr8_+_73449625_73449662	0.0259882	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg19_v1_chr1_+_147374945_147374945	0.0259764	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg19_v1_chr13_+_58205788_58205788	0.0259684	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr20_-_44006876_44007032	0.0259557	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg19_v1_chr16_-_48419148_48419357	0.0259474	SOX2.p2	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg19_v1_chr12_-_8043743_8043794	0.0259327	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v1_chr12_-_102874340_102874344	0.0259264	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr4_-_111563278_111563278	0.0259241	SOX2.p2	NM_001204397|PITX2|5308|paired-like homeodomain 2	NM_001204398|PITX2|5308|paired-like homeodomain 2	NM_001204399|PITX2|5308|paired-like homeodomain 2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2
hg19_v1_chr6_-_30655671_30655671	0.0259232	SOX2.p2	AK124880|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_133471|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr7_+_94292816_94292946	0.0258803	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr5_-_149792370_149792531	0.0258737	SOX2.p2	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg19_v1_chr1_-_167523016_167523110	0.0258462	SOX2.p2	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr12_-_106641675_106642020	0.0257944	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg19_v1_chr1_+_84864214_84864259	0.0257727	SOX2.p2	AF274571|DNASE2B|58511|deoxyribonuclease II beta	NM_021233|DNASE2B|58511|deoxyribonuclease II beta	BC126136|DNASE2B|58511|deoxyribonuclease II beta	BC126138|DNASE2B|58511|deoxyribonuclease II beta	HQ258219|DNASE2B|58511|deoxyribonuclease II beta
hg19_v1_chr11_-_67442086_67442176	0.025752	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg19_v1_chr11_+_62186506_62186567	0.0257449	SOX2.p2	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)
hg19_v1_chr4_+_41614933_41615091	0.0257282	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr20_+_30598244_30598252	0.0257203	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg19_v1_chr4_-_24586015_24586137	0.0257201	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr10_-_5060191_5060206	0.025686	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr6_+_111135823_111135843	0.025683	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg19_v1_chr14_+_69658193_69658214	0.0256642	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr1_-_17764811_17764913	0.0256588	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr1_-_154842725_154842767	0.0255634	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v1_chr3_-_193096513_193096631	0.0255549	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg19_v1_chr1_+_87012758_87012925	0.0255463	SOX2.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	HQ258531|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg19_v1_chr8_-_110661007_110661131	0.0254992	SOX2.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr21_-_43299407_43299590	0.0253977	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg19_v1_chr4_-_89080010_89080065	0.0253836	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr4_+_30722191_30722198	0.025335	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg19_v1_chr15_+_51973549_51973713	0.0253143	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chrX_+_28605558_28605680	0.02526	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr8_+_145064583_145064643	0.0252532	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr1_+_151032880_151032893	0.0252311	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr10_+_49514652_49514920	0.0252008	SOX2.p2	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg19_v1_chr10_-_76868853_76868975	0.0251947	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg19_v1_chr2_+_234600320_234600347	0.0251924	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v1_chr5_-_71803119_71803248	0.0250938	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg19_v1_chr3_-_57312979_57312979	0.0250906	SOX2.p2	AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14	BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg19_v1_chr4_-_24586178_24586200	0.025065	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr7_-_156802553_156802679	0.0250408	SOX2.p2	X56537|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr10_+_102759232_102759264	0.0249978	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr19_-_51530781_51530884	0.0249803	SOX2.p2	AY359014|KLK11|11012|kallikrein-related peptidase 11	AB012917|KLK11|11012|kallikrein-related peptidase 11	BC015551|KLK11|11012|kallikrein-related peptidase 11	AB041036|KLK11|11012|kallikrein-related peptidase 11	NM_144947|KLK11|11012|kallikrein-related peptidase 11
hg19_v1_chr3_-_155394104_155394204	0.0249655	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr11_+_57365577_57365767	0.0249332	SOX2.p2	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chrX_-_20159757_20159995	0.0249014	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg19_v1_chr11_+_112831968_112832006	0.0248358	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_001242607|NCAM1|4684|neural cell adhesion molecule 1	NM_001242608|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr22_-_50524357_50524357	0.0248209	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr5_-_27038650_27038692	0.0248181	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg19_v1_chr15_-_86338178_86338212	0.0248095	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg19_v1_chr8_-_124054491_124054524	0.024792	SOX2.p2	BC002457|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr10_+_97803064_97803699	0.0247815	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr2_-_163008913_163008913	0.0247814	SOX2.p2	NM_002054|GCG|2641|glucagon
hg19_v1_chr5_-_35118223_35118223	0.0247557	SOX2.p2	NM_001204314|PRLR|5618|prolactin receptor	NM_001204315|PRLR|5618|prolactin receptor	NM_001204316|PRLR|5618|prolactin receptor	NM_001204317|PRLR|5618|prolactin receptor	NM_001204318|PRLR|5618|prolactin receptor
hg19_v1_chr18_+_13611664_13611664	0.0247324	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg19_v1_chr10_+_91461333_91461418	0.0246957	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg19_v1_chr1_+_100315806_100316044	0.0246528	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr14_-_23445885_23445986	0.0246336	SOX2.p2	AK025567|AJUBA|84962|ajuba LIM protein
hg19_v1_chr1_+_120254418_120254645	0.0246301	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr7_+_129008044_129008133	0.0246195	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr1_+_67632168_67632168	0.0245377	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg19_v1_chr12_-_16758312_16758338	0.0245135	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr4_-_54424345_54424355	0.0244579	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr10_-_21435487_21435487	0.0244427	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg19_v1_chr19_+_11649578_11649740	0.0244422	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle
hg19_v1_chr9_+_27524311_27524334	0.0244292	SOX2.p2	AF146759|IFNK|56832|interferon, kappa	AF315688|IFNK|56832|interferon, kappa	NM_020124|IFNK|56832|interferon, kappa	AY358855|IFNK|56832|interferon, kappa
hg19_v1_chr5_-_142000899_142000906	0.0244277	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr17_-_43510204_43510250	0.0244031	SOX2.p2	AK290650|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr8_-_105601234_105601261	0.024373	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr1_-_23886284_23886284	0.0243221	SOX2.p2	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr14_-_55878537_55878575	0.0243091	SOX2.p2	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg19_v1_chrX_+_89176939_89177084	0.0243089	SOX2.p2	BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked
hg19_v1_chrX_+_99899162_99899303	0.0243047	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr5_+_78531848_78531934	0.0242853	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg19_v1_chr17_+_27369917_27369917	0.0242417	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr1_+_110026452_110026641	0.0242366	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg19_v1_chr3_-_69129502_69129544	0.0242255	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr15_-_41836442_41836456	0.0241845	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr15_-_40401041_40401149	0.0241474	SOX2.p2	BC060783|BMF|90427|Bcl2 modifying factor	BC070043|BMF|90427|Bcl2 modifying factor	NM_001003940|BMF|90427|Bcl2 modifying factor
hg19_v1_chr15_+_82944821_82944960	0.0241384	SOX2.p2	BC007811|AGSK1|80154|golgin subfamily A member 2-like	BC065260|AGSK1|80154|golgin subfamily A member 2-like	AK311124|AGSK1|80154|golgin subfamily A member 2-like	AK311170|AGSK1|80154|golgin subfamily A member 2-like	AK026448|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr1_+_153606550_153606574	0.0240997	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr13_-_36050758_36050835	0.0240496	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg19_v1_chr6_-_86351156_86351168	0.0240487	SOX2.p2	AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v1_chr2_+_66662516_66662531	0.0239971	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg19_v1_chr21_-_33104387_33104399	0.0239576	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr3_-_57583080_57583087	0.0239506	SOX2.p2	BC008753|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr7_+_2671582_2671624	0.0239389	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr3_+_108855560_108855566	0.0239256	SOX2.p2	AK026416|FLJ22763|401081|uncharacterized LOC401081
hg19_v1_chr8_+_144295067_144295142	0.0239002	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg19_v1_chr18_+_61370193_61370193	0.0238905	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg19_v1_chr22_+_38599026_38599026	0.0238833	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr10_+_102106771_102106912	0.0238785	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chr16_+_76311175_76311305	0.0238391	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg19_v1_chr7_-_99698278_99698385	0.0238202	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr9_+_35042222_35042262	0.0237688	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr1_-_234743488_234743564	0.0237553	SOX2.p2	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2
hg19_v1_chr5_-_149466173_149466293	0.0237423	SOX2.p2	BC047521|CSF1R|1436|colony stimulating factor 1 receptor	AK304491|CSF1R|1436|colony stimulating factor 1 receptor	M25786|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr9_-_127269689_127269719	0.0237121	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg19_v1_chr10_+_102759607_102759686	0.0236957	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg19_v1_chr10_-_99052429_99052449	0.0236735	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19	NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chrX_+_41192650_41192650	0.0236693	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chrX_+_44732402_44732470	0.0236146	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg19_v1_chr16_+_67465019_67465041	0.0236001	SOX2.p2	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2
hg19_v1_chr1_+_151032866_151032873	0.0235879	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr19_+_1026608_1026612	0.0235059	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg19_v1_chr8_-_21645670_21645915	0.0234965	SOX2.p2	AY326396|GFRA2|2675|GDNF family receptor alpha 2	AY941828|GFRA2|2675|GDNF family receptor alpha 2	U93703|GFRA2|2675|GDNF family receptor alpha 2	AF002700|GFRA2|2675|GDNF family receptor alpha 2	AK299623|GFRA2|2675|GDNF family receptor alpha 2	U97145|GFRA2|2675|GDNF family receptor alpha 2
hg19_v1_chr4_+_30721865_30722133	0.0234588	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr1_+_119911395_119911493	0.0234403	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg19_v1_chr5_+_72469022_72469040	0.0234361	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg19_v1_chr5_-_33891967_33892123	0.0233518	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr2_+_16080639_16080737	0.0232312	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr1_-_51787881_51787937	0.0232168	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg19_v1_chr10_-_103540125_103540125	0.0230797	SOX2.p2	NM_001206389|FGF8|2253|fibroblast growth factor 8 (androgen-induced)
hg19_v1_chr12_+_48516428_48516562	0.0230729	SOX2.p2	D21861|PFKM|5213|phosphofructokinase, muscle	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg19_v1_chr6_+_29364331_29364476	0.0230422	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg19_v1_chrX_+_119495939_119496021	0.0230274	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg19_v1_chr12_+_498513_498560	0.0229822	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr11_-_119234859_119234906	0.0229724	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr2_+_48757063_48757180	0.0229514	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg19_v1_chr9_+_112403067_112403071	0.0229432	SOX2.p2	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg19_v1_chr11_+_61735217_61735452	0.0229305	SOX2.p2	AK093779|LOC399900|399900|uncharacterized LOC399900	BC132894|LOC399900|399900|uncharacterized LOC399900	BC132896|LOC399900|399900|uncharacterized LOC399900
hg19_v1_chr5_+_34656482_34656543	0.0228698	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_+_151032683_151032861	0.0228569	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr5_-_74062885_74063041	0.0227955	SOX2.p2	AK307839|GFM2|84340|G elongation factor, mitochondrial 2	BC015712|GFM2|84340|G elongation factor, mitochondrial 2	AY453587|GFM2|84340|G elongation factor, mitochondrial 2	BC030612|GFM2|84340|G elongation factor, mitochondrial 2	AK308422|GFM2|84340|G elongation factor, mitochondrial 2	AF111808|GFM2|84340|G elongation factor, mitochondrial 2	AK025314|GFM2|84340|G elongation factor, mitochondrial 2	AK315705|GFM2|84340|G elongation factor, mitochondrial 2	AF367997|GFM2|84340|G elongation factor, mitochondrial 2	NM_032380|GFM2|84340|G elongation factor, mitochondrial 2	NM_170681|GFM2|84340|G elongation factor, mitochondrial 2	NM_170691|GFM2|84340|G elongation factor, mitochondrial 2
hg19_v1_chr17_-_17480325_17480354	0.0227464	SOX2.p2	CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr6_+_56954801_56954828	0.0227354	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg19_v1_chr5_-_149792276_149792331	0.022732	SOX2.p2	BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK308929|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg19_v1_chr21_-_42218587_42218650	0.0227076	SOX2.p2	AB209136|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr4_-_164534656_164534775	0.0226785	SOX2.p2	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr20_+_35202956_35202956	0.0226512	SOX2.p2	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2	NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough
hg19_v1_chr4_+_81118639_81118670	0.0226127	SOX2.p2	NM_001099403|PRDM8|56978|PR domain containing 8	BC071584|PRDM8|56978|PR domain containing 8	AK292137|PRDM8|56978|PR domain containing 8	BC027929|PRDM8|56978|PR domain containing 8
hg19_v1_chr2_-_203776948_203776948	0.0226086	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chr11_-_118084073_118084073	0.0224883	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr4_+_140586921_140587059	0.0224356	SOX2.p2	NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2	NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2	NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg19_v1_chr4_-_83347778_83347787	0.0224355	SOX2.p2	AK057480|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr10_-_108924287_108924465	0.0223572	SOX2.p2	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg19_v1_chr7_-_32110979_32111044	0.0223544	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v1_chr14_+_37667148_37667292	0.022336	SOX2.p2	BC035870|MIPOL1|145282|mirror-image polydactyly 1	BX537396|MIPOL1|145282|mirror-image polydactyly 1	AK291850|MIPOL1|145282|mirror-image polydactyly 1	BC036523|MIPOL1|145282|mirror-image polydactyly 1	BC036124|MIPOL1|145282|mirror-image polydactyly 1	BX647795|MIPOL1|145282|mirror-image polydactyly 1	AY059470|MIPOL1|145282|mirror-image polydactyly 1
hg19_v1_chr11_+_63753902_63753938	0.0223268	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr17_-_2240677_2240800	0.0223047	SOX2.p2	NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v1_chr2_-_107502609_107502630	0.0222985	SOX2.p2	AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v1_chr7_+_94292737_94292755	0.0222973	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chr1_+_111413820_111413838	0.022288	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg19_v1_chr11_-_104769396_104769396	0.0222872	SOX2.p2	AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)	AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)	AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)	NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)
hg19_v1_chr10_+_90424145_90424215	0.0222597	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg19_v1_chr4_+_78432905_78432906	0.0221606	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg19_v1_chr14_-_81687265_81687295	0.0221084	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg19_v1_chr5_+_132009372_132009372	0.0220488	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg19_v1_chr12_-_113909876_113909876	0.0220176	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg19_v1_chr7_+_73703704_73703871	0.0220084	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg19_v1_chrX_-_15332680_15332680	0.0219881	SOX2.p2	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr7_-_142583260_142583506	0.0219559	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg19_v1_chr7_+_123249076_123249111	0.0219332	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg19_v1_chr21_+_37536838_37536838	0.0218105	SOX2.p2	AJ237839|DOPEY2|9980|dopey family member 2	NM_005128|DOPEY2|9980|dopey family member 2
hg19_v1_chr5_+_149980627_149980657	0.0218007	SOX2.p2	AL831818|SYNPO|11346|synaptopodin	NM_001166208|SYNPO|11346|synaptopodin
hg19_v1_chr7_-_83270746_83270746	0.0217752	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr4_+_106631966_106631969	0.0217678	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr12_-_114841702_114841706	0.0216852	SOX2.p2	NM_080718|TBX5|6910|T-box 5	U80987|TBX5|6910|T-box 5	U89353|TBX5|6910|T-box 5	EU446658|TBX5|6910|T-box 5
hg19_v1_chr17_+_38375554_38375674	0.0216822	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg19_v1_chr1_+_19971865_19971865	0.0216746	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr22_+_20377668_20377668	0.0215809	SOX2.p2	NM_001242313|TMEM191B|728229|transmembrane protein 191B
hg19_v1_chr5_+_69321071_69321259	0.0215615	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr17_-_39780762_39780881	0.0214963	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg19_v1_chr1_+_11539177_11539294	0.021493	SOX2.p2	AB593117|PTCHD2|57540|patched domain containing 2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg19_v1_chr3_+_114012832_114012875	0.0214781	SOX2.p2	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains
hg19_v1_chr7_-_158611301_158611440	0.0214405	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg19_v1_chrX_-_131573638_131573717	0.0214264	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg19_v1_chr15_+_82944772_82944812	0.0213986	SOX2.p2	AK309746|AGSK1|80154|golgin subfamily A member 2-like	AK310769|AGSK1|80154|golgin subfamily A member 2-like	BC072390|AGSK1|80154|golgin subfamily A member 2-like	AK291684|AGSK1|80154|golgin subfamily A member 2-like	AK309420|AGSK1|80154|golgin subfamily A member 2-like	AK309732|AGSK1|80154|golgin subfamily A member 2-like	AK307285|AGSK1|80154|golgin subfamily A member 2-like
hg19_v1_chr7_-_156803224_156803366	0.0212912	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr14_-_38064440_38064488	0.0212584	SOX2.p2	NM_004496|FOXA1|3169|forkhead box A1
hg19_v1_chr1_+_22778343_22778346	0.0212548	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr8_+_85095702_85095768	0.021242	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chrX_-_117250624_117250827	0.0211924	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr19_+_4402658_4402775	0.0211314	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chr1_-_153643417_153643427	0.0211139	SOX2.p2	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr8_+_7353367_7353467	0.0210738	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg19_v1_chr3_+_57094468_57094539	0.0210607	SOX2.p2	AY221117|SPATA12|353324|spermatogenesis associated 12	NM_181727|SPATA12|353324|spermatogenesis associated 12	BC126274|SPATA12|353324|spermatogenesis associated 12	BC136498|SPATA12|353324|spermatogenesis associated 12
hg19_v1_chr4_+_54243810_54243821	0.0210598	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr20_+_58179601_58179708	0.0210419	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg19_v1_chr11_+_63754300_63754327	0.0209774	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr5_-_39203061_39203174	0.0209556	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg19_v1_chr17_-_39197663_39197712	0.0209022	SOX2.p2	AB055057|KRTAP1-1|81851|keratin associated protein 1-1	BC101152|KRTAP1-3|81850|keratin associated protein 1-3	AJ406926|KRTAP1-1|81851|keratin associated protein 1-1	BC105069|KRTAP1-1|81851|keratin associated protein 1-1	BC105071|KRTAP1-1|81851|keratin associated protein 1-1	BC069321|KRTAP1-1|81851|keratin associated protein 1-1	BC069450|KRTAP1-1|81851|keratin associated protein 1-1	AB052868|KRTAP1-1|81851|keratin associated protein 1-1	AB052934|KRTAP1-1|81851|keratin associated protein 1-1	NM_030967|KRTAP1-1|81851|keratin associated protein 1-1
hg19_v1_chrX_-_74145280_74145319	0.0208672	SOX2.p2	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg19_v1_chr1_-_217113007_217113016	0.0208617	SOX2.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr12_+_69979202_69979247	0.0208411	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr19_-_56249739_56249767	0.0208221	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg19_v1_chr6_-_55740358_55740374	0.020788	SOX2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg19_v1_chr9_+_131644780_131644780	0.0207808	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr4_+_47487230_47487431	0.0207672	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg19_v1_chr11_-_57089670_57089823	0.0207642	SOX2.p2	AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa
hg19_v1_chr9_+_40700290_40700290	0.0207621	SOX2.p2	NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3
hg19_v1_chr4_+_84457390_84457772	0.0207421	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v1_chr9_+_77112251_77112298	0.0207238	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr12_+_56360547_56360632	0.0207141	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr19_+_7701976_7702009	0.0206823	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg19_v1_chr12_+_57943843_57944051	0.0206709	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr13_-_21635629_21635702	0.0206637	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr6_-_132834165_132834336	0.0206537	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr7_-_155326538_155326556	0.0206312	SOX2.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg19_v1_chr1_+_154947116_154947142	0.0205953	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg19_v1_chr15_-_45670955_45670979	0.0205841	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v1_chr14_-_35344852_35344852	0.0205551	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr12_-_99548471_99548644	0.0205489	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr1_-_2461683_2461683	0.0205017	SOX2.p2	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)	DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)	NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)
hg19_v1_chr1_-_153643433_153643454	0.020484	SOX2.p2	U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr2_-_39664291_39664311	0.0204197	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr16_-_28550227_28550317	0.0204063	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg19_v1_chr6_+_13925097_13925235	0.0203998	SOX2.p2	NM_001165032|RNF182|221687|ring finger protein 182	NM_152737|RNF182|221687|ring finger protein 182	AK315528|RNF182|221687|ring finger protein 182	BC030666|RNF182|221687|ring finger protein 182	BC050030|RNF182|221687|ring finger protein 182
hg19_v1_chr1_-_228604582_228604588	0.0203883	SOX2.p2	NM_001024940|TRIM17|51127|tripartite motif containing 17	NM_001134855|TRIM17|51127|tripartite motif containing 17	NM_016102|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr6_+_26251826_26251878	0.0203777	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr5_-_131879172_131879213	0.0203608	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg19_v1_chr8_-_145838887_145838887	0.0203547	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg19_v1_chr20_+_44036940_44037106	0.0203267	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr21_-_34185943_34186052	0.0202814	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg19_v1_chr5_+_121647773_121647943	0.0202284	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr19_+_45394459_45394509	0.0202276	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v1_chr12_-_58146025_58146107	0.0202138	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr6_-_29323971_29324053	0.0201992	SOX2.p2	BC069149|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	AJ459859|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1	NM_030876|OR5V1|81696|olfactory receptor, family 5, subfamily V, member 1
hg19_v1_chr2_+_113735595_113735608	0.0201505	SOX2.p2	AY359111|IL36G|56300|interleukin 36, gamma	AF200492|IL36G|56300|interleukin 36, gamma	NM_019618|IL36G|56300|interleukin 36, gamma	AF206696|IL36G|56300|interleukin 36, gamma
hg19_v1_chr1_-_153643428_153643432	0.0201169	SOX2.p2	BC000382|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr8_-_124054591_124054647	0.0201127	SOX2.p2	NM_001134671|DERL1|79139|Der1-like domain family, member 1	NM_024295|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr19_+_3880617_3880653	0.0201058	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr1_+_167298280_167298317	0.0200972	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg19_v1_chr11_+_112047088_112047122	0.0200765	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg19_v1_chr9_-_123689172_123689172	0.0200762	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg19_v1_chr17_-_39041436_39041497	0.020076	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg19_v1_chr1_-_153643456_153643471	0.020041	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr20_-_22564893_22564939	0.0200219	SOX2.p2	BC006545|FOXA2|3170|forkhead box A2	BC019288|FOXA2|3170|forkhead box A2	DQ892883|FOXA2|3170|forkhead box A2	DQ896132|FOXA2|3170|forkhead box A2	AK301611|FOXA2|3170|forkhead box A2	BC011780|FOXA2|3170|forkhead box A2
hg19_v1_chr7_-_37488554_37488556	0.0199885	SOX2.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr9_-_114521792_114521812	0.0199674	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg19_v1_chr5_+_40841296_40841589	0.0199563	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg19_v1_chr3_+_38495778_38495809	0.0199345	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg19_v1_chr14_-_88737160_88737273	0.0198877	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr3_-_160283361_160283416	0.0198325	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr20_+_44036628_44036628	0.0197888	SOX2.p2	NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr11_-_2925174_2925174	0.0197185	SOX2.p2	NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense
hg19_v1_chrY_+_15016018_15016018	0.0196679	SOX2.p2	BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
hg19_v1_chr14_+_24540742_24540797	0.0196355	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg19_v1_chr17_+_38474513_38474536	0.0196334	SOX2.p2	AK292205|RARA|5914|retinoic acid receptor, alpha	FJ487576|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr7_+_39663257_39663359	0.019609	SOX2.p2	AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr10_+_96443250_96443576	0.0195849	SOX2.p2	NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v1_chr21_+_47269874_47269903	0.0195243	SOX2.p2	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg19_v1_chr4_-_120549115_120549238	0.0195142	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr1_-_115053677_115053743	0.0195075	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg19_v1_chr22_+_26825220_26825428	0.0194843	SOX2.p2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg19_v1_chr11_+_101983170_101983244	0.0194741	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr10_-_113943467_113943544	0.0194088	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v1_chr11_+_109292837_109292850	0.0193866	SOX2.p2	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg19_v1_chr10_-_52645384_52645402	0.0193658	SOX2.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr10_-_74114655_74114701	0.0193483	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg19_v1_chr9_+_125796845_125796845	0.0193373	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr17_+_37896219_37896219	0.0193114	SOX2.p2	AK290115|GRB7|2886|growth factor receptor-bound protein 7	NM_001242443|GRB7|2886|growth factor receptor-bound protein 7
hg19_v1_chr11_+_61008643_61008668	0.0192889	SOX2.p2	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)
hg19_v1_chr12_+_69633352_69633426	0.0192771	SOX2.p2	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr9_+_116356199_116356222	0.0192568	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr8_-_22550708_22550861	0.0192549	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg19_v1_chr17_-_46703613_46703964	0.0192312	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg19_v1_chr6_+_144185572_144185572	0.0192203	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg19_v1_chr6_-_31509725_31509767	0.0191947	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr3_+_75713480_75713486	0.0191895	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg19_v1_chr6_+_71136141_71136173	0.0191703	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr18_+_55711388_55711685	0.0191544	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr10_-_128209996_128210009	0.019133	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg19_v1_chr4_-_174450529_174450571	0.0191262	SOX2.p2	BC101406|HAND2|9464|heart and neural crest derivatives expressed 2	BC101974|HAND2|9464|heart and neural crest derivatives expressed 2	BC109383|HAND2|9464|heart and neural crest derivatives expressed 2
hg19_v1_chr22_-_50221445_50221517	0.0191219	SOX2.p2	AK304776|BRD1|23774|bromodomain containing 1
hg19_v1_chr4_+_54243731_54243808	0.0191211	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr5_-_77844975_77845071	0.0190489	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr3_+_193310921_193310989	0.0190409	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr19_+_10764987_10765105	0.0190291	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr1_-_177133818_177133833	0.0190188	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg19_v1_chr1_+_50574589_50574594	0.0190131	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr1_-_25747276_25747404	0.0190127	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chr5_-_100238870_100238987	0.0189512	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v1_chr5_-_110062365_110062449	0.0189419	SOX2.p2	AK296542|TMEM232|642987|transmembrane protein 232	BC042563|TMEM232|642987|transmembrane protein 232	BX648527|TMEM232|642987|transmembrane protein 232	NM_001039763|TMEM232|642987|transmembrane protein 232
hg19_v1_chr14_+_69658482_69658551	0.0189408	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chrX_-_154563735_154563985	0.0189127	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg19_v1_chr2_+_202047803_202047917	0.0188983	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr11_-_85397215_85397319	0.0188916	SOX2.p2	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg19_v1_chr14_-_23288912_23289019	0.0188776	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v1_chr12_-_62997207_62997213	0.018855	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg19_v1_chr3_-_57583090_57583148	0.0187614	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr5_+_60933635_60933635	0.0187423	SOX2.p2	AK094862|C5orf64|285668|chromosome 5 open reading frame 64	NM_173667|C5orf64|285668|chromosome 5 open reading frame 64
hg19_v1_chr4_+_54243822_54243828	0.0187422	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr13_-_31039966_31040021	0.018721	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr3_-_160283311_160283329	0.0187175	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr22_-_50523780_50523829	0.0186712	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chrY_+_20137666_20137693	0.0186504	SOX2.p2	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr3_-_143567163_143567372	0.0186481	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg19_v1_chr6_-_29644930_29644930	0.0186264	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg19_v1_chr11_-_3013522_3013529	0.0186087	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr8_-_124054540_124054541	0.0185931	SOX2.p2	AY358818|DERL1|79139|Der1-like domain family, member 1	AK303826|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr2_-_209028288_209028365	0.0185747	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg19_v1_chr1_-_153643474_153643506	0.0185396	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr1_-_149859465_149859562	0.0185222	SOX2.p2	NM_175065|HIST2H2AB|317772|histone cluster 2, H2ab	AK289725|HIST2H2BE|8349|histone cluster 2, H2be
hg19_v1_chr3_+_179280686_179280733	0.0185108	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg19_v1_chr12_+_52347163_52347163	0.0184992	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg19_v1_chrX_-_2882288_2882493	0.0184613	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg19_v1_chr3_+_140770412_140770545	0.0184256	SOX2.p2	BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr1_+_159557615_159557711	0.0184256	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg19_v1_chr3_+_42201658_42201853	0.0184212	SOX2.p2	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1	NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1	BC015922|TRAK1|22906|trafficking protein, kinesin binding 1	AK000754|TRAK1|22906|trafficking protein, kinesin binding 1	AM392573|TRAK1|22906|trafficking protein, kinesin binding 1	AM393596|TRAK1|22906|trafficking protein, kinesin binding 1	EU446989|TRAK1|22906|trafficking protein, kinesin binding 1
hg19_v1_chr2_-_232326394_232326465	0.0184153	SOX2.p2	AK001314|NCL|4691|nucleolin
hg19_v1_chr17_-_5372235_5372379	0.0184129	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_001199699|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr11_-_125550674_125550792	0.018403	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1
hg19_v1_chr10_-_99052391_99052427	0.0183747	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr11_-_59383179_59383242	0.0183692	SOX2.p2	BC011581|OSBP|5007|oxysterol binding protein
hg19_v1_chr12_-_8693391_8693558	0.0183683	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg19_v1_chrY_+_16733900_16733920	0.0183481	SOX2.p2	NM_001164238|NLGN4Y|22829|neuroligin 4, Y-linked	BC113525|NLGN4Y|22829|neuroligin 4, Y-linked	BC113551|NLGN4Y|22829|neuroligin 4, Y-linked
hg19_v1_chr22_-_50523737_50523742	0.018321	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v1_chr19_-_14629227_14629233	0.018263	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr9_+_116263706_116263856	0.0182347	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr5_+_61874561_61874716	0.0181708	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg19_v1_chr1_+_2938045_2938065	0.018157	SOX2.p2	NM_080431|ACTRT2|140625|actin-related protein T2	AK058153|ACTRT2|140625|actin-related protein T2	AK314500|ACTRT2|140625|actin-related protein T2	BC029499|ACTRT2|140625|actin-related protein T2
hg19_v1_chr2_+_101869350_101869435	0.0181542	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr19_+_34710327_34710434	0.0181356	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v1_chr7_-_100061893_100061893	0.0181119	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg19_v1_chr2_-_172290435_172290618	0.0180837	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg19_v1_chr15_+_43663350_43663552	0.0180769	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg19_v1_chr10_-_99052358_99052390	0.0180694	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr3_-_47823304_47823332	0.0180636	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr16_-_11367451_11367451	0.0180234	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg19_v1_chr1_-_221910801_221910801	0.0180001	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg19_v1_chr1_+_19972259_19972259	0.0179872	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr3_+_1134619_1134707	0.0179294	SOX2.p2	AK314220|CNTN6|27255|contactin 6	BC036338|CNTN6|27255|contactin 6	AB003592|CNTN6|27255|contactin 6	NM_014461|CNTN6|27255|contactin 6	BC113118|CNTN6|27255|contactin 6	AK307814|CNTN6|27255|contactin 6
hg19_v1_chr3_+_97158453_97158489	0.0179249	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg19_v1_chr11_-_10830452_10830503	0.0179219	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr21_-_34143978_34144171	0.0179157	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg19_v1_chr4_+_54966197_54966247	0.0179059	SOX2.p2	AB028838|GSX2|170825|GS homeobox 2	EU596451|GSX2|170825|GS homeobox 2	NM_133267|GSX2|170825|GS homeobox 2
hg19_v1_chr6_+_25279651_25279666	0.0178853	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr2_+_173420873_173420878	0.0178773	SOX2.p2	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg19_v1_chr3_-_69171536_69171745	0.0178763	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg19_v1_chr2_-_206950895_206950927	0.0178638	SOX2.p2	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg19_v1_chr15_-_86338017_86338177	0.0178514	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg19_v1_chr8_+_76452202_76452227	0.0178464	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma	HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr6_+_123317377_123317389	0.0178289	SOX2.p2	AK295158|CLVS2|134829|clavesin 2
hg19_v1_chr2_-_208989081_208989312	0.0178268	SOX2.p2	HQ258094|CRYGD|1421|crystallin, gamma D	U66583|CRYGD|1421|crystallin, gamma D	BC117338|CRYGD|1421|crystallin, gamma D	BC117340|CRYGD|1421|crystallin, gamma D	NM_006891|CRYGD|1421|crystallin, gamma D
hg19_v1_chr1_-_109935869_109935978	0.0177565	SOX2.p2	AK310147|SORT1|6272|sortilin 1	AK301548|SORT1|6272|sortilin 1	NM_001205228|SORT1|6272|sortilin 1
hg19_v1_chr2_-_208031570_208031680	0.0177288	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg19_v1_chr8_+_23104153_23104332	0.0177196	SOX2.p2	AK092500|CHMP7|91782|charged multivesicular body protein 7	AL833843|CHMP7|91782|charged multivesicular body protein 7	BC019110|CHMP7|91782|charged multivesicular body protein 7	AK296592|CHMP7|91782|charged multivesicular body protein 7	BC004344|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr7_-_105162551_105162772	0.0176112	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg19_v1_chr13_-_84456424_84456427	0.0175521	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg19_v1_chr3_-_165555167_165555220	0.0175316	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr7_-_73256838_73256886	0.0175264	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg19_v1_chr2_+_148602569_148602721	0.0174995	SOX2.p2	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	D31770|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr19_+_50192440_50192561	0.0174787	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr20_+_32319765_32319827	0.0174734	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341	HQ258664|ZNF341|84905|zinc finger protein 341
hg19_v1_chr4_-_15003668_15003751	0.0174674	SOX2.p2	BC039114|LOC441009|441009|uncharacterized LOC441009	BC044764|LOC441009|441009|uncharacterized LOC441009	BC047127|LOC441009|441009|uncharacterized LOC441009
hg19_v1_chr1_+_203096835_203096860	0.0174052	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg19_v1_chr1_-_43424536_43424608	0.0173713	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr22_+_50609159_50609189	0.0173401	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg19_v1_chr19_+_10764896_10764985	0.0173357	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr2_+_68694669_68694860	0.0173169	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg19_v1_chr17_+_74261280_74261289	0.0173082	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr18_-_31802433_31802433	0.017298	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg19_v1_chr15_-_90347534_90347606	0.0172764	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg19_v1_chr19_+_18496966_18496999	0.0172548	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg19_v1_chr6_+_41040891_41040960	0.0172544	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr22_+_27017927_27017935	0.0172085	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg19_v1_chr11_-_10830299_10830450	0.0172066	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr11_+_112832089_112832174	0.0172016	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr4_-_109089444_109090154	0.0171488	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr4_-_190948396_190948411	0.0171076	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	NM_001005217|FRG2|448831|FSHD region gene 2	NM_001199232|LOC100288255|100288255|FSHD region gene 2-like
hg19_v1_chr13_-_30169584_30169658	0.0171025	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v1_chr11_-_130184459_130184606	0.0170418	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg19_v1_chr18_-_74207145_74207166	0.0170138	SOX2.p2	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg19_v1_chr1_-_52520768_52520888	0.0170118	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr12_-_58146118_58146229	0.0170075	SOX2.p2	BC005864|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr2_+_169312755_169312764	0.0170013	SOX2.p2	AK172775|CERS6|253782|ceramide synthase 6
hg19_v1_chr6_+_25279765_25280023	0.016993	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr8_-_7274353_7274353	0.016962	SOX2.p2	NM_001205266|DEFB4B|100289462|defensin, beta 4B
hg19_v1_chr12_-_109027615_109027651	0.0169619	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg19_v1_chr4_+_39408472_39408496	0.0169365	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg19_v1_chr13_-_25496913_25497026	0.0169339	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg19_v1_chr5_-_83016850_83017019	0.0169335	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg19_v1_chr1_+_45792544_45792576	0.0169223	SOX2.p2	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg19_v1_chr22_-_20104428_20104538	0.0169065	SOX2.p2	BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr17_-_56296965_56296965	0.0168967	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg19_v1_chr18_-_22932109_22932217	0.0168597	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr11_-_3013550_3013560	0.0168238	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr9_+_116342939_116342939	0.0168195	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr3_+_57743027_57743378	0.0168158	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg19_v1_chr12_+_75728418_75728507	0.0168118	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg19_v1_chr3_+_178276487_178276617	0.0168046	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr3_-_62860561_62860703	0.0168023	SOX2.p2	
hg19_v1_chr8_+_85095452_85095466	0.016796	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr10_+_71562275_71562307	0.0167848	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg19_v1_chr15_+_75491232_75491261	0.0167676	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg19_v1_chr16_+_14294186_14294210	0.0167467	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg19_v1_chr1_-_224621714_224621807	0.0167437	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg19_v1_chr13_+_24553919_24553948	0.0167425	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr7_+_87563432_87563734	0.0166961	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg19_v1_chr7_+_128095881_128096051	0.0166929	SOX2.p2	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated	NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated	AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated
hg19_v1_chr3_+_25469749_25469769	0.0166606	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr9_+_137772653_137772667	0.016638	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg19_v1_chr11_-_126081532_126081586	0.0166182	SOX2.p2	AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4
hg19_v1_chr3_+_14860468_14860468	0.0165898	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg19_v1_chr14_-_91884164_91884187	0.0165844	SOX2.p2	NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr12_-_22089627_22089627	0.0165663	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v1_chr7_+_153584383_153584418	0.0165349	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chr2_+_14772839_14772864	0.0165275	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg19_v1_chr4_+_76649739_76649790	0.0165093	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr1_+_6684924_6684924	0.016455	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr5_-_1882764_1882879	0.0164192	SOX2.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg19_v1_chr14_+_32183774_32183774	0.0163901	SOX2.p2	AK093789|NUBPL|80224|nucleotide binding protein-like	NM_001201574|NUBPL|80224|nucleotide binding protein-like
hg19_v1_chr1_+_209859524_209859524	0.0163667	SOX2.p2	NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1	NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v1_chr13_-_39612246_39612261	0.0163633	SOX2.p2	NM_025138|PROSER1|80209|proline and serine rich 1	NM_170719|PROSER1|80209|proline and serine rich 1
hg19_v1_chr10_-_101190201_101190531	0.0163518	SOX2.p2	AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)
hg19_v1_chr10_+_114709963_114710641	0.0162918	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v1_chr19_-_49250023_49250167	0.0162751	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg19_v1_chr12_+_69979268_69979286	0.016265	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr3_-_55521567_55521669	0.0162329	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr7_+_129906702_129906727	0.0162112	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg19_v1_chrY_+_6778623_6778737	0.0161972	SOX2.p2	AK056903|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332220|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332221|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332222|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_033284|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_134258|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_134259|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AK298210|TBL1Y|90665|transducin (beta)-like 1, Y-linked
hg19_v1_chr16_+_88636810_88636811	0.0161847	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr11_+_111411232_111411232	0.0161741	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg19_v1_chr22_-_50221195_50221337	0.0161544	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg19_v1_chr3_-_57582866_57583075	0.0161334	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr2_+_204571379_204571419	0.0161129	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg19_v1_chr2_-_152955208_152955252	0.0161075	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr3_+_66119284_66119284	0.016105	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg19_v1_chr3_+_52813936_52813941	0.0160946	SOX2.p2	AK303156|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	NM_001166435|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	AK303110|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	NM_001166436|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1
hg19_v1_chr6_+_30688144_30688304	0.0160783	SOX2.p2	BC002347|TUBB|203068|tubulin, beta class I	BC007605|TUBB|203068|tubulin, beta class I	AB062393|TUBB|203068|tubulin, beta class I	BC001938|TUBB|203068|tubulin, beta class I	BC005838|TUBB|203068|tubulin, beta class I	AF070561|TUBB|203068|tubulin, beta class I	AF070593|TUBB|203068|tubulin, beta class I	BC013374|TUBB|203068|tubulin, beta class I	NM_178014|TUBB|203068|tubulin, beta class I	BC021909|TUBB|203068|tubulin, beta class I	BC019924|TUBB|203068|tubulin, beta class I	BC062532|TUBB|203068|tubulin, beta class I	AK297489|TUBB|203068|tubulin, beta class I	DQ891742|TUBB|203068|tubulin, beta class I	DQ891828|TUBB|203068|tubulin, beta class I	DQ894920|TUBB|203068|tubulin, beta class I	V00599|TUBB|203068|tubulin, beta class I
hg19_v1_chr1_-_47695442_47695442	0.0160605	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chr2_-_213403280_213403351	0.0160562	SOX2.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg19_v1_chr16_-_89007605_89007607	0.0160309	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v1_chr1_+_244214576_244214591	0.016022	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chrX_+_140084755_140084858	0.0159924	SOX2.p2	AF098307|SPANXB1|728695|SPANX family, member B1	AJ457796|SPANXF1|171490|SPANX family, member F1	NM_032461|SPANXB1|728695|SPANX family, member B1	NM_139019|SPANXF1|171490|SPANX family, member F1	NM_145664|SPANXB2|100133171|SPANX family, member B2	BC034472|SPANXB1|728695|SPANX family, member B1	BC137533|SPANXB1|728695|SPANX family, member B1	BC137536|SPANXB1|728695|SPANX family, member B1	DQ892330|SPANXB1|728695|SPANX family, member B1	DQ895534|SPANXB1|728695|SPANX family, member B1
hg19_v1_chr13_-_103719195_103719195	0.0159828	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg19_v1_chr7_+_29234111_29234135	0.0159717	SOX2.p2	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr8_+_23104120_23104150	0.0159345	SOX2.p2	AK315664|CHMP7|91782|charged multivesicular body protein 7	AK021776|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr21_-_16437125_16437309	0.0159175	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg19_v1_chr2_+_86947387_86947422	0.0158684	SOX2.p2	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr5_+_86564146_86564164	0.0158632	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr6_-_2842069_2842096	0.0158529	SOX2.p2	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg19_v1_chr7_-_148725500_148725610	0.0158398	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr9_+_2717525_2717525	0.0158394	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg19_v1_chr16_+_31085722_31085746	0.0158393	SOX2.p2	NM_014699|ZNF646|9726|zinc finger protein 646	AK304808|ZNF646|9726|zinc finger protein 646
hg19_v1_chr13_+_108955763_108955871	0.0158219	SOX2.p2	
hg19_v1_chr10_-_72142344_72142385	0.0157792	SOX2.p2	AK094734|LRRC20|55222|leucine rich repeat containing 20	AK001613|LRRC20|55222|leucine rich repeat containing 20	AK001706|LRRC20|55222|leucine rich repeat containing 20	NM_018205|LRRC20|55222|leucine rich repeat containing 20	NM_018239|LRRC20|55222|leucine rich repeat containing 20
hg19_v1_chr20_-_1472168_1472232	0.0157745	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr9_+_12774988_12775045	0.015761	SOX2.p2	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg19_v1_chr3_-_122102057_122102097	0.0157542	SOX2.p2	BC109378|CCDC58|131076|coiled-coil domain containing 58	BC054051|CCDC58|131076|coiled-coil domain containing 58	BC062725|CCDC58|131076|coiled-coil domain containing 58	NM_001017928|CCDC58|131076|coiled-coil domain containing 58
hg19_v1_chr5_-_83680590_83680738	0.0157475	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr4_-_120549827_120549980	0.0157317	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr2_+_32502971_32502978	0.0157233	SOX2.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr16_-_3930685_3930711	0.0156739	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg19_v1_chr19_+_55014012_55014134	0.0156476	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	HQ448404|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg19_v1_chr4_+_119809978_119810191	0.0156276	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg19_v1_chr9_-_37465384_37465406	0.0156182	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr21_-_42219038_42219064	0.0156001	SOX2.p2	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule	NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule	AF217525|DSCAM|1826|Down syndrome cell adhesion molecule
hg19_v1_chr3_-_168864066_168864092	0.0155913	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr7_+_114066554_114066706	0.0154889	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg19_v1_chr2_+_99953749_99954017	0.0154403	SOX2.p2	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg19_v1_chr17_+_39382878_39382907	0.0154092	SOX2.p2	BC117287|KRTAP9-2|83899|keratin associated protein 9-2	BC110619|KRTAP9-2|83899|keratin associated protein 9-2	AJ406946|KRTAP9-2|83899|keratin associated protein 9-2	NM_031961|KRTAP9-2|83899|keratin associated protein 9-2	BC069560|KRTAP9-2|83899|keratin associated protein 9-2
hg19_v1_chrX_+_16668280_16668314	0.0154052	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg19_v1_chr10_-_79628870_79628948	0.0153989	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg19_v1_chr7_+_26677489_26677489	0.0153396	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg19_v1_chr2_-_106810756_106810760	0.0153282	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr4_+_36285643_36285643	0.0152838	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg19_v1_chr2_+_27440233_27440275	0.0152507	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr1_+_205236591_205236677	0.0152217	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr1_-_152297678_152297678	0.0152154	SOX2.p2	L01090|FLG|2312|filaggrin	NM_002016|FLG|2312|filaggrin
hg19_v1_chr3_-_125820390_125820399	0.0152134	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr3_-_155421996_155421996	0.015184	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr5_+_53813494_53813596	0.0151584	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg19_v1_chr16_-_23521794_23521801	0.0151242	SOX2.p2	BC000284|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	AK308425|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr1_-_200379072_200379162	0.015083	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr6_+_42123143_42123183	0.0150792	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg19_v1_chr3_+_140770742_140770772	0.0150761	SOX2.p2	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr6_+_27107060_27107087	0.0150587	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	HQ257982|HIST2H4B|554313|histone cluster 2, H4b	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg19_v1_chr2_+_102927961_102928022	0.0150393	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg19_v1_chr16_+_67907018_67907035	0.0150348	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr1_-_11907741_11907842	0.015031	SOX2.p2	DQ893115|NPPA|4878|natriuretic peptide A	DQ896389|NPPA|4878|natriuretic peptide A	EU176780|NPPA|4878|natriuretic peptide A	M30262|NPPA|4878|natriuretic peptide A	BC005893|NPPA|4878|natriuretic peptide A	NM_006172|NPPA|4878|natriuretic peptide A
hg19_v1_chr1_-_234743820_234743842	0.0150141	SOX2.p2	
hg19_v1_chr6_-_71012750_71012850	0.0150071	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg19_v1_chr2_+_27440342_27440417	0.0149494	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr7_+_5632453_5632567	0.0149462	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr1_+_244214552_244214560	0.0149456	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr4_-_99851785_99851787	0.0149287	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr7_+_2671630_2671777	0.0149204	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr22_+_38598065_38598107	0.0149191	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr21_-_37948866_37948866	0.0148358	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg19_v1_chr10_+_97515408_97515672	0.0148342	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr11_-_75236418_75236598	0.014829	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg19_v1_chr20_+_61147924_61147984	0.0148266	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg19_v1_chr1_-_244006885_244006885	0.0148136	SOX2.p2	AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)	NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
hg19_v1_chr22_-_39151457_39151472	0.0148121	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2	NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2
hg19_v1_chr22_+_29279573_29279981	0.0147849	SOX2.p2	NM_001206998|ZNRF3|84133|zinc and ring finger 3	AB051436|ZNRF3|84133|zinc and ring finger 3	CR456397|ZNRF3|84133|zinc and ring finger 3
hg19_v1_chr15_-_76304762_76304784	0.014773	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg19_v1_chr2_+_119699744_119699897	0.0147647	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure
hg19_v1_chr22_-_38713217_38713366	0.0147573	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr15_-_43212911_43213053	0.0147499	SOX2.p2	AF525400|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg19_v1_chr19_-_14629235_14629346	0.0147302	SOX2.p2	
hg19_v1_chr4_-_75719686_75719881	0.0147302	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg19_v1_chr6_+_84562984_84563134	0.0147302	SOX2.p2	NM_001009994|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC130460|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC132968|RIPPLY2|134701|ripply2 homolog (zebrafish)	HQ258714|RIPPLY2|134701|ripply2 homolog (zebrafish)
hg19_v1_chr3_-_14988976_14989098	0.0146765	SOX2.p2	AK055924|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr15_-_64995346_64995374	0.0146206	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr21_-_34883620_34883747	0.0145735	SOX2.p2	M32082|GART|2618|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
hg19_v1_chr1_+_155178489_155178587	0.014543	SOX2.p2	NM_002455|MTX1|4580|metaxin 1	NM_198883|MTX1|4580|metaxin 1	AK313863|MTX1|4580|metaxin 1	BC001906|MTX1|4580|metaxin 1
hg19_v1_chr6_+_43211221_43211236	0.0145334	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg19_v1_chr14_+_69658215_69658290	0.014516	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr19_+_3880660_3880671	0.0145023	SOX2.p2	AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type
hg19_v1_chr4_+_76649826_76650003	0.0144991	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr13_-_46756291_46756294	0.0144982	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v1_chr20_+_17207669_17207674	0.0144901	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr3_-_148939784_148939831	0.014455	SOX2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg19_v1_chr6_-_33168438_33168438	0.0144286	SOX2.p2	AK301096|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr1_+_166958497_166958588	0.0144219	SOX2.p2	AK302253|MAEL|84944|maelstrom homolog (Drosophila)	AK131066|MAEL|84944|maelstrom homolog (Drosophila)	DQ076156|MAEL|84944|maelstrom homolog (Drosophila)	GU383113|MAEL|84944|maelstrom homolog (Drosophila)	AK027810|MAEL|84944|maelstrom homolog (Drosophila)	NM_032858|MAEL|84944|maelstrom homolog (Drosophila)	BC028595|MAEL|84944|maelstrom homolog (Drosophila)
hg19_v1_chr6_+_12717036_12717051	0.0144031	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr2_+_90077732_90077776	0.0143676	SOX2.p2	
hg19_v1_chrX_+_47077426_47077793	0.0143664	SOX2.p2	NM_033018|CDK16|5127|cyclin-dependent kinase 16	BC001048|CDK16|5127|cyclin-dependent kinase 16	BC015607|CDK16|5127|cyclin-dependent kinase 16
hg19_v1_chr11_+_64018996_64019118	0.0143588	SOX2.p2	BC146645|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC142681|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	BC032659|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)	AB385031|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)
hg19_v1_chr1_-_75199091_75199091	0.0143573	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg19_v1_chr8_+_24151579_24151636	0.0143439	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK225921|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg19_v1_chr17_-_26697293_26697303	0.0143429	SOX2.p2	BC005046|VTN|7448|vitronectin
hg19_v1_chr7_+_23636970_23637060	0.0143275	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg19_v1_chr8_+_1449531_1449568	0.01432	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg19_v1_chr3_-_182880463_182880666	0.0143167	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr12_-_102874158_102874273	0.0143064	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr2_-_109605668_109605827	0.0143	SOX2.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg19_v1_chr12_-_39836760_39837238	0.0142556	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg19_v1_chr19_+_51815095_51815101	0.0142544	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg19_v1_chr11_+_5509914_5509914	0.0142423	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg19_v1_chr22_+_46449674_46449774	0.0142413	SOX2.p2	
hg19_v1_chr4_-_174451356_174451383	0.0142408	SOX2.p2	NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2	AK122739|HAND2|9464|heart and neural crest derivatives expressed 2	FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2
hg19_v1_chr15_-_41166336_41166558	0.0142387	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg19_v1_chr8_-_18666295_18666404	0.0142287	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr2_-_48132656_48132931	0.0142165	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg19_v1_chr2_+_179059071_179059377	0.0141805	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg19_v1_chrX_+_123095555_123095591	0.0141564	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg19_v1_chr2_+_228356287_228356295	0.0141471	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr19_-_4182495_4182595	0.0141195	SOX2.p2	DQ896358|SIRT6|51548|sirtuin 6	EU176413|SIRT6|51548|sirtuin 6	CR457200|SIRT6|51548|sirtuin 6	BC005026|SIRT6|51548|sirtuin 6	BC004218|SIRT6|51548|sirtuin 6	AK299420|SIRT6|51548|sirtuin 6	BC028220|SIRT6|51548|sirtuin 6	AK293348|SIRT6|51548|sirtuin 6	AK315048|SIRT6|51548|sirtuin 6	AK301247|SIRT6|51548|sirtuin 6	AK074810|SIRT6|51548|sirtuin 6	AK225567|SIRT6|51548|sirtuin 6	AF233396|SIRT6|51548|sirtuin 6	NM_001193285|SIRT6|51548|sirtuin 6	NM_016539|SIRT6|51548|sirtuin 6
hg19_v1_chr19_+_34175433_34175433	0.0141012	SOX2.p2	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg19_v1_chr16_+_29086269_29086342	0.0140775	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg19_v1_chr17_-_4269814_4270002	0.0140673	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr12_-_99548867_99548867	0.0140524	SOX2.p2	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr13_+_98795710_98795727	0.0140362	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr1_-_120439117_120439146	0.0140215	SOX2.p2	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30
hg19_v1_chr5_-_36301999_36302010	0.0140041	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg19_v1_chr5_-_179044835_179044916	0.0139831	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr2_+_158958381_158958381	0.0139786	SOX2.p2	AK122743|UPP2|151531|uridine phosphorylase 2	NM_173355|UPP2|151531|uridine phosphorylase 2
hg19_v1_chr6_+_17282294_17282294	0.0139336	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr1_-_41627045_41627103	0.013912	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg19_v1_chr7_+_154002194_154002577	0.0139058	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg19_v1_chrX_-_18690187_18690222	0.0139034	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr11_-_129062092_129062092	0.0138941	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr4_+_95128994_95129234	0.0138551	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr8_+_7752198_7752211	0.0138447	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg19_v1_chr4_-_69434215_69434244	0.0138426	SOX2.p2	AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17	U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v1_chr10_-_118765087_118765138	0.0138061	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chr1_+_153606457_153606546	0.0136997	SOX2.p2	NM_001206612|CHTOP|26097|chromatin target of PRMT1	NM_001244664|CHTOP|26097|chromatin target of PRMT1	NM_015607|CHTOP|26097|chromatin target of PRMT1	AF261137|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr5_-_149466094_149466108	0.0136752	SOX2.p2	BC129939|CSF1R|1436|colony stimulating factor 1 receptor	BX648599|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr3_+_179280746_179280881	0.0136597	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg19_v1_chr20_-_1472004_1472067	0.0136576	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr17_-_37350051_37350135	0.0136025	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr3_+_97887543_97887543	0.0135995	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg19_v1_chr9_+_35041101_35041101	0.0135843	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr7_-_19812403_19812403	0.0135808	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg19_v1_chrX_-_38079980_38080271	0.0135606	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg19_v1_chr3_+_43328001_43328137	0.0135545	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg19_v1_chr9_-_136857285_136857608	0.0134584	SOX2.p2	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor	S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor
hg19_v1_chr19_+_2164119_2164157	0.0134255	SOX2.p2	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg19_v1_chr12_+_69979447_69979652	0.0134205	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr7_-_37488408_37488529	0.0133758	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr5_-_41071404_41071443	0.0133638	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg19_v1_chr1_+_27101217_27101360	0.0133557	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg19_v1_chr10_+_97471535_97471535	0.0133386	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr1_-_58716207_58716212	0.0133034	SOX2.p2	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)	NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr14_-_94423766_94423766	0.0132859	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg19_v1_chr7_+_22766765_22766881	0.0132851	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr2_+_70056920_70057023	0.0132826	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr7_-_141541220_141541284	0.0132206	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg19_v1_chr7_+_95115212_95115374	0.0132031	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr2_+_48844936_48845014	0.0131918	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg19_v1_chr18_-_51690988_51690996	0.0131894	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr3_-_165555252_165555283	0.0131651	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr13_+_98795410_98795433	0.0131523	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr16_+_75033238_75033282	0.0131209	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg19_v1_chr2_+_198669316_198669425	0.0131029	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg19_v1_chr11_-_57417247_57417416	0.0130997	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg19_v1_chr11_+_8060179_8060179	0.0130982	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg19_v1_chr12_-_18243052_18243113	0.0130857	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr12_-_120907535_120907613	0.0130672	SOX2.p2	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr2_-_158182154_158182415	0.0130641	SOX2.p2	HQ447390|ERMN|57471|ermin, ERM-like protein	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg19_v1_chr7_-_99698993_99699029	0.0130516	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr12_+_6603258_6603274	0.012996	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr1_+_162351519_162351652	0.0129542	SOX2.p2	AK125122|C1orf226|400793|chromosome 1 open reading frame 226	NM_001085375|C1orf226|400793|chromosome 1 open reading frame 226	BC127743|C1orf226|400793|chromosome 1 open reading frame 226	BC127744|C1orf226|400793|chromosome 1 open reading frame 226
hg19_v1_chr10_+_123922940_123923011	0.0129453	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr8_+_55528626_55528679	0.0129292	SOX2.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg19_v1_chr18_-_32924381_32924416	0.0129264	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg19_v1_chr6_-_10415217_10415334	0.0128923	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr12_+_6603291_6603297	0.0128754	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg19_v1_chr4_+_15683265_15683388	0.0128507	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr12_-_498428_498776	0.012836	SOX2.p2	AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A	AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A	AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A	BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A	BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A	NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A	BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A
hg19_v1_chr6_-_151712644_151712777	0.0128248	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg19_v1_chr3_-_57326709_57326709	0.0128181	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg19_v1_chr5_+_180326076_180326273	0.0127449	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg19_v1_chr7_+_39663140_39663193	0.0127434	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr13_+_52586516_52586554	0.0127308	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg19_v1_chr3_-_47823333_47823335	0.012708	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr1_-_186430216_186430238	0.0126831	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg19_v1_chr12_-_118406027_118406027	0.0126144	SOX2.p2	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg19_v1_chr12_+_100661203_100661548	0.0125954	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg19_v1_chr14_-_73925279_73925303	0.0125676	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr3_+_179280738_179280744	0.0124978	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A
hg19_v1_chr6_+_27925018_27925018	0.0124707	SOX2.p2	BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6
hg19_v1_chr15_+_69307033_69307070	0.0124627	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg19_v1_chr12_-_58146108_58146108	0.0124513	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr14_-_35344526_35344549	0.0124222	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr7_-_99699030_99699045	0.0124098	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr1_-_21503352_21503388	0.0123755	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr20_+_17207680_17207950	0.0123746	SOX2.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr2_+_241375235_241375295	0.0123716	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg19_v1_chr2_+_66662692_66662988	0.0123707	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg19_v1_chr9_-_72287097_72287311	0.0123652	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v1_chr1_+_92495484_92495636	0.012355	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg19_v1_chr22_-_38713384_38713444	0.0123389	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr9_-_107690526_107690532	0.0123383	SOX2.p2	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr14_-_74253876_74253962	0.0123289	SOX2.p2	NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43	BC009202|C14orf43|91748|chromosome 14 open reading frame 43
hg19_v1_chr4_-_40936640_40936716	0.0122992	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr6_-_26199439_26199520	0.0122919	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg19_v1_chr7_-_92462637_92462897	0.012284	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg19_v1_chr13_-_95131718_95131935	0.0122667	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg19_v1_chr17_-_46667596_46667630	0.0122535	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg19_v1_chr12_-_58146110_58146116	0.0122448	SOX2.p2	BC015669|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chrX_+_41583407_41583433	0.0122242	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg19_v1_chr7_-_8301681_8301752	0.0122191	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr2_+_32502956_32502969	0.0121773	SOX2.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr15_-_65670325_65670377	0.0121598	SOX2.p2	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3
hg19_v1_chr1_+_181002560_181002560	0.012154	SOX2.p2	NM_001194999|MR1|3140|major histocompatibility complex, class I-related	NM_001195000|MR1|3140|major histocompatibility complex, class I-related	NM_001195035|MR1|3140|major histocompatibility complex, class I-related	NM_001531|MR1|3140|major histocompatibility complex, class I-related
hg19_v1_chr8_+_120885899_120886110	0.0121442	SOX2.p2	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein
hg19_v1_chr12_-_11036815_11036873	0.0121317	SOX2.p2	BC128192|PRH1|5554|proline-rich protein HaeIII subfamily 1	BC133676|PRH1|5554|proline-rich protein HaeIII subfamily 1	K03203|PRH1|5554|proline-rich protein HaeIII subfamily 1	NM_006250|PRH1|5554|proline-rich protein HaeIII subfamily 1
hg19_v1_chr15_+_98503907_98503932	0.0121231	SOX2.p2	AK290221|ARRDC4|91947|arrestin domain containing 4	NM_183376|ARRDC4|91947|arrestin domain containing 4
hg19_v1_chrX_+_123095598_123095677	0.0121177	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg19_v1_chr5_-_149466126_149466166	0.0120999	SOX2.p2	AB208819|CSF1R|1436|colony stimulating factor 1 receptor
hg19_v1_chr7_+_129007942_129008030	0.0120755	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr16_+_31085751_31085778	0.0120667	SOX2.p2	BC035589|ZNF646|9726|zinc finger protein 646
hg19_v1_chr20_+_17206751_17206751	0.0120655	SOX2.p2	BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr2_+_128928040_128928054	0.0120649	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v1_chr14_-_69260630_69260630	0.0120601	SOX2.p2	NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr16_+_58283819_58283918	0.0120435	SOX2.p2	AK299066|CCDC113|29070|coiled-coil domain containing 113	NM_001142302|CCDC113|29070|coiled-coil domain containing 113	NM_014157|CCDC113|29070|coiled-coil domain containing 113	AK314300|CCDC113|29070|coiled-coil domain containing 113	AL136785|CCDC113|29070|coiled-coil domain containing 113	BC126445|CCDC113|29070|coiled-coil domain containing 113	BC126447|CCDC113|29070|coiled-coil domain containing 113	AF161550|CCDC113|29070|coiled-coil domain containing 113	AM392831|CCDC113|29070|coiled-coil domain containing 113	CR533506|CCDC113|29070|coiled-coil domain containing 113	HQ258203|CCDC113|29070|coiled-coil domain containing 113
hg19_v1_chr19_+_56166418_56166470	0.012029	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chr19_+_51760963_51760963	0.01202	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg19_v1_chr19_-_55767103_55767150	0.012001	SOX2.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr13_-_52733995_52733995	0.0119892	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr11_+_112046207_112046478	0.0119667	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg19_v1_chr17_-_46671322_46671412	0.0119257	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg19_v1_chr14_-_21994342_21994483	0.0119096	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr10_+_96698409_96698476	0.0119033	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v1_chr17_+_75283972_75283986	0.0118942	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg19_v1_chr17_-_38256548_38256897	0.0118936	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg19_v1_chr14_+_24641084_24641101	0.0118877	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg19_v1_chr17_+_39388714_39388751	0.011882	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr2_-_170430312_170430423	0.0118671	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg19_v1_chr19_-_16683188_16683205	0.011824	SOX2.p2	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg19_v1_chr1_-_43919547_43919659	0.011819	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg19_v1_chr17_-_27139391_27139503	0.0117959	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg19_v1_chr17_-_62658175_62658190	0.011782	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr5_-_36001126_36001129	0.0117746	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg19_v1_chr7_-_150721551_150721585	0.011773	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg19_v1_chr18_-_30352841_30352973	0.0117604	SOX2.p2	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)	AB037805|KLHL14|57565|kelch-like 14 (Drosophila)	NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)
hg19_v1_chr1_-_203155910_203155942	0.0117477	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr1_-_25291474_25291611	0.0117439	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg19_v1_chr5_+_86564044_86564089	0.011725	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr5_+_61602065_61602100	0.0116815	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr2_+_220492286_220492423	0.0116767	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr11_+_129940462_129940462	0.0116756	SOX2.p2	AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr1_+_90098624_90098642	0.0116606	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr17_+_68071386_68071475	0.0116499	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr3_-_55521330_55521334	0.0116313	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr1_-_202612580_202612580	0.0116254	SOX2.p2	AK094430|SYT2|127833|synaptotagmin II	NM_001136504|SYT2|127833|synaptotagmin II
hg19_v1_chr1_+_22778347_22778505	0.0116008	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr2_-_55277672_55277693	0.0115984	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg19_v1_chr2_-_225370687_225370770	0.011548	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg19_v1_chr17_+_52978022_52978290	0.0115239	SOX2.p2	NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1	AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1	AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1	AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1	AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1	AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1	AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1	BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1
hg19_v1_chr2_-_55277459_55277586	0.0114658	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg19_v1_chr12_+_64803741_64803815	0.0114616	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg19_v1_chr1_+_240255171_240255184	0.0114599	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg19_v1_chr5_-_16742336_16742338	0.0114579	SOX2.p2	AK316138|MYO10|4651|myosin X
hg19_v1_chr4_-_54424366_54424390	0.0114422	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr6_-_47277246_47277283	0.0114083	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr1_-_234743855_234743861	0.0113504	SOX2.p2	
hg19_v1_chr19_+_41770057_41770241	0.0113261	SOX2.p2	NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr20_-_31239558_31239782	0.0113259	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg19_v1_chr14_-_38064176_38064237	0.0113184	SOX2.p2	AM392863|FOXA1|3169|forkhead box A1	AM393239|FOXA1|3169|forkhead box A1	AM393310|FOXA1|3169|forkhead box A1	AM393369|FOXA1|3169|forkhead box A1	BC033890|FOXA1|3169|forkhead box A1
hg19_v1_chr6_-_53013581_53013626	0.0112773	SOX2.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg19_v1_chr16_+_55600583_55600667	0.0112491	SOX2.p2	BC006000|CAPNS2|84290|calpain, small subunit 2	NM_032330|CAPNS2|84290|calpain, small subunit 2	BC005397|CAPNS2|84290|calpain, small subunit 2	AY052551|CAPNS2|84290|calpain, small subunit 2	EU832656|CAPNS2|84290|calpain, small subunit 2
hg19_v1_chr9_-_130517552_130517582	0.0112321	SOX2.p2	AK291393|SH2D3C|10044|SH2 domain containing 3C	NM_001142534|SH2D3C|10044|SH2 domain containing 3C	AK056068|SH2D3C|10044|SH2 domain containing 3C	NM_001142533|SH2D3C|10044|SH2 domain containing 3C
hg19_v1_chr3_+_178254223_178254223	0.0112201	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr4_+_36283243_36283250	0.0112175	SOX2.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg19_v1_chr7_-_66460403_66460598	0.011187	SOX2.p2	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg19_v1_chr17_-_49124128_49124328	0.0111831	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr10_+_5936348_5936348	0.0111767	SOX2.p2	AF380349|FBXO18|84893|F-box protein, helicase, 18	NM_032807|FBXO18|84893|F-box protein, helicase, 18
hg19_v1_chr17_-_4046190_4046240	0.011158	SOX2.p2	
hg19_v1_chr12_-_120907411_120907497	0.0111049	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr9_-_134955056_134955242	0.0110538	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr9_+_116356407_116356556	0.0110499	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr4_+_54243909_54244009	0.0110476	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr17_+_27370155_27370243	0.0110198	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg19_v1_chr5_-_11903964_11904109	0.0110054	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg19_v1_chr13_+_98795468_98795504	0.0110015	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr7_+_56119439_56119461	0.0109995	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v1_chr19_+_51293671_51293671	0.0109766	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg19_v1_chr3_+_102153858_102153876	0.0109535	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg19_v1_chr3_+_58223415_58223646	0.0109486	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr17_-_39092714_39093086	0.0109375	SOX2.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr1_+_40840304_40840348	0.0109346	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg19_v1_chr3_+_196466806_196466845	0.0109339	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v1_chr16_+_77233348_77233375	0.0109335	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg19_v1_chr18_+_42260774_42260963	0.0109322	SOX2.p2	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg19_v1_chr8_+_85095501_85095585	0.0109187	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr3_-_47823419_47823595	0.0109134	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr1_+_36348795_36348812	0.0108918	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr17_-_39324423_39324423	0.0108906	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg19_v1_chr21_-_36231794_36231878	0.0108633	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr3_-_128294928_128294928	0.0108611	SOX2.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg19_v1_chrX_-_151619669_151619830	0.0108287	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg19_v1_chr5_+_68666861_68666915	0.0108251	SOX2.p2	NM_133340|RAD17|5884|RAD17 homolog (S. pombe)	NM_133341|RAD17|5884|RAD17 homolog (S. pombe)	AJ001642|RAD17|5884|RAD17 homolog (S. pombe)	AJ004977|RAD17|5884|RAD17 homolog (S. pombe)	AF098533|RAD17|5884|RAD17 homolog (S. pombe)	AF098534|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr19_-_46272496_46272496	0.0108239	SOX2.p2	NM_175875|SIX5|147912|SIX homeobox 5
hg19_v1_chr17_-_47492216_47492280	0.0108224	SOX2.p2	S85655|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg19_v1_chr7_+_144052432_144052574	0.0108189	SOX2.p2	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr3_-_119278402_119278480	0.0108126	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg19_v1_chr17_+_40925443_40925466	0.0107488	SOX2.p2	BC006282|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	NM_032353|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	AK312092|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)
hg19_v1_chr15_-_56388662_56388733	0.0107423	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg19_v1_chr4_+_25314392_25314503	0.0107257	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg19_v1_chr14_+_39649711_39649842	0.0107241	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg19_v1_chr4_+_187148624_187148712	0.0107129	SOX2.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg19_v1_chr2_-_242556883_242556915	0.0106797	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg19_v1_chr5_+_52284903_52285337	0.0106769	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr10_+_5005453_5005576	0.0106685	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg19_v1_chr10_-_5045967_5046093	0.0106601	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr6_-_123957941_123958237	0.0106142	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr8_-_67090690_67090845	0.0105859	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr12_-_95945226_95945262	0.0105546	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg19_v1_chrX_-_10535476_10535642	0.0105345	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr6_+_18387580_18387755	0.010521	SOX2.p2	AK096832|RNF144B|255488|ring finger protein 144B	NM_182757|RNF144B|255488|ring finger protein 144B	AB076367|RNF144B|255488|ring finger protein 144B	BC063311|RNF144B|255488|ring finger protein 144B	AL832329|RNF144B|255488|ring finger protein 144B
hg19_v1_chr6_-_32908583_32908846	0.0105015	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg19_v1_chr7_-_99277518_99277624	0.0104773	SOX2.p2	DQ890743|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ893913|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ896802|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	EU176488|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	L26985|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	X90579|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	J04813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC033862|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC025176|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK296205|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK313813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK223008|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK299002|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK309166|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC022298|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC026255|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX648856|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX537676|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_000777|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_001190484|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v1_chr7_+_26242007_26242107	0.0104561	SOX2.p2	
hg19_v1_chr5_-_95018659_95018713	0.0104099	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg19_v1_chrX_-_100129127_100129350	0.0104078	SOX2.p2	AJ438989|NOX1|27035|NADPH oxidase 1	DQ424904|NOX1|27035|NADPH oxidase 1	BC075014|NOX1|27035|NADPH oxidase 1	BC075015|NOX1|27035|NADPH oxidase 1	AF166326|NOX1|27035|NADPH oxidase 1	AF166327|NOX1|27035|NADPH oxidase 1	AF166328|NOX1|27035|NADPH oxidase 1	AK313678|NOX1|27035|NADPH oxidase 1	AK292201|NOX1|27035|NADPH oxidase 1	AF127763|NOX1|27035|NADPH oxidase 1	NM_007052|NOX1|27035|NADPH oxidase 1	NM_013955|NOX1|27035|NADPH oxidase 1
hg19_v1_chr4_-_83295037_83295123	0.0103915	SOX2.p2	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr5_+_176562084_176562141	0.0103903	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr1_-_200377488_200377589	0.0103686	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg19_v1_chr2_-_75937993_75938110	0.0103652	SOX2.p2	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2	BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2	AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2
hg19_v1_chr7_+_116312412_116312532	0.010359	SOX2.p2	EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg19_v1_chrX_+_133507299_133507455	0.0103565	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg19_v1_chr3_+_155588423_155588445	0.0103467	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chrX_-_47489703_47489703	0.0103455	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg19_v1_chr6_-_75965845_75965927	0.0103379	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr7_-_112727832_112727848	0.0103174	SOX2.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr10_+_103825123_103825162	0.0103032	SOX2.p2	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg19_v1_chr13_-_99852925_99853010	0.0102875	SOX2.p2	BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)
hg19_v1_chr1_+_241695433_241695742	0.0102756	SOX2.p2	NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v1_chr1_-_173962050_173962209	0.0102565	SOX2.p2	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg19_v1_chr4_+_57774090_57774236	0.0102381	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg19_v1_chr6_+_131958441_131958524	0.0102234	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v1_chr11_-_47510518_47510576	0.0102133	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg19_v1_chr14_-_105262015_105262075	0.0102094	SOX2.p2	BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr22_-_19512859_19512859	0.0102034	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5
hg19_v1_chr1_+_12806162_12806171	0.0101937	SOX2.p2	BC029894|C1orf158|93190|chromosome 1 open reading frame 158	NM_152290|C1orf158|93190|chromosome 1 open reading frame 158	AK026705|C1orf158|93190|chromosome 1 open reading frame 158	AK298760|C1orf158|93190|chromosome 1 open reading frame 158
hg19_v1_chr4_+_15683402_15683503	0.0101731	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr2_+_216986817_216986917	0.0101645	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr17_+_39555993_39556147	0.0101639	SOX2.p2	HQ448465|GAST|2520|gastrin
hg19_v1_chr9_-_80646150_80646218	0.0101571	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v1_chr20_-_3762060_3762112	0.0101494	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg19_v1_chr17_-_47492215_47492215	0.0101325	SOX2.p2	BC095460|PHB|5245|prohibitin
hg19_v1_chr8_-_82395401_82395475	0.010125	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg19_v1_chr17_-_67057046_67057135	0.0101134	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr8_-_105601124_105601226	0.0100981	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr11_+_66790189_66790189	0.0100351	SOX2.p2	AK315810|SYT12|91683|synaptotagmin XII	NM_001177880|SYT12|91683|synaptotagmin XII
hg19_v1_chr9_-_14779530_14779530	0.0100334	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg19_v1_chr4_-_185395616_185395746	0.0100266	SOX2.p2	X15949|IRF2|3660|interferon regulatory factor 2	DQ409328|IRF2|3660|interferon regulatory factor 2	AK312953|IRF2|3660|interferon regulatory factor 2	NM_002199|IRF2|3660|interferon regulatory factor 2
hg19_v1_chr12_+_65218351_65218416	0.0100199	SOX2.p2	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg19_v1_chr8_+_10530146_10530173	0.0100131	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74	HQ258143|C8orf74|203076|chromosome 8 open reading frame 74
hg19_v1_chr3_+_182970853_182971044	0.0100037	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr3_+_118864996_118864997	0.00999792	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg19_v1_chr6_+_41040687_41040712	0.00997531	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr17_-_38210611_38210678	0.0099636	SOX2.p2	EU392536|MED24|9862|mediator complex subunit 24	EU392541|MED24|9862|mediator complex subunit 24	D50920|MED24|9862|mediator complex subunit 24	AK022508|MED24|9862|mediator complex subunit 24	AK303502|MED24|9862|mediator complex subunit 24	AK303745|MED24|9862|mediator complex subunit 24	AK291040|MED24|9862|mediator complex subunit 24	AK293309|MED24|9862|mediator complex subunit 24	AK299864|MED24|9862|mediator complex subunit 24	AK300992|MED24|9862|mediator complex subunit 24
hg19_v1_chr14_-_57960432_57960575	0.00993709	SOX2.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr17_+_7323642_7323702	0.00993232	SOX2.p2	AK097400|SPEM1|374768|spermatid maturation 1	BC033882|SPEM1|374768|spermatid maturation 1	NM_199339|SPEM1|374768|spermatid maturation 1
hg19_v1_chr4_+_76649806_76649825	0.00992704	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg19_v1_chr19_+_41699140_41699186	0.00992068	SOX2.p2	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr5_+_38403633_38403649	0.00990617	SOX2.p2	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg19_v1_chr1_-_115053758_115053798	0.00989027	SOX2.p2	AF119043|TRIM33|51592|tripartite motif containing 33	AF220136|TRIM33|51592|tripartite motif containing 33	AF220137|TRIM33|51592|tripartite motif containing 33	NM_015906|TRIM33|51592|tripartite motif containing 33	NM_033020|TRIM33|51592|tripartite motif containing 33
hg19_v1_chr2_-_180427314_180427314	0.00988151	SOX2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg19_v1_chr12_+_119419299_119419395	0.00987731	SOX2.p2	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4
hg19_v1_chr1_+_155179005_155179047	0.0098637	SOX2.p2	BC035616|MTX1|4580|metaxin 1	AX775989|MTX1|4580|metaxin 1
hg19_v1_chr1_-_31538553_31538631	0.00983557	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr11_-_134281725_134281917	0.00983125	SOX2.p2	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v1_chr8_+_92261515_92261546	0.00981282	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg19_v1_chr15_-_50647604_50647604	0.00980826	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr18_+_31158540_31158578	0.00980547	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg19_v1_chr14_-_20774129_20774154	0.00979655	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr4_+_30722445_30722474	0.00979549	SOX2.p2	AB006756|PCDH7|5099|protocadherin 7
hg19_v1_chr5_+_70196489_70196677	0.00979546	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr1_+_174417211_174417249	0.00979453	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52	HQ995526|GPR52|9293|G protein-coupled receptor 52
hg19_v1_chr22_+_18632704_18632764	0.00979379	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr5_+_61602236_61602304	0.00978932	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr3_-_49893885_49894006	0.00977842	SOX2.p2	AB451320|TRAIP|10293|TRAF interacting protein	AB451449|TRAIP|10293|TRAF interacting protein	EF036504|TRAIP|10293|TRAF interacting protein	AK225873|TRAIP|10293|TRAF interacting protein	BC000310|TRAIP|10293|TRAF interacting protein	BC019283|TRAIP|10293|TRAF interacting protein	AK292172|TRAIP|10293|TRAF interacting protein	NM_005879|TRAIP|10293|TRAF interacting protein	U77845|TRAIP|10293|TRAF interacting protein	AK295780|TRAIP|10293|TRAF interacting protein
hg19_v1_chr1_-_203155827_203155835	0.00973328	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr2_+_173292344_173292614	0.00972692	SOX2.p2	X53586|ITGA6|3655|integrin, alpha 6	BC136455|ITGA6|3655|integrin, alpha 6	BC136456|ITGA6|3655|integrin, alpha 6	X59512|ITGA6|3655|integrin, alpha 6	AB208842|ITGA6|3655|integrin, alpha 6
hg19_v1_chr7_+_156803599_156803613	0.00968403	SOX2.p2	BC022831|LOC645249|645249|uncharacterized LOC645249	BC033117|LOC645249|645249|uncharacterized LOC645249
hg19_v1_chr1_-_21503304_21503344	0.00966995	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr1_+_109419748_109419826	0.00966013	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr3_+_147111221_147111244	0.00965296	SOX2.p2	
hg19_v1_chr14_+_24105572_24105585	0.00964234	SOX2.p2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg19_v1_chr6_+_26156558_26156639	0.00963728	SOX2.p2	NM_005321|HIST1H1E|3008|histone cluster 1, H1e	BC096168|HIST1H1E|3008|histone cluster 1, H1e	BC096169|HIST1H1E|3008|histone cluster 1, H1e	BC096170|HIST1H1E|3008|histone cluster 1, H1e	BC099632|HIST1H1E|3008|histone cluster 1, H1e	EF065554|HIST1H1E|3008|histone cluster 1, H1e	EF065555|HIST1H1E|3008|histone cluster 1, H1e
hg19_v1_chr1_+_205197031_205197136	0.00963163	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr8_+_126010719_126010747	0.0096216	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg19_v1_chr21_-_47705235_47705275	0.00960668	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg19_v1_chr7_+_148036528_148036603	0.0095919	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2
hg19_v1_chr22_-_45404785_45404873	0.0095791	SOX2.p2	AK299836|PHF21B|112885|PHD finger protein 21B	AK297317|PHF21B|112885|PHD finger protein 21B	AK091480|PHF21B|112885|PHD finger protein 21B	NM_001242450|PHF21B|112885|PHD finger protein 21B
hg19_v1_chr6_+_18155535_18155776	0.00955845	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg19_v1_chr11_-_59383167_59383172	0.00955823	SOX2.p2	BC051350|OSBP|5007|oxysterol binding protein	BC063121|OSBP|5007|oxysterol binding protein
hg19_v1_chr8_+_61429494_61429494	0.00955507	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr4_+_119948273_119948273	0.00955184	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg19_v1_chr12_+_54348683_54348713	0.00955049	SOX2.p2	NM_173860|HOXC12|3228|homeobox C12
hg19_v1_chr15_-_89764809_89765003	0.00954742	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg19_v1_chrX_+_11311532_11311553	0.00953714	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg19_v1_chr7_+_39663199_39663224	0.00953048	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr8_-_124553253_124553447	0.00950673	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32
hg19_v1_chr7_-_99699426_99699566	0.00949728	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr12_+_53491417_53491438	0.00949342	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr14_-_50100657_50100736	0.00949059	SOX2.p2	BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2	BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2	BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2	AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2
hg19_v1_chr14_-_105262078_105262085	0.00948952	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr10_+_127408225_127408399	0.00946147	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr8_+_61429551_61429578	0.00946037	SOX2.p2	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr22_-_18923654_18923809	0.00945054	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg19_v1_chr17_+_74261431_74261584	0.00943618	SOX2.p2	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr12_-_11062160_11062160	0.00943128	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg19_v1_chr4_+_88720701_88720741	0.00941255	SOX2.p2	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg19_v1_chr16_-_72206348_72206348	0.00937904	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr10_+_7745354_7745400	0.00937374	SOX2.p2	AK225277|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr17_+_73008744_73008810	0.00937069	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg19_v1_chr20_+_42965625_42965625	0.00935687	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg19_v1_chr6_-_32634287_32634593	0.00931862	SOX2.p2	L34097|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34098|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U66400|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AF000447|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AF291674|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16996|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M60028|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_001243961|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1
hg19_v1_chr5_-_158637060_158637060	0.00931591	SOX2.p2	AK308394|RNF145|153830|ring finger protein 145	NM_001199380|RNF145|153830|ring finger protein 145
hg19_v1_chr6_+_26156552_26156557	0.00930202	SOX2.p2	AK313681|HIST1H1E|3008|histone cluster 1, H1e
hg19_v1_chr11_-_115375065_115375296	0.00929018	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr6_+_152011630_152011756	0.0092527	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1	AB588629|ESR1|2099|estrogen receptor 1	AB588630|ESR1|2099|estrogen receptor 1
hg19_v1_chr1_-_102462789_102462792	0.00924126	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg19_v1_chr13_+_26828755_26828778	0.0092324	SOX2.p2	BC069634|CDK8|1024|cyclin-dependent kinase 8	BC104492|CDK8|1024|cyclin-dependent kinase 8	BC105950|CDK8|1024|cyclin-dependent kinase 8	BC107601|CDK8|1024|cyclin-dependent kinase 8	NM_001260|CDK8|1024|cyclin-dependent kinase 8	X85753|CDK8|1024|cyclin-dependent kinase 8	AY702976|CDK8|1024|cyclin-dependent kinase 8
hg19_v1_chrX_+_14547419_14547482	0.00922	SOX2.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg19_v1_chr3_-_39322763_39322763	0.00921901	SOX2.p2	NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg19_v1_chr5_-_87969135_87969156	0.00920896	SOX2.p2	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461	AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461	AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461	BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461
hg19_v1_chr17_-_4269610_4269812	0.00919102	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr11_-_65326129_65326252	0.00918974	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr1_-_203155867_203155909	0.00917812	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr7_+_37723378_37723386	0.00917601	SOX2.p2	
hg19_v1_chr14_-_20774089_20774125	0.00915458	SOX2.p2	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr11_+_33279167_33279404	0.009112	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr17_-_38210888_38210888	0.0091056	SOX2.p2	NM_001079518|MED24|9862|mediator complex subunit 24	NM_014815|MED24|9862|mediator complex subunit 24
hg19_v1_chr3_-_15540378_15540378	0.00909175	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v1_chr21_-_39870303_39870427	0.00909046	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg19_v1_chr7_-_128045995_128046039	0.00905702	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v1_chr22_+_40322609_40322640	0.00905352	SOX2.p2	AK303280|GRAP2|9402|GRB2-related adaptor protein 2	AK303657|GRAP2|9402|GRB2-related adaptor protein 2	AK312830|GRAP2|9402|GRB2-related adaptor protein 2	AK303470|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr17_-_47755340_47755524	0.00905295	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chr6_-_83775453_83775597	0.00904615	SOX2.p2	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg19_v1_chr17_+_40925473_40925496	0.0090247	SOX2.p2	AB014763|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)
hg19_v1_chr4_-_41884568_41884591	0.00901402	SOX2.p2	
hg19_v1_chrX_+_70315637_70316378	0.00901349	SOX2.p2	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg19_v1_chr12_-_24102563_24102641	0.00899415	SOX2.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chrX_-_72299224_72299350	0.00899085	SOX2.p2	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A
hg19_v1_chr17_+_61678218_61678247	0.00898763	SOX2.p2	AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr17_+_61627850_61627879	0.00898435	SOX2.p2	AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr1_+_28844647_28844759	0.00896615	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr15_+_91260575_91260654	0.00895796	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg19_v1_chr1_-_157567733_157567869	0.00895592	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg19_v1_chr17_+_72581056_72581056	0.00894112	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg19_v1_chr15_-_99791399_99791434	0.00893188	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr6_-_88411984_88411992	0.00892964	SOX2.p2	AK001204|AKIRIN2|55122|akirin 2	NM_018064|AKIRIN2|55122|akirin 2
hg19_v1_chr12_-_3862353_3862411	0.00890638	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg19_v1_chr16_+_67876381_67876584	0.00889553	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg19_v1_chr4_+_109088677_109088691	0.00883802	SOX2.p2	BC020624|LOC641518|641518|uncharacterized LOC641518
hg19_v1_chr3_+_25469833_25469901	0.00882586	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr17_+_66031814_66031866	0.00882388	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr17_-_26697358_26697372	0.00881263	SOX2.p2	NM_000638|VTN|7448|vitronectin
hg19_v1_chr7_-_99698916_99698992	0.00881189	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr15_+_33603162_33603176	0.00880722	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr19_-_47735858_47736022	0.00878974	SOX2.p2	AK298837|BBC3|27113|BCL2 binding component 3	AF354654|BBC3|27113|BCL2 binding component 3	AF354655|BBC3|27113|BCL2 binding component 3	AF354656|BBC3|27113|BCL2 binding component 3	NM_001127240|BBC3|27113|BCL2 binding component 3	NM_001127241|BBC3|27113|BCL2 binding component 3	NM_001127242|BBC3|27113|BCL2 binding component 3
hg19_v1_chr2_+_176969233_176969249	0.00878649	SOX2.p2	
hg19_v1_chr9_-_136933091_136933296	0.00878293	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg19_v1_chrX_-_11284094_11284123	0.00870659	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr3_+_182971213_182971343	0.00869609	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr3_+_111718006_111718269	0.00865897	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg19_v1_chr18_+_77253324_77253436	0.00857389	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg19_v1_chr19_+_38810461_38810515	0.0085731	SOX2.p2	AF117708|KCNK6|9424|potassium channel, subfamily K, member 6	NM_004823|KCNK6|9424|potassium channel, subfamily K, member 6	AK222545|KCNK6|9424|potassium channel, subfamily K, member 6	AK315653|KCNK6|9424|potassium channel, subfamily K, member 6	AF281302|KCNK6|9424|potassium channel, subfamily K, member 6
hg19_v1_chr10_+_101292689_101292737	0.00856216	SOX2.p2	NM_145285|NKX2-3|159296|NK2 homeobox 3	BC025788|NKX2-3|159296|NK2 homeobox 3	AK313485|NKX2-3|159296|NK2 homeobox 3	AK300856|NKX2-3|159296|NK2 homeobox 3
hg19_v1_chr6_+_80714321_80714383	0.00853793	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	AX775733|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg19_v1_chr16_-_81110803_81110871	0.00851291	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg19_v1_chrX_-_137821514_137821514	0.00849476	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr2_+_3705785_3705809	0.00849169	SOX2.p2	AK302299|ALLC|55821|allantoicase	NM_018436|ALLC|55821|allantoicase	BC029652|ALLC|55821|allantoicase
hg19_v1_chr3_+_171561138_171561158	0.00843579	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg19_v1_chr8_-_27115935_27115980	0.00841628	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chr2_-_103353300_103353367	0.00840563	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg19_v1_chr7_+_140774031_140774031	0.00840395	SOX2.p2	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like
hg19_v1_chr17_-_655468_655503	0.00838171	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr10_+_121578768_121578785	0.00837569	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr4_-_54424402_54424435	0.00837233	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr6_+_42531951_42532057	0.00835724	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr1_-_21113758_21113796	0.00834627	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr11_-_35441099_35441107	0.00834169	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr6_+_30297087_30297094	0.00831999	SOX2.p2	NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough	BT007370|TRIM39|56658|tripartite motif containing 39
hg19_v1_chr12_-_114846191_114846246	0.00830894	SOX2.p2	AB051068|TBX5|6910|T-box 5	AF221714|TBX5|6910|T-box 5	NM_000192|TBX5|6910|T-box 5	NM_080717|TBX5|6910|T-box 5	Y09445|TBX5|6910|T-box 5
hg19_v1_chr9_-_74525846_74526005	0.00830738	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg19_v1_chr18_+_63417487_63417487	0.00830653	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg19_v1_chr5_-_96478438_96478446	0.008298	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr12_+_106751435_106751506	0.00829665	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v1_chr22_+_18632841_18632964	0.00829535	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr8_+_118147336_118147336	0.00829008	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg19_v1_chr11_-_128712340_128712416	0.00826209	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v1_chr11_+_68367824_68367929	0.00823457	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg19_v1_chr18_-_44497307_44497520	0.00821873	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr3_+_128532267_128532404	0.00819231	SOX2.p2	
hg19_v1_chr1_-_200377262_200377276	0.00815311	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg19_v1_chr22_+_40297085_40297163	0.00814823	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr3_-_10547267_10547271	0.00814533	SOX2.p2	AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr3_+_52828783_52828815	0.00814059	SOX2.p2	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3
hg19_v1_chr22_+_38597938_38598017	0.00813648	SOX2.p2	NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr1_-_40042072_40042150	0.00813526	SOX2.p2	BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v1_chr19_-_56988698_56988769	0.00813333	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr10_-_99161013_99161138	0.00812747	SOX2.p2	AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)
hg19_v1_chr12_-_57873364_57873425	0.00811735	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr1_-_115238091_115238238	0.00808399	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg19_v1_chr5_+_148961035_148961134	0.0080816	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v1_chr6_-_41040160_41040354	0.00807105	SOX2.p2	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg19_v1_chr22_+_21821458_21821458	0.00807015	SOX2.p2	NM_001207052|TMEM191C|645426|transmembrane protein 191C
hg19_v1_chr12_+_22778085_22778210	0.00806006	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr20_+_37209837_37209843	0.00805798	SOX2.p2	BC029594|ADIG|149685|adipogenin	NM_001018082|ADIG|149685|adipogenin	BC119704|ADIG|149685|adipogenin	BC119705|ADIG|149685|adipogenin
hg19_v1_chr9_-_86322593_86322607	0.00805635	SOX2.p2	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg19_v1_chr11_-_118661826_118661847	0.00803226	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr1_-_153940187_153940187	0.00800611	SOX2.p2	BC014303|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1	NM_014437|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1
hg19_v1_chr19_-_39303739_39303739	0.0079988	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr5_-_141338626_141338626	0.00799697	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg19_v1_chr19_+_10362886_10362910	0.00799263	SOX2.p2	BC009858|MRPL4|51073|mitochondrial ribosomal protein L4
hg19_v1_chr12_-_49449106_49449106	0.00799134	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg19_v1_chr15_-_59225800_59225863	0.00798121	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr1_+_47901688_47901688	0.00797871	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg19_v1_chr12_-_70093064_70093195	0.0079739	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg19_v1_chr1_-_31538486_31538549	0.00797262	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr9_-_134955243_134955257	0.00796501	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr16_+_2083264_2083296	0.00796025	SOX2.p2	NM_001252073|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252075|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252076|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg19_v1_chr6_+_31783280_31783306	0.00795903	SOX2.p2	NM_005345|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chr1_+_154193294_154193454	0.00795561	SOX2.p2	NM_014847|UBAP2L|9898|ubiquitin associated protein 2-like	AK302662|UBAP2L|9898|ubiquitin associated protein 2-like	AK303533|UBAP2L|9898|ubiquitin associated protein 2-like	AJ243668|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr17_+_7960201_7960203	0.00794695	SOX2.p2	
hg19_v1_chr19_+_13080431_13080474	0.00794617	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5	HQ258091|DAND5|199699|DAN domain family, member 5
hg19_v1_chr2_-_70314065_70314161	0.00793046	SOX2.p2	BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)
hg19_v1_chr3_+_115342150_115342150	0.00792323	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43
hg19_v1_chr17_+_13972841_13972922	0.00792023	SOX2.p2	BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg19_v1_chr17_+_58499854_58499905	0.00791678	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg19_v1_chr16_-_68482373_68482590	0.00790229	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v1_chr20_-_42355566_42355641	0.00789757	SOX2.p2	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg19_v1_chr12_-_46663207_46663207	0.00789671	SOX2.p2	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1	NM_030674|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr1_-_150241409_150241608	0.00786741	SOX2.p2	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr2_-_55277592_55277614	0.00785273	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg19_v1_chr9_+_123850573_123850604	0.00785035	SOX2.p2	NM_007018|CNTRL|11064|centriolin	BC137284|CNTRL|11064|centriolin	BC137286|CNTRL|11064|centriolin	AF513978|CNTRL|11064|centriolin
hg19_v1_chr12_+_122459791_122459995	0.00785006	SOX2.p2	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A	NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A	NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A	AK316486|BCL7A|605|B-cell CLL/lymphoma 7A	BC113627|BCL7A|605|B-cell CLL/lymphoma 7A	BC094723|BCL7A|605|B-cell CLL/lymphoma 7A	HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A
hg19_v1_chr19_+_12780516_12780603	0.00784988	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg19_v1_chr2_-_55277698_55277733	0.00784885	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr6_-_32339648_32339679	0.00784783	SOX2.p2	AK302176|C6orf10|10665|chromosome 6 open reading frame 10	BC034774|C6orf10|10665|chromosome 6 open reading frame 10	NM_006781|C6orf10|10665|chromosome 6 open reading frame 10	AK310230|C6orf10|10665|chromosome 6 open reading frame 10	AK225742|C6orf10|10665|chromosome 6 open reading frame 10
hg19_v1_chr11_-_35440514_35440909	0.00784099	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr12_-_52946734_52946930	0.00781819	SOX2.p2	AJ308601|KRT71|112802|keratin 71	EU832765|KRT71|112802|keratin 71	GQ129308|KRT71|112802|keratin 71	AJ308600|KRT71|112802|keratin 71	BC103917|KRT71|112802|keratin 71	BC103918|KRT71|112802|keratin 71	AJ308599|KRT71|112802|keratin 71	AK122795|KRT71|112802|keratin 71	NM_033448|KRT71|112802|keratin 71
hg19_v1_chr2_-_106810735_106810755	0.00781172	SOX2.p2	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr7_-_115670828_115670876	0.00780818	SOX2.p2	CR933605|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg19_v1_chr12_+_53491448_53491506	0.00780463	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr17_-_3030844_3030958	0.00779736	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg19_v1_chr19_-_14629160_14629226	0.00778905	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr6_-_105627857_105627857	0.00776117	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr15_+_80390757_80390757	0.0077558	SOX2.p2	NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr2_-_151344145_151344183	0.00773327	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg19_v1_chr17_-_655375_655465	0.00768574	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr12_-_122985396_122985458	0.00767528	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg19_v1_chr8_-_30515665_30515808	0.00764357	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg19_v1_chr2_+_3627725_3627765	0.0076338	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg19_v1_chr1_-_224622000_224622000	0.00763315	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg19_v1_chr2_-_74007101_74007285	0.0076292	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg19_v1_chr1_-_52521046_52521046	0.00762904	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr3_+_182971592_182971620	0.00758826	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr15_-_42749710_42749764	0.00758229	SOX2.p2	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)	NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg19_v1_chr8_+_39771327_39771441	0.00755582	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1	JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg19_v1_chrX_-_138724851_138724999	0.00753845	SOX2.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg19_v1_chr17_+_59477473_59477519	0.00752989	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr6_+_21593963_21594781	0.00751771	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr1_-_154193073_154193272	0.00751192	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg19_v1_chr4_-_168155691_168155717	0.00748859	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v1_chr1_-_53018630_53018704	0.00745748	SOX2.p2	BC131734|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC048301|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg19_v1_chr6_+_32940860_32940860	0.0074491	SOX2.p2	BX647233|BRD2|6046|bromodomain containing 2	NM_001199456|BRD2|6046|bromodomain containing 2
hg19_v1_chr13_+_42712177_42712244	0.00742768	SOX2.p2	AK302727|DGKH|160851|diacylglycerol kinase, eta	NM_001204505|DGKH|160851|diacylglycerol kinase, eta	NM_001204506|DGKH|160851|diacylglycerol kinase, eta	AK122909|DGKH|160851|diacylglycerol kinase, eta	AK302631|DGKH|160851|diacylglycerol kinase, eta	BC043292|DGKH|160851|diacylglycerol kinase, eta	BC044822|DGKH|160851|diacylglycerol kinase, eta
hg19_v1_chr2_-_217724781_217724781	0.00742274	SOX2.p2	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)	NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)
hg19_v1_chr3_+_184038445_184038482	0.00741813	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr10_+_7745325_7745339	0.00741119	SOX2.p2	AK225329|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	AK297334|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	X07173|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr3_+_111578026_111578116	0.00741101	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg19_v1_chr16_-_23521803_23521818	0.00740444	SOX2.p2	AK024619|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	NM_015044|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr12_-_49504337_49504513	0.0074007	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg19_v1_chr8_+_136470108_136470294	0.00739254	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr17_-_31204071_31204176	0.00738206	SOX2.p2	AK127942|MYO1D|4642|myosin ID
hg19_v1_chr7_-_33080517_33080521	0.00736138	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg19_v1_chr2_-_64371444_64371604	0.00736082	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg19_v1_chr21_+_30671736_30671736	0.00735663	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v1_chr3_+_184033936_184033978	0.00731156	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr6_-_139613114_139613207	0.00730895	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg19_v1_chr17_-_1248346_1248366	0.00728532	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr8_-_133492751_133492824	0.007266	SOX2.p2	BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v1_chr22_+_40297183_40297312	0.00725314	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr15_-_65360175_65360288	0.00725232	SOX2.p2	AK314914|RASL12|51285|RAS-like, family 12	AK296261|RASL12|51285|RAS-like, family 12	AF233588|RASL12|51285|RAS-like, family 12
hg19_v1_chr1_-_115259381_115259388	0.00723836	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr16_-_29937523_29937530	0.0072251	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr20_-_23433478_23433481	0.00721203	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg19_v1_chrX_-_43832920_43832920	0.00721021	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr15_-_31283617_31283918	0.00719158	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg19_v1_chr19_-_11450254_11450347	0.00717294	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg19_v1_chr6_-_159466019_159466183	0.00716923	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg19_v1_chr17_-_39471944_39471946	0.00716377	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg19_v1_chr6_+_30688085_30688141	0.00715015	SOX2.p2	AK303227|TUBB|203068|tubulin, beta class I	BC020946|TUBB|203068|tubulin, beta class I	AK297638|TUBB|203068|tubulin, beta class I	AK098772|TUBB|203068|tubulin, beta class I	AK316265|TUBB|203068|tubulin, beta class I	BC103746|TUBB|203068|tubulin, beta class I	AF070600|TUBB|203068|tubulin, beta class I	AF141349|TUBB|203068|tubulin, beta class I	BC070326|TUBB|203068|tubulin, beta class I
hg19_v1_chr12_-_11244828_11244911	0.00713598	SOX2.p2	HQ258369|TAS2R31|259290|taste receptor, type 2, member 31	BC117423|TAS2R43|259289|taste receptor, type 2, member 43	NM_176884|TAS2R43|259289|taste receptor, type 2, member 43
hg19_v1_chr6_-_31510251_31510251	0.00713453	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr4_-_168155576_168155646	0.00713295	SOX2.p2	AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v1_chr15_+_98503938_98503964	0.00710829	SOX2.p2	BC028704|ARRDC4|91947|arrestin domain containing 4	BC070100|ARRDC4|91947|arrestin domain containing 4
hg19_v1_chr2_+_204571197_204571363	0.00710776	SOX2.p2	NM_001243077|CD28|940|CD28 molecule	NM_001243078|CD28|940|CD28 molecule	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg19_v1_chr11_-_77348758_77348871	0.00710001	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg19_v1_chr17_-_30669133_30669281	0.00708978	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr6_-_31745048_31745107	0.00706756	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg19_v1_chrY_-_19992072_19992099	0.00706479	SOX2.p2	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr4_-_113558120_113558150	0.00705387	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr1_-_154155594_154155633	0.00703813	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg19_v1_chr10_-_45455136_45455158	0.00700793	SOX2.p2	AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)
hg19_v1_chr10_-_98325100_98325183	0.00700249	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr7_+_123295860_123296015	0.00697731	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg19_v1_chr16_+_67906924_67906967	0.00696661	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr12_+_5603297_5603380	0.00694296	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg19_v1_chr11_+_3829765_3829783	0.00693506	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2
hg19_v1_chr5_-_150284503_150284544	0.006919	SOX2.p2	AK096465|ZNF300|91975|zinc finger protein 300	NM_001172831|ZNF300|91975|zinc finger protein 300	NM_001172832|ZNF300|91975|zinc finger protein 300	NM_052860|ZNF300|91975|zinc finger protein 300
hg19_v1_chr3_+_127347966_127348098	0.006899	SOX2.p2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2
hg19_v1_chr11_+_71498497_71498717	0.00687961	SOX2.p2	NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1	NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1	NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1	AK130709|FAM86C1|55199|family with sequence similarity 86, member C1	AK311675|FAM86C1|55199|family with sequence similarity 86, member C1	AK311518|FAM86C1|55199|family with sequence similarity 86, member C1	BC032519|FAM86C1|55199|family with sequence similarity 86, member C1	AK001523|FAM86C1|55199|family with sequence similarity 86, member C1	AK293221|FAM86C1|55199|family with sequence similarity 86, member C1	AK311428|FAM86C1|55199|family with sequence similarity 86, member C1	AK315454|FAM86C1|55199|family with sequence similarity 86, member C1
hg19_v1_chrX_+_119384685_119384696	0.00687362	SOX2.p2	
hg19_v1_chr1_-_249120063_249120153	0.00687084	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg19_v1_chr16_-_30934437_30934589	0.00685207	SOX2.p2	BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)
hg19_v1_chr5_-_1344941_1345104	0.00683738	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg19_v1_chr2_-_80530943_80530984	0.00682265	SOX2.p2	AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg19_v1_chr22_-_17640076_17640152	0.00680959	SOX2.p2	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr16_+_67876221_67876300	0.00679111	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg19_v1_chr2_+_191273012_191273115	0.00675637	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr1_+_50569581_50569581	0.00674473	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr16_-_69788798_69788848	0.00674433	SOX2.p2	AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v1_chr22_-_17640153_17640167	0.00673812	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr22_+_21271940_21272066	0.00673269	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr6_-_33756905_33756916	0.0067241	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg19_v1_chr19_+_39899749_39899837	0.00672097	SOX2.p2	
hg19_v1_chr3_+_10068123_10068129	0.00670834	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr12_-_26277807_26278036	0.00669791	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr2_-_172750724_172750843	0.00669099	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr1_-_27226928_27226935	0.00668633	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr2_-_77749335_77749501	0.00668501	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg19_v1_chr6_-_30654978_30654992	0.00668393	SOX2.p2	AB073600|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	BX647622|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr18_+_20715726_20715726	0.00668291	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr1_-_176176283_176176354	0.0066754	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr15_-_34635306_34635364	0.00666955	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg19_v1_chr3_+_173116243_173116243	0.0066472	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr19_+_41699076_41699132	0.00663446	SOX2.p2	AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr12_+_105380113_105380129	0.00662502	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg19_v1_chr14_+_63671101_63671261	0.00659837	SOX2.p2	NM_020663|RHOJ|57381|ras homolog gene family, member J	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg19_v1_chr1_+_154193757_154193813	0.00658396	SOX2.p2	AK124294|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr1_-_43424324_43424520	0.00658262	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr14_-_31926597_31926753	0.00657902	SOX2.p2	BC010618|C14orf126|112487|chromosome 14 open reading frame 126	AK055367|C14orf126|112487|chromosome 14 open reading frame 126	NM_080664|C14orf126|112487|chromosome 14 open reading frame 126
hg19_v1_chrX_-_110513750_110513777	0.0065732	SOX2.p2	AJ000388|CAPN6|827|calpain 6	NM_014289|CAPN6|827|calpain 6
hg19_v1_chr1_-_228604305_228604457	0.00656449	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr4_+_6717841_6717896	0.00656196	SOX2.p2	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr6_+_43149925_43149950	0.00655814	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg19_v1_chr17_+_38474544_38474551	0.00655506	SOX2.p2	AK130192|RARA|5914|retinoic acid receptor, alpha
hg19_v1_chr11_+_125034604_125034649	0.00654313	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg19_v1_chr6_-_31774725_31774765	0.00651176	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr1_-_200378832_200378986	0.00651106	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr10_-_88730928_88731067	0.0064987	SOX2.p2	AK128041|LOC100133190|100133190|uncharacterized LOC100133190
hg19_v1_chr14_+_71996041_71996041	0.00648032	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr6_+_43597278_43597278	0.00647754	SOX2.p2	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein
hg19_v1_chr17_-_34344933_34345004	0.00645311	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg19_v1_chr1_+_182808436_182808478	0.00644947	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr20_-_4804067_4804321	0.0064427	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr6_-_84140854_84140954	0.00642835	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr15_-_65360297_65360387	0.00642507	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg19_v1_chr3_+_193853930_193853936	0.00640953	SOX2.p2	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg19_v1_chr17_+_43971655_43971747	0.00640751	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr6_+_32939371_32939371	0.00637209	SOX2.p2	NM_001199455|BRD2|6046|bromodomain containing 2
hg19_v1_chr7_+_16566504_16566504	0.00636862	SOX2.p2	NM_001195280|LRRC72|100506049|leucine rich repeat containing 72
hg19_v1_chr10_+_12110968_12111047	0.00636514	SOX2.p2	BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1
hg19_v1_chr18_-_64271215_64271408	0.00635958	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chrX_+_153237990_153237990	0.00634678	SOX2.p2	NM_003492|TMEM187|8269|transmembrane protein 187
hg19_v1_chr8_+_126010748_126010804	0.00633979	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg19_v1_chr19_-_51893791_51893860	0.00631705	SOX2.p2	BC085012|LOC147646|147646|uncharacterized LOC147646	BC043532|LOC147646|147646|uncharacterized LOC147646	NM_001193623|LOC147646|147646|uncharacterized LOC147646
hg19_v1_chr10_+_7745284_7745320	0.00629369	SOX2.p2	AK291379|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr7_+_2598712_2598782	0.00628213	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg19_v1_chr7_+_69064580_69064596	0.00627831	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg19_v1_chr14_-_99737554_99737680	0.00627718	SOX2.p2	AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v1_chr6_+_34204928_34204935	0.00624547	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr1_-_173638970_173639002	0.00624518	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg19_v1_chr11_+_33037727_33037727	0.00623808	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg19_v1_chr4_+_76995862_76995876	0.00622311	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg19_v1_chr8_+_98656329_98656426	0.00621716	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg19_v1_chr2_-_136594749_136594749	0.0062005	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr6_-_16761600_16761794	0.00619927	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg19_v1_chr17_+_61678277_61678442	0.00618866	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr11_-_118972529_118972588	0.00614968	SOX2.p2	AK225994|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC000325|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC047771|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK301973|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK312783|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
hg19_v1_chr11_+_64949413_64949466	0.00614363	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg19_v1_chr15_-_26108236_26108471	0.00613959	SOX2.p2	EU831492|ATP10A|57194|ATPase, class V, type 10A	EU831579|ATP10A|57194|ATPase, class V, type 10A	NM_024490|ATP10A|57194|ATPase, class V, type 10A	BC052251|ATP10A|57194|ATPase, class V, type 10A
hg19_v1_chr10_+_18549583_18549697	0.00612787	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr7_-_27159213_27159213	0.00612752	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg19_v1_chr2_-_55277620_55277634	0.00612284	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg19_v1_chr2_+_113299491_113299612	0.00611275	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg19_v1_chr4_+_90816002_90816122	0.00611161	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1	HQ258009|MMRN1|22915|multimerin 1
hg19_v1_chr11_-_62368700_62368766	0.00610494	SOX2.p2	AK301569|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr2_+_37571752_37571874	0.0060897	SOX2.p2	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase
hg19_v1_chr11_-_118972784_118972851	0.00608586	SOX2.p2	NM_001382|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK095718|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
hg19_v1_chr18_+_32398225_32398411	0.00608043	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr5_+_179921371_179921416	0.00607787	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr22_-_18257160_18257189	0.00607218	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg19_v1_chr13_+_31774122_31774298	0.00601578	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr15_-_44955832_44955856	0.00601153	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg19_v1_chr16_+_67876211_67876219	0.00601065	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg19_v1_chr1_-_203155745_203155810	0.00600127	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr14_-_55650348_55650465	0.00596583	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg19_v1_chr7_-_107880492_107880613	0.00595554	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr15_-_101459410_101459538	0.0059538	SOX2.p2	
hg19_v1_chr1_-_203155813_203155825	0.00595337	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr19_+_55385548_55385745	0.00595029	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg19_v1_chr6_-_47277511_47277639	0.00593508	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr19_-_47922339_47922382	0.00591655	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg19_v1_chr16_+_2563914_2563976	0.0059147	SOX2.p2	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr16_-_11680756_11680823	0.00590163	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr8_+_146277830_146277971	0.00589642	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr11_-_66313474_66313501	0.00588706	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg19_v1_chr22_-_18257221_18257225	0.00588667	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg19_v1_chr8_+_29952971_29953028	0.00587929	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr4_-_120243257_120243315	0.00587809	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg19_v1_chr6_-_31981049_31981049	0.00584907	SOX2.p2	NM_032470|TNXB|7148|tenascin XB	U24488|TNXB|7148|tenascin XB
hg19_v1_chrX_-_41782230_41782421	0.00584121	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v1_chr14_+_96846021_96846021	0.00583781	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr5_-_16738346_16738495	0.00582454	SOX2.p2	AK295736|MYO10|4651|myosin X
hg19_v1_chr14_-_58894217_58894231	0.00582017	SOX2.p2	BC054875|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC020213|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_012460|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr5_-_83680191_83680301	0.00580391	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr7_-_94953827_94953883	0.00578009	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg19_v1_chr6_+_10555948_10555948	0.00575169	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v1_chrX_+_119384490_119384683	0.00574215	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg19_v1_chr2_-_55199894_55199922	0.00570605	SOX2.p2	
hg19_v1_chr21_+_33784751_33784751	0.00570337	SOX2.p2	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63
hg19_v1_chr8_-_133492556_133492690	0.00570169	SOX2.p2	AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v1_chr2_+_238536183_238536535	0.00569618	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg19_v1_chr18_-_77711652_77711653	0.00568346	SOX2.p2	AK301881|PQLC1|80148|PQ loop repeat containing 1	NM_001146343|PQLC1|80148|PQ loop repeat containing 1	NM_001146345|PQLC1|80148|PQ loop repeat containing 1	NM_025078|PQLC1|80148|PQ loop repeat containing 1
hg19_v1_chr15_-_65477645_65477727	0.00567861	SOX2.p2	AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr22_-_18257194_18257220	0.00564182	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg19_v1_chr19_-_48547180_48547310	0.00563396	SOX2.p2	HQ258076|CABP5|56344|calcium binding protein 5	BC126133|CABP5|56344|calcium binding protein 5	BC126135|CABP5|56344|calcium binding protein 5	AF169159|CABP5|56344|calcium binding protein 5	NM_019855|CABP5|56344|calcium binding protein 5
hg19_v1_chr12_+_6898705_6898790	0.00562813	SOX2.p2	AK300052|CD4|920|CD4 molecule	AK308344|CD4|920|CD4 molecule	BC025782|CD4|920|CD4 molecule
hg19_v1_chr15_-_43662107_43662259	0.00562715	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg19_v1_chr5_+_34839268_34839327	0.00562008	SOX2.p2	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like	NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like
hg19_v1_chr19_-_7990974_7991058	0.00560914	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg19_v1_chr16_-_75272524_75272557	0.00559241	SOX2.p2	AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr1_-_38019828_38019954	0.00557702	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg19_v1_chr16_-_21663908_21663933	0.00557414	SOX2.p2	DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6	DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6	EU176227|IGSF6|10261|immunoglobulin superfamily, member 6	EU176324|IGSF6|10261|immunoglobulin superfamily, member 6	AK313860|IGSF6|10261|immunoglobulin superfamily, member 6	AK223286|IGSF6|10261|immunoglobulin superfamily, member 6	AK290910|IGSF6|10261|immunoglobulin superfamily, member 6	AK293703|IGSF6|10261|immunoglobulin superfamily, member 6	BC017844|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chrX_-_2847315_2847348	0.00557396	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg19_v1_chr16_-_75299713_75299938	0.005562	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr2_+_211342405_211342432	0.005561	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr5_-_49737216_49737271	0.00555073	SOX2.p2	NM_198449|EMB|133418|embigin
hg19_v1_chr17_+_26794838_26794968	0.00554132	SOX2.p2	
hg19_v1_chr19_-_52674895_52674895	0.0055408	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg19_v1_chr8_+_117963189_117963217	0.00553909	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg19_v1_chr3_-_126373957_126373996	0.00551403	SOX2.p2	NM_001173513|TXNRD3|114112|thioredoxin reductase 3	NM_052883|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr16_-_188258_188651	0.00550163	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg19_v1_chr1_-_176176113_176176217	0.00550059	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr10_+_95517565_95517727	0.00549741	SOX2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg19_v1_chr12_+_45609867_45609875	0.00549524	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg19_v1_chr19_-_18548788_18548965	0.00549143	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr14_-_45603668_45603745	0.0054607	SOX2.p2	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chr1_-_78444772_78444778	0.00545594	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr16_-_12010518_12010518	0.00542669	SOX2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chr6_+_148663953_148664027	0.00540171	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr5_-_150284293_150284373	0.00539775	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg19_v1_chr4_+_3294711_3294809	0.0053758	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr4_-_147442868_147443124	0.00536692	SOX2.p2	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
hg19_v1_chr10_+_104263726_104263913	0.00536078	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg19_v1_chr18_+_28898051_28898263	0.00535026	SOX2.p2	AF097935|DSG1|1828|desmoglein 1	NM_001942|DSG1|1828|desmoglein 1	X56654|DSG1|1828|desmoglein 1
hg19_v1_chr10_+_18429605_18429809	0.00534869	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr3_-_52804871_52804995	0.00533238	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg19_v1_chr4_-_83294806_83294938	0.00532305	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr12_+_117348710_117348862	0.00530764	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg19_v1_chr14_-_31495524_31495617	0.00530713	SOX2.p2	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg19_v1_chr3_+_132318980_132318980	0.0052507	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg19_v1_chr5_+_34656367_34656459	0.0052493	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_-_100643770_100643800	0.00524568	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg19_v1_chr1_+_40859016_40859016	0.00524286	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg19_v1_chr17_-_73258441_73258443	0.00524239	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg19_v1_chr8_+_29952921_29952965	0.00523595	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr1_-_21377387_21377394	0.00522004	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr14_-_35344490_35344525	0.00519579	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr20_+_58571416_58571428	0.00517829	SOX2.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg19_v1_chr19_-_6459735_6459875	0.0051729	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr1_-_114695061_114695061	0.00516381	SOX2.p2	AK056448|SYT6|148281|synaptotagmin VI	NM_205848|SYT6|148281|synaptotagmin VI
hg19_v1_chr12_+_72057676_72057936	0.00515817	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr19_+_13229101_13229150	0.00515365	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg19_v1_chr1_+_62660473_62660560	0.00514525	SOX2.p2	NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1	NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1	BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1	BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1	AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1	AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1	AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1	BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1
hg19_v1_chr9_-_35072643_35072738	0.00514212	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg19_v1_chr12_+_50869531_50869643	0.00513961	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr1_+_161129288_161129402	0.00513294	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr8_+_23101149_23101168	0.00512423	SOX2.p2	AK097202|CHMP7|91782|charged multivesicular body protein 7	NM_152272|CHMP7|91782|charged multivesicular body protein 7	BC042050|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr11_-_3013577_3013622	0.00510532	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr13_-_52733669_52733784	0.00508782	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr19_+_44100543_44100543	0.00508333	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg19_v1_chr11_+_67007488_67007678	0.00508104	SOX2.p2	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A	AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A
hg19_v1_chr6_-_31782786_31782834	0.00506679	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg19_v1_chr22_-_17640168_17640190	0.00506007	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr5_+_121647385_121647440	0.00505806	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr1_+_118472364_118472393	0.00505035	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg19_v1_chr2_+_183580960_183581189	0.00502185	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr17_-_4046244_4046261	0.00501666	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg19_v1_chr11_-_3013479_3013521	0.00500205	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr2_+_26257384_26257550	0.00500125	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg19_v1_chr3_+_14989076_14989235	0.00499834	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg19_v1_chr3_-_11623829_11623837	0.00499178	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr11_-_3803310_3803346	0.00497851	SOX2.p2	EF071958|NUP98|4928|nucleoporin 98kDa
hg19_v1_chr14_-_69354900_69354979	0.00497784	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg19_v1_chr12_+_22199219_22199239	0.00497043	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr6_-_94129059_94129307	0.00496666	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg19_v1_chrX_+_72223351_72223481	0.00495027	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg19_v1_chrX_-_140786561_140786654	0.00494956	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg19_v1_chrX_+_48242967_48242967	0.0049426	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg19_v1_chr16_+_2563977_2563986	0.00493953	SOX2.p2	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr11_-_62783281_62783316	0.00493786	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg19_v1_chr7_-_94953734_94953815	0.00493689	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg19_v1_chr10_-_43892160_43892278	0.0048885	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg19_v1_chr17_+_42786188_42786287	0.00486934	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr4_-_83295136_83295171	0.0048646	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr1_-_8003224_8003224	0.00484242	SOX2.p2	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg19_v1_chr1_+_22328148_22328166	0.00483674	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg19_v1_chr8_+_133787611_133787673	0.00481954	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr9_+_39884941_39884982	0.004818	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr20_+_61147659_61147659	0.00480619	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg19_v1_chr21_-_30257611_30257715	0.00480605	SOX2.p2	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg19_v1_chr22_-_45405429_45405580	0.00479595	SOX2.p2	CU012999|PHF21B|112885|PHD finger protein 21B	CU013287|PHF21B|112885|PHD finger protein 21B	CR456448|PHF21B|112885|PHD finger protein 21B	BC012187|PHF21B|112885|PHD finger protein 21B	NM_138415|PHF21B|112885|PHD finger protein 21B
hg19_v1_chr12_-_102224509_102224663	0.00477868	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg19_v1_chr10_+_13203547_13203589	0.00476919	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr1_-_45956795_45956871	0.0047629	SOX2.p2	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg19_v1_chr6_-_88411948_88411949	0.00475695	SOX2.p2	AK222701|AKIRIN2|55122|akirin 2
hg19_v1_chr3_-_184971815_184971885	0.00475292	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg19_v1_chr12_-_109027654_109027671	0.00474387	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg19_v1_chr21_+_40177847_40177907	0.0047414	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg19_v1_chr1_+_20208837_20208891	0.00473689	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr10_+_105726935_105726994	0.004734	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg19_v1_chr4_-_76878558_76878565	0.00473207	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg19_v1_chr6_-_112575880_112575911	0.00472146	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chrX_+_96138906_96139035	0.00471214	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg19_v1_chr17_-_7518124_7518489	0.00469006	SOX2.p2	BC067272|FXR2|9513|fragile X mental retardation, autosomal homolog 2	BC020090|FXR2|9513|fragile X mental retardation, autosomal homolog 2	NM_004860|FXR2|9513|fragile X mental retardation, autosomal homolog 2
hg19_v1_chr6_+_36210944_36210979	0.00467693	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg19_v1_chr11_+_73498913_73498939	0.00467584	SOX2.p2	AF161408|MRPL48|51642|mitochondrial ribosomal protein L48	AK297746|MRPL48|51642|mitochondrial ribosomal protein L48	NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48	BC009764|MRPL48|51642|mitochondrial ribosomal protein L48	AK309219|MRPL48|51642|mitochondrial ribosomal protein L48	AK310005|MRPL48|51642|mitochondrial ribosomal protein L48
hg19_v1_chr12_-_122985471_122985566	0.00466219	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg19_v1_chr6_+_31707724_31707866	0.00462472	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6orf26|100532732|MSH5-C6orf26 readthrough (non-protein coding)	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg19_v1_chr3_-_64672285_64672305	0.00462221	SOX2.p2	AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg19_v1_chr7_-_45151297_45151328	0.00462172	SOX2.p2	AK300489|TBRG4|9238|transforming growth factor beta regulator 4	AL833840|TBRG4|9238|transforming growth factor beta regulator 4	AK001281|TBRG4|9238|transforming growth factor beta regulator 4	AB023165|TBRG4|9238|transforming growth factor beta regulator 4	NM_004749|TBRG4|9238|transforming growth factor beta regulator 4	NM_030900|TBRG4|9238|transforming growth factor beta regulator 4	NM_199122|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr6_-_79675672_79675833	0.00460386	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr12_-_56679729_56679874	0.00460033	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr6_-_47277640_47277640	0.00459785	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr5_-_60458146_60458210	0.00459638	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr12_+_109535922_109536131	0.00459592	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg19_v1_chr4_+_142142073_142142100	0.00458904	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg19_v1_chr2_-_87303105_87303560	0.00458433	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg19_v1_chr7_-_143991255_143991279	0.00458366	SOX2.p2	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr8_-_22014263_22014343	0.00457864	SOX2.p2	AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3	BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3	BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3	AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3	NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3
hg19_v1_chr2_+_32502988_32503072	0.0045768	SOX2.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr1_-_33502452_33502463	0.0045697	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2
hg19_v1_chr22_-_41940391_41940609	0.00456777	SOX2.p2	AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr7_-_33102174_33102471	0.00456589	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg19_v1_chr1_+_20208908_20208920	0.00456514	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr17_+_63133501_63133658	0.00455822	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg19_v1_chr6_-_89673347_89673347	0.0045559	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr6_+_153071931_153072041	0.00455524	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg19_v1_chr5_+_161275185_161275229	0.0045544	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v1_chr18_-_77711603_77711649	0.00454354	SOX2.p2	BC030140|PQLC1|80148|PQ loop repeat containing 1
hg19_v1_chr19_+_48972574_48972764	0.00453974	SOX2.p2	AB209573|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg19_v1_chr20_-_23807297_23807367	0.0045297	SOX2.p2	NM_001322|CST2|1470|cystatin SA	BC062679|CST2|1470|cystatin SA
hg19_v1_chr7_-_140179133_140179191	0.00452638	SOX2.p2	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr17_-_79828691_79828789	0.00451738	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr4_+_142142044_142142066	0.00450328	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg19_v1_chr3_+_150264514_150264575	0.00449222	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr6_+_74171610_74171703	0.00449221	SOX2.p2	AL833823|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)
hg19_v1_chr14_+_39734475_39734512	0.00447001	SOX2.p2	NM_203354|CTAGE5|4253|CTAGE family, member 5	AK298935|CTAGE5|4253|CTAGE family, member 5	BX640994|CTAGE5|4253|CTAGE family, member 5	BX648014|CTAGE5|4253|CTAGE family, member 5	AL832233|CTAGE5|4253|CTAGE family, member 5
hg19_v1_chr2_-_208489972_208490006	0.00445031	SOX2.p2	NM_001127395|METTL21A|151194|methyltransferase like 21A
hg19_v1_chr21_-_40721010_40721050	0.00440212	SOX2.p2	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr16_-_58663734_58663738	0.00439146	SOX2.p2	AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr6_+_64286348_64286872	0.00438147	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr17_+_61627818_61627834	0.00438078	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr3_+_184038050_184038206	0.00437706	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr12_+_54891491_54891519	0.00437494	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr8_-_81787015_81787015	0.00437004	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr22_+_29168628_29168661	0.00435522	SOX2.p2	AK289516|CCDC117|150275|coiled-coil domain containing 117	NM_173510|CCDC117|150275|coiled-coil domain containing 117
hg19_v1_chr17_+_80416530_80416597	0.00435414	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr18_-_21891469_21891469	0.00434059	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr14_-_75600111_75600130	0.00433671	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v1_chr4_+_119948322_119948327	0.00430774	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg19_v1_chr17_-_27278324_27278336	0.00429911	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg19_v1_chr19_+_50354417_50354643	0.00429508	SOX2.p2	AJ617480|PTOV1|53635|prostate tumor overexpressed 1	BC042921|PTOV1|53635|prostate tumor overexpressed 1	U79287|PTOV1|53635|prostate tumor overexpressed 1
hg19_v1_chr4_-_103265818_103265919	0.00428824	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr6_+_36644236_36644266	0.00427734	SOX2.p2	NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v1_chr6_-_47277646_47277744	0.00426501	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr3_-_87325611_87325736	0.00423901	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg19_v1_chr17_-_3182267_3182267	0.00423749	SOX2.p2	BC095517|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2	NM_002551|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2
hg19_v1_chr11_+_9596233_9596233	0.00423634	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg19_v1_chr9_+_15422862_15422874	0.00423035	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr3_+_49235860_49235860	0.00422965	SOX2.p2	BC036202|CCDC36|339834|coiled-coil domain containing 36	NM_178173|CCDC36|339834|coiled-coil domain containing 36
hg19_v1_chr7_-_26232148_26232154	0.00422802	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr7_-_140179333_140179368	0.00422299	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr1_-_120354058_120354202	0.00421664	SOX2.p2	AY007243|REG4|83998|regenerating islet-derived family, member 4	AF345934|REG4|83998|regenerating islet-derived family, member 4	BC017089|REG4|83998|regenerating islet-derived family, member 4	AF254415|REG4|83998|regenerating islet-derived family, member 4	AY126670|REG4|83998|regenerating islet-derived family, member 4	AY126671|REG4|83998|regenerating islet-derived family, member 4	AY126672|REG4|83998|regenerating islet-derived family, member 4	NM_001159352|REG4|83998|regenerating islet-derived family, member 4	NM_001159353|REG4|83998|regenerating islet-derived family, member 4	NM_032044|REG4|83998|regenerating islet-derived family, member 4
hg19_v1_chr6_-_135375954_135376035	0.00420134	SOX2.p2	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)	AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)	AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)	U87791|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)
hg19_v1_chr7_+_99775346_99775382	0.00419073	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg19_v1_chrX_+_52780279_52780345	0.00418234	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg19_v1_chrX_+_122318095_122318386	0.00417274	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg19_v1_chr1_+_43148187_43148234	0.00416569	SOX2.p2	DQ891609|YBX1|4904|Y box binding protein 1	DQ894802|YBX1|4904|Y box binding protein 1
hg19_v1_chr3_-_108672547_108672676	0.00415327	SOX2.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	AB593147|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg19_v1_chr2_+_113993082_113993458	0.00414881	SOX2.p2	AK056052|LOC654433|654433|uncharacterized LOC654433	AK307781|LOC654433|654433|uncharacterized LOC654433	BX537688|LOC654433|654433|uncharacterized LOC654433	AK056355|LOC654433|654433|uncharacterized LOC654433	AK130275|LOC654433|654433|uncharacterized LOC654433
hg19_v1_chr11_-_64545933_64545956	0.00414536	SOX2.p2	BC038446|SF1|7536|splicing factor 1	NM_001178030|SF1|7536|splicing factor 1
hg19_v1_chr16_-_48644087_48644145	0.00413403	SOX2.p2	BC051897|N4BP1|9683|NEDD4 binding protein 1	AB014515|N4BP1|9683|NEDD4 binding protein 1	BC152472|N4BP1|9683|NEDD4 binding protein 1	NM_153029|N4BP1|9683|NEDD4 binding protein 1
hg19_v1_chr20_+_35201948_35202055	0.00413187	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg19_v1_chr20_-_5295014_5295058	0.00412309	SOX2.p2	AB084081|PROKR2|128674|prokineticin receptor 2	AF506288|PROKR2|128674|prokineticin receptor 2	EF577398|PROKR2|128674|prokineticin receptor 2	NM_144773|PROKR2|128674|prokineticin receptor 2	BC104959|PROKR2|128674|prokineticin receptor 2	BC104961|PROKR2|128674|prokineticin receptor 2
hg19_v1_chr10_+_28822428_28822438	0.00410956	SOX2.p2	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr14_+_39583426_39583509	0.00410553	SOX2.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr6_-_89673127_89673255	0.00409493	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr6_+_148663728_148663798	0.00409339	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr3_+_115342302_115342536	0.00407943	SOX2.p2	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg19_v1_chr9_+_66457288_66457315	0.00406598	SOX2.p2	
hg19_v1_chrX_-_49121171_49121287	0.00406343	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg19_v1_chr6_-_10694837_10694838	0.00405931	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg19_v1_chr7_-_20826503_20826565	0.00405444	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg19_v1_chr3_+_2933898_2933920	0.00405039	SOX2.p2	NM_001206956|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4
hg19_v1_chr6_-_33168448_33168450	0.00404775	SOX2.p2	AK300402|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr6_+_148664124_148664259	0.00404461	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chrX_+_30261847_30261847	0.00404312	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr5_+_175792444_175792534	0.00402569	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg19_v1_chr17_-_43510279_43510295	0.00401893	SOX2.p2	BC067345|ARHGAP27|201176|Rho GTPase activating protein 27	NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr11_-_119066583_119066583	0.00401882	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg19_v1_chr16_-_11680146_11680228	0.00401241	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr7_+_114055234_114055377	0.00400388	SOX2.p2	AF493430|FOXP2|93986|forkhead box P2	AF337817|FOXP2|93986|forkhead box P2	AF467257|FOXP2|93986|forkhead box P2	BC126104|FOXP2|93986|forkhead box P2	BC143866|FOXP2|93986|forkhead box P2	BC143867|FOXP2|93986|forkhead box P2
hg19_v1_chr1_-_150241210_150241399	0.00399064	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr12_-_30830143_30830177	0.0039894	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg19_v1_chr7_-_6388408_6388613	0.00398892	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg19_v1_chrY_+_1683940_1684067	0.00395319	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr17_-_36831156_36831214	0.00394079	SOX2.p2	NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96
hg19_v1_chr3_-_10547340_10547352	0.00393954	SOX2.p2	AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr3_+_150264576_150264596	0.00392057	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr5_+_148731226_148731336	0.00391328	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg19_v1_chr4_-_103266286_103266367	0.00390899	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr12_-_53045947_53045958	0.0039067	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg19_v1_chr5_-_39364562_39364654	0.00390426	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg19_v1_chr15_-_35046688_35046781	0.00388644	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg19_v1_chr1_+_87794150_87794164	0.00387007	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg19_v1_chr17_-_38859976_38860001	0.00386692	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg19_v1_chr17_+_66031885_66031892	0.00386306	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr7_+_148892553_148892826	0.00385829	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg19_v1_chr3_-_186079776_186080093	0.00385795	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg19_v1_chr4_+_71587674_71587767	0.00384913	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr9_+_39355665_39355706	0.00384463	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg19_v1_chr6_-_32160289_32160441	0.00384321	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chr10_+_11047274_11047297	0.00383125	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr7_+_27779810_27779828	0.00381921	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr13_-_39612183_39612220	0.00381909	SOX2.p2	AK074360|PROSER1|80209|proline and serine rich 1	AB107354|PROSER1|80209|proline and serine rich 1
hg19_v1_chr22_-_41940319_41940388	0.00381867	SOX2.p2	AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr11_+_67195886_67196031	0.00381516	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg19_v1_chr1_+_10459084_10459174	0.00381182	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr19_+_51728319_51728367	0.00380858	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg19_v1_chr4_+_156680125_156680283	0.00380744	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr17_-_72527512_72527574	0.00380254	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg19_v1_chr3_+_184032849_184033283	0.00379923	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr17_+_64831234_64831237	0.00379452	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg19_v1_chr1_+_199996729_199997010	0.0037916	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg19_v1_chr6_+_126070738_126070795	0.00378952	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr12_+_45609832_45609866	0.003771	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg19_v1_chr11_-_69634191_69634191	0.00376657	SOX2.p2	NM_005247|FGF3|2248|fibroblast growth factor 3
hg19_v1_chr19_-_41903226_41903372	0.00376347	SOX2.p2	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg19_v1_chr2_-_106810781_106810830	0.00376236	SOX2.p2	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chrX_-_138287180_138287215	0.00375776	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr11_+_114271294_114271368	0.00374802	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chrX_+_38211735_38211913	0.00374205	SOX2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg19_v1_chr6_-_100016517_100016689	0.00373739	SOX2.p2	BC010135|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg19_v1_chr6_-_52774460_52774495	0.00373401	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg19_v1_chr15_+_67430358_67430358	0.00372365	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg19_v1_chr6_+_42982013_42982022	0.00370681	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr12_-_49245904_49245961	0.00370493	SOX2.p2	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v1_chr6_+_34204690_34204721	0.003687	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr17_+_61627916_61627973	0.00368629	SOX2.p2	U94747|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr12_+_510740_510822	0.00368548	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr3_+_10857867_10857947	0.0036836	SOX2.p2	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
hg19_v1_chr12_+_6898605_6898642	0.00366622	SOX2.p2	NM_000616|CD4|920|CD4 molecule	NM_001195014|CD4|920|CD4 molecule	NM_001195015|CD4|920|CD4 molecule	NM_001195016|CD4|920|CD4 molecule	NM_001195017|CD4|920|CD4 molecule
hg19_v1_chr12_+_105380073_105380107	0.00366279	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg19_v1_chr14_+_75283664_75283737	0.00364964	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg19_v1_chr13_-_111213865_111214079	0.00363455	SOX2.p2	AJ272065|RAB20|55647|RAB20, member RAS oncogene family	DQ892145|RAB20|55647|RAB20, member RAS oncogene family	DQ895340|RAB20|55647|RAB20, member RAS oncogene family	AK000436|RAB20|55647|RAB20, member RAS oncogene family	AK000446|RAB20|55647|RAB20, member RAS oncogene family	NM_017817|RAB20|55647|RAB20, member RAS oncogene family	BC026025|RAB20|55647|RAB20, member RAS oncogene family
hg19_v1_chr4_+_1723212_1723223	0.00363113	SOX2.p2	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr12_-_111893857_111893989	0.00361836	SOX2.p2	
hg19_v1_chr11_+_65407591_65407591	0.00360796	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg19_v1_chr18_+_21719447_21719450	0.00360702	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v1_chr17_+_34171647_34171928	0.00360408	SOX2.p2	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg19_v1_chr3_+_10068097_10068121	0.00359845	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr15_-_26961911_26961911	0.00359665	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v1_chr11_-_107729523_107729653	0.00359629	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chrY_+_2803409_2803517	0.00358844	SOX2.p2	AK301061|ZFY|7544|zinc finger protein, Y-linked	NM_001145275|ZFY|7544|zinc finger protein, Y-linked	NM_003411|ZFY|7544|zinc finger protein, Y-linked
hg19_v1_chr10_+_7745229_7745282	0.00357556	SOX2.p2	NM_002216|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr14_-_38725253_38725315	0.0035749	SOX2.p2	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg19_v1_chr10_+_98592015_98592092	0.0035581	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg19_v1_chr13_+_97999289_97999300	0.00355132	SOX2.p2	
hg19_v1_chr6_+_31783314_31783357	0.00354996	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK295398|HSPA1B|3304|heat shock 70kDa protein 1B	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chr8_-_30706532_30706607	0.00354165	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg19_v1_chr4_+_123161119_123161129	0.00353737	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr1_+_171810611_171810796	0.0035303	SOX2.p2	NM_001136127|DNM3|26052|dynamin 3	NM_015569|DNM3|26052|dynamin 3	AK056279|DNM3|26052|dynamin 3	AL136712|DNM3|26052|dynamin 3	AB020627|DNM3|26052|dynamin 3	AK308992|DNM3|26052|dynamin 3	AK307806|DNM3|26052|dynamin 3	BC064546|DNM3|26052|dynamin 3	AM393667|DNM3|26052|dynamin 3	AM393846|DNM3|26052|dynamin 3
hg19_v1_chr3_-_126373873_126373956	0.00352933	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr18_+_3447607_3447627	0.00352277	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr17_-_37353731_37353979	0.00350823	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr8_+_133787556_133787610	0.00350002	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr17_+_75369236_75369271	0.00349866	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg19_v1_chr2_+_181845088_181845363	0.00349519	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr7_-_129845216_129845337	0.00348427	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg19_v1_chr12_-_62586547_62586619	0.00347799	SOX2.p2	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v1_chrY_+_14813159_14813159	0.00347191	SOX2.p2	AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked	NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked
hg19_v1_chr5_-_121814781_121814785	0.00346969	SOX2.p2	
hg19_v1_chr3_-_186857188_186857324	0.00346794	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr2_+_29117503_29117573	0.00346467	SOX2.p2	NM_015131|WDR43|23160|WD repeat domain 43	D26488|WDR43|23160|WD repeat domain 43
hg19_v1_chr2_-_130929945_130930057	0.00346288	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg19_v1_chr9_+_132597728_132597802	0.00346132	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr22_+_39077960_39077974	0.00346077	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr4_-_145061787_145061903	0.00345045	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg19_v1_chr12_-_109027565_109027584	0.00345014	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg19_v1_chr15_+_38746303_38746387	0.00343527	SOX2.p2	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B	NM_173611|FAM98B|283742|family with sequence similarity 98, member B	AK095745|FAM98B|283742|family with sequence similarity 98, member B	BC093898|FAM98B|283742|family with sequence similarity 98, member B
hg19_v1_chr8_+_61429543_61429550	0.00343054	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr5_-_147211235_147211259	0.00341366	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg19_v1_chr11_-_10830581_10830672	0.00341221	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr5_-_150284390_150284406	0.00340461	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg19_v1_chr7_-_82792127_82792345	0.00339246	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg19_v1_chr9_+_15422875_15422949	0.00339085	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr16_-_29937539_29937570	0.00338763	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr18_-_52625278_52625278	0.00338388	SOX2.p2	AK058097|CCDC68|80323|coiled-coil domain containing 68	NM_001143829|CCDC68|80323|coiled-coil domain containing 68
hg19_v1_chr9_-_4152182_4152182	0.00337172	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg19_v1_chr18_-_74728963_74729028	0.00334843	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr19_+_48673936_48673971	0.00334648	SOX2.p2	BC043386|C19orf68|374920|chromosome 19 open reading frame 68
hg19_v1_chr19_+_40854529_40854652	0.00334335	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr19_+_10791025_10791071	0.00333294	SOX2.p2	
hg19_v1_chr8_+_146277789_146277826	0.00332853	SOX2.p2	NM_023080|C8orf33|65265|chromosome 8 open reading frame 33	AK024642|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr1_-_27930101_27930142	0.00331577	SOX2.p2	NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1
hg19_v1_chr11_+_92085261_92085261	0.00330875	SOX2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr16_+_24266873_24266875	0.00330428	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg19_v1_chr15_-_73925555_73925617	0.00329587	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr6_-_47277354_47277423	0.00329109	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr20_-_1165116_1165116	0.00328442	SOX2.p2	AK002052|TMEM74B|55321|transmembrane protein 74B	NM_018354|TMEM74B|55321|transmembrane protein 74B
hg19_v1_chr6_+_42981986_42981992	0.00328174	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr22_-_42084819_42084912	0.00326597	SOX2.p2	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v1_chr3_+_35721115_35721278	0.00326567	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr5_-_122759003_122759285	0.00324042	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg19_v1_chr3_+_47844398_47844625	0.0032334	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr11_+_8102691_8102908	0.00323047	SOX2.p2	NM_177972|TUB|7275|tubby homolog (mouse)	U54644|TUB|7275|tubby homolog (mouse)
hg19_v1_chr20_+_35974458_35974556	0.00322366	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg19_v1_chr13_+_37393306_37393493	0.00321569	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg19_v1_chr11_+_65819803_65819877	0.00321399	SOX2.p2	NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa
hg19_v1_chr17_-_8055684_8055757	0.00321065	SOX2.p2	AB088477|PER1|5187|period homolog 1 (Drosophila)	AF022991|PER1|5187|period homolog 1 (Drosophila)	AK291061|PER1|5187|period homolog 1 (Drosophila)	NM_002616|PER1|5187|period homolog 1 (Drosophila)
hg19_v1_chr17_-_79829174_79829235	0.0032049	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr15_-_50647349_50647361	0.00319796	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr13_-_101327027_101327085	0.00319407	SOX2.p2	AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4
hg19_v1_chr15_+_40453209_40453250	0.00318852	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chr7_-_115608366_115608366	0.0031759	SOX2.p2	AJ608795|TFEC|22797|transcription factor EC	NM_001244583|TFEC|22797|transcription factor EC
hg19_v1_chr19_-_48389571_48389653	0.00317578	SOX2.p2	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg19_v1_chr14_+_65878579_65878661	0.00317495	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr12_-_57873628_57873632	0.00317204	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr11_+_36616039_36616170	0.00316508	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg19_v1_chr10_+_105727469_105727505	0.00316051	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg19_v1_chr22_+_39077953_39077957	0.00315973	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr14_+_24521099_24521253	0.00315669	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chr22_-_41682169_41682183	0.0031484	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr13_-_41706587_41707003	0.00314459	SOX2.p2	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg19_v1_chr12_-_80307690_80307690	0.00314089	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chr7_-_155604815_155604966	0.00312839	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg19_v1_chr19_+_4007690_4007768	0.00311803	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg19_v1_chr7_+_77166750_77166863	0.00311573	SOX2.p2	NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg19_v1_chr8_+_65492794_65492923	0.00310781	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg19_v1_chr20_+_36149606_36149733	0.00310618	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr19_+_55141907_55142027	0.00309826	SOX2.p2	NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
hg19_v1_chrX_+_148769902_148769902	0.00309421	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg19_v1_chr6_+_42982002_42982011	0.00309263	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr9_-_132597561_132597598	0.00309112	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr10_+_81073763_81073916	0.00308699	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg19_v1_chr2_-_172967234_172967477	0.00307924	SOX2.p2	HQ258018|DLX2|1746|distal-less homeobox 2	AB208823|DLX2|1746|distal-less homeobox 2	AK297503|DLX2|1746|distal-less homeobox 2	BC032558|DLX2|1746|distal-less homeobox 2	NM_004405|DLX2|1746|distal-less homeobox 2
hg19_v1_chr14_-_38725539_38725573	0.00307922	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg19_v1_chr19_-_56739658_56739679	0.00307322	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg19_v1_chr6_+_32939974_32940002	0.00306684	SOX2.p2	BC007715|BRD2|6046|bromodomain containing 2	BC001885|BRD2|6046|bromodomain containing 2	BC000477|BRD2|6046|bromodomain containing 2
hg19_v1_chr10_-_123687380_123687671	0.00306404	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg19_v1_chr6_-_137540544_137540546	0.00305942	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chr10_+_35535952_35535952	0.00305884	SOX2.p2	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg19_v1_chr19_+_50180408_50180491	0.00303724	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1	NM_001207042|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr22_+_30279201_30279321	0.00303526	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg19_v1_chr19_+_1026627_1026697	0.00301846	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg19_v1_chr13_+_99852678_99852678	0.00300565	SOX2.p2	AK290342|UBAC2|337867|UBA domain containing 2	NM_001144072|UBAC2|337867|UBA domain containing 2
hg19_v1_chr1_-_53793743_53793820	0.00300403	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr19_-_18548118_18548118	0.00299519	SOX2.p2	AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr9_+_132597651_132597717	0.00299344	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr18_-_22930826_22931470	0.00298773	SOX2.p2	
hg19_v1_chr1_-_156722023_156722239	0.00298336	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg19_v1_chr15_-_50647385_50647400	0.00297873	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr2_-_219157207_219157303	0.00297353	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg19_v1_chr1_-_226497197_226497197	0.00297077	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr22_+_42394728_42394822	0.00295637	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg19_v1_chr2_-_38829973_38830012	0.00295229	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr1_-_246580710_246580713	0.0029462	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg19_v1_chr3_-_109035239_109035363	0.00292041	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg19_v1_chr1_+_220267418_220267487	0.00291281	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr6_+_34204647_34204654	0.00291236	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr3_+_100053544_100053671	0.0029075	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg19_v1_chr6_-_32920812_32920898	0.00290726	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg19_v1_chrX_-_46404821_46404891	0.00290653	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg19_v1_chr10_+_49892860_49892920	0.00289838	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg19_v1_chr12_-_117742856_117742856	0.00289434	SOX2.p2	NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg19_v1_chr6_+_42981975_42981984	0.00288819	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr9_-_35072545_35072569	0.00288057	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg19_v1_chr5_+_34656595_34656599	0.00286665	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chr7_-_122839999_122840024	0.00286476	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr10_-_23633771_23633771	0.00284842	SOX2.p2	BC035732|C10orf67|256815|chromosome 10 open reading frame 67	NM_153714|C10orf67|256815|chromosome 10 open reading frame 67
hg19_v1_chr11_-_64545231_64545231	0.00284594	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg19_v1_chr19_-_52408240_52408304	0.00284526	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg19_v1_chr10_-_97321094_97321184	0.00283478	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg19_v1_chr13_+_31774087_31774119	0.00283158	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr12_+_31079837_31079891	0.00282492	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg19_v1_chr12_+_57916607_57916693	0.00282259	SOX2.p2	AK056399|MBD6|114785|methyl-CpG binding domain protein 6	AK296990|MBD6|114785|methyl-CpG binding domain protein 6	NM_052897|MBD6|114785|methyl-CpG binding domain protein 6	BC065530|MBD6|114785|methyl-CpG binding domain protein 6
hg19_v1_chr17_+_61627841_61627849	0.00282034	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr9_+_103191795_103191795	0.00281719	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr13_-_48987017_48987244	0.00281717	SOX2.p2	AK223389|LPAR6|10161|lysophosphatidic acid receptor 6	BC070295|LPAR6|10161|lysophosphatidic acid receptor 6	BC054346|LPAR6|10161|lysophosphatidic acid receptor 6	BC040850|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr21_-_40685545_40685593	0.00280899	SOX2.p2	BC064602|BRWD1|54014|bromodomain and WD repeat domain containing 1	BC142986|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr6_+_96025343_96025460	0.00280082	SOX2.p2	NM_024641|MANEA|79694|mannosidase, endo-alpha	BX640869|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg19_v1_chr4_-_121993568_121993693	0.00280076	SOX2.p2	BC019351|NDNF|79625|neuron-derived neurotrophic factor	AK289615|NDNF|79625|neuron-derived neurotrophic factor	NM_024574|NDNF|79625|neuron-derived neurotrophic factor
hg19_v1_chr1_-_143767849_143767880	0.00278411	SOX2.p2	HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg19_v1_chr11_+_33279859_33279879	0.00277662	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr13_-_48877796_48877822	0.00276943	SOX2.p2	
hg19_v1_chr6_+_139094656_139094925	0.00276863	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr3_+_157827849_157827933	0.00276175	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr18_+_76829410_76829489	0.00276082	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg19_v1_chr7_-_140179224_140179316	0.0027572	SOX2.p2	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr9_+_137218313_137218318	0.00275356	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg19_v1_chr7_-_141401889_141401980	0.00273861	SOX2.p2	AB032973|KIAA1147|57189|KIAA1147	NM_001080392|KIAA1147|57189|KIAA1147
hg19_v1_chr6_-_100016403_100016511	0.00273766	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg19_v1_chr11_-_104034685_104034903	0.00272617	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg19_v1_chr1_-_173837122_173837133	0.00271872	SOX2.p2	AL110141|GAS5|60674|growth arrest-specific 5 (non-protein coding)	BC038733|GAS5|60674|growth arrest-specific 5 (non-protein coding)
hg19_v1_chr4_+_1723233_1723303	0.00270063	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr3_+_183852809_183852825	0.00269413	SOX2.p2	BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg19_v1_chr12_+_95611514_95611874	0.00268418	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg19_v1_chr15_-_65282093_65282176	0.00267498	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr2_+_39892637_39892637	0.00267274	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg19_v1_chr2_+_11680079_11680128	0.00266877	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr19_-_1652327_1652352	0.00266217	SOX2.p2	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg19_v1_chr7_+_114055048_114055146	0.00265926	SOX2.p2	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg19_v1_chr17_+_42786060_42786065	0.00265403	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr6_-_34101272_34101532	0.00265387	SOX2.p2	EU432124|GRM4|2914|glutamate receptor, metabotropic 4	HQ258665|GRM4|2914|glutamate receptor, metabotropic 4	HQ258669|GRM4|2914|glutamate receptor, metabotropic 4	U92457|GRM4|2914|glutamate receptor, metabotropic 4	BC130526|GRM4|2914|glutamate receptor, metabotropic 4	BC130528|GRM4|2914|glutamate receptor, metabotropic 4	BC144057|GRM4|2914|glutamate receptor, metabotropic 4	NM_000841|GRM4|2914|glutamate receptor, metabotropic 4	X80818|GRM4|2914|glutamate receptor, metabotropic 4
hg19_v1_chr19_+_41770285_41770328	0.00264815	SOX2.p2	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr1_+_166808721_166808770	0.0026464	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr13_-_48987652_48987652	0.00263965	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr13_+_45694647_45694790	0.00263227	SOX2.p2	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr19_+_10713055_10713212	0.00263078	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg19_v1_chr2_+_219524446_219524504	0.00260548	SOX2.p2	BC000416|BCS1L|617|BCS1-like (S. cerevisiae)	BC007500|BCS1L|617|BCS1-like (S. cerevisiae)	AF026849|BCS1L|617|BCS1-like (S. cerevisiae)	AK096210|BCS1L|617|BCS1-like (S. cerevisiae)
hg19_v1_chr19_+_41903718_41903722	0.00258623	SOX2.p2	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg19_v1_chr10_+_104179570_104179588	0.00258525	SOX2.p2	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15	BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15
hg19_v1_chr13_-_26795821_26795893	0.00258332	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr5_+_72251753_72251817	0.00257712	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg19_v1_chr14_-_74892804_74892804	0.00257702	SOX2.p2	NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like
hg19_v1_chr1_-_52344010_52344058	0.00257673	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr12_-_110906007_110906053	0.00257639	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr14_-_23564294_23564334	0.00257569	SOX2.p2	AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1	AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1
hg19_v1_chr6_-_27799304_27799337	0.0025719	SOX2.p2	NM_003541|HIST1H4K|8362|histone cluster 1, H4k	BC148271|HIST1H4J|8363|histone cluster 1, H4j	DQ892605|HIST1H4F|8361|histone cluster 1, H4f	DQ895845|HIST1H4F|8361|histone cluster 1, H4f	EU446976|HIST1H4A|8359|histone cluster 1, H4a	AK312028|HIST1H4K|8362|histone cluster 1, H4k
hg19_v1_chr6_+_3259185_3259293	0.00257063	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr22_-_20104695_20104728	0.00257035	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr19_-_51017765_51017965	0.00257029	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg19_v1_chr8_-_103876390_103876400	0.00256311	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr9_-_128003615_128003632	0.00256184	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr6_-_76203256_76203497	0.00256138	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg19_v1_chr6_-_49712055_49712167	0.0025591	SOX2.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr3_-_139258531_139258670	0.00255394	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr18_-_3219846_3219875	0.00254963	SOX2.p2	BC116183|MYOM1|8736|myomesin 1, 185kDa	BC116184|MYOM1|8736|myomesin 1, 185kDa
hg19_v1_chr6_+_42981955_42981958	0.00254514	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr14_+_67827042_67827058	0.00254197	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_-_50360109_50360280	0.00253863	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr3_-_129158849_129158894	0.00252656	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr9_-_127533397_127533624	0.00252648	SOX2.p2	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1
hg19_v1_chr11_+_114271372_114271432	0.00251926	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr15_+_34261088_34261088	0.00251902	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg19_v1_chr12_+_27863761_27863788	0.00251839	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg19_v1_chr14_+_42076763_42076772	0.00251305	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg19_v1_chr1_-_212588073_212588234	0.0024933	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg19_v1_chr14_-_47812394_47812437	0.00248517	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v1_chr12_+_53845911_53845945	0.00247972	SOX2.p2	BC035420|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr11_+_44117098_44117251	0.00247237	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg19_v1_chr2_+_70314714_70314723	0.00247129	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr19_+_50180492_50180551	0.00246724	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr8_-_18871163_18871410	0.0024672	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr6_+_42982027_42982066	0.00246544	SOX2.p2	BC001793|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr19_+_41770329_41770330	0.00246309	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr17_-_79478956_79479000	0.00246289	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chrX_+_150151757_150151857	0.00245442	SOX2.p2	BX537505|HMGB3|3149|high mobility group box 3	NM_005342|HMGB3|3149|high mobility group box 3	Y10043|HMGB3|3149|high mobility group box 3	BC070482|HMGB3|3149|high mobility group box 3
hg19_v1_chr1_-_200379165_200379223	0.00245242	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg19_v1_chr17_+_13972718_13972840	0.00244431	SOX2.p2	NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg19_v1_chr1_+_161169104_161169104	0.00242522	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg19_v1_chr6_+_123110345_123110490	0.00242191	SOX2.p2	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr7_-_124405680_124405913	0.00242107	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v1_chr13_-_26795927_26796027	0.00242067	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr6_+_123109970_123109970	0.00241589	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr3_+_4535030_4535033	0.0024076	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v1_chrX_-_16730669_16731058	0.0023996	SOX2.p2	NM_175859|CTPS2|56474|CTP synthase II	BC034986|CTPS2|56474|CTP synthase II	AK125348|CTPS2|56474|CTP synthase II	AF226667|CTPS2|56474|CTP synthase II	AK024070|CTPS2|56474|CTP synthase II	AK023549|CTPS2|56474|CTP synthase II	NM_019857|CTPS2|56474|CTP synthase II
hg19_v1_chr14_+_21214098_21214127	0.00239317	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg19_v1_chr9_+_135906373_135906403	0.00238738	SOX2.p2	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v1_chr8_-_10512616_10512665	0.00238705	SOX2.p2	AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1	NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1	AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1
hg19_v1_chr11_+_126173646_126173646	0.00237776	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr10_-_52645430_52645440	0.00237595	SOX2.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr1_+_155108276_155108342	0.00237065	SOX2.p2	AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg19_v1_chr2_-_55277653_55277671	0.00236581	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg19_v1_chr6_-_108582124_108582163	0.00235829	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chr21_-_27543445_27543445	0.00235523	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr5_+_138678130_138678198	0.00234746	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr17_+_75369372_75369479	0.00234074	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg19_v1_chr10_+_102123420_102123604	0.00234028	SOX2.p2	
hg19_v1_chr5_-_82373253_82373271	0.00233832	SOX2.p2	NM_174909|TMEM167A|153339|transmembrane protein 167A
hg19_v1_chr1_+_155293727_155293727	0.00233587	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr7_+_73868111_73868218	0.00232913	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg19_v1_chr6_-_30640618_30640780	0.0023252	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chrX_-_100603673_100603749	0.00232489	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v1_chr6_-_30640781_30640829	0.00232474	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chr1_-_27226937_27226965	0.00232297	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr2_+_39893021_39893114	0.00230699	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg19_v1_chr20_+_21106623_21106706	0.00229682	SOX2.p2	NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1	NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1	AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1	BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1	AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1	AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1
hg19_v1_chr4_-_26491888_26492083	0.00229521	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg19_v1_chr13_+_98605928_98605947	0.00229178	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg19_v1_chr2_+_127413739_127413845	0.00229094	SOX2.p2	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg19_v1_chr19_+_41770336_41770347	0.00229049	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr6_+_71276606_71276645	0.00228706	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg19_v1_chr15_+_45248902_45248914	0.00228421	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg19_v1_chr1_+_117602944_117602964	0.00227513	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg19_v1_chr19_+_41770273_41770281	0.00227046	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr9_-_139334250_139334266	0.00226568	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr12_-_110906056_110906088	0.00225779	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr6_+_29274402_29274466	0.00224002	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg19_v1_chr17_-_3500335_3500391	0.00223406	SOX2.p2	AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1
hg19_v1_chr21_+_17102370_17102712	0.00222631	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr9_-_35072596_35072636	0.00222564	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg19_v1_chr14_-_58893867_58893909	0.00222095	SOX2.p2	AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr8_-_23261675_23261721	0.00221718	SOX2.p2	NM_002318|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr12_+_49297892_49297953	0.00221221	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg19_v1_chr19_+_51728369_51728373	0.00220929	SOX2.p2	BC028152|CD33|945|CD33 molecule	AK304810|CD33|945|CD33 molecule	DQ891726|CD33|945|CD33 molecule	DQ894903|CD33|945|CD33 molecule
hg19_v1_chr6_-_31633390_31633407	0.00220692	SOX2.p2	NM_001199240|GPANK1|7918|G patch domain and ankyrin repeats 1
hg19_v1_chr12_+_120907599_120907691	0.00220674	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr4_+_184580483_184580539	0.0022065	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr13_-_111567335_111567395	0.00220549	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10
hg19_v1_chr22_-_18257238_18257430	0.00220333	SOX2.p2	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_001244569|BID|637|BH3 interacting domain death agonist	NM_001244570|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist	NM_001244567|BID|637|BH3 interacting domain death agonist
hg19_v1_chr6_-_33756885_33756897	0.00218969	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg19_v1_chr17_+_59477169_59477304	0.00218422	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg19_v1_chr1_-_247171302_247171323	0.00217548	SOX2.p2	BC023527|ZNF695|57116|zinc finger protein 695
hg19_v1_chr16_-_72206023_72206063	0.00217394	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr3_+_10068139_10068182	0.00216479	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr17_-_74068597_74068631	0.00216148	SOX2.p2	AK002002|SRP68|6730|signal recognition particle 68kDa	NM_014230|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr12_-_46662709_46662777	0.00215358	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr6_-_84140758_84140825	0.00214889	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr4_-_120550142_120550183	0.0021455	SOX2.p2	
hg19_v1_chr6_-_31830551_31830592	0.00213749	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg19_v1_chr10_+_101088794_101088855	0.0021373	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr10_+_28822508_28822585	0.00213644	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr6_+_116832807_116832835	0.00213398	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg19_v1_chr13_-_28194538_28194670	0.00213384	SOX2.p2	BC036755|LNX2|222484|ligand of numb-protein X 2
hg19_v1_chr15_+_40453263_40453421	0.00213316	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg19_v1_chrX_-_128977719_128977938	0.00212426	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr18_-_29264394_29264685	0.00212335	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr6_-_27835308_27835370	0.0021179	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr15_-_50647275_50647325	0.00211662	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr7_+_150020548_150020604	0.00210994	SOX2.p2	BC001354|LRRC61|65999|leucine rich repeat containing 61
hg19_v1_chr10_-_11653529_11653744	0.00210075	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr22_+_20105145_20105170	0.00208727	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr17_-_10421858_10421858	0.0020862	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg19_v1_chr22_+_20105068_20105075	0.00207989	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr2_+_181845368_181845372	0.00206637	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr3_+_48956272_48956295	0.00206515	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr5_+_137688386_137688484	0.00206429	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr12_+_112280278_112280363	0.00205958	SOX2.p2	NM_003668|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	NM_139078|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	BC047284|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5
hg19_v1_chr6_+_126070895_126070922	0.00205758	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr6_-_108279320_108279347	0.00205276	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr11_-_62369097_62369177	0.00204895	SOX2.p2	BC023656|MTA2|9219|metastasis associated 1 family, member 2	BC053650|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr2_+_241375030_241375131	0.00204757	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg19_v1_chr17_-_46671043_46671158	0.00204704	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg19_v1_chr1_+_192127591_192127616	0.00204476	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr12_+_16500528_16500711	0.0020405	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg19_v1_chr1_+_28844762_28844803	0.00203874	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr6_-_88411872_88411946	0.00203725	SOX2.p2	BC000764|AKIRIN2|55122|akirin 2	BC003042|AKIRIN2|55122|akirin 2
hg19_v1_chr12_+_54891522_54891536	0.00203491	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg19_v1_chr1_-_247171354_247171394	0.00203446	SOX2.p2	BC055096|ZNF695|57116|zinc finger protein 695	NM_001204221|ZNF695|57116|zinc finger protein 695	NM_020394|ZNF695|57116|zinc finger protein 695
hg19_v1_chr18_+_60383895_60383958	0.00203282	SOX2.p2	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1
hg19_v1_chr9_-_139334267_139334273	0.00203162	SOX2.p2	AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr6_+_3259134_3259183	0.00202795	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr10_-_13390018_13390061	0.00202531	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr3_-_192445344_192445387	0.00202405	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg19_v1_chr12_+_70636773_70636809	0.0020229	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	NM_001199302|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg19_v1_chr19_+_13135809_13135860	0.00201716	SOX2.p2	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr2_-_232329064_232329207	0.00200721	SOX2.p2	AK000221|NCL|4691|nucleolin	AK091742|NCL|4691|nucleolin	AK095897|NCL|4691|nucleolin	AK122805|NCL|4691|nucleolin	NM_005381|NCL|4691|nucleolin	AK127608|NCL|4691|nucleolin
hg19_v1_chr17_-_8079607_8079713	0.00200511	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr11_-_116658701_116658729	0.00200344	SOX2.p2	AK301227|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg19_v1_chr15_+_63796793_63796962	0.00199983	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg19_v1_chr12_+_45609891_45609924	0.00199004	SOX2.p2	BC098410|ANO6|196527|anoctamin 6
hg19_v1_chr17_+_79213104_79213165	0.00198885	SOX2.p2	BC127837|C17orf89|284184|chromosome 17 open reading frame 89	NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89	BC079831|C17orf89|284184|chromosome 17 open reading frame 89
hg19_v1_chr11_+_44117746_44117772	0.00197997	SOX2.p2	NM_000401|EXT2|2132|exostosin 2	BX648142|EXT2|2132|exostosin 2
hg19_v1_chr7_+_96635289_96635289	0.00197925	SOX2.p2	NM_005222|DLX6|1750|distal-less homeobox 6
hg19_v1_chr2_-_25391558_25391558	0.00196366	SOX2.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg19_v1_chr16_-_75590107_75590225	0.00196163	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg19_v1_chr6_-_53213699_53213743	0.00196108	SOX2.p2	AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5	AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5	BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5	BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr6_-_88411649_88411675	0.0019565	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg19_v1_chr15_-_73925658_73925795	0.00195475	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chr3_+_58223228_58223338	0.00194309	SOX2.p2	NM_020676|ABHD6|57406|abhydrolase domain containing 6	AK225942|ABHD6|57406|abhydrolase domain containing 6	AK172797|ABHD6|57406|abhydrolase domain containing 6	AK313168|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr6_+_42982221_42982242	0.00193943	SOX2.p2	NM_001242872|KLHDC3|116138|kelch domain containing 3	AK302336|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr19_+_16244837_16244837	0.00193714	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg19_v1_chr7_+_27779743_27779807	0.00193453	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chrX_+_153030956_153030966	0.00193159	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg19_v1_chr12_+_19282402_19282729	0.0019254	SOX2.p2	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5
hg19_v1_chr5_+_68666531_68666531	0.0019243	SOX2.p2	AF076838|RAD17|5884|RAD17 homolog (S. pombe)	NM_002873|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr1_+_200842082_200842165	0.0019132	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg19_v1_chr5_+_170847059_170847203	0.00190546	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr10_+_111765725_111765838	0.00190436	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg19_v1_chr12_+_69080722_69080805	0.00189812	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr2_-_96874569_96874628	0.00189745	SOX2.p2	NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg19_v1_chr9_+_125703111_125703346	0.00189414	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg19_v1_chr14_-_27066959_27067018	0.00188533	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr21_+_38791206_38791206	0.00187753	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chr3_-_119963141_119963141	0.0018735	SOX2.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg19_v1_chr2_+_113033146_113033177	0.0018731	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg19_v1_chr1_+_43148168_43148173	0.00186849	SOX2.p2	BC015208|YBX1|4904|Y box binding protein 1
hg19_v1_chrX_+_128674181_128674416	0.00186264	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr16_-_29937354_29937518	0.00185562	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr17_-_46692300_46692300	0.0018551	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg19_v1_chr16_-_21663962_21663991	0.00184082	SOX2.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr19_-_46148606_46148841	0.00183899	SOX2.p2	AK296258|EML2|24139|echinoderm microtubule associated protein like 2	AK294668|EML2|24139|echinoderm microtubule associated protein like 2	NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2	BC029304|EML2|24139|echinoderm microtubule associated protein like 2
hg19_v1_chr10_-_118429469_118429480	0.00183374	SOX2.p2	AK097587|C10orf82|143379|chromosome 10 open reading frame 82	BC021737|C10orf82|143379|chromosome 10 open reading frame 82	NM_144661|C10orf82|143379|chromosome 10 open reading frame 82
hg19_v1_chr13_+_34392205_34392250	0.00183177	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr1_-_23696267_23696358	0.00181721	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr13_-_27334777_27334929	0.00181539	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg19_v1_chr9_-_107690336_107690433	0.00181336	SOX2.p2	BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr6_+_42531767_42531787	0.00179563	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr2_+_70314696_70314711	0.00178596	SOX2.p2	U24223|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr1_+_242012032_242012139	0.00178529	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr6_-_108582167_108582221	0.0017832	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr1_+_155294217_155294367	0.00178248	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr4_-_55991746_55991763	0.00176574	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v1_chr9_-_140484899_140484965	0.00175111	SOX2.p2	BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19	AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19	AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19	NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19
hg19_v1_chr6_+_42981840_42981954	0.0017477	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr4_+_184827882_184827940	0.00174677	SOX2.p2	
hg19_v1_chr18_+_39535211_39535256	0.00174302	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg19_v1_chr19_-_7701852_7701854	0.00174127	SOX2.p2	
hg19_v1_chr7_+_117120016_117120061	0.00174003	SOX2.p2	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg19_v1_chr4_-_165304406_165304406	0.00173006	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr3_+_155588447_155588463	0.00172839	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr3_+_9773439_9773461	0.00171724	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr7_+_63773185_63773185	0.00171719	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg19_v1_chr2_+_170590241_170590430	0.00171489	SOX2.p2	NM_144711|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr3_-_185641596_185641735	0.00170789	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr17_+_42785975_42786050	0.00168716	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr9_+_136293730_136293750	0.00166793	SOX2.p2	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13
hg19_v1_chr8_+_92082423_92082605	0.00166459	SOX2.p2	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg19_v1_chr3_-_150264280_150264427	0.00166392	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg19_v1_chr4_-_146859568_146859786	0.00166169	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg19_v1_chr19_-_44100127_44100298	0.00166114	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg19_v1_chr19_+_13135745_13135776	0.00165685	SOX2.p2	L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr3_-_167371701_167371746	0.00165482	SOX2.p2	AK097556|WDR49|151790|WD repeat domain 49
hg19_v1_chr9_-_132597540_132597559	0.0016467	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr12_-_10022457_10022457	0.00164454	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr2_-_153573858_153573983	0.0016384	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v1_chr5_+_132209354_132209359	0.00163606	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg19_v1_chr1_+_29063132_29063435	0.00163535	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr3_+_48956244_48956268	0.00163389	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg19_v1_chr11_-_59383616_59383616	0.00161912	SOX2.p2	AF185696|OSBP|5007|oxysterol binding protein	M86917|OSBP|5007|oxysterol binding protein	NM_002556|OSBP|5007|oxysterol binding protein
hg19_v1_chr5_-_60458228_60458306	0.00161873	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr3_+_134514300_134514302	0.00161648	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg19_v1_chr3_-_52312655_52312658	0.00161545	SOX2.p2	NM_025222|WDR82|80335|WD repeat domain 82
hg19_v1_chr3_+_126423037_126423118	0.00161001	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg19_v1_chr3_-_183602658_183602667	0.00160862	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr13_+_32420828_32420977	0.00160357	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg19_v1_chr17_+_42299282_42299409	0.00160243	SOX2.p2	
hg19_v1_chr12_-_11139510_11139510	0.00159129	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg19_v1_chr11_-_116658738_116658738	0.00159114	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr22_-_41682187_41682228	0.00158543	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr10_-_1779669_1779669	0.00158458	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg19_v1_chr10_+_26505593_26505738	0.00158437	SOX2.p2	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v1_chr1_+_50575465_50575612	0.00157631	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr1_-_33502464_33502469	0.00157518	SOX2.p2	AB005621|AK2|204|adenylate kinase 2
hg19_v1_chr6_-_89673270_89673346	0.00157417	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr2_+_166095911_166095954	0.00156535	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chr3_+_155588479_155588659	0.00155493	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr5_+_85913762_85913872	0.00154864	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr12_+_106976684_106976699	0.00154838	SOX2.p2	AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg19_v1_chr5_+_85913755_85913761	0.00154375	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr14_-_107013474_107013478	0.00154149	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr4_-_39979159_39979517	0.00153376	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr21_-_32253843_32253873	0.00152883	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg19_v1_chr17_-_79829272_79829284	0.00152751	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr1_-_225616556_225616556	0.00152036	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr17_-_79212775_79212872	0.00151112	SOX2.p2	AK128728|C17orf56|146705|chromosome 17 open reading frame 56	BC064483|C17orf56|146705|chromosome 17 open reading frame 56	BC042155|C17orf56|146705|chromosome 17 open reading frame 56	AK056090|C17orf56|146705|chromosome 17 open reading frame 56
hg19_v1_chr12_-_10151689_10151898	0.00150991	SOX2.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg19_v1_chr17_+_46125724_46125724	0.00150225	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr5_+_108084638_108084706	0.00149799	SOX2.p2	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase	BC058030|FER|2241|fer (fps/fes related) tyrosine kinase
hg19_v1_chr9_-_34612075_34612109	0.00149767	SOX2.p2	BC032136|C9orf23|138716|chromosome 9 open reading frame 23	NM_148178|C9orf23|138716|chromosome 9 open reading frame 23	NM_148179|C9orf23|138716|chromosome 9 open reading frame 23
hg19_v1_chr6_+_27775898_27775985	0.00149281	SOX2.p2	BC112254|HIST1H2AI|8329|histone cluster 1, H2ai	BC112256|HIST1H2AI|8329|histone cluster 1, H2ai	AK311766|HIST1H2AI|8329|histone cluster 1, H2ai	BC062305|HIST1H3F|8968|histone cluster 1, H3f	NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai	HQ258047|HIST1H2AM|8336|histone cluster 1, H2am
hg19_v1_chr16_+_2563993_2563999	0.00148844	SOX2.p2	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr9_-_128003348_128003613	0.00148166	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr3_-_183602668_183602689	0.00148141	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr6_-_137540551_137540566	0.00148036	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chr22_-_18256748_18256812	0.00147442	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_001244572|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg19_v1_chr10_+_104221158_104221207	0.00147051	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg19_v1_chr19_-_51568323_51568367	0.0014696	SOX2.p2	AB108823|KLK13|26085|kallikrein-related peptidase 13	AB108824|KLK13|26085|kallikrein-related peptidase 13	AB451465|KLK13|26085|kallikrein-related peptidase 13	AY923171|KLK13|26085|kallikrein-related peptidase 13	AY923172|KLK13|26085|kallikrein-related peptidase 13	AY923173|KLK13|26085|kallikrein-related peptidase 13	BC069334|KLK13|26085|kallikrein-related peptidase 13	BC069543|KLK13|26085|kallikrein-related peptidase 13	NM_015596|KLK13|26085|kallikrein-related peptidase 13	AL050220|KLK13|26085|kallikrein-related peptidase 13
hg19_v1_chr17_+_55333843_55334103	0.00146878	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg19_v1_chr22_+_20104810_20105027	0.00145543	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr6_+_144164472_144164507	0.00145343	SOX2.p2	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg19_v1_chr17_-_72527592_72527612	0.00144999	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg19_v1_chr22_-_33402648_33402805	0.00144841	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	HQ258468|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg19_v1_chr2_-_109150596_109150695	0.00144832	SOX2.p2	BC004487|FLJ38668|644903|uncharacterized LOC644903	AK095987|FLJ38668|644903|uncharacterized LOC644903
hg19_v1_chr1_-_154580677_154580723	0.00144588	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg19_v1_chrY_+_2803111_2803111	0.00141683	SOX2.p2	AK310553|ZFY|7544|zinc finger protein, Y-linked	NM_001145276|ZFY|7544|zinc finger protein, Y-linked
hg19_v1_chr6_+_34204663_34204679	0.00140915	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr10_+_60094712_60094961	0.00138077	SOX2.p2	NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1
hg19_v1_chr21_+_17102286_17102364	0.00137832	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr17_-_74068576_74068577	0.00137301	SOX2.p2	BC020238|SRP68|6730|signal recognition particle 68kDa	AK301100|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr9_-_100684770_100684851	0.00136788	SOX2.p2	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg19_v1_chr7_+_116502529_116502585	0.00135839	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr2_+_170590454_170590521	0.00135224	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr11_-_107729492_107729519	0.00135194	SOX2.p2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr4_-_39979549_39979637	0.00133816	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr19_+_41770349_41770527	0.00133055	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr2_-_128615691_128615704	0.00132991	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chrX_-_154842492_154842621	0.00132469	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg19_v1_chrX_-_99891690_99891847	0.0013189	SOX2.p2	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg19_v1_chr2_-_20512016_20512083	0.00131732	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr19_-_12834628_12834841	0.00130669	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg19_v1_chr6_-_108279307_108279318	0.00130341	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr11_+_61129407_61129740	0.00130147	SOX2.p2	NM_016464|TMEM138|51524|transmembrane protein 138
hg19_v1_chr4_+_68424444_68424527	0.00130022	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg19_v1_chr1_+_107599266_107599465	0.00129573	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg19_v1_chr8_+_99956630_99956685	0.00129535	SOX2.p2	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)	NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)	AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)	AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)	AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)	BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)	AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)
hg19_v1_chr9_-_86536283_86536495	0.0012899	SOX2.p2	AK297689|KIF27|55582|kinesin family member 27	BC140788|KIF27|55582|kinesin family member 27	AY237536|KIF27|55582|kinesin family member 27	AY237537|KIF27|55582|kinesin family member 27	AY237538|KIF27|55582|kinesin family member 27	NM_017576|KIF27|55582|kinesin family member 27
hg19_v1_chr19_-_20844312_20844412	0.00128843	SOX2.p2	AK096221|ZNF626|199777|zinc finger protein 626	CR749233|ZNF626|199777|zinc finger protein 626	BC007116|ZNF626|199777|zinc finger protein 626	BX648764|ZNF626|199777|zinc finger protein 626	BC107803|ZNF626|199777|zinc finger protein 626	NM_001076675|ZNF626|199777|zinc finger protein 626	NM_145297|ZNF626|199777|zinc finger protein 626
hg19_v1_chr3_+_85775631_85775631	0.00127134	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg19_v1_chr11_-_6704517_6704631	0.0012668	SOX2.p2	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg19_v1_chr1_+_50571963_50571963	0.00126519	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chrX_-_11683820_11683820	0.0012576	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr2_+_190649109_190649291	0.00125547	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr20_-_50179338_50179431	0.00123692	SOX2.p2	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v1_chr17_+_29158948_29159022	0.00123149	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg19_v1_chr17_-_73389708_73389847	0.00122981	SOX2.p2	AF498925|GRB2|2885|growth factor receptor-bound protein 2	CR450363|GRB2|2885|growth factor receptor-bound protein 2	CR541942|GRB2|2885|growth factor receptor-bound protein 2	DQ891830|GRB2|2885|growth factor receptor-bound protein 2	DQ894923|GRB2|2885|growth factor receptor-bound protein 2	L29511|GRB2|2885|growth factor receptor-bound protein 2
hg19_v1_chr4_+_184827805_184827836	0.00120979	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg19_v1_chr22_+_44422183_44422183	0.00120592	SOX2.p2	AK308443|PARVB|29780|parvin, beta	NM_001243386|PARVB|29780|parvin, beta
hg19_v1_chr5_+_61601944_61602002	0.00120525	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_001243952|KIF2A|3796|kinesin heavy chain member 2A	NM_001243953|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr2_+_160568973_160569017	0.00120436	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr3_+_52719935_52720108	0.00118976	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg19_v1_chr15_-_91565685_91565855	0.00118457	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg19_v1_chr10_-_81708860_81708860	0.00116964	SOX2.p2	BC022318|SFTPD|6441|surfactant protein D	NM_003019|SFTPD|6441|surfactant protein D
hg19_v1_chrX_+_122993536_122994348	0.00116951	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	NM_001204401|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg19_v1_chr7_+_106505876_106505982	0.00116791	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg19_v1_chr1_+_12834983_12834983	0.00116684	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg19_v1_chr2_+_181845605_181845681	0.00116255	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr16_+_1203240_1203412	0.00116095	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr19_+_57791794_57791981	0.00115766	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg19_v1_chr10_-_17171789_17171878	0.0011566	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr18_-_33709204_33709379	0.0011516	SOX2.p2	U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6
hg19_v1_chr17_-_26926015_26926038	0.0011357	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr3_-_183602690_183602726	0.00113218	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg19_v1_chr17_+_7311501_7311501	0.00112048	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg19_v1_chr10_-_123734641_123734702	0.00112024	SOX2.p2	
hg19_v1_chr11_+_71544245_71544245	0.00111851	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg19_v1_chr6_-_53213747_53213976	0.00111467	SOX2.p2	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5	AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5	AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr17_-_74068583_74068587	0.0011092	SOX2.p2	AK126258|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chrX_+_49217770_49217780	0.00110523	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894341|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chrX_-_48693934_48694057	0.00109815	SOX2.p2	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v1_chr1_-_242162364_242162384	0.0010937	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg19_v1_chr21_-_40685697_40685711	0.00109058	SOX2.p2	NM_001007246|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_018963|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_033656|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr10_+_99400469_99400499	0.00108872	SOX2.p2	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr6_-_13711952_13711996	0.00107095	SOX2.p2	BC052781|RANBP9|10048|RAN binding protein 9
hg19_v1_chr7_-_88425030_88425030	0.00106622	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg19_v1_chr4_-_111119752_111119819	0.00106293	SOX2.p2	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6	AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6
hg19_v1_chr22_+_20105076_20105093	0.00106162	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr9_+_117349993_117350083	0.00106156	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v1_chr22_-_20104745_20104792	0.00106011	SOX2.p2	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr7_-_135613197_135613244	0.00105463	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6
hg19_v1_chr2_+_160569027_160569054	0.00104205	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr22_+_20105095_20105118	0.00103947	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chr6_-_30655078_30655100	0.00103688	SOX2.p2	AB075829|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_001134870|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	AK125639|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr12_+_27863705_27863760	0.00103613	SOX2.p2	NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35	NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35	AF182422|MRPS35|60488|mitochondrial ribosomal protein S35
hg19_v1_chr2_+_84743576_84743578	0.00103314	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg19_v1_chrX_+_70752911_70752940	0.0010328	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chr17_-_1588130_1588178	0.00103005	SOX2.p2	BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg19_v1_chr14_+_20923341_20923355	0.00102887	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr16_+_23765947_23766091	0.00102467	SOX2.p2	AF146019|CHP2|63928|calcineurin B homologous protein 2	NM_022097|CHP2|63928|calcineurin B homologous protein 2	AK313062|CHP2|63928|calcineurin B homologous protein 2
hg19_v1_chr17_+_79651042_79651048	0.00101171	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr6_-_79787887_79787890	0.00100304	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr8_-_145050896_145050958	0.000992719	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg19_v1_chr1_+_43148048_43148073	0.000990737	SOX2.p2	NM_004559|YBX1|4904|Y box binding protein 1
hg19_v1_chr18_-_44702647_44702731	0.000990601	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr19_-_55691468_55691719	0.000978582	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg19_v1_chr8_-_18541441_18541624	0.000974153	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr12_-_52995215_52995321	0.00096329	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	HQ258454|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg19_v1_chr8_-_23261626_23261631	0.000962966	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr12_+_98909410_98909413	0.000952943	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr16_-_87799495_87799536	0.00095129	SOX2.p2	BC001044|KLHDC4|54758|kelch domain containing 4
hg19_v1_chrX_+_150863729_150863729	0.000948549	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg19_v1_chr12_-_21810733_21810752	0.000945885	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chrX_+_49326599_49326609	0.000944167	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr2_+_130737234_130737236	0.000939101	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg19_v1_chr17_-_74068582_74068582	0.000931425	SOX2.p2	AK074698|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr12_+_98909405_98909409	0.000925067	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr17_+_18128868_18129009	0.000924718	SOX2.p2	BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)
hg19_v1_chr19_+_18263967_18263995	0.000924496	SOX2.p2	
hg19_v1_chr1_-_78444690_78444763	0.00092101	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr7_-_95225802_95225924	0.000919437	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg19_v1_chr17_+_79651035_79651041	0.000916541	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr7_-_150780412_150780569	0.000913849	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg19_v1_chr1_-_226186987_226187017	0.000909967	SOX2.p2	BC016290|C1orf55|163859|chromosome 1 open reading frame 55
hg19_v1_chrX_+_24712063_24712067	0.000908829	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v1_chr13_+_45694585_45694644	0.000905843	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg19_v1_chr9_+_130026755_130026860	0.000904894	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg19_v1_chr15_-_52263947_52263978	0.000900701	SOX2.p2	BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v1_chr6_+_170615780_170615836	0.000893262	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr8_+_19796840_19796890	0.000888003	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg19_v1_chr3_+_109128836_109128836	0.000872081	SOX2.p2	AK058092|FLJ25363|401082|uncharacterized LOC401082	NM_001145553|FLJ25363|401082|uncharacterized LOC401082
hg19_v1_chr3_-_167813175_167813688	0.000869878	SOX2.p2	AK307718|GOLIM4|27333|golgi integral membrane protein 4	AK307557|GOLIM4|27333|golgi integral membrane protein 4	NM_014498|GOLIM4|27333|golgi integral membrane protein 4
hg19_v1_chr1_+_109419601_109419621	0.000868544	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr8_-_103876345_103876374	0.000852228	SOX2.p2	AK095493|AZIN1|51582|antizyme inhibitor 1	D88674|AZIN1|51582|antizyme inhibitor 1	BC013420|AZIN1|51582|antizyme inhibitor 1	BC019279|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr3_-_57583153_57583228	0.000850839	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr9_+_91926109_91926207	0.000849433	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr4_+_90033967_90033967	0.000848059	SOX2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg19_v1_chr6_-_33168163_33168253	0.00084325	SOX2.p2	BT007280|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr9_-_128003634_128003794	0.000838321	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr7_-_126892304_126892427	0.000837696	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr9_-_21994379_21994399	0.000833855	SOX2.p2	BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg19_v1_chr4_+_5053464_5053590	0.000833787	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr1_-_185125819_185126116	0.000831134	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg19_v1_chr4_+_155702426_155702499	0.000819494	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg19_v1_chr7_+_72742154_72742430	0.000815553	SOX2.p2	NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa	AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa	NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa	AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa	BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa	AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa
hg19_v1_chr11_-_129817300_129817516	0.000808774	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg19_v1_chr7_+_27779706_27779742	0.000807099	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr16_+_2564000_2564104	0.000802661	SOX2.p2	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr10_-_50396380_50396473	0.000793508	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg19_v1_chr1_+_156182765_156182824	0.000782406	SOX2.p2	NM_001199653|PMF1|11243|polyamine-modulated factor 1	NM_001199654|PMF1|11243|polyamine-modulated factor 1	NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK124646|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg19_v1_chr6_-_84140651_84140734	0.000778205	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr16_+_57496574_57496636	0.000776792	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr7_-_99774821_99775034	0.00077498	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg19_v1_chr11_-_63684570_63684709	0.000766946	SOX2.p2	AB593132|RCOR2|283248|REST corepressor 2
hg19_v1_chr7_-_29186072_29186154	0.000764292	SOX2.p2	AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like	AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like	AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like	BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like	AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like
hg19_v1_chr15_+_74218811_74218819	0.000758056	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr16_+_31724530_31724563	0.000756728	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg19_v1_chr10_-_120514277_120514298	0.000755859	SOX2.p2	
hg19_v1_chr2_+_63277936_63277995	0.000753071	SOX2.p2	NM_014562|OTX1|5013|orthodenticle homeobox 1	AK095680|OTX1|5013|orthodenticle homeobox 1	AK297308|OTX1|5013|orthodenticle homeobox 1	BC007621|OTX1|5013|orthodenticle homeobox 1
hg19_v1_chr1_+_161129229_161129287	0.000750391	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr1_+_192544856_192544961	0.000722714	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1
hg19_v1_chr6_+_126661221_126661319	0.000720209	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr8_-_23261591_23261612	0.000719688	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr2_-_132121730_132121730	0.000710653	SOX2.p2	NM_001077637|WTH3DI|150786|RAB6C-like
hg19_v1_chr14_-_35344080_35344137	0.000703758	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr1_+_155108343_155108387	0.000699	SOX2.p2	BC005943|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC010869|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC069245|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	CR457148|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg19_v1_chr1_-_111148974_111148990	0.000697694	SOX2.p2	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg19_v1_chr14_-_54908035_54908197	0.000694454	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr1_+_76540374_76540550	0.000689917	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v1_chr15_-_65281771_65281847	0.00068891	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr1_-_52344433_52344608	0.000688623	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr1_+_150266261_150266340	0.000685987	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg19_v1_chr2_-_172967014_172967055	0.00068541	SOX2.p2	L07919|DLX2|1746|distal-less homeobox 2
hg19_v1_chr17_+_46125675_46125723	0.000674946	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr19_+_35531409_35531409	0.00066859	SOX2.p2	M18930|HPN|3249|hepsin	NM_002151|HPN|3249|hepsin	NM_182983|HPN|3249|hepsin	X07732|HPN|3249|hepsin
hg19_v1_chr15_-_65282227_65282265	0.000666155	SOX2.p2	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr2_-_45838383_45838432	0.000661358	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg19_v1_chr15_-_65477441_65477562	0.000651348	SOX2.p2	BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr11_-_7041465_7041585	0.000651262	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg19_v1_chr7_+_139025104_139025240	0.000650454	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg19_v1_chr1_-_149814264_149814317	0.000648956	SOX2.p2	BC096705|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC096739|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC098171|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR536525|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR541872|HIST2H2AA3|8337|histone cluster 2, H2aa3	EU831480|HIST2H2AA4|723790|histone cluster 2, H2aa4	EU831567|HIST2H2AA4|723790|histone cluster 2, H2aa4	BC001629|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC019308|HIST2H2AA3|8337|histone cluster 2, H2aa3	AK312163|HIST2H2AA3|8337|histone cluster 2, H2aa3	L19779|HIST2H2AA3|8337|histone cluster 2, H2aa3	NM_001040874|HIST2H2AA4|723790|histone cluster 2, H2aa4	NM_003516|HIST2H2AA3|8337|histone cluster 2, H2aa3
hg19_v1_chr1_-_108742738_108742802	0.000637842	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr6_+_123100645_123100753	0.000634444	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr1_-_240775448_240775461	0.000629944	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg19_v1_chr17_+_7591666_7591804	0.000627709	SOX2.p2	AY766323|WRAP53|55135|WD repeat containing, antisense to TP53	DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53	NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53	NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53	AK001247|WRAP53|55135|WD repeat containing, antisense to TP53	AK225273|WRAP53|55135|WD repeat containing, antisense to TP53	AK225411|WRAP53|55135|WD repeat containing, antisense to TP53	AK303246|WRAP53|55135|WD repeat containing, antisense to TP53	BC002336|WRAP53|55135|WD repeat containing, antisense to TP53
hg19_v1_chr15_+_74218794_74218809	0.000627355	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr5_-_101631965_101632252	0.000621756	SOX2.p2	AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1
hg19_v1_chr4_+_72204769_72204965	0.000619262	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr2_+_203500211_203500263	0.0006179	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr3_+_45730914_45730957	0.00061389	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v1_chr6_-_31628509_31628566	0.000607139	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg19_v1_chr12_-_6961044_6961229	0.000602434	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr9_+_109625347_109625381	0.000598311	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg19_v1_chr5_+_137688270_137688291	0.000595301	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr2_+_190648810_190648810	0.00058375	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr7_+_2598676_2598703	0.000582046	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg19_v1_chr1_-_115259433_115259514	0.000580384	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr17_-_26926044_26926071	0.00057778	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr12_-_10282680_10282867	0.000574329	SOX2.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg19_v1_chr3_-_156272868_156272895	0.000571369	SOX2.p2	BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v1_chr2_+_207024330_207024468	0.000567712	SOX2.p2	S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr4_+_48343338_48343485	0.000565862	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg19_v1_chr12_-_21810769_21810778	0.000563431	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr17_-_1588098_1588118	0.000558345	SOX2.p2	AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg19_v1_chr19_-_50266514_50266542	0.000557619	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg19_v1_chr16_+_31724577_31724626	0.000555845	SOX2.p2	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg19_v1_chr17_+_46125725_46125780	0.000551481	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr11_-_45939568_45939673	0.000550067	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg19_v1_chr11_-_8190535_8190592	0.000547995	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg19_v1_chr10_-_128077062_128077066	0.000545249	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr4_-_151936377_151936459	0.000543368	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr1_+_29063443_29063632	0.00054151	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr10_-_123734708_123734812	0.000541169	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg19_v1_chr16_+_27561441_27561487	0.000534482	SOX2.p2	NM_015202|KIAA0556|23247|KIAA0556	AB011128|KIAA0556|23247|KIAA0556	BC150276|KIAA0556|23247|KIAA0556	BC131508|KIAA0556|23247|KIAA0556
hg19_v1_chr14_-_21852424_21852424	0.000531397	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr1_-_76081693_76081799	0.000527241	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg19_v1_chr8_-_23261632_23261666	0.000513372	SOX2.p2	AK222477|LOXL2|4017|lysyl oxidase-like 2	AK312266|LOXL2|4017|lysyl oxidase-like 2	BC020481|LOXL2|4017|lysyl oxidase-like 2	AK293292|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr4_-_54930466_54930587	0.00050484	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chrX_+_142967172_142967172	0.000504349	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr19_-_55690717_55690757	0.000500251	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg19_v1_chr5_+_140797210_140797222	0.000496662	SOX2.p2	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr6_-_42713837_42713914	0.000490607	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr6_+_170615849_170615911	0.000489932	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr18_+_33552587_33552747	0.000486415	SOX2.p2	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21	NM_031446|C18orf21|83608|chromosome 18 open reading frame 21	BC108730|C18orf21|83608|chromosome 18 open reading frame 21	BC119765|C18orf21|83608|chromosome 18 open reading frame 21	BC119766|C18orf21|83608|chromosome 18 open reading frame 21	AF277182|C18orf21|83608|chromosome 18 open reading frame 21	AF277189|C18orf21|83608|chromosome 18 open reading frame 21	BC025950|C18orf21|83608|chromosome 18 open reading frame 21
hg19_v1_chr16_+_2563675_2563893	0.000484726	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr8_-_7673137_7673237	0.000470329	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg19_v1_chr5_+_152870083_152870448	0.000468712	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg19_v1_chr12_-_21810754_21810766	0.000467705	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr19_-_50432952_50433054	0.000461074	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr11_-_71823737_71823825	0.000459619	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr7_+_91924291_91924419	0.000454347	SOX2.p2	
hg19_v1_chr1_-_44173010_44173037	0.000450769	SOX2.p2	BC094867|LOC100132774|100132774|uncharacterized LOC100132774
hg19_v1_chr3_+_183415540_183415704	0.00044943	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg19_v1_chr1_+_43148098_43148102	0.000448248	SOX2.p2	BC070084|YBX1|4904|Y box binding protein 1
hg19_v1_chr2_+_219646704_219647079	0.000444676	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr1_+_53527723_53527759	0.000442741	SOX2.p2	NM_001199080|PODN|127435|podocan	NM_001199082|PODN|127435|podocan	NM_153703|PODN|127435|podocan
hg19_v1_chr12_+_32112381_32112407	0.000432653	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg19_v1_chr19_-_2015628_2015713	0.000429577	SOX2.p2	AF355797|BTBD2|55643|BTB (POZ) domain containing 2	NM_017797|BTBD2|55643|BTB (POZ) domain containing 2	AK225831|BTBD2|55643|BTB (POZ) domain containing 2
hg19_v1_chr6_-_39282095_39282236	0.000425894	SOX2.p2	AF358910|KCNK17|89822|potassium channel, subfamily K, member 17	DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17	DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17	EU978944|KCNK17|89822|potassium channel, subfamily K, member 17	BC025726|KCNK17|89822|potassium channel, subfamily K, member 17	AY358853|KCNK17|89822|potassium channel, subfamily K, member 17	AF339912|KCNK17|89822|potassium channel, subfamily K, member 17	AK310582|KCNK17|89822|potassium channel, subfamily K, member 17	AK315273|KCNK17|89822|potassium channel, subfamily K, member 17	NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17	NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17
hg19_v1_chr11_-_107729913_107729913	0.000422947	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg19_v1_chr4_-_83931973_83932016	0.000418662	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg19_v1_chr2_+_70314734_70314760	0.000418106	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr17_-_55927377_55927432	0.000414903	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg19_v1_chr1_+_43148096_43148097	0.000408919	SOX2.p2	AK309996|YBX1|4904|Y box binding protein 1	AK311708|YBX1|4904|Y box binding protein 1
hg19_v1_chr7_-_27187367_27187392	0.000404513	SOX2.p2	BC069497|HOXA6|3203|homeobox A6	BC104915|HOXA6|3203|homeobox A6	BC104917|HOXA6|3203|homeobox A6	NM_024014|HOXA6|3203|homeobox A6
hg19_v1_chrX_+_48334400_48334694	0.000397906	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg19_v1_chr17_+_7487153_7487180	0.00039602	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr6_-_131949188_131949386	0.000393794	SOX2.p2	AF135022|MED23|9439|mediator complex subunit 23	AM393572|MED23|9439|mediator complex subunit 23	EU832308|MED23|9439|mediator complex subunit 23	EU832392|MED23|9439|mediator complex subunit 23	EU392526|MED23|9439|mediator complex subunit 23	EU392528|MED23|9439|mediator complex subunit 23	EU392529|MED23|9439|mediator complex subunit 23	EU392530|MED23|9439|mediator complex subunit 23	EU392531|MED23|9439|mediator complex subunit 23	AK315030|MED23|9439|mediator complex subunit 23	AF105332|MED23|9439|mediator complex subunit 23	EU392520|MED23|9439|mediator complex subunit 23	EU392522|MED23|9439|mediator complex subunit 23	EU392527|MED23|9439|mediator complex subunit 23	EU392532|MED23|9439|mediator complex subunit 23	BC060759|MED23|9439|mediator complex subunit 23	AF104255|MED23|9439|mediator complex subunit 23	AL136776|MED23|9439|mediator complex subunit 23	AB033042|MED23|9439|mediator complex subunit 23	BC007088|MED23|9439|mediator complex subunit 23	NM_004830|MED23|9439|mediator complex subunit 23	NM_015979|MED23|9439|mediator complex subunit 23
hg19_v1_chr6_-_84140744_84140753	0.000392858	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr19_+_50191920_50191941	0.000389624	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr7_+_23530136_23530198	0.000388248	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chr6_-_32119667_32119699	0.000383701	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr6_+_170615838_170615848	0.000378652	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr16_+_57496548_57496568	0.000378609	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr21_-_46293598_46293608	0.000371209	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg19_v1_chr17_+_41924515_41924584	0.000362792	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg19_v1_chr1_+_181452685_181452715	0.000358787	SOX2.p2	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v1_chr2_+_47168362_47168444	0.000356207	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg19_v1_chr17_+_30677138_30677175	0.000350964	SOX2.p2	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg19_v1_chr17_+_79981187_79981279	0.000342499	SOX2.p2	BC014109|LRRC45|201255|leucine rich repeat containing 45	NM_144999|LRRC45|201255|leucine rich repeat containing 45
hg19_v1_chr13_+_113656050_113656067	0.000333157	SOX2.p2	BC011853|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	BC020208|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr5_-_40835325_40835386	0.000330857	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg19_v1_chr12_-_371994_372038	0.000323934	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg19_v1_chr3_-_129158779_129158816	0.000318927	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr2_-_55277421_55277441	0.000318647	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg19_v1_chr17_+_61627976_61628049	0.000317642	SOX2.p2	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr5_+_132428394_132428412	0.000316474	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr8_-_33370552_33370702	0.000309794	SOX2.p2	AK026916|TTI2|80185|TELO2 interacting protein 2	BX648410|TTI2|80185|TELO2 interacting protein 2	BC007387|TTI2|80185|TELO2 interacting protein 2	BC066935|TTI2|80185|TELO2 interacting protein 2	NM_025115|TTI2|80185|TELO2 interacting protein 2	NM_001102401|TTI2|80185|TELO2 interacting protein 2
hg19_v1_chrX_+_48114796_48114809	0.000309786	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg19_v1_chr1_-_115300615_115300670	0.000309778	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr12_-_21810720_21810732	0.000308581	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr14_+_73603140_73603159	0.000308392	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg19_v1_chr16_+_67063035_67063059	0.000307407	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr5_-_40835283_40835323	0.000306007	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg19_v1_chr10_-_105110844_105110876	0.000298432	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr6_-_32119717_32119723	0.000298352	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr16_+_58498216_58498308	0.000295429	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr12_+_56435685_56435721	0.00027481	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg19_v1_chr14_+_67827087_67827147	0.000273335	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr4_-_69536314_69536493	0.000273107	SOX2.p2	U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v1_chr11_-_63684315_63684315	0.000269884	SOX2.p2	BC023587|RCOR2|283248|REST corepressor 2	NM_173587|RCOR2|283248|REST corepressor 2
hg19_v1_chr9_-_86595167_86595183	0.000264599	SOX2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr2_+_219646448_219646500	0.000253609	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr12_-_72057676_72057748	0.000250365	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr18_-_21017816_21017926	0.000248261	SOX2.p2	AK303553|TMEM241|85019|transmembrane protein 241	BC114510|TMEM241|85019|transmembrane protein 241	BC114561|TMEM241|85019|transmembrane protein 241	AK294916|TMEM241|85019|transmembrane protein 241	AK123623|TMEM241|85019|transmembrane protein 241	AK126247|TMEM241|85019|transmembrane protein 241	NM_032933|TMEM241|85019|transmembrane protein 241
hg19_v1_chr4_+_6717899_6717945	0.000245197	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr1_-_41487386_41487426	0.000244983	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg19_v1_chr10_+_104263716_104263723	0.000235036	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg19_v1_chr5_+_99871023_99871123	0.000232373	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr11_-_17498322_17498365	0.000228523	SOX2.p2	U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr10_+_127408083_127408144	0.000221849	SOX2.p2	BC026172|C10orf137|26098|chromosome 10 open reading frame 137	NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137	NM_015608|C10orf137|26098|chromosome 10 open reading frame 137	BC028715|C10orf137|26098|chromosome 10 open reading frame 137	BC105929|C10orf137|26098|chromosome 10 open reading frame 137	BC107479|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr17_+_79650961_79651022	0.000213425	SOX2.p2	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr13_-_38443859_38443938	0.000211929	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg19_v1_chr11_-_76091866_76092151	0.000209557	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v1_chr3_-_129158675_129158761	0.000208514	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr2_+_237478379_237478477	0.000205461	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg19_v1_chr4_-_54930771_54930824	0.00020255	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr15_+_22955754_22955754	0.00019757	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr17_-_79980685_79980777	0.00019473	SOX2.p2	BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)
hg19_v1_chrX_-_103174121_103174147	0.000194089	SOX2.p2	AK026512|LOC100128594|100128594|uncharacterized LOC100128594
hg19_v1_chr1_+_110560111_110560144	0.000190153	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr10_+_102729249_102729303	0.000176476	SOX2.p2	BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr3_+_47844627_47844685	0.000174683	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr4_-_71705188_71705219	0.000174117	SOX2.p2	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1	NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1
hg19_v1_chr10_-_128077011_128077051	0.000172857	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg19_v1_chr1_-_1510260_1510284	0.000165762	SOX2.p2	NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
hg19_v1_chr12_+_66583029_66583078	0.000162867	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr14_-_36988902_36988902	0.000160573	SOX2.p2	NM_003317|NKX2-1|7080|NK2 homeobox 1	U33749|NKX2-1|7080|NK2 homeobox 1
hg19_v1_chr8_+_61429724_61429777	0.000158435	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr19_-_56135934_56135990	0.000157976	SOX2.p2	BC065822|ZNF784|147808|zinc finger protein 784	NM_203374|ZNF784|147808|zinc finger protein 784
hg19_v1_chr6_+_142468415_142468430	0.000152207	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr1_-_151319674_151319702	0.000149646	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg19_v1_chr19_+_18530423_18530457	0.000147168	SOX2.p2	
hg19_v1_chr19_+_57791281_57791431	0.000142807	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg19_v1_chr2_+_70314560_70314629	0.000141976	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chrX_+_37850069_37850092	0.000135447	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg19_v1_chr1_-_85741992_85742279	0.0001293	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr1_-_52344377_52344400	0.000126097	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr19_+_52839497_52839610	0.000120002	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg19_v1_chr12_+_53846086_53846147	0.000118117	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr4_+_3371723_3371723	0.000113637	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr10_-_73848263_73848274	0.000107506	SOX2.p2	AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr3_+_127634317_127634319	0.000101382	SOX2.p2	AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg19_v1_chr2_+_70314903_70314932	9.89048e-05	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr17_+_80416606_80416679	9.82713e-05	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr12_-_7079616_7079827	9.80221e-05	SOX2.p2	DQ891808|PHB2|11331|prohibitin 2	EU176626|PHB2|11331|prohibitin 2	BC014766|PHB2|11331|prohibitin 2	BC013228|PHB2|11331|prohibitin 2	AF178980|PHB2|11331|prohibitin 2	AF150962|PHB2|11331|prohibitin 2
hg19_v1_chr1_-_153895450_153895452	9.25179e-05	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg19_v1_chrX_+_47053271_47053296	9.23674e-05	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg19_v1_chr10_-_123687936_123688064	9.15612e-05	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg19_v1_chr15_+_80352488_80352513	9.06744e-05	SOX2.p2	NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr6_-_42713822_42713835	8.57159e-05	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr10_+_104005307_104005427	8.24385e-05	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg19_v1_chr15_+_42840991_42841067	7.81995e-05	SOX2.p2	NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2	NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2	BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2
hg19_v1_chr1_+_12185955_12186077	7.38365e-05	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg19_v1_chr2_-_198299766_198299804	6.73477e-05	SOX2.p2	BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg19_v1_chr9_-_95087619_95087632	6.58986e-05	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg19_v1_chr1_+_43148105_43148125	6.4938e-05	SOX2.p2	BC098435|YBX1|4904|Y box binding protein 1	Z70765|YBX1|4904|Y box binding protein 1	BC106045|YBX1|4904|Y box binding protein 1	J03827|YBX1|4904|Y box binding protein 1	BC065571|YBX1|4904|Y box binding protein 1	BC071708|YBX1|4904|Y box binding protein 1	BC072014|YBX1|4904|Y box binding protein 1	BC090038|YBX1|4904|Y box binding protein 1	BC038384|YBX1|4904|Y box binding protein 1	BC000064|YBX1|4904|Y box binding protein 1	BC010430|YBX1|4904|Y box binding protein 1	BC002411|YBX1|4904|Y box binding protein 1	M24070|YBX1|4904|Y box binding protein 1
hg19_v1_chr6_-_108582307_108582463	6.24547e-05	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chr12_+_79258448_79258502	6.17616e-05	SOX2.p2	AK126908|SYT1|6857|synaptotagmin I	NM_005639|SYT1|6857|synaptotagmin I
hg19_v1_chr2_+_219081864_219081874	5.88184e-05	SOX2.p2	NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr6_-_18155283_18155373	5.29372e-05	SOX2.p2	S62904|TPMT|7172|thiopurine S-methyltransferase	AK310420|TPMT|7172|thiopurine S-methyltransferase	U12387|TPMT|7172|thiopurine S-methyltransferase	BC005339|TPMT|7172|thiopurine S-methyltransferase	BC009596|TPMT|7172|thiopurine S-methyltransferase	NM_000367|TPMT|7172|thiopurine S-methyltransferase
hg19_v1_chr6_+_43149905_43149924	5.00647e-05	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg19_v1_chr1_-_23885916_23886053	4.79642e-05	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr15_+_74218786_74218792	4.69875e-05	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr2_+_172821874_172822000	4.60255e-05	SOX2.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr14_-_64761077_64761127	4.32752e-05	SOX2.p2	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)	AF051428|ESR2|2100|estrogen receptor 2 (ER beta)	AF060555|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)
hg19_v1_chr18_+_77794345_77794588	4.05605e-05	SOX2.p2	AK307212|RBFA|79863|ribosome binding factor A (putative)	NM_001171967|RBFA|79863|ribosome binding factor A (putative)	NM_024805|RBFA|79863|ribosome binding factor A (putative)	AK024825|RBFA|79863|ribosome binding factor A (putative)	AK311463|RBFA|79863|ribosome binding factor A (putative)	AK311239|RBFA|79863|ribosome binding factor A (putative)	AF261073|RBFA|79863|ribosome binding factor A (putative)	AF439745|RBFA|79863|ribosome binding factor A (putative)	BC057772|RBFA|79863|ribosome binding factor A (putative)	BC014195|RBFA|79863|ribosome binding factor A (putative)
hg19_v1_chr19_-_39523132_39523334	3.75636e-05	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27
hg19_v1_chr17_-_73127787_73127928	3.73415e-05	SOX2.p2	BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic	AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic	AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic
hg19_v1_chr1_+_111992105_111992127	3.39459e-05	SOX2.p2	BC005960|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AY871272|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK313541|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK223018|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v1_chrX_+_27826106_27826124	2.17357e-05	SOX2.p2	AK057527|MAGEB10|139422|melanoma antigen family B, 10	NM_182506|MAGEB10|139422|melanoma antigen family B, 10	BC101307|MAGEB10|139422|melanoma antigen family B, 10	BC101309|MAGEB10|139422|melanoma antigen family B, 10	BC101310|MAGEB10|139422|melanoma antigen family B, 10
hg19_v1_chr12_-_7079828_7079923	2.06539e-05	SOX2.p2	AK298217|PHB2|11331|prohibitin 2	AK301316|PHB2|11331|prohibitin 2	AF126021|PHB2|11331|prohibitin 2	NM_007273|PHB2|11331|prohibitin 2	BC110322|PHB2|11331|prohibitin 2	NM_001144831|PHB2|11331|prohibitin 2
hg19_v1_chr18_+_21269404_21269424	1.10576e-05	SOX2.p2	AK096422|LAMA3|3909|laminin, alpha 3
hg19_v1_chr2_-_198299722_198299737	1.01841e-05	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
